Query 004218
Match_columns 767
No_of_seqs 863 out of 5976
Neff 10.1
Searched_HMMs 46136
Date Thu Mar 28 19:35:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004218.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004218hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 5.6E-86 1.2E-90 794.7 53.2 709 1-755 211-955 (968)
2 KOG1187 Serine/threonine prote 100.0 1.1E-48 2.4E-53 407.1 24.3 290 441-753 61-354 (361)
3 KOG0581 Mitogen-activated prot 100.0 9E-48 2E-52 374.2 18.0 247 457-747 81-335 (364)
4 KOG0192 Tyrosine kinase specif 100.0 1E-45 2.2E-50 381.1 23.9 263 458-760 44-312 (362)
5 KOG0615 Serine/threonine prote 100.0 1.1E-46 2.4E-51 368.4 14.9 254 453-747 170-437 (475)
6 KOG0575 Polo-like serine/threo 100.0 3.6E-46 7.7E-51 384.3 17.7 247 455-747 18-269 (592)
7 KOG0591 NIMA (never in mitosis 100.0 1.6E-47 3.5E-52 355.4 6.5 261 455-750 19-284 (375)
8 KOG0595 Serine/threonine-prote 100.0 8.3E-46 1.8E-50 363.2 17.4 203 453-676 8-219 (429)
9 PLN00113 leucine-rich repeat r 100.0 9.5E-44 2.1E-48 428.4 26.8 375 1-384 187-585 (968)
10 KOG0593 Predicted protein kina 100.0 9.6E-45 2.1E-49 340.4 11.8 272 455-747 2-284 (396)
11 KOG0598 Ribosomal protein S6 k 100.0 4.1E-44 9E-49 348.7 15.8 201 454-674 24-228 (357)
12 KOG0197 Tyrosine kinases [Sign 100.0 9.2E-44 2E-48 363.3 17.3 257 456-754 207-464 (468)
13 KOG0198 MEKK and related serin 100.0 4.1E-43 9E-48 349.7 16.4 264 454-753 16-282 (313)
14 KOG0592 3-phosphoinositide-dep 100.0 6.1E-43 1.3E-47 353.9 15.2 257 451-748 69-339 (604)
15 KOG0578 p21-activated serine/t 100.0 7.5E-43 1.6E-47 356.8 15.7 250 455-747 273-523 (550)
16 KOG0582 Ste20-like serine/thre 100.0 1.7E-42 3.8E-47 342.3 17.0 265 454-747 25-293 (516)
17 KOG0600 Cdc2-related protein k 100.0 5.8E-42 1.3E-46 343.9 17.5 264 455-747 117-400 (560)
18 KOG0661 MAPK related serine/th 100.0 3.5E-43 7.5E-48 350.0 8.5 263 453-748 8-292 (538)
19 KOG0659 Cdk activating kinase 100.0 5.3E-42 1.1E-46 316.8 14.6 270 455-747 2-281 (318)
20 KOG0616 cAMP-dependent protein 100.0 1.6E-41 3.5E-46 318.3 15.1 199 455-676 44-246 (355)
21 KOG0597 Serine-threonine prote 100.0 1.2E-41 2.6E-46 344.2 13.4 247 455-747 2-251 (808)
22 KOG1026 Nerve growth factor re 100.0 2.3E-41 5.1E-46 362.7 16.4 266 454-755 485-766 (774)
23 KOG0583 Serine/threonine prote 100.0 1.2E-40 2.6E-45 347.5 20.8 250 452-746 14-274 (370)
24 KOG2345 Serine/threonine prote 100.0 1.2E-41 2.7E-46 311.1 11.4 273 452-751 18-300 (302)
25 KOG0193 Serine/threonine prote 100.0 1.4E-41 3E-46 348.2 12.9 270 446-755 383-657 (678)
26 KOG0201 Serine/threonine prote 100.0 4.9E-42 1.1E-46 339.3 8.3 250 454-747 12-263 (467)
27 KOG0588 Serine/threonine prote 100.0 4.2E-41 9E-46 347.6 14.7 249 454-748 11-264 (786)
28 KOG0663 Protein kinase PITSLRE 100.0 6.9E-41 1.5E-45 318.8 14.9 202 455-674 76-281 (419)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.6E-40 5.6E-45 350.6 21.0 267 453-753 5-336 (338)
30 KOG0660 Mitogen-activated prot 100.0 3.6E-41 7.8E-46 326.7 13.1 284 451-748 18-311 (359)
31 KOG3653 Transforming growth fa 100.0 3.1E-40 6.6E-45 328.8 17.9 283 454-757 209-509 (534)
32 KOG4721 Serine/threonine prote 100.0 3.3E-41 7.2E-46 340.7 10.9 252 444-756 120-373 (904)
33 KOG0585 Ca2+/calmodulin-depend 100.0 1.8E-40 3.9E-45 330.1 14.6 262 451-750 93-375 (576)
34 KOG0605 NDR and related serine 100.0 7.1E-40 1.5E-44 332.2 18.1 213 451-677 137-394 (550)
35 KOG0658 Glycogen synthase kina 100.0 7.1E-41 1.5E-45 325.3 8.6 264 456-747 25-306 (364)
36 PHA02988 hypothetical protein; 100.0 7.7E-39 1.7E-43 329.3 23.2 264 442-753 12-281 (283)
37 KOG0611 Predicted serine/threo 100.0 5.2E-40 1.1E-44 319.4 13.4 247 454-748 52-304 (668)
38 KOG1989 ARK protein kinase fam 100.0 9.7E-40 2.1E-44 352.3 16.5 271 453-755 35-315 (738)
39 KOG4194 Membrane glycoprotein 100.0 4.4E-41 9.5E-46 341.3 3.7 372 4-385 80-454 (873)
40 KOG0580 Serine/threonine prote 100.0 8.9E-40 1.9E-44 297.7 11.7 250 453-747 20-273 (281)
41 KOG0033 Ca2+/calmodulin-depend 100.0 3.6E-41 7.9E-46 306.7 2.0 251 453-748 9-268 (355)
42 cd07862 STKc_CDK6 Catalytic do 100.0 5.5E-39 1.2E-43 333.0 18.5 276 455-747 1-287 (290)
43 KOG0196 Tyrosine kinase, EPH ( 100.0 4E-40 8.6E-45 345.3 8.9 258 456-753 630-893 (996)
44 KOG2052 Activin A type IB rece 100.0 8.5E-39 1.8E-43 316.1 17.7 280 447-753 203-505 (513)
45 KOG0694 Serine/threonine prote 100.0 6.2E-39 1.3E-43 334.6 17.1 203 452-675 365-572 (694)
46 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-38 3.4E-43 340.1 20.4 263 454-751 34-374 (375)
47 cd05106 PTKc_CSF-1R Catalytic 100.0 1.3E-38 2.9E-43 340.2 19.4 265 453-752 36-373 (374)
48 KOG0594 Protein kinase PCTAIRE 100.0 8.6E-39 1.9E-43 311.9 16.3 210 455-676 11-226 (323)
49 KOG0589 Serine/threonine prote 100.0 5.4E-39 1.2E-43 327.7 14.7 252 455-747 4-258 (426)
50 KOG1095 Protein tyrosine kinas 100.0 1.5E-38 3.3E-43 353.9 19.5 267 455-757 692-967 (1025)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.4E-38 3E-43 337.9 18.3 277 456-747 1-290 (338)
52 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-38 2.5E-43 330.0 17.2 245 455-747 1-254 (291)
53 KOG0194 Protein tyrosine kinas 100.0 6.2E-39 1.3E-43 334.0 15.1 259 455-756 157-425 (474)
54 cd05571 STKc_PKB Catalytic dom 100.0 1.9E-38 4.2E-43 333.2 19.1 242 461-747 1-251 (323)
55 cd05631 STKc_GRK4 Catalytic do 100.0 2.8E-38 6E-43 326.3 19.9 252 456-747 1-261 (285)
56 KOG0599 Phosphorylase kinase g 100.0 3.6E-39 7.7E-44 298.2 11.4 258 449-748 11-284 (411)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 3.7E-38 8.1E-43 332.3 20.4 199 454-673 4-204 (331)
58 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.1E-38 1.1E-42 321.1 19.7 256 454-751 4-265 (266)
59 PTZ00263 protein kinase A cata 100.0 2.5E-38 5.5E-43 333.1 17.8 245 455-747 18-271 (329)
60 cd05096 PTKc_DDR1 Catalytic do 100.0 5.4E-38 1.2E-42 327.7 20.1 267 454-749 4-303 (304)
61 KOG4279 Serine/threonine prote 100.0 4.4E-39 9.5E-44 332.1 11.2 246 462-746 582-831 (1226)
62 cd07848 STKc_CDKL5 Catalytic d 100.0 4.9E-38 1.1E-42 325.4 19.2 274 455-747 1-284 (287)
63 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.9E-38 6.2E-43 333.9 17.4 252 455-747 1-257 (333)
64 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.6E-38 7.9E-43 325.9 17.5 200 455-674 5-207 (288)
65 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.4E-37 3.1E-42 316.1 20.6 251 455-748 4-255 (256)
66 KOG0610 Putative serine/threon 100.0 4.8E-38 1.1E-42 308.5 16.3 270 455-761 77-408 (459)
67 cd05049 PTKc_Trk Catalytic dom 100.0 1.2E-37 2.5E-42 321.5 19.7 260 454-749 4-279 (280)
68 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.1E-38 1.8E-42 326.0 18.7 201 454-674 4-207 (303)
69 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.6E-38 1.9E-42 318.9 18.4 257 452-750 3-260 (261)
70 cd06650 PKc_MEK1 Catalytic dom 100.0 1.6E-37 3.5E-42 327.3 20.9 200 454-674 4-205 (333)
71 KOG4194 Membrane glycoprotein 100.0 1E-39 2.2E-44 331.5 3.8 352 1-363 101-455 (873)
72 cd05093 PTKc_TrkB Catalytic do 100.0 2E-37 4.3E-42 320.7 20.9 264 455-754 5-282 (288)
73 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-37 3.1E-42 327.0 20.1 242 461-747 1-251 (328)
74 cd05595 STKc_PKB_beta Catalyti 100.0 1.3E-37 2.9E-42 326.6 19.9 242 461-747 1-251 (323)
75 cd05054 PTKc_VEGFR Catalytic d 100.0 1.6E-37 3.5E-42 327.4 20.5 266 454-753 6-335 (337)
76 cd05072 PTKc_Lyn Catalytic dom 100.0 1.6E-37 3.5E-42 316.8 19.7 255 454-750 5-260 (261)
77 KOG0574 STE20-like serine/thre 100.0 2.8E-40 6.2E-45 309.2 -0.6 249 456-747 34-283 (502)
78 PHA03212 serine/threonine kina 100.0 1.4E-37 3E-42 333.2 19.9 194 454-673 91-285 (391)
79 cd05075 PTKc_Axl Catalytic dom 100.0 3.7E-37 8E-42 316.3 22.2 264 457-751 1-271 (272)
80 cd05585 STKc_YPK1_like Catalyt 100.0 1.1E-37 2.3E-42 326.1 18.3 191 463-673 1-195 (312)
81 PTZ00426 cAMP-dependent protei 100.0 8.8E-38 1.9E-42 329.3 17.5 246 454-747 29-284 (340)
82 cd08228 STKc_Nek6 Catalytic do 100.0 2.8E-37 6.1E-42 316.2 20.8 260 455-752 2-266 (267)
83 cd05094 PTKc_TrkC Catalytic do 100.0 2.7E-37 5.8E-42 320.2 20.7 264 455-754 5-285 (291)
84 cd05035 PTKc_Axl_like Catalyti 100.0 6.5E-37 1.4E-41 314.7 23.1 264 457-751 1-272 (273)
85 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-37 3E-42 322.3 17.9 276 456-747 1-285 (288)
86 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.2E-37 6.8E-42 330.3 21.2 265 453-752 35-398 (400)
87 PTZ00283 serine/threonine prot 100.0 1.2E-37 2.6E-42 342.9 18.3 265 450-747 27-297 (496)
88 cd05048 PTKc_Ror Catalytic Dom 100.0 3E-37 6.5E-42 318.9 20.2 260 455-750 5-282 (283)
89 PLN00034 mitogen-activated pro 100.0 1.8E-37 3.8E-42 330.3 19.0 247 455-747 74-328 (353)
90 cd05033 PTKc_EphR Catalytic do 100.0 5.8E-37 1.3E-41 313.6 22.1 256 455-751 4-265 (266)
91 PTZ00267 NIMA-related protein 100.0 1.3E-37 2.9E-42 342.8 18.6 254 456-747 68-323 (478)
92 cd05052 PTKc_Abl Catalytic dom 100.0 4.5E-37 9.7E-42 313.7 21.1 255 455-751 6-262 (263)
93 cd05108 PTKc_EGFR Catalytic do 100.0 3.4E-37 7.3E-42 323.3 20.5 259 455-755 7-272 (316)
94 cd05068 PTKc_Frk_like Catalyti 100.0 5.6E-37 1.2E-41 312.7 21.2 255 454-750 5-260 (261)
95 cd05626 STKc_LATS2 Catalytic d 100.0 2.5E-37 5.3E-42 332.4 19.4 205 456-674 2-251 (381)
96 cd05614 STKc_MSK2_N N-terminal 100.0 2.6E-37 5.7E-42 326.5 19.2 199 456-673 1-209 (332)
97 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.4E-37 1.2E-41 317.1 20.9 275 455-751 4-283 (284)
98 cd06654 STKc_PAK1 Catalytic do 100.0 4.1E-37 9E-42 319.2 20.0 249 455-747 20-270 (296)
99 cd05573 STKc_ROCK_NDR_like Cat 100.0 1E-37 2.3E-42 332.6 15.8 206 455-674 1-233 (350)
100 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.1E-36 2.3E-41 312.0 22.5 260 455-752 2-266 (267)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.3E-37 1.6E-41 315.8 21.4 273 455-752 3-282 (283)
102 cd05628 STKc_NDR1 Catalytic do 100.0 2.7E-37 5.8E-42 330.0 18.8 206 455-674 1-239 (363)
103 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.3E-37 9.3E-42 312.3 19.2 252 455-749 4-256 (256)
104 cd05584 STKc_p70S6K Catalytic 100.0 3.3E-37 7.2E-42 323.9 18.9 242 461-747 2-256 (323)
105 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-37 2.9E-42 333.3 16.1 206 455-674 1-242 (364)
106 PF07714 Pkinase_Tyr: Protein 100.0 7.5E-38 1.6E-42 318.0 13.3 250 459-748 3-259 (259)
107 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-37 4.9E-42 325.6 17.3 242 461-747 1-252 (325)
108 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-37 8.8E-42 323.5 19.0 197 457-674 1-204 (324)
109 cd05059 PTKc_Tec_like Catalyti 100.0 8.5E-37 1.8E-41 310.3 20.6 251 455-748 4-255 (256)
110 KOG0584 Serine/threonine prote 100.0 5.1E-38 1.1E-42 324.6 11.6 247 459-747 44-296 (632)
111 PRK13184 pknD serine/threonine 100.0 4.7E-37 1E-41 345.2 20.3 269 455-753 2-292 (932)
112 cd05588 STKc_aPKC Catalytic do 100.0 6.3E-37 1.4E-41 322.4 20.0 193 461-673 1-198 (329)
113 cd05062 PTKc_IGF-1R Catalytic 100.0 5.5E-37 1.2E-41 315.7 19.1 261 453-749 4-276 (277)
114 cd05596 STKc_ROCK Catalytic do 100.0 1E-37 2.3E-42 333.1 14.1 254 453-747 41-304 (370)
115 cd05598 STKc_LATS Catalytic do 100.0 1.5E-37 3.2E-42 334.1 15.2 206 455-674 1-247 (376)
116 cd07876 STKc_JNK2 Catalytic do 100.0 6.9E-37 1.5E-41 326.7 20.2 204 452-674 18-225 (359)
117 cd05621 STKc_ROCK2 Catalytic d 100.0 1.7E-37 3.8E-42 330.8 15.4 204 451-674 39-250 (370)
118 cd05590 STKc_nPKC_eta Catalyti 100.0 3.6E-37 7.8E-42 323.0 17.6 194 461-674 1-199 (320)
119 cd05618 STKc_aPKC_iota Catalyt 100.0 7.1E-37 1.5E-41 321.8 19.5 193 461-673 1-198 (329)
120 cd05587 STKc_cPKC Catalytic do 100.0 7E-37 1.5E-41 321.7 19.4 199 456-674 1-204 (324)
121 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-36 2.8E-41 309.0 20.7 249 455-750 6-255 (256)
122 cd06638 STKc_myosinIIIA Cataly 100.0 6.1E-37 1.3E-41 317.1 18.6 269 445-748 8-284 (286)
123 KOG0032 Ca2+/calmodulin-depend 100.0 7.3E-37 1.6E-41 318.4 19.0 250 453-747 33-293 (382)
124 cd06631 STKc_YSK4 Catalytic do 100.0 1.6E-36 3.5E-41 310.2 21.3 254 456-746 1-261 (265)
125 cd05111 PTK_HER3 Pseudokinase 100.0 2.1E-36 4.5E-41 311.4 22.2 257 455-753 7-270 (279)
126 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-36 2.7E-41 314.1 20.5 260 455-750 5-282 (283)
127 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.4E-36 3.1E-41 321.7 21.4 266 454-753 6-341 (343)
128 KOG4257 Focal adhesion tyrosin 100.0 4.5E-37 9.8E-42 314.0 16.7 254 457-753 391-651 (974)
129 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-36 2.2E-41 314.3 19.7 266 453-753 4-278 (280)
130 cd05605 STKc_GRK4_like Catalyt 100.0 9E-37 2E-41 315.0 19.2 252 456-747 1-261 (285)
131 cd05629 STKc_NDR_like_fungal C 100.0 3.5E-37 7.7E-42 331.1 16.7 206 455-674 1-251 (377)
132 cd05591 STKc_nPKC_epsilon Cata 100.0 5.6E-37 1.2E-41 322.0 17.8 194 461-674 1-199 (321)
133 cd05592 STKc_nPKC_theta_delta 100.0 1.2E-36 2.6E-41 318.4 20.2 194 461-674 1-199 (316)
134 cd05619 STKc_nPKC_theta Cataly 100.0 9E-37 2E-41 319.1 19.2 241 461-746 1-247 (316)
135 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2E-36 4.3E-41 308.4 21.3 254 454-750 5-259 (260)
136 cd05608 STKc_GRK1 Catalytic do 100.0 1.2E-36 2.7E-41 313.1 19.9 195 463-673 1-199 (280)
137 PTZ00036 glycogen synthase kin 100.0 6.8E-37 1.5E-41 333.2 18.9 205 453-674 64-274 (440)
138 cd05071 PTKc_Src Catalytic dom 100.0 2E-36 4.4E-41 308.5 21.2 255 454-751 5-260 (262)
139 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-36 3.7E-41 307.4 20.6 248 461-749 1-251 (252)
140 cd05045 PTKc_RET Catalytic dom 100.0 1.8E-36 3.9E-41 314.0 21.1 262 456-753 1-288 (290)
141 cd05620 STKc_nPKC_delta Cataly 100.0 9.6E-37 2.1E-41 319.1 19.2 240 461-745 1-246 (316)
142 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-36 2.4E-41 311.8 19.3 260 455-752 2-266 (267)
143 cd06646 STKc_MAP4K5 Catalytic 100.0 1E-36 2.2E-41 312.1 18.9 255 454-748 8-266 (267)
144 cd05625 STKc_LATS1 Catalytic d 100.0 4.3E-37 9.4E-42 331.0 16.8 205 456-674 2-251 (382)
145 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-36 4.5E-41 307.8 20.8 250 456-747 1-253 (256)
146 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-36 6.5E-41 313.3 22.0 262 455-755 2-279 (297)
147 cd06625 STKc_MEKK3_like Cataly 100.0 2.7E-36 5.8E-41 308.3 21.3 253 455-747 2-260 (263)
148 cd05053 PTKc_FGFR Catalytic do 100.0 1.6E-36 3.5E-41 315.1 19.9 265 452-752 9-292 (293)
149 cd05607 STKc_GRK7 Catalytic do 100.0 1.8E-36 3.9E-41 311.4 19.9 247 463-748 1-251 (277)
150 cd07853 STKc_NLK Catalytic dom 100.0 9.5E-37 2.1E-41 327.1 18.6 275 456-747 1-288 (372)
151 KOG1094 Discoidin domain recep 100.0 2.1E-37 4.5E-42 314.7 12.6 266 453-751 536-804 (807)
152 cd06656 STKc_PAK3 Catalytic do 100.0 1.4E-36 3E-41 315.5 19.1 251 454-747 18-269 (297)
153 cd05116 PTKc_Syk Catalytic dom 100.0 3.2E-36 7E-41 306.2 21.3 248 462-751 2-255 (257)
154 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.2E-36 4.8E-41 315.8 20.6 266 454-755 17-303 (307)
155 cd05039 PTKc_Csk_like Catalyti 100.0 3.3E-36 7.1E-41 306.2 21.0 250 454-750 5-255 (256)
156 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.3E-36 7.1E-41 306.9 20.9 254 454-750 5-259 (260)
157 cd05570 STKc_PKC Catalytic dom 100.0 1.6E-36 3.4E-41 318.0 18.9 242 461-747 1-252 (318)
158 cd07874 STKc_JNK3 Catalytic do 100.0 2E-36 4.2E-41 322.9 19.9 204 452-674 14-221 (355)
159 cd05575 STKc_SGK Catalytic dom 100.0 1.1E-36 2.3E-41 320.3 17.6 193 461-673 1-198 (323)
160 cd06655 STKc_PAK2 Catalytic do 100.0 2E-36 4.3E-41 313.9 19.4 249 455-747 19-269 (296)
161 KOG0667 Dual-specificity tyros 100.0 3.4E-37 7.3E-42 322.1 13.4 196 456-674 187-391 (586)
162 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.9E-36 4.2E-41 318.4 19.4 193 461-673 1-198 (327)
163 cd05622 STKc_ROCK1 Catalytic d 100.0 5.9E-37 1.3E-41 327.1 15.6 207 447-673 35-249 (371)
164 cd05055 PTKc_PDGFR Catalytic d 100.0 2.7E-36 5.9E-41 313.9 20.2 259 454-751 34-301 (302)
165 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.3E-36 9.3E-41 307.5 21.3 254 456-747 1-264 (267)
166 cd07875 STKc_JNK1 Catalytic do 100.0 1.6E-36 3.4E-41 324.6 18.8 203 453-674 22-228 (364)
167 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.4E-36 9.4E-41 310.1 21.4 274 455-751 4-283 (284)
168 cd05088 PTKc_Tie2 Catalytic do 100.0 3.5E-36 7.5E-41 313.4 20.9 262 454-754 6-283 (303)
169 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.9E-36 6.3E-41 310.2 20.0 261 453-749 4-276 (277)
170 cd05115 PTKc_Zap-70 Catalytic 100.0 5.3E-36 1.1E-40 304.4 21.6 249 462-751 2-255 (257)
171 cd05069 PTKc_Yes Catalytic dom 100.0 4.5E-36 9.8E-41 305.8 21.1 253 455-750 6-259 (260)
172 KOG0577 Serine/threonine prote 100.0 9.2E-38 2E-42 317.2 8.5 245 456-747 27-278 (948)
173 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-36 3.4E-41 318.9 18.2 199 456-674 1-204 (323)
174 cd05109 PTKc_HER2 Catalytic do 100.0 3.3E-36 7.1E-41 310.2 20.2 260 454-755 6-272 (279)
175 cd05092 PTKc_TrkA Catalytic do 100.0 3E-36 6.5E-41 310.5 19.8 259 455-749 5-279 (280)
176 cd06637 STKc_TNIK Catalytic do 100.0 2.3E-36 4.9E-41 310.4 18.8 259 452-747 3-269 (272)
177 cd06645 STKc_MAP4K3 Catalytic 100.0 1.8E-36 4E-41 310.1 18.0 254 454-747 8-265 (267)
178 cd07868 STKc_CDK8 Catalytic do 100.0 5.6E-36 1.2E-40 314.6 22.1 203 460-674 6-219 (317)
179 cd05065 PTKc_EphR_B Catalytic 100.0 3.8E-36 8.2E-41 308.1 20.0 259 455-751 4-268 (269)
180 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.6E-36 1E-40 321.1 21.1 266 452-752 34-400 (401)
181 cd05582 STKc_RSK_N N-terminal 100.0 9.3E-37 2E-41 320.1 15.5 193 461-673 2-200 (318)
182 cd05060 PTKc_Syk_like Catalyti 100.0 7.3E-36 1.6E-40 303.7 21.6 249 461-751 1-255 (257)
183 cd05066 PTKc_EphR_A Catalytic 100.0 4.7E-36 1E-40 307.0 20.3 257 455-751 4-266 (267)
184 cd06624 STKc_ASK Catalytic dom 100.0 4.5E-36 9.7E-41 307.4 20.1 258 451-747 4-265 (268)
185 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.9E-36 1.1E-40 312.9 20.8 267 452-754 12-299 (304)
186 cd05601 STKc_CRIK Catalytic do 100.0 6E-37 1.3E-41 323.5 14.0 202 455-674 1-212 (330)
187 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.4E-36 5.1E-41 316.0 18.3 271 455-747 6-286 (309)
188 cd06619 PKc_MKK5 Catalytic dom 100.0 5E-36 1.1E-40 308.7 20.5 248 456-747 2-253 (279)
189 cd05032 PTKc_InsR_like Catalyt 100.0 3.8E-36 8.3E-41 309.6 19.6 260 454-749 5-276 (277)
190 KOG4717 Serine/threonine prote 100.0 7.9E-37 1.7E-41 305.6 13.8 249 454-747 17-270 (864)
191 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.3E-36 7.2E-41 319.6 19.5 275 452-747 12-298 (343)
192 cd08219 STKc_Nek3 Catalytic do 100.0 3.9E-36 8.5E-41 305.4 19.1 250 456-747 1-252 (255)
193 cd06639 STKc_myosinIIIB Cataly 100.0 3.8E-36 8.3E-41 311.8 19.4 270 444-747 11-287 (291)
194 cd06643 STKc_SLK Catalytic dom 100.0 4.2E-36 9.2E-41 309.9 19.6 249 457-747 7-262 (282)
195 cd05034 PTKc_Src_like Catalyti 100.0 7.2E-36 1.6E-40 304.7 20.9 256 453-750 4-260 (261)
196 cd05602 STKc_SGK1 Catalytic do 100.0 2.1E-36 4.7E-41 318.2 17.5 193 461-673 1-198 (325)
197 cd06612 STKc_MST1_2 Catalytic 100.0 4.6E-36 1E-40 305.2 19.2 251 454-747 2-253 (256)
198 cd05061 PTKc_InsR Catalytic do 100.0 4.4E-36 9.6E-41 310.6 19.3 263 453-752 4-279 (288)
199 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-36 3.2E-41 319.5 15.9 193 461-673 1-198 (325)
200 cd06615 PKc_MEK Catalytic doma 100.0 4.1E-36 8.9E-41 313.7 19.1 197 455-673 1-200 (308)
201 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.6E-36 1.4E-40 306.2 20.2 258 454-751 4-267 (268)
202 cd05099 PTKc_FGFR4 Catalytic d 100.0 1E-35 2.2E-40 311.7 22.1 266 454-755 11-297 (314)
203 cd05630 STKc_GRK6 Catalytic do 100.0 5.4E-36 1.2E-40 309.0 19.6 252 456-747 1-261 (285)
204 cd05091 PTKc_Ror2 Catalytic do 100.0 4.8E-36 1.1E-40 309.8 19.3 259 456-750 6-282 (283)
205 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-35 2.3E-40 301.3 21.4 247 461-749 1-249 (250)
206 cd00192 PTKc Catalytic domain 100.0 1E-35 2.2E-40 303.8 21.2 253 461-749 1-262 (262)
207 cd05058 PTKc_Met_Ron Catalytic 100.0 8.8E-36 1.9E-40 304.2 20.8 255 461-753 1-261 (262)
208 cd06644 STKc_STK10_LOK Catalyt 100.0 6.3E-36 1.4E-40 310.2 20.0 251 455-747 12-269 (292)
209 PTZ00284 protein kinase; Provi 100.0 2.3E-36 4.9E-41 333.3 17.3 203 448-674 122-348 (467)
210 cd05615 STKc_cPKC_alpha Cataly 100.0 4.2E-36 9.1E-41 315.3 18.5 199 456-674 1-204 (323)
211 cd05097 PTKc_DDR_like Catalyti 100.0 3.2E-36 7E-41 312.8 17.5 267 454-749 4-294 (295)
212 cd05095 PTKc_DDR2 Catalytic do 100.0 4.1E-36 8.8E-41 312.2 18.2 266 455-749 5-295 (296)
213 cd06611 STKc_SLK_like Catalyti 100.0 3.7E-36 8.1E-41 310.1 17.7 252 454-747 4-262 (280)
214 cd06613 STKc_MAP4K3_like Catal 100.0 1.1E-35 2.3E-40 303.7 20.9 254 455-747 3-260 (262)
215 cd05627 STKc_NDR2 Catalytic do 100.0 1.8E-36 3.9E-41 323.5 15.8 206 455-674 1-239 (360)
216 cd06609 STKc_MST3_like Catalyt 100.0 8E-36 1.7E-40 306.6 19.9 248 455-747 1-251 (274)
217 cd05603 STKc_SGK2 Catalytic do 100.0 2.9E-36 6.4E-41 316.8 17.0 193 461-673 1-198 (321)
218 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8.8E-36 1.9E-40 307.7 20.1 266 445-747 6-279 (282)
219 cd06651 STKc_MEKK3 Catalytic d 100.0 1.2E-35 2.7E-40 303.7 20.9 204 455-673 2-211 (266)
220 PHA03211 serine/threonine kina 100.0 4.1E-36 8.9E-41 324.9 17.6 195 454-672 168-363 (461)
221 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-35 2.5E-40 307.3 20.3 274 455-751 4-283 (284)
222 PF00069 Pkinase: Protein kina 100.0 1.8E-36 3.9E-41 309.0 13.9 253 457-747 1-257 (260)
223 cd05112 PTKc_Itk Catalytic dom 100.0 1.4E-35 3E-40 301.6 20.2 251 455-748 4-255 (256)
224 cd05073 PTKc_Hck Catalytic dom 100.0 2E-35 4.3E-40 301.0 21.4 254 454-750 5-259 (260)
225 KOG0666 Cyclin C-dependent kin 100.0 6E-37 1.3E-41 288.7 9.3 209 454-674 23-243 (438)
226 cd05051 PTKc_DDR Catalytic dom 100.0 8.5E-36 1.9E-40 310.2 18.9 267 454-749 4-295 (296)
227 cd05057 PTKc_EGFR_like Catalyt 100.0 1.9E-35 4.1E-40 304.6 21.1 258 455-754 7-271 (279)
228 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-35 4.1E-40 303.1 21.0 257 454-753 5-267 (270)
229 PTZ00266 NIMA-related protein 100.0 3.6E-36 7.7E-41 339.3 17.0 261 451-747 9-295 (1021)
230 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 9.6E-36 2.1E-40 303.3 18.3 239 461-748 1-261 (262)
231 cd05100 PTKc_FGFR3 Catalytic d 100.0 2E-35 4.4E-40 312.2 21.3 265 455-755 12-297 (334)
232 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.8E-35 6.1E-40 302.5 21.6 264 457-751 1-272 (273)
233 cd05040 PTKc_Ack_like Catalyti 100.0 1.7E-35 3.6E-40 301.2 19.8 249 461-749 1-256 (257)
234 PHA03207 serine/threonine kina 100.0 5.1E-36 1.1E-40 323.0 16.9 198 454-675 91-291 (392)
235 cd05050 PTKc_Musk Catalytic do 100.0 1.1E-35 2.5E-40 307.7 18.9 260 454-749 4-287 (288)
236 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.6E-36 1.9E-40 305.6 17.7 238 462-748 2-273 (274)
237 cd08223 STKc_Nek4 Catalytic do 100.0 2.4E-35 5.2E-40 300.1 20.8 251 456-747 1-254 (257)
238 KOG4278 Protein tyrosine kinas 100.0 2.8E-36 6E-41 307.7 13.4 263 448-752 260-524 (1157)
239 cd05041 PTKc_Fes_like Catalyti 100.0 2.9E-35 6.3E-40 298.3 21.0 248 461-749 1-250 (251)
240 cd05047 PTKc_Tie Catalytic dom 100.0 3.4E-35 7.4E-40 301.0 21.7 253 461-752 1-269 (270)
241 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-35 2.3E-40 306.1 18.0 247 456-747 5-253 (277)
242 cd07867 STKc_CDC2L6 Catalytic 100.0 2.4E-35 5.3E-40 309.9 20.9 202 461-674 7-219 (317)
243 cd06647 STKc_PAK_I Catalytic d 100.0 1.6E-35 3.4E-40 306.9 19.0 250 455-747 19-269 (293)
244 cd05632 STKc_GRK5 Catalytic do 100.0 2.1E-35 4.5E-40 304.9 19.8 199 456-673 1-203 (285)
245 cd05586 STKc_Sck1_like Catalyt 100.0 4.3E-36 9.4E-41 316.8 15.0 191 463-673 1-199 (330)
246 cd06640 STKc_MST4 Catalytic do 100.0 2.3E-35 5E-40 303.5 20.0 248 455-747 4-253 (277)
247 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3E-35 6.5E-40 301.3 20.6 256 461-749 1-268 (269)
248 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.2E-35 2.5E-40 309.6 17.7 271 455-747 6-286 (301)
249 cd08227 PK_STRAD_alpha Pseudok 100.0 1E-35 2.2E-40 313.5 17.4 204 459-674 2-213 (327)
250 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.4E-36 7.4E-41 306.2 13.3 240 461-749 1-258 (258)
251 PHA03209 serine/threonine kina 100.0 8.7E-36 1.9E-40 317.1 17.0 192 453-671 64-256 (357)
252 cd07861 STKc_CDK1_euk Catalyti 100.0 2.6E-35 5.6E-40 304.8 20.0 201 456-674 1-205 (285)
253 KOG4645 MAPKKK (MAP kinase kin 100.0 2.2E-37 4.7E-42 341.9 4.7 259 450-747 1230-1494(1509)
254 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-35 4E-40 305.4 18.8 260 455-748 5-267 (284)
255 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-35 5.2E-40 300.3 19.4 248 456-747 1-255 (258)
256 cd05110 PTKc_HER4 Catalytic do 100.0 3E-35 6.6E-40 306.5 20.5 261 454-756 6-273 (303)
257 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2E-35 4.3E-40 305.7 18.8 253 455-747 1-262 (286)
258 cd05597 STKc_DMPK_like Catalyt 100.0 1.6E-35 3.5E-40 312.0 18.4 201 455-673 1-210 (331)
259 cd06652 STKc_MEKK2 Catalytic d 100.0 3.6E-35 7.7E-40 300.1 20.2 204 455-673 2-211 (265)
260 cd06608 STKc_myosinIII_like Ca 100.0 1.9E-35 4.2E-40 304.1 18.3 262 452-747 3-272 (275)
261 cd08217 STKc_Nek2 Catalytic do 100.0 3.5E-35 7.5E-40 300.4 20.1 254 456-747 1-262 (265)
262 cd08221 STKc_Nek9 Catalytic do 100.0 5.2E-35 1.1E-39 297.4 21.2 251 456-748 1-254 (256)
263 cd07839 STKc_CDK5 Catalytic do 100.0 9.4E-36 2E-40 307.9 15.9 270 456-747 1-281 (284)
264 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-35 2.5E-40 307.6 16.4 248 457-747 24-272 (292)
265 cd08220 STKc_Nek8 Catalytic do 100.0 5E-35 1.1E-39 297.6 20.6 249 456-747 1-253 (256)
266 KOG0199 ACK and related non-re 100.0 3.3E-36 7.1E-41 311.7 11.8 253 456-748 111-369 (1039)
267 KOG0596 Dual specificity; seri 100.0 2.8E-36 6E-41 305.5 10.9 256 452-747 358-627 (677)
268 KOG0604 MAP kinase-activated p 100.0 3.3E-36 7.1E-41 282.5 10.6 257 453-747 59-322 (400)
269 KOG0579 Ste20-like serine/thre 100.0 6.3E-37 1.4E-41 313.0 6.3 250 456-747 33-289 (1187)
270 cd05044 PTKc_c-ros Catalytic d 100.0 3.1E-35 6.6E-40 301.5 18.7 253 461-749 1-268 (269)
271 KOG1025 Epidermal growth facto 100.0 1.7E-35 3.7E-40 311.6 16.9 259 456-756 697-962 (1177)
272 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.3E-35 5.1E-40 305.4 17.8 200 455-674 1-204 (286)
273 cd05083 PTKc_Chk Catalytic dom 100.0 4.3E-35 9.3E-40 297.5 19.3 247 455-750 6-253 (254)
274 cd06630 STKc_MEKK1 Catalytic d 100.0 4.2E-35 9.1E-40 300.4 19.4 254 456-747 1-264 (268)
275 cd06659 STKc_PAK6 Catalytic do 100.0 2.1E-35 4.6E-40 306.4 17.4 248 457-747 23-271 (297)
276 KOG1035 eIF-2alpha kinase GCN2 100.0 3.7E-36 7.9E-41 330.8 12.1 264 452-746 476-870 (1351)
277 cd05609 STKc_MAST Catalytic do 100.0 4E-35 8.6E-40 306.1 19.4 205 455-673 1-218 (305)
278 cd06605 PKc_MAPKK Catalytic do 100.0 3E-35 6.5E-40 300.9 17.8 254 455-747 1-257 (265)
279 cd08218 STKc_Nek1 Catalytic do 100.0 6.2E-35 1.3E-39 296.8 20.0 250 456-747 1-253 (256)
280 cd05574 STKc_phototropin_like 100.0 4.9E-35 1.1E-39 307.3 19.9 258 455-747 1-289 (316)
281 cd05046 PTK_CCK4 Pseudokinase 100.0 4.8E-35 1E-39 301.0 19.2 258 455-749 5-274 (275)
282 cd07849 STKc_ERK1_2_like Catal 100.0 2.2E-35 4.7E-40 312.3 16.9 282 454-751 4-298 (336)
283 cd05624 STKc_MRCK_beta Catalyt 100.0 2E-35 4.3E-40 311.3 16.6 201 455-673 1-210 (331)
284 cd05042 PTKc_Aatyk Catalytic d 100.0 3.6E-35 7.8E-40 300.8 17.6 255 461-748 1-267 (269)
285 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.2E-35 1.3E-39 301.9 19.5 261 455-747 1-266 (287)
286 cd05623 STKc_MRCK_alpha Cataly 100.0 2.2E-35 4.9E-40 311.3 16.5 201 455-673 1-210 (332)
287 smart00219 TyrKc Tyrosine kina 100.0 1.4E-34 3.1E-39 294.7 20.8 251 457-748 1-258 (258)
288 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.5E-35 1.8E-39 300.6 19.5 254 455-747 1-261 (283)
289 cd06626 STKc_MEKK4 Catalytic d 100.0 1.5E-34 3.2E-39 295.6 21.0 254 456-746 1-260 (264)
290 cd07860 STKc_CDK2_3 Catalytic 100.0 7.8E-35 1.7E-39 301.0 18.9 272 456-747 1-281 (284)
291 cd06623 PKc_MAPKK_plant_like C 100.0 1.4E-34 3.1E-39 295.7 20.6 252 455-747 1-256 (264)
292 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.2E-35 1.8E-39 296.6 18.6 237 461-748 1-258 (259)
293 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.8E-34 3.9E-39 295.5 21.2 261 455-747 1-264 (267)
294 cd06648 STKc_PAK_II Catalytic 100.0 1.3E-34 2.8E-39 298.9 20.1 249 456-747 20-269 (285)
295 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-34 2.5E-39 300.4 19.7 197 455-674 1-201 (290)
296 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-34 3.7E-39 297.1 20.7 247 456-747 5-253 (277)
297 cd07832 STKc_CCRK Catalytic do 100.0 7E-35 1.5E-39 301.8 17.7 199 456-673 1-203 (286)
298 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.5E-35 2E-39 301.4 18.6 202 453-674 3-207 (291)
299 cd05633 STKc_GRK3 Catalytic do 100.0 1.6E-34 3.4E-39 297.1 19.8 242 462-747 1-255 (279)
300 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-34 3.1E-39 296.5 19.4 253 456-749 1-268 (269)
301 cd07844 STKc_PCTAIRE_like Cata 100.0 8.2E-35 1.8E-39 301.9 17.8 200 455-674 5-207 (291)
302 cd06614 STKc_PAK Catalytic dom 100.0 1.9E-34 4.2E-39 298.2 20.5 254 452-747 16-270 (286)
303 cd06629 STKc_MAPKKK_Bck1_like 100.0 9.4E-35 2E-39 298.3 18.0 255 456-747 2-269 (272)
304 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.2E-34 2.6E-39 296.5 18.7 255 461-749 1-267 (268)
305 KOG4250 TANK binding protein k 100.0 2.2E-35 4.7E-40 309.0 12.4 210 455-677 13-230 (732)
306 cd07841 STKc_CDK7 Catalytic do 100.0 9.6E-35 2.1E-39 302.5 17.3 270 456-747 1-282 (298)
307 cd05578 STKc_Yank1 Catalytic d 100.0 7.9E-35 1.7E-39 296.4 16.2 199 456-675 1-203 (258)
308 cd07850 STKc_JNK Catalytic dom 100.0 2E-34 4.3E-39 307.0 20.0 204 452-674 13-220 (353)
309 KOG0690 Serine/threonine prote 100.0 2.2E-35 4.9E-40 279.4 10.9 201 454-674 167-371 (516)
310 cd06917 STKc_NAK1_like Catalyt 100.0 2.4E-34 5.2E-39 296.2 19.4 248 456-747 2-255 (277)
311 KOG0472 Leucine-rich repeat pr 100.0 9.9E-39 2.2E-43 310.7 -12.5 368 2-383 68-541 (565)
312 cd07855 STKc_ERK5 Catalytic do 100.0 1.9E-34 4.1E-39 304.9 18.9 280 454-748 4-295 (334)
313 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.8E-35 2.1E-39 307.3 16.7 284 454-753 4-299 (337)
314 cd07865 STKc_CDK9 Catalytic do 100.0 3.1E-34 6.7E-39 300.7 19.9 283 454-747 11-307 (310)
315 KOG0586 Serine/threonine prote 100.0 5.7E-35 1.2E-39 301.9 13.9 250 452-747 53-306 (596)
316 KOG0669 Cyclin T-dependent kin 100.0 1.8E-36 4E-41 277.1 2.3 282 455-748 17-316 (376)
317 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.1E-35 2E-39 300.9 15.3 199 455-673 1-203 (286)
318 KOG0444 Cytoskeletal regulator 100.0 2E-37 4.3E-42 316.6 -4.9 366 3-384 8-376 (1255)
319 cd07837 STKc_CdkB_plant Cataly 100.0 3.6E-34 7.8E-39 297.8 19.5 208 455-673 1-214 (295)
320 KOG0607 MAP kinase-interacting 100.0 9.1E-35 2E-39 274.9 13.4 274 447-746 75-360 (463)
321 PHA03390 pk1 serine/threonine- 100.0 7.3E-34 1.6E-38 290.1 21.1 249 447-746 6-261 (267)
322 cd06653 STKc_MEKK3_like_1 Cata 100.0 7E-34 1.5E-38 290.3 20.8 254 455-747 2-261 (264)
323 cd06607 STKc_TAO Catalytic dom 100.0 4.1E-34 8.9E-39 298.7 19.2 247 454-747 14-267 (307)
324 cd06606 STKc_MAPKKK Catalytic 100.0 6.1E-34 1.3E-38 290.2 19.8 254 456-747 1-257 (260)
325 cd06635 STKc_TAO1 Catalytic do 100.0 8E-34 1.7E-38 297.7 21.2 247 456-749 26-279 (317)
326 cd05122 PKc_STE Catalytic doma 100.0 6.9E-34 1.5E-38 288.6 19.8 250 456-747 1-251 (253)
327 KOG0983 Mitogen-activated prot 100.0 4.2E-35 9.1E-40 271.5 9.5 249 456-747 93-349 (391)
328 cd07843 STKc_CDC2L1 Catalytic 100.0 2.2E-34 4.8E-39 298.9 16.1 202 455-674 5-210 (293)
329 cd08225 STKc_Nek5 Catalytic do 100.0 5E-34 1.1E-38 290.4 18.3 250 456-747 1-254 (257)
330 cd07836 STKc_Pho85 Catalytic d 100.0 7.4E-34 1.6E-38 293.8 19.6 273 456-747 1-281 (284)
331 cd08226 PK_STRAD_beta Pseudoki 100.0 7.7E-34 1.7E-38 299.4 19.9 202 461-674 4-213 (328)
332 PHA02882 putative serine/threo 100.0 6.1E-34 1.3E-38 295.0 18.8 267 454-748 11-293 (294)
333 KOG0986 G protein-coupled rece 100.0 5.1E-35 1.1E-39 289.3 10.0 202 453-673 183-388 (591)
334 cd07842 STKc_CDK8_like Catalyt 100.0 1E-33 2.2E-38 297.7 20.6 209 456-675 1-220 (316)
335 cd07833 STKc_CDKL Catalytic do 100.0 4.4E-34 9.5E-39 296.2 17.6 201 455-674 1-205 (288)
336 cd07852 STKc_MAPK15 Catalytic 100.0 4.6E-34 1E-38 302.4 18.0 279 453-747 5-295 (337)
337 cd07845 STKc_CDK10 Catalytic d 100.0 4.6E-34 1E-38 298.8 17.7 203 454-674 6-212 (309)
338 cd07835 STKc_CDK1_like Catalyt 100.0 4.5E-34 9.8E-39 295.1 17.4 271 457-747 1-280 (283)
339 cd05572 STKc_cGK_PKG Catalytic 100.0 9.5E-34 2.1E-38 289.1 19.4 192 463-675 1-196 (262)
340 cd05606 STKc_beta_ARK Catalyti 100.0 1.6E-33 3.4E-38 289.7 21.1 242 462-747 1-255 (278)
341 cd06627 STKc_Cdc7_like Catalyt 100.0 1.1E-33 2.4E-38 287.3 19.6 247 456-746 1-250 (254)
342 cd08215 STKc_Nek Catalytic dom 100.0 1.5E-33 3.2E-38 287.1 20.2 252 456-747 1-255 (258)
343 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.5E-34 9.7E-39 302.7 16.9 278 454-747 4-300 (342)
344 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-33 3.5E-38 289.8 20.3 193 463-674 1-197 (277)
345 cd06657 STKc_PAK4 Catalytic do 100.0 7.1E-34 1.5E-38 294.0 17.7 245 460-747 25-270 (292)
346 cd07838 STKc_CDK4_6_like Catal 100.0 1.6E-33 3.4E-38 291.9 20.3 274 457-747 1-284 (287)
347 cd07834 STKc_MAPK Catalytic do 100.0 5.2E-34 1.1E-38 301.5 17.0 283 456-753 1-297 (330)
348 PHA03210 serine/threonine kina 100.0 4.6E-34 9.9E-39 315.7 17.0 204 453-671 146-368 (501)
349 cd06616 PKc_MKK4 Catalytic dom 100.0 5.3E-34 1.1E-38 295.4 16.4 257 456-747 5-267 (288)
350 cd07866 STKc_BUR1 Catalytic do 100.0 8.1E-34 1.8E-38 297.7 17.5 212 454-674 7-230 (311)
351 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-33 2.9E-38 287.1 18.0 250 456-747 1-253 (256)
352 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-33 2.5E-38 296.7 17.9 275 460-748 7-296 (314)
353 KOG0444 Cytoskeletal regulator 100.0 1.8E-36 3.9E-41 309.6 -3.4 347 1-366 31-381 (1255)
354 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-33 3.5E-38 291.8 18.5 201 457-674 1-205 (287)
355 cd07831 STKc_MOK Catalytic dom 100.0 2.2E-33 4.9E-38 289.9 19.1 268 457-747 1-279 (282)
356 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-33 3.6E-38 293.8 18.2 208 452-673 4-220 (302)
357 cd06634 STKc_TAO2 Catalytic do 100.0 1.8E-33 4E-38 293.7 18.4 248 455-749 15-269 (308)
358 cd05118 STKc_CMGC Catalytic do 100.0 2.5E-33 5.4E-38 289.7 18.5 269 457-747 1-280 (283)
359 cd05611 STKc_Rim15_like Cataly 100.0 2.3E-33 5.1E-38 285.9 17.8 189 461-673 2-195 (260)
360 cd06618 PKc_MKK7 Catalytic dom 100.0 3E-33 6.5E-38 290.7 18.4 253 454-748 14-274 (296)
361 KOG0662 Cyclin-dependent kinas 100.0 1.1E-33 2.4E-38 245.7 12.5 198 456-673 3-205 (292)
362 PLN00009 cyclin-dependent kina 100.0 2.8E-33 6E-38 290.8 18.0 201 455-674 2-207 (294)
363 cd07879 STKc_p38delta_MAPK13 C 100.0 2.8E-33 6.1E-38 296.6 18.2 277 454-753 14-305 (342)
364 cd06633 STKc_TAO3 Catalytic do 100.0 7.1E-33 1.5E-37 289.8 20.7 244 457-747 23-273 (313)
365 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.3E-33 7.1E-38 293.9 18.1 201 450-674 5-209 (328)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.3E-33 7.2E-38 296.0 18.0 203 452-674 12-219 (343)
367 KOG0671 LAMMER dual specificit 100.0 3.2E-34 6.8E-39 279.1 8.8 270 454-747 88-406 (415)
368 cd07877 STKc_p38alpha_MAPK14 C 100.0 6E-33 1.3E-37 294.2 19.4 280 448-748 10-301 (345)
369 cd05581 STKc_PDK1 Catalytic do 100.0 3.5E-33 7.5E-38 288.2 16.9 254 455-747 1-277 (280)
370 cd07857 STKc_MPK1 Catalytic do 100.0 4.2E-33 9.1E-38 294.3 17.9 206 456-674 1-213 (332)
371 PTZ00024 cyclin-dependent prot 100.0 5E-33 1.1E-37 294.4 18.4 206 454-674 7-237 (335)
372 cd05579 STKc_MAST_like Catalyt 100.0 3.5E-33 7.6E-38 285.6 16.6 198 463-674 1-204 (265)
373 cd05613 STKc_MSK1_N N-terminal 100.0 9.1E-33 2E-37 286.3 19.6 199 456-673 1-210 (290)
374 KOG0587 Traf2- and Nck-interac 100.0 2.8E-33 6.1E-38 298.7 15.2 269 442-747 6-282 (953)
375 cd07851 STKc_p38 Catalytic dom 100.0 2.7E-33 5.8E-38 296.9 14.6 273 453-747 13-298 (343)
376 cd05583 STKc_MSK_N N-terminal 100.0 7.4E-33 1.6E-37 286.7 17.0 255 456-750 1-266 (288)
377 KOG1024 Receptor-like protein 100.0 3.3E-33 7.2E-38 271.2 13.0 274 447-755 276-559 (563)
378 KOG4236 Serine/threonine prote 100.0 7E-34 1.5E-38 285.3 8.4 195 460-674 569-769 (888)
379 KOG0612 Rho-associated, coiled 100.0 6.5E-34 1.4E-38 310.6 8.8 209 447-674 67-284 (1317)
380 KOG0200 Fibroblast/platelet-de 100.0 1.2E-32 2.5E-37 308.6 19.2 263 454-752 295-580 (609)
381 cd07830 STKc_MAK_like Catalyti 100.0 1.7E-32 3.7E-37 283.4 18.9 198 457-674 1-202 (283)
382 cd08222 STKc_Nek11 Catalytic d 100.0 1.3E-32 2.9E-37 280.3 16.9 251 456-747 1-257 (260)
383 KOG1151 Tousled-like protein k 100.0 9.3E-34 2E-38 278.8 7.4 212 453-675 461-688 (775)
384 cd07829 STKc_CDK_like Catalyti 100.0 3.8E-32 8.2E-37 280.7 18.9 198 457-674 1-202 (282)
385 cd05123 STKc_AGC Catalytic dom 100.0 3.7E-32 8E-37 275.4 18.0 192 463-674 1-196 (250)
386 KOG0603 Ribosomal protein S6 k 100.0 1.1E-32 2.3E-37 286.7 14.0 242 453-748 320-564 (612)
387 KOG1006 Mitogen-activated prot 100.0 1E-34 2.3E-39 268.0 -1.3 254 460-747 69-327 (361)
388 cd05610 STKc_MASTL Catalytic d 100.0 3.4E-32 7.4E-37 309.9 18.6 145 455-613 4-152 (669)
389 PLN03225 Serine/threonine-prot 100.0 3.1E-32 6.6E-37 302.1 15.5 274 453-747 130-450 (566)
390 KOG0696 Serine/threonine prote 100.0 9E-33 2E-37 269.6 9.8 203 454-676 348-555 (683)
391 cd05576 STKc_RPK118_like Catal 100.0 8.9E-32 1.9E-36 269.6 16.2 180 466-673 4-184 (237)
392 KOG0614 cGMP-dependent protein 100.0 2.8E-33 6.2E-38 280.1 4.5 200 454-674 419-622 (732)
393 KOG0984 Mitogen-activated prot 100.0 1.4E-32 3E-37 244.7 7.7 222 452-690 43-271 (282)
394 KOG1027 Serine/threonine prote 100.0 1.2E-32 2.7E-37 292.4 6.0 246 460-747 514-767 (903)
395 KOG0472 Leucine-rich repeat pr 100.0 8E-35 1.7E-39 283.6 -10.0 354 4-381 116-562 (565)
396 KOG0695 Serine/threonine prote 100.0 4.4E-31 9.6E-36 251.2 12.4 200 454-673 249-453 (593)
397 PLN03224 probable serine/threo 100.0 2.2E-30 4.8E-35 279.2 17.6 212 453-672 143-434 (507)
398 KOG1290 Serine/threonine prote 100.0 2.3E-30 5E-35 258.9 16.1 136 454-598 77-221 (590)
399 smart00220 S_TKc Serine/Threon 100.0 4E-30 8.7E-35 259.2 17.4 238 467-746 1-240 (244)
400 KOG0608 Warts/lats-like serine 100.0 9.1E-31 2E-35 268.4 12.2 212 455-680 629-880 (1034)
401 KOG0668 Casein kinase II, alph 100.0 2.9E-31 6.2E-36 239.8 7.6 265 454-747 37-322 (338)
402 KOG1152 Signal transduction se 100.0 1.7E-30 3.6E-35 264.4 9.1 199 453-673 559-771 (772)
403 KOG0664 Nemo-like MAPK-related 100.0 1.9E-31 4.1E-36 247.0 -0.1 203 457-674 55-261 (449)
404 KOG0665 Jun-N-terminal kinase 100.0 1.3E-29 2.9E-34 241.1 10.3 270 454-747 16-310 (369)
405 KOG0670 U4/U6-associated splic 100.0 1.1E-29 2.4E-34 255.2 7.5 210 444-674 421-638 (752)
406 KOG1167 Serine/threonine prote 100.0 2.3E-29 4.9E-34 249.0 9.0 279 450-747 31-381 (418)
407 KOG0576 Mitogen-activated prot 100.0 6.3E-30 1.4E-34 264.7 5.2 252 454-746 14-270 (829)
408 KOG1345 Serine/threonine kinas 100.0 3.2E-29 6.9E-34 232.4 9.2 208 454-685 23-239 (378)
409 KOG0618 Serine/threonine phosp 100.0 1.1E-30 2.5E-35 280.1 -3.2 366 4-383 47-489 (1081)
410 cd00180 PKc Catalytic domain o 99.9 6.3E-27 1.4E-31 230.4 18.5 210 463-747 1-214 (215)
411 smart00221 STYKc Protein kinas 99.9 2.2E-26 4.7E-31 229.0 17.1 199 457-673 1-202 (225)
412 KOG0618 Serine/threonine phosp 99.9 7.6E-29 1.6E-33 266.2 -5.8 354 4-380 23-440 (1081)
413 PLN03210 Resistant to P. syrin 99.9 3.1E-24 6.7E-29 258.7 25.8 322 19-363 550-886 (1153)
414 PLN03210 Resistant to P. syrin 99.9 6.3E-24 1.4E-28 256.1 26.0 335 1-358 557-904 (1153)
415 smart00750 KIND kinase non-cat 99.9 9.2E-25 2E-29 208.0 13.3 172 541-754 1-172 (176)
416 PLN00181 protein SPA1-RELATED; 99.9 2.8E-25 6.1E-30 260.2 9.9 206 507-747 28-265 (793)
417 PRK09188 serine/threonine prot 99.9 1.2E-23 2.7E-28 217.3 13.8 174 449-646 12-195 (365)
418 PRK15387 E3 ubiquitin-protein 99.9 3.1E-23 6.7E-28 231.3 17.2 61 276-341 403-463 (788)
419 PRK15387 E3 ubiquitin-protein 99.9 2.3E-23 4.9E-28 232.4 15.3 265 4-321 203-467 (788)
420 KOG4237 Extracellular matrix p 99.9 2E-25 4.3E-30 218.1 -3.4 270 6-287 50-358 (498)
421 KOG1164 Casein kinase (serine/ 99.9 3.5E-22 7.6E-27 208.4 20.5 207 456-674 19-240 (322)
422 KOG4237 Extracellular matrix p 99.9 1.8E-24 3.9E-29 211.4 -0.6 283 76-365 68-364 (498)
423 KOG1163 Casein kinase (serine/ 99.9 7.2E-23 1.6E-27 187.2 8.7 208 453-676 13-226 (341)
424 KOG1165 Casein kinase (serine/ 99.9 1.9E-21 4E-26 186.3 17.3 207 455-677 28-242 (449)
425 KOG0195 Integrin-linked kinase 99.9 3.1E-23 6.7E-28 192.6 4.7 248 457-751 192-446 (448)
426 KOG0590 Checkpoint kinase and 99.9 9.7E-23 2.1E-27 225.1 5.4 256 458-746 321-584 (601)
427 KOG1240 Protein kinase contain 99.9 1.1E-22 2.4E-27 222.5 4.7 252 456-749 24-293 (1431)
428 PRK15370 E3 ubiquitin-protein 99.9 1.1E-21 2.5E-26 220.6 12.0 246 3-312 179-428 (754)
429 PRK10359 lipopolysaccharide co 99.9 7.3E-22 1.6E-26 188.9 8.7 177 452-665 28-216 (232)
430 COG0515 SPS1 Serine/threonine 99.8 2.7E-20 5.8E-25 198.2 18.5 264 457-747 2-275 (384)
431 PRK15370 E3 ubiquitin-protein 99.8 3.1E-21 6.8E-26 217.0 11.2 222 106-361 221-446 (754)
432 cd05147 RIO1_euk RIO kinase fa 99.8 5.8E-21 1.3E-25 181.8 11.3 139 460-615 2-167 (190)
433 KOG4158 BRPK/PTEN-induced prot 99.8 1.1E-20 2.4E-25 185.0 12.6 207 509-749 274-512 (598)
434 PRK12274 serine/threonine prot 99.8 3.4E-20 7.4E-25 173.0 11.5 192 457-674 4-210 (218)
435 cd05145 RIO1_like RIO kinase f 99.8 7E-20 1.5E-24 175.5 13.6 138 460-615 2-167 (190)
436 PF14531 Kinase-like: Kinase-l 99.8 2.6E-20 5.6E-25 183.8 6.1 207 456-675 13-254 (288)
437 KOG0617 Ras suppressor protein 99.8 4.2E-21 9.2E-26 166.4 -2.0 180 200-385 31-214 (264)
438 PRK10345 hypothetical protein; 99.8 1.1E-18 2.5E-23 167.2 13.5 140 457-612 4-156 (210)
439 KOG0617 Ras suppressor protein 99.8 4.4E-21 9.4E-26 166.3 -2.9 161 26-199 32-193 (264)
440 cd00116 LRR_RI Leucine-rich re 99.8 3.4E-21 7.4E-26 202.6 -5.4 286 31-359 2-319 (319)
441 KOG1023 Natriuretic peptide re 99.8 8.1E-19 1.8E-23 184.3 11.2 216 505-753 1-226 (484)
442 KOG0603 Ribosomal protein S6 k 99.8 1.2E-19 2.7E-24 189.7 4.2 186 462-673 1-193 (612)
443 cd00116 LRR_RI Leucine-rich re 99.8 2.5E-20 5.5E-25 196.0 -1.3 203 6-215 2-234 (319)
444 KOG1033 eIF-2alpha kinase PEK/ 99.8 9E-20 1.9E-24 187.1 2.4 202 456-666 245-457 (516)
445 KOG1166 Mitotic checkpoint ser 99.8 2.1E-18 4.5E-23 193.8 11.4 202 448-670 691-902 (974)
446 smart00090 RIO RIO-like kinase 99.7 6.4E-18 1.4E-22 166.6 12.2 141 456-615 29-198 (237)
447 cd05144 RIO2_C RIO kinase fami 99.7 7.2E-17 1.6E-21 156.2 12.9 144 448-615 8-175 (198)
448 PRK09605 bifunctional UGMP fam 99.7 1.8E-16 4E-21 176.9 14.8 146 445-614 323-476 (535)
449 PRK14879 serine/threonine prot 99.7 1.8E-16 3.8E-21 155.6 12.6 133 461-613 2-142 (211)
450 KOG0606 Microtubule-associated 99.7 6.8E-17 1.5E-21 177.7 7.3 172 454-676 82-263 (1205)
451 TIGR03724 arch_bud32 Kae1-asso 99.7 4.9E-16 1.1E-20 150.9 11.2 130 462-614 1-138 (199)
452 cd05119 RIO RIO kinase family, 99.6 3.7E-15 7.9E-20 143.2 11.2 135 460-615 2-164 (187)
453 KOG0590 Checkpoint kinase and 99.6 1.7E-16 3.7E-21 175.8 1.4 255 454-746 19-285 (601)
454 cd05120 APH_ChoK_like Aminogly 99.6 7.9E-15 1.7E-19 135.9 10.9 135 459-614 2-138 (155)
455 PRK01723 3-deoxy-D-manno-octul 99.6 2E-14 4.4E-19 142.1 12.8 139 460-614 36-191 (239)
456 KOG1266 Protein kinase [Signal 99.5 1.7E-14 3.8E-19 138.8 7.2 213 504-748 120-332 (458)
457 PLN03150 hypothetical protein; 99.5 1.3E-13 2.9E-18 155.4 10.6 115 276-390 419-538 (623)
458 COG4886 Leucine-rich repeat (L 99.4 1.1E-13 2.4E-18 149.6 7.5 201 31-247 97-298 (394)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 2.8E-13 6E-18 145.9 10.4 143 460-617 122-309 (437)
460 KOG0532 Leucine-rich repeat (L 99.4 1.3E-14 2.8E-19 149.4 -0.2 193 105-333 75-270 (722)
461 KOG0532 Leucine-rich repeat (L 99.4 7E-15 1.5E-19 151.3 -2.3 193 134-361 54-248 (722)
462 COG4886 Leucine-rich repeat (L 99.4 2E-13 4.4E-18 147.6 8.4 201 6-223 97-298 (394)
463 KOG0601 Cyclin-dependent kinas 99.4 7.3E-13 1.6E-17 139.6 7.1 200 456-671 115-327 (524)
464 PRK04750 ubiB putative ubiquin 99.3 3.4E-12 7.5E-17 138.6 9.2 150 454-618 119-317 (537)
465 PLN03150 hypothetical protein; 99.3 6.2E-12 1.3E-16 142.0 11.6 111 254-364 421-532 (623)
466 KOG1909 Ran GTPase-activating 99.3 4.8E-14 1E-18 137.3 -6.3 236 1-239 29-311 (382)
467 KOG1243 Protein kinase [Genera 99.3 1.5E-11 3.4E-16 130.7 11.7 167 476-668 34-200 (690)
468 KOG1259 Nischarin, modulator o 99.3 1.6E-12 3.4E-17 123.7 2.5 133 101-240 280-413 (490)
469 cd05146 RIO3_euk RIO kinase fa 99.3 7.2E-11 1.6E-15 111.0 13.3 136 460-615 2-174 (197)
470 KOG1909 Ran GTPase-activating 99.3 1.1E-13 2.4E-18 134.7 -5.6 257 46-336 25-311 (382)
471 cd05151 ChoK Choline Kinase (C 99.2 3.6E-11 7.8E-16 113.5 10.6 130 460-613 3-135 (170)
472 KOG1259 Nischarin, modulator o 99.2 1.6E-12 3.4E-17 123.7 0.7 131 152-313 282-413 (490)
473 KOG4658 Apoptotic ATPase [Sign 99.2 6.1E-12 1.3E-16 144.7 5.3 290 28-332 524-828 (889)
474 KOG3207 Beta-tubulin folding c 99.2 1.1E-12 2.4E-17 131.4 -1.3 143 152-313 195-340 (505)
475 KOG3207 Beta-tubulin folding c 99.2 2.4E-12 5.2E-17 129.0 0.6 209 25-240 119-340 (505)
476 PF14580 LRR_9: Leucine-rich r 99.2 1.5E-11 3.2E-16 113.2 4.4 123 28-162 20-148 (175)
477 PF14580 LRR_9: Leucine-rich r 99.2 1.5E-11 3.3E-16 113.1 4.4 119 35-167 5-126 (175)
478 KOG0531 Protein phosphatase 1, 99.2 6.7E-12 1.5E-16 135.7 0.8 235 132-381 74-316 (414)
479 KOG0531 Protein phosphatase 1, 99.1 7.4E-12 1.6E-16 135.4 0.4 86 276-364 233-322 (414)
480 cd05154 ACAD10_11_like Acyl-Co 99.1 7.3E-10 1.6E-14 109.7 13.3 145 461-614 4-206 (223)
481 COG3642 Mn2+-dependent serine/ 99.1 1.1E-09 2.4E-14 98.7 11.9 128 461-613 2-139 (204)
482 KOG0606 Microtubule-associated 99.0 6.8E-11 1.5E-15 131.2 2.9 211 452-676 801-1040(1205)
483 KOG3087 Serine/threonine prote 99.0 2.2E-09 4.7E-14 96.0 11.1 142 459-613 11-164 (229)
484 PF01163 RIO1: RIO1 family; I 99.0 1.8E-09 4E-14 101.2 11.2 124 470-614 1-155 (188)
485 KOG0601 Cyclin-dependent kinas 99.0 2.4E-10 5.2E-15 120.8 5.1 197 451-670 261-465 (524)
486 KOG4658 Apoptotic ATPase [Sign 99.0 4E-10 8.7E-15 129.9 5.6 157 43-210 516-676 (889)
487 COG4248 Uncharacterized protei 99.0 3E-08 6.4E-13 99.8 17.2 202 458-674 14-225 (637)
488 KOG3741 Poly(A) ribonuclease s 98.9 1E-08 2.2E-13 105.9 12.6 176 467-669 288-474 (655)
489 PF13855 LRR_8: Leucine rich r 98.9 8E-10 1.7E-14 83.5 3.5 61 2-63 1-61 (61)
490 COG0478 RIO-like serine/threon 98.9 5.9E-09 1.3E-13 99.8 9.9 147 444-613 80-250 (304)
491 PRK15123 lipopolysaccharide co 98.9 2.1E-08 4.5E-13 100.3 14.1 145 461-613 28-193 (268)
492 PF13855 LRR_8: Leucine rich r 98.9 1.6E-09 3.4E-14 81.9 3.4 61 275-335 1-61 (61)
493 KOG1859 Leucine-rich repeat pr 98.8 1.3E-10 2.8E-15 123.4 -4.9 89 270-361 204-293 (1096)
494 KOG2982 Uncharacterized conser 98.8 1.9E-09 4.2E-14 102.9 2.9 189 125-337 66-263 (418)
495 PRK09902 hypothetical protein; 98.8 1.4E-07 3E-12 88.8 13.6 143 463-614 26-179 (216)
496 COG5238 RNA1 Ran GTPase-activa 98.8 7.8E-10 1.7E-14 104.2 -1.8 235 1-239 29-316 (388)
497 PF06176 WaaY: Lipopolysacchar 98.7 1.9E-07 4.2E-12 88.0 11.8 142 453-613 29-182 (229)
498 PF06293 Kdo: Lipopolysacchari 98.7 2E-07 4.4E-12 90.3 11.9 110 495-614 55-170 (206)
499 KOG1859 Leucine-rich repeat pr 98.7 2.8E-10 6E-15 121.0 -8.7 101 132-239 166-267 (1096)
500 KOG2137 Protein kinase [Signal 98.6 1.2E-08 2.6E-13 109.5 2.6 100 569-670 106-208 (700)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.6e-86 Score=794.71 Aligned_cols=709 Identities=29% Similarity=0.496 Sum_probs=490.0
Q ss_pred CCCccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEE
Q 004218 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMY 80 (767)
Q Consensus 1 l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 80 (767)
|++|++|+|++|++++.+|..+. .+++|++|++++|.+.+.+|..++++++|++|+|++|.+.+.+|..+.++++|++|
T Consensus 211 l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 289 (968)
T PLN00113 211 MKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISL 289 (968)
T ss_pred cCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEE
Confidence 35566666666666666665554 36666666666666666666666666666666666666666666666666666666
Q ss_pred eecCccccCCCCCCc------------------cccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcc
Q 004218 81 NIGFNKIVGSGDEGL------------------SFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRF 142 (767)
Q Consensus 81 ~l~~n~l~~~~~~~~------------------~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i 142 (767)
++++|.+.+..+..+ ..+..+.++++|+.|++++|++.+.+|..++.+.+ |+.|++++|++
T Consensus 290 ~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~-L~~L~Ls~n~l 368 (968)
T PLN00113 290 DLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNN-LTVLDLSTNNL 368 (968)
T ss_pred ECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCC-CcEEECCCCee
Confidence 666665543110000 12233444444555555555554445554544444 55555555555
Q ss_pred cccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccc
Q 004218 143 YGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSF 222 (767)
Q Consensus 143 ~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 222 (767)
.+.+|..+..+++|+.|++++|.+.+..|..+..+++|++|++++|++++..|..|..+++|+.|++++|.+++..+..+
T Consensus 369 ~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 448 (968)
T PLN00113 369 TGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRK 448 (968)
T ss_pred EeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhh
Confidence 54555555555555555555555555555556666666666666666666666666666777777777777766666666
Q ss_pred cCccccccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccc
Q 004218 223 GNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLE 302 (767)
Q Consensus 223 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~ 302 (767)
..+++|+.|++++|++.+.+|..+ ..++| +.+++++|++++..|..+..+++|+.|+|++|.+.+.+|..+..+++|+
T Consensus 449 ~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L-~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 526 (968)
T PLN00113 449 WDMPSLQMLSLARNKFFGGLPDSF-GSKRL-ENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLV 526 (968)
T ss_pred ccCCCCcEEECcCceeeeecCccc-ccccc-eEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCC
Confidence 667777777777777766666544 34555 4458999999999999999999999999999999999999999999999
Q ss_pred eeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCCccccccccccccCCcC
Q 004218 303 KLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGNPK 382 (767)
Q Consensus 303 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~Np~ 382 (767)
.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++++.+|..+.+..+....+.|||.
T Consensus 527 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~ 606 (968)
T PLN00113 527 SLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNID 606 (968)
T ss_pred EEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888888999999
Q ss_pred ccccC------CCCCCCCCCcceeeehhhHHHHHHHHHHHH-HHHHHHhHcCCC--CCCCc-ccccc------CCCCccC
Q 004218 383 LCLHL------GCENSSSHGRRRIIIYIIVAIIAIIAGCFL-IFWLIIVRKGKA--KPIGV-STLFK------HSPQMIS 446 (767)
Q Consensus 383 ~c~~~------~c~~~~~~~~~~~~~~i~~~~~~~i~~~~~-~~~~~~~r~~~~--~~~~~-~~~~~------~~~~~~~ 446 (767)
.|+.. +|..... .. ..+++++++++++++++++ +++++++++++. +.... ..... .....++
T Consensus 607 lc~~~~~~~~~~c~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (968)
T PLN00113 607 LCGGDTTSGLPPCKRVRK-TP-SWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSIT 684 (968)
T ss_pred ccCCccccCCCCCccccc-cc-eeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhh
Confidence 99743 3532211 11 1222222222222222222 222222322211 11100 00000 0011233
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEEEe-CCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc
Q 004218 447 YDELRRATGNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF 525 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 525 (767)
++++ ...|+..+.||+|+||.||+|+. .++..||||.+..... ...+|++++++++||||++++++|..
T Consensus 685 ~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~--- 754 (968)
T PLN00113 685 INDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS--- 754 (968)
T ss_pred HHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc---
Confidence 3333 35678888999999999999997 4689999998853322 22356889999999999999999754
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
....++||||+++|+|.++++. ++|.++.+++.|+++|++|||..+.++|+||||||+||+++.++.++
T Consensus 755 --~~~~~lv~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~ 823 (968)
T PLN00113 755 --EKGAYLIHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPH 823 (968)
T ss_pred --CCCCEEEEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceE
Confidence 3456999999999999999952 88999999999999999999966556999999999999999998888
Q ss_pred EccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHh
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 685 (767)
+. ||.+..... .....||..|+|||++.+..++.++|||||||++|||+||+.||+..........+|.
T Consensus 824 ~~-~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 824 LR-LSLPGLLCT----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred EE-ecccccccc----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 75 655433211 0123578999999999999999999999999999999999999976555555566666
Q ss_pred hhhcccc-hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 686 ESNFPKN-AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 686 ~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
...+... .....++.+...... ..++..++++ ++.+||+.||++||||+|+++.|+++.+..
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVSV-------NQNEIVEVMN-LALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHhcCccchhheeCccccCCCCc-------cHHHHHHHHH-HHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 5433321 222223222111100 1122333444 888999999999999999999999886643
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-48 Score=407.08 Aligned_cols=290 Identities=41% Similarity=0.669 Sum_probs=237.7
Q ss_pred CCCccCHHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeee
Q 004218 441 SPQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSC 520 (767)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 520 (767)
....|++++++.+|++|...+.||+|+||.||+|...+|+.||||++........++|.+|+.++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56679999999999999999999999999999999998899999988654332146699999999999999999999999
Q ss_pred ecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC
Q 004218 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE 600 (767)
Q Consensus 521 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~ 600 (767)
.+.+. ..++|||||++|+|.++++..... +++|..+.+||.++|+||+|||+.++++||||||||+|||+|+
T Consensus 141 ~e~~~----~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 141 LEGGE----HRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred ecCCc----eEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 75331 469999999999999999876531 5999999999999999999999998889999999999999999
Q ss_pred CCceEEccccchhhhhhhcCCCccccccccc-cCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcc-cCC
Q 004218 601 DMTAKVGDFGLARSLLERIGNQSSISSTHVL-KGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESF-AGE 678 (767)
Q Consensus 601 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~ 678 (767)
++++||+|||+|+..... .. ..... .||.+|+|||+...+..+.|+||||||+++.|++||+.|.+... ...
T Consensus 213 ~~~aKlsDFGLa~~~~~~----~~--~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~ 286 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEG----DT--SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGE 286 (361)
T ss_pred CCCEEccCccCcccCCcc----cc--ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccc
Confidence 999999999999654321 00 00111 69999999999999999999999999999999999999887654 334
Q ss_pred cchhhHhhhhccc-chhhhccHHHHH-hhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 679 VSLVKWVESNFPK-NAQQVLDRELRQ-LMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 679 ~~~~~~~~~~~~~-~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
..+..|+...... ...+++|+.+.. ... ..+++.+++. ++.+|++.+|.+||+|.||+++|+.+..
T Consensus 287 ~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~--------~~~~~~~~~~-~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 287 LSLVEWAKPLLEEGKLREIVDPRLKEGEYP--------DEKEVKKLAE-LALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred ccHHHHHHHHHHCcchhheeCCCccCCCCC--------hHHHHHHHHH-HHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 4578887555444 356666665542 110 0144555555 8999999999999999999999966554
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-48 Score=374.23 Aligned_cols=247 Identities=26% Similarity=0.398 Sum_probs=203.0
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce-eeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME-FLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~l 533 (767)
.+..+.||+|..|+||++.++ +++.+|+|++... .+...+++.+|+++++..+||+||++||+|.. .. .+.|
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~isI 155 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEEISI 155 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCceEEe
Confidence 345578999999999999987 4889999999544 33456789999999999999999999999653 33 5899
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||++|||++++...++ +++....+|+.++++||.|||+ + +||||||||+|||++..|++||||||.+
T Consensus 156 ~mEYMDgGSLd~~~k~~g~------i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGVS 226 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGR------IPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGVS 226 (364)
T ss_pred ehhhcCCCCHHHHHhhcCC------CCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEecccccc
Confidence 9999999999999987543 9999999999999999999996 6 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc---CCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA---GEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~---~~~~~~~~~~~~~ 689 (767)
+.+.+. .....+||..|||||.+.+..|+.++||||||++++|+++|+.||..... ....+..++-...
T Consensus 227 ~~lvnS--------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p 298 (364)
T KOG0581|consen 227 GILVNS--------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP 298 (364)
T ss_pred HHhhhh--------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC
Confidence 987554 22456799999999999999999999999999999999999999976422 2223333333333
Q ss_pred ccchhh-hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQ-VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|+..+. .+.++++. ++..||++||.+|||++|++++
T Consensus 299 pP~lP~~~fS~ef~~----------------------FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 299 PPRLPEGEFSPEFRS----------------------FVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCcccCCHHHHH----------------------HHHHHhcCCcccCCCHHHHhcC
Confidence 333322 24444333 5557999999999999999876
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1e-45 Score=381.12 Aligned_cols=263 Identities=32% Similarity=0.459 Sum_probs=207.5
Q ss_pred CCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcc--hhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 458 SHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGT--WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 458 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
.+.+.+|+|+||+||+|.++....||||++....... .+.|.+|+.+|.+++|||||+++|+|.... ...++||
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~~iVt 119 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSLCIVT 119 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CceEEEE
Confidence 3445599999999999999844449999996543222 568999999999999999999999986532 1579999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-eEeecCCCCCeeeCCCC-ceEEccccchh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVP-IVHCDLKPGNILLDEDM-TAKVGDFGLAR 613 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~Dlkp~NIl~~~~~-~~kl~Dfg~a~ 613 (767)
||+++|+|.++++..+ ...+++..+..|+.|||+|+.|||++ + ||||||||+|||++.++ ++||+|||+++
T Consensus 120 Ey~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 120 EYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred EeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 9999999999998741 24499999999999999999999999 7 99999999999999997 99999999998
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccC--CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGL--GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
...... .......||+.|||||++. ...|+.|+||||||+++|||+||+.||..... .......+....+.
T Consensus 193 ~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp 265 (362)
T KOG0192|consen 193 EKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRP 265 (362)
T ss_pred eecccc------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCC
Confidence 654321 1123367999999999999 56899999999999999999999999987654 22222222222222
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHHhhcCC
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKILLKRRQ 760 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~~~~ 760 (767)
..+....+.+.. ++.+||+.||+.||++.|++..|+.+........+
T Consensus 266 ~~p~~~~~~l~~----------------------l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~~~ 312 (362)
T KOG0192|consen 266 PIPKECPPHLSS----------------------LMERCWLVDPSRRPSFLEIVSRLESIMSHISSAGP 312 (362)
T ss_pred CCCccCCHHHHH----------------------HHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcccCc
Confidence 222223322222 56679999999999999999999999887765433
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-46 Score=368.45 Aligned_cols=254 Identities=25% Similarity=0.343 Sum_probs=200.7
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-------cchhhHHHHHHHHhcCCCCCceeEEeeeecCC
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-------GTWKSFFAECEALRNTRHRNLVKLITSCSSLD 524 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 524 (767)
..+.|.+.+.||+|+||.|-+|..+ +|+.||||++.+... .......+|+++|++++|||||++++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f---- 245 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF---- 245 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee----
Confidence 4567888999999999999999965 599999999964311 1223457999999999999999999995
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC---
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED--- 601 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~--- 601 (767)
...+..|+||||++||+|.+.+-..+. +.+.....+++|++.|+.|||++ ||+||||||+|||+..+
T Consensus 246 -~~~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 246 -EVPDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAED 315 (475)
T ss_pred -ecCCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcc
Confidence 455566999999999999999987654 78888899999999999999999 99999999999999866
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCC---CCcccchhhhHHHHHHHhCCCCCCCcccCC
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSPTHESFAGE 678 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 678 (767)
..+||+|||+|+..++ ...+.+.+||+.|.|||++.+... ..++|+||+||++|-+++|.+||.+.....
T Consensus 316 ~llKItDFGlAK~~g~-------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSGE-------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred eEEEecccchhhcccc-------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 6799999999997643 344577899999999999987654 347899999999999999999997754433
Q ss_pred cchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 679 VSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.-..+...+.++.. +.. +..+.+-..++|.+||..||++|||++|++++
T Consensus 389 sl~eQI~~G~y~f~----------------p~~----w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 389 SLKEQILKGRYAFG----------------PLQ----WDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cHHHHHhcCccccc----------------Chh----hhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 22222222222221 111 22222223337779999999999999999986
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-46 Score=384.28 Aligned_cols=247 Identities=28% Similarity=0.399 Sum_probs=206.1
Q ss_pred cCCCCCCccccccceEEEEEEe-CCCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.+|...+.||+|||+.||.+++ .+|+.||+|++++. .....+...+|+++.++++|||||+++++ |++..+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 5799999999999999999997 67999999999653 45567789999999999999999999999 678889
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+|+|.|+|+.++|..+++..+ ++++.++..+++||+.||.|||++ +|+|||||..|++++++.++||+|||
T Consensus 93 VYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 999999999999999998543 499999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCC-cchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-VSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~ 689 (767)
+|..+..+.. ...+.+||+.|.|||++....++..+||||+||++|.|+.|++||+...-.+ ..-.+.....+
T Consensus 164 LAt~le~~~E------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~ 237 (592)
T KOG0575|consen 164 LATQLEYDGE------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSM 237 (592)
T ss_pred eeeeecCccc------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccc
Confidence 9998754322 2356789999999999999999999999999999999999999997642111 11111111111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|. . +..-.+++|.++|+.||.+|||+++|+.+
T Consensus 238 P~----~----------------------ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 238 PS----H----------------------LSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cc----c----------------------cCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 1 11222337778999999999999999875
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-47 Score=355.38 Aligned_cols=261 Identities=26% Similarity=0.390 Sum_probs=207.3
Q ss_pred cCCCCCCccccccceEEEEEE-eCCCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
..|.+.++||+|.||+||++. ..+|..||.|.+... +....+....|+.+|++++|||||+++++-. .++...+
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchhh
Confidence 357788999999999999999 457999999988644 3445677889999999999999999998532 2334448
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC-CeEeecCCCCCeeeCCCCceEEcccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV-PIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+||||||++|+|.++++..+.. .+.+++.++|+++.|++.||.++|+..+. -|+||||||.||+++.+|.+||+|||
T Consensus 96 nivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence 9999999999999999876543 56699999999999999999999994322 28999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHh-hhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWV-ESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~ 689 (767)
+++.+... ....+..+||+.||+||.+.+.+|+.++||||+||++|||+.-++||... ....+.+.+ ...+
T Consensus 174 L~r~l~s~------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 174 LGRFLSSK------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQGDY 245 (375)
T ss_pred hHhHhcch------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHcCCC
Confidence 99987543 33446688999999999999999999999999999999999999999764 222222222 2234
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
|+-+.+..+..+.. ||..|+..||+.||+...++..+..
T Consensus 246 ~~~p~~~YS~~l~~----------------------li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRE----------------------LINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCCcHHHhhhHHHH----------------------HHHHHccCCcccCCCcchHHHHHHH
Confidence 33333433333322 6667999999999997666655544
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-46 Score=363.22 Aligned_cols=203 Identities=33% Similarity=0.552 Sum_probs=180.2
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
..++|...+.||+|+||+||+|+++. +..||||.+... ..+..+.+..|+.+|+.++|||||.+++++ ..++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~-----~~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI-----EDDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE-----ecCC
Confidence 34688899999999999999999764 899999999665 445567788999999999999999999995 4566
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC------Cc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED------MT 603 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~------~~ 603 (767)
++|+|||||.||+|.+|++..+. +++..+..++.|+|.||++||++ +||||||||+|||++.. -.
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCce
Confidence 88999999999999999998754 99999999999999999999999 99999999999999864 46
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
+||+|||+|+.+.+. ....+.+|++.|||||++...+|+.|+|+||+|+++|+|++|+.||+....
T Consensus 154 LKIADFGfAR~L~~~-------~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~ 219 (429)
T KOG0595|consen 154 LKIADFGFARFLQPG-------SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP 219 (429)
T ss_pred EEecccchhhhCCch-------hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence 899999999987532 233567899999999999999999999999999999999999999976443
No 9
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.5e-44 Score=428.42 Aligned_cols=375 Identities=34% Similarity=0.531 Sum_probs=303.2
Q ss_pred CCCccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEE
Q 004218 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMY 80 (767)
Q Consensus 1 l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 80 (767)
|++|++|+|++|.+++.+|..+. .+++|++|+|++|.+.+.+|..++++++|++|+|++|.+++.+|..++++++|++|
T Consensus 187 l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 265 (968)
T PLN00113 187 LTSLEFLTLASNQLVGQIPRELG-QMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265 (968)
T ss_pred CcCCCeeeccCCCCcCcCChHHc-CcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEE
Confidence 57899999999999988998876 59999999999999999999999999999999999999999999999999999999
Q ss_pred eecCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEE
Q 004218 81 NIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLN 160 (767)
Q Consensus 81 ~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~ 160 (767)
++++|++.+ ..+..+.++++|+.|++++|++.+.+|..+..+++ |++|++++|.+.+..|..+..+++|+.|+
T Consensus 266 ~L~~n~l~~------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 338 (968)
T PLN00113 266 FLYQNKLSG------PIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQN-LEILHLFSNNFTGKIPVALTSLPRLQVLQ 338 (968)
T ss_pred ECcCCeeec------cCchhHhhccCcCEEECcCCeeccCCChhHcCCCC-CcEEECCCCccCCcCChhHhcCCCCCEEE
Confidence 999999864 45566778888888888888888888888888877 88888888888878888888888888888
Q ss_pred CcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCC
Q 004218 161 LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNG 240 (767)
Q Consensus 161 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 240 (767)
+++|.+.+..|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|++++
T Consensus 339 L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~ 418 (968)
T PLN00113 339 LWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG 418 (968)
T ss_pred CcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee
Confidence 88888887777778888888888888888777667666666666666666666665555555555666666666655555
Q ss_pred CCChhhcccccccceeecccccCCCCCchhhcC-----------------------CCceeEEEccCCCCCCCCCccccc
Q 004218 241 NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGM-----------------------LGNVVTIDLSANGLSGNLPNSFKN 297 (767)
Q Consensus 241 ~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~-----------------------l~~L~~L~ls~n~l~~~~~~~~~~ 297 (767)
.+|..+..++.+ ..+++++|.+++..+..+.. .++|+.|++++|++++..|..+..
T Consensus 419 ~~p~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~ 497 (968)
T PLN00113 419 ELPSEFTKLPLV-YFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGS 497 (968)
T ss_pred ECChhHhcCCCC-CEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhh
Confidence 555555555554 22345555444444333322 356777778888888888888889
Q ss_pred CcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCC-cccccccccc
Q 004218 298 CKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPRE-GIFRHTSMVH 376 (767)
Q Consensus 298 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~~~ 376 (767)
+++|+.|++++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|++++|++++..|.. ..+..+..+.
T Consensus 498 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ 577 (968)
T PLN00113 498 LSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVN 577 (968)
T ss_pred hhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEe
Confidence 999999999999999999999999999999999999999999999999999999999999999877765 4567788899
Q ss_pred ccCCcCcc
Q 004218 377 LEGNPKLC 384 (767)
Q Consensus 377 l~~Np~~c 384 (767)
+.+|+..+
T Consensus 578 ls~N~l~~ 585 (968)
T PLN00113 578 ISHNHLHG 585 (968)
T ss_pred ccCCccee
Confidence 99998765
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.6e-45 Score=340.42 Aligned_cols=272 Identities=21% Similarity=0.299 Sum_probs=199.7
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
+.|+...++|+|+||.||++++++ |+.||||++... ++...+-.++|+++|++++|||+|.++++ |+....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhccee
Confidence 457788899999999999999876 999999999432 22334567899999999999999999999 5677889
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++|+|||+. ++.+-++... .+++...+.++++|++.|+.|+|++ +++||||||+||+++.+|.+||||||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p-----~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYP-----NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhcc-----CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999988 5555554443 3499999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhH--hhhh
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKW--VESN 688 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~--~~~~ 688 (767)
|+.+.... ...+..+.|.+|+|||.+.+ .+|+..+||||.||++.||++|.+-|.+...-+. +... .-+.
T Consensus 148 AR~L~~pg------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ-Ly~I~ktLG~ 220 (396)
T KOG0593|consen 148 ARTLSAPG------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ-LYLIRKTLGN 220 (396)
T ss_pred hHhhcCCc------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH-HHHHHHHHcc
Confidence 99875321 12244568999999999887 6899999999999999999999998865433221 1111 1111
Q ss_pred cccchhhhccH--HHHHhhhcc---hhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDR--ELRQLMMSS---ESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~--~l~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+.+...+++.. .+....-.. .+....-...+...+-+++..|++.||++|++.+|++.+
T Consensus 221 L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 221 LIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred cCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 21111111110 000000000 011111111122334447779999999999999998864
No 11
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-44 Score=348.69 Aligned_cols=201 Identities=35% Similarity=0.482 Sum_probs=179.8
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
...|++.++||+|+||.||.++.++ ++.+|+|++++. .....+...+|..+|.+++||.||+++.. |++.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~~ 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTEE 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccCC
Confidence 4578999999999999999999664 899999999654 33456778899999999999999999987 67888
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
.+|+|+||+.||.|..++++.+. +++..+.-++..|+.||.|||+. |||||||||+|||+|.+|+++|+||
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~------F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGR------FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCC------cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 99999999999999999987654 99999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|+++..... ...+.+++||+.|||||++.+..|+.++|+||+|+++|||++|.+||...
T Consensus 170 gL~k~~~~~------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 170 GLCKEDLKD------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred ccchhcccC------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 999854322 22345689999999999999999999999999999999999999999663
No 12
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-44 Score=363.29 Aligned_cols=257 Identities=31% Similarity=0.431 Sum_probs=210.1
Q ss_pred CCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
.++.++.||+|.||.||.|.++...+||+|.+... .-..+.|.+|+++|++++|++||+++++|... +.++|||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEEEE
Confidence 34556889999999999999997779999998643 33457888999999999999999999998642 2579999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
|||+.|+|.++++... +..+...+.+.++.|||+|++||+++ ++|||||.++||||+++..+||+|||+|+..
T Consensus 281 E~m~~GsLl~yLr~~~----~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTRE----GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EecccCcHHHHhhhcC----CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEccccccccc
Confidence 9999999999998732 34589999999999999999999999 9999999999999999999999999999955
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
.++...... ...-...|.|||.+..+.++.||||||||++||||+| |+.||.... .....+.+...++-..+
T Consensus 354 ~d~~Y~~~~-----~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--n~ev~~~le~GyRlp~P 426 (468)
T KOG0197|consen 354 GDDEYTASE-----GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--NEEVLELLERGYRLPRP 426 (468)
T ss_pred CCCceeecC-----CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--HHHHHHHHhccCcCCCC
Confidence 443322221 1123567999999999999999999999999999999 888875532 23345555666655556
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKI 754 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 754 (767)
+.+++.+.+ ++..||+.+|++|||++.+...++++...
T Consensus 427 ~~CP~~vY~----------------------lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 427 EGCPDEVYE----------------------LMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCHHHHH----------------------HHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 666666554 55579999999999999999888877543
No 13
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=349.72 Aligned_cols=264 Identities=31% Similarity=0.424 Sum_probs=202.7
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
..+|...+.||+|+||+||++...+ |...|||.+........+.+.+|+++|++++|||||+++|.....+ . ..++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-DEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-eeeE
Confidence 3467788999999999999999765 8999999987654333677899999999999999999999743211 1 4689
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-CCceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE-DMTAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~ 611 (767)
+.|||+++|+|.+++...+. .+++..+..+++|+++||+|||++ |||||||||+|||++. ++.+||+|||.
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 99999999999999987652 499999999999999999999999 9999999999999999 79999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
++..... ...........||+.|||||++..+ ...+++||||+||++.||+||++||.........+.........
T Consensus 165 a~~~~~~---~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~ 241 (313)
T KOG0198|consen 165 AKKLESK---GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSL 241 (313)
T ss_pred ccccccc---cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCC
Confidence 9876531 1111223456799999999999853 34469999999999999999999997631111111111111111
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
+.++..++.. .++++..|+..||++||||++++++.-...+
T Consensus 242 P~ip~~ls~~----------------------a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 242 PEIPDSLSDE----------------------AKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred CCCCcccCHH----------------------HHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1222223322 2236668999999999999999998765543
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-43 Score=353.86 Aligned_cols=257 Identities=28% Similarity=0.403 Sum_probs=206.7
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCc
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDF 525 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 525 (767)
.+....|.+.+.||.|+|++|++|+.. +++.||||++.+. .....+-+..|-.+|.++ .||.|++++.. |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 344567889999999999999999965 4999999998643 233445567888899999 89999999988 6
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
.+...+|+|+||+++|+|.+++...+. +++..+..++.+|+.|++|||++ |||||||||+|||+|++|++|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 677889999999999999999998765 99999999999999999999999 999999999999999999999
Q ss_pred EccccchhhhhhhcCCC-----c--cccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCC
Q 004218 606 VGDFGLARSLLERIGNQ-----S--SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE 678 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~-----~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 678 (767)
|+|||.|+.+.+..... . .......++||..|.+||++.....++.+|+|||||++|+|+.|++||....+-
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney- 293 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY- 293 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-
Confidence 99999999887654331 1 111124588999999999999999999999999999999999999999664221
Q ss_pred cchhhHh--hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 679 VSLVKWV--ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 679 ~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
..+.+.+ ...+|+..++ .+++|+.+.|..||.+|+|++|+.++-
T Consensus 294 liFqkI~~l~y~fp~~fp~--------------------------~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 294 LIFQKIQALDYEFPEGFPE--------------------------DARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHHHhcccCCCCCCH--------------------------HHHHHHHHHHccCccccccHHHHhhCc
Confidence 1122222 2223333221 222355677888999999999988763
No 15
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-43 Score=356.84 Aligned_cols=250 Identities=24% Similarity=0.352 Sum_probs=204.6
Q ss_pred cCCCCCCccccccceEEEEEEe-CCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
..|+....||+|+.|.||.|.. .+++.||||++........+-+.+|+.+|+..+|+|||.+++.|. .++.+|+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGDELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----ccceeEE
Confidence 4678888999999999999994 458899999998777777788899999999999999999999854 3467899
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
|||||+||+|.|.+.... +++.++..|++++++||+|||.+ ||+|||||.+||+++.+|.+||+|||++.
T Consensus 348 VMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 999999999999998765 99999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
.+..... .....+||+.|||||+.....|+++.||||||++++||+-|.+||-...+ ......+....
T Consensus 418 qi~~~~~------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P--lrAlyLIa~ng---- 485 (550)
T KOG0578|consen 418 QISEEQS------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP--LRALYLIATNG---- 485 (550)
T ss_pred ccccccC------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh--HHHHHHHhhcC----
Confidence 7755432 33567899999999999999999999999999999999999999854211 11111111111
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.......+.+...++++..+||..||.+||+|.|+|++
T Consensus 486 ----------------~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 486 ----------------TPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred ----------------CCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11111122222333335558999999999999999975
No 16
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=342.33 Aligned_cols=265 Identities=25% Similarity=0.382 Sum_probs=208.3
Q ss_pred hcCCCCCCccccccceEEEEEEe-CCCcEEEEEEeeccCCcc-hhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIESTGT-WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.+.|+..++||.|..++||+|+. ..++.||||++..+.... .+.+.+|+..|+.++||||++++.. |..+..+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~s-----Fvv~~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCS-----FVVDSEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEE-----EEeccee
Confidence 46799999999999999999994 458999999997765443 5889999999999999999999988 4566778
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
|+||+||.+||+.+++...-. .++++..+..|.+++++||.|||++ |.||||||+.||||+++|.+||+|||.
T Consensus 100 WvVmpfMa~GS~ldIik~~~~----~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYP----DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred EEeehhhcCCcHHHHHHHHcc----ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCcee
Confidence 999999999999999987653 4599999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
+..+.+.. ...........||+.|||||++.. ..|+.|+||||||++..|+.+|..||....+-.+-+. ......
T Consensus 173 sa~l~~~G--~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~-tLqn~p 249 (516)
T KOG0582|consen 173 SASLFDSG--DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL-TLQNDP 249 (516)
T ss_pred eeeecccC--ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH-HhcCCC
Confidence 87766533 222222266789999999999543 4689999999999999999999999977554333222 222222
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|.......+..-... +...++.++..||++||.+||||++++++
T Consensus 250 p~~~t~~~~~d~~k~--------------~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 250 PTLLTSGLDKDEDKK--------------FSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CCcccccCChHHhhh--------------hcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 211111111111111 11123336778999999999999999864
No 17
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-42 Score=343.90 Aligned_cols=264 Identities=28% Similarity=0.380 Sum_probs=202.3
Q ss_pred cCCCCCCccccccceEEEEEEe-CCCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
..|+..+.||+|.||.||+|++ .+|+.||+|.+..+. ++...-..+||.+|++++||||+++.+...+ .....+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~---~~~~si 193 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS---KLSGSI 193 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe---cCCceE
Confidence 4577778999999999999995 469999999987664 4556677899999999999999999998764 245688
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
|+|+|||+. +|..++.... ..+++.++..+++|++.||+|+|++ ||+|||||.+|||||.+|.+||+|||+
T Consensus 194 YlVFeYMdh-DL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 194 YLVFEYMDH-DLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred EEEEecccc-hhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccc
Confidence 999999988 9999887643 3499999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh-------
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK------- 683 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~------- 683 (767)
|+++....... .+..+-|.+|+|||.+.|. .|+.+.|+||.|||+.||++|++.|....+-+ ++..
T Consensus 265 Ar~y~~~~~~~-----~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEve-Ql~kIfklcGS 338 (560)
T KOG0600|consen 265 ARFYTPSGSAP-----YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVE-QLHKIFKLCGS 338 (560)
T ss_pred eeeccCCCCcc-----cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHH-HHHHHHHHhCC
Confidence 99775543222 3445679999999998875 68999999999999999999999987643221 1111
Q ss_pred -----Hhhhhcccc----hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 684 -----WVESNFPKN----AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 684 -----~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|.....|.. ........++..+...+. ..+. |+..+|..||.+|.||.++++.
T Consensus 339 P~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~----------~~l~-Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 339 PTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPA----------SALD-LLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred CChhccccccCCcccccCCCCcccchHHHHhccCCH----------HHHH-HHHHHhccCccccccHHHHhcC
Confidence 111111110 111112222222222111 1222 6668899999999999998863
No 18
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-43 Score=350.03 Aligned_cols=263 Identities=24% Similarity=0.321 Sum_probs=200.0
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhh--HHHHHHHHhcCC-CCCceeEEeeeecCCcccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKS--FFAECEALRNTR-HRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 528 (767)
..++|.+.++||.|.||.||+|+.. +|..||||.++..-.. +++ -++|++.|+++. ||||+++.+++.+ .+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d----~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRD----ND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhc----cC
Confidence 3468999999999999999999954 5899999999654333 333 358999999998 9999999999643 23
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+++|||||+. +|+++++.++ +.+++.++..|++||++||+|+|++ |+.|||+||+|||+.....+||+|
T Consensus 83 ~~L~fVfE~Md~-NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaD 153 (538)
T KOG0661|consen 83 RILYFVFEFMDC-NLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIAD 153 (538)
T ss_pred ceEeeeHHhhhh-hHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecc
Confidence 389999999976 9999998764 4599999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccC-CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
||+|+..... ...+..+.|.+|+|||++. .+.|+.+.|+||+|||++|+.+-++-|.+..+-+ ++.+...-
T Consensus 154 FGLARev~Sk-------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~KIc~V 225 (538)
T KOG0661|consen 154 FGLAREVRSK-------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYKICEV 225 (538)
T ss_pred cccccccccC-------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHHHHHH
Confidence 9999976443 2335667899999999865 5668999999999999999999998886543221 12222111
Q ss_pred hc-cc--ch--------------hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 688 NF-PK--NA--------------QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 688 ~~-~~--~~--------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
-. |. .+ ++.....+..++.. +..+.++ ++.+|+.+||.+||||+|++++-
T Consensus 226 LGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~----------~s~~~~~-li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 226 LGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPN----------ASSEAAS-LIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred hCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcc----------cCHHHHH-HHHHHhcCCCccCccHHHHhcCc
Confidence 00 00 00 11111112222211 2223333 77789999999999999999863
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.3e-42 Score=316.78 Aligned_cols=270 Identities=23% Similarity=0.315 Sum_probs=200.0
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.+|...+++|+|.||.||+|++. +|+.||||.++... .+......+|++.|+.++|+||+.++++ |...+.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 47888899999999999999954 59999999986542 2334568899999999999999999999 5667778
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
.+|+|||+. +|+..++... ..++..++..++.++++|++|||++ .|+||||||.|+|++++|.+||+|||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEeccc-cHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 999999987 9999998654 4599999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh---
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES--- 687 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--- 687 (767)
|+.+........ ..+-|.+|+|||.+.|. .|+...||||.|||+.||+.|.+-|..... -.++......
T Consensus 148 Ar~f~~p~~~~~------~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LGT 220 (318)
T KOG0659|consen 148 ARFFGSPNRIQT------HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALGT 220 (318)
T ss_pred hhccCCCCcccc------cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcCC
Confidence 998866533221 22568999999988765 589999999999999999998776644321 1122221111
Q ss_pred hcccchhhhcc-HHHHH--hhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 NFPKNAQQVLD-RELRQ--LMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~~~~~~~~~~~-~~l~~--~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.-+..+++... +...+ .+...+.. .-+..+-.+.++ ++..|+.+||.+|+|++|++++
T Consensus 221 P~~~~WP~~~~lpdY~~~~~~P~~~~~-~lf~aas~d~ld-Ll~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 221 PTPDQWPEMTSLPDYVKIQQFPKPPLN-NLFPAASSDALD-LLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCcccCccccccccHHHHhcCCCCccc-cccccccHHHHH-HHHhhhccCchhcccHHHHhcc
Confidence 11111111111 00000 11110000 011122222333 7779999999999999999876
No 20
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=318.29 Aligned_cols=199 Identities=31% Similarity=0.443 Sum_probs=179.1
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.+|+..+.||.|+||.|.+++.+. |..+|+|++++..- ...+...+|..+|+.+.||+++++++. +.+...
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t-----~~d~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGT-----FKDNSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEe-----eccCCe
Confidence 467888999999999999999764 88999999975532 345567789999999999999999998 456778
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||++||.|.+++++.++ +++..+..+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||
T Consensus 119 lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEecc
Confidence 8999999999999999998765 99999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
+|+.... .+.+.+||+.|+|||++...+++.++|+||||+++|||+.|.+||....+
T Consensus 190 FAK~v~~---------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 190 FAKRVSG---------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred ceEEecC---------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 9987533 25678999999999999999999999999999999999999999977544
No 21
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=344.23 Aligned_cols=247 Identities=30% Similarity=0.438 Sum_probs=201.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|.+.+.||+|+||.||+|+-+ +.+.||+|.+++. ..+..+.+.+|+++++.++||||+.++++ ++...++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 57888999999999999999965 4889999999654 33456778999999999999999999999 6778889
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
|+|+||+.| +|..++..... ++++.+..++++++.||.|||+. +|.|||+||.||+++..|.+|+||||+
T Consensus 77 ~vVte~a~g-~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999977 99999987654 99999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
|+..... ....+.+.||+-|||||...+.+|+..+|.||+||++||+++|++||... ....+.+.+..+.+.
T Consensus 147 Ar~m~~~------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--si~~Lv~~I~~d~v~ 218 (808)
T KOG0597|consen 147 ARAMSTN------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--SITQLVKSILKDPVK 218 (808)
T ss_pred hhhcccC------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--HHHHHHHHHhcCCCC
Confidence 9876442 12234567999999999999999999999999999999999999999542 111222222221111
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+ ...+..++.. ++...+.+||.+|.|..+++.+
T Consensus 219 ~-------------------p~~~S~~f~n----fl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 219 P-------------------PSTASSSFVN----FLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred C-------------------cccccHHHHH----HHHHHhhcChhhcccHHHHhcC
Confidence 1 1122233333 4447888999999999999875
No 22
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-41 Score=362.68 Aligned_cols=266 Identities=28% Similarity=0.429 Sum_probs=211.0
Q ss_pred hcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
..+....+.||+|+||.||+|+.. +...||||.++..... ..++|.+|++.+..++|||||+++|+|..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~---- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE---- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc----
Confidence 345556788999999999999853 2467999999766555 78899999999999999999999999864
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCC----C----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNE----H----GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
++.+++|+|||..|||.+||+...... . ..+++..+.+.||.|||.|+.||-++ .+|||||..+|+||
T Consensus 561 -~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 561 -GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLV 636 (774)
T ss_pred -CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhcee
Confidence 455699999999999999998655431 1 23489999999999999999999999 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAG 677 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 677 (767)
.++..|||+|||+++......+..... ...-..+|||||.+..++|+++||||||||++||+++ |+.||......
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk~~~----~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~ 712 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYKVRG----NTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ 712 (774)
T ss_pred ccceEEEecccccchhhhhhhhhcccC----CceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH
Confidence 999999999999999776554433221 1123578999999999999999999999999999998 88998764333
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
+ ..+.+...---..++....+++. |+..||+.+|++||+++||-..|+.....-
T Consensus 713 E--VIe~i~~g~lL~~Pe~CP~~vY~----------------------LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 713 E--VIECIRAGQLLSCPENCPTEVYS----------------------LMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred H--HHHHHHcCCcccCCCCCCHHHHH----------------------HHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 2 22222221112233444444433 666799999999999999999998776543
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=347.50 Aligned_cols=250 Identities=30% Similarity=0.405 Sum_probs=198.6
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc----CC-cchhhHHHHHHHHhcCC-CCCceeEEeeeecCC
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE----ST-GTWKSFFAECEALRNTR-HRNLVKLITSCSSLD 524 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 524 (767)
...++|.+.+.||+|+||.|+.|.+. +++.||+|+++.. .. ...+.+.+|+.+++.++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 45679999999999999999999854 5899999977543 11 23456678999999998 999999999954
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-Cc
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-MT 603 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~ 603 (767)
....+++||||+.||+|.+++....+ +.+.++..+++|++.|++|+|++ ||+||||||+||+++.+ +.
T Consensus 91 --t~~~~~ivmEy~~gGdL~~~i~~~g~------l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 91 --TPTKIYIVMEYCSGGDLFDYIVNKGR------LKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred --cCCeEEEEEEecCCccHHHHHHHcCC------CChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 44558999999999999999987433 89999999999999999999999 99999999999999999 99
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC-C-CCcccchhhhHHHHHHHhCCCCCCCcccCCcch
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-P-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 681 (767)
+||+|||++.... .........+||+.|+|||++.+.. | +.++||||+|+++|.|++|+.||++...... .
T Consensus 160 ~Kl~DFG~s~~~~------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l-~ 232 (370)
T KOG0583|consen 160 LKLSDFGLSAISP------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL-Y 232 (370)
T ss_pred EEEeccccccccC------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH-H
Confidence 9999999998753 1112335678999999999999877 7 5789999999999999999999987221110 1
Q ss_pred hhHhhhhcccchhhhc-cHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 682 VKWVESNFPKNAQQVL-DRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 682 ~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
.+.....+ ..+..+ .+.. .+++.+|+..||.+|+|+.|+++
T Consensus 233 ~ki~~~~~--~~p~~~~S~~~----------------------~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 233 RKIRKGEF--KIPSYLLSPEA----------------------RSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred HHHhcCCc--cCCCCcCCHHH----------------------HHHHHHHcCCCcccCCCHHHHhh
Confidence 11111111 112222 2222 22667899999999999999993
No 24
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=311.06 Aligned_cols=273 Identities=24% Similarity=0.273 Sum_probs=214.2
Q ss_pred HHhcCCCCCCccccccceEEEEEE-eCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
...++|++.+.+|+|||+-||+++ ..+++.||+|++.....++.+..++|++..++++|||++++++++....-+....
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 345789999999999999999999 5568899999998777778889999999999999999999999986654445667
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.|++++|+..|||.+.+...... +..+++.+++.|+.++++||++||+. .++++||||||.||++++.+.++|.|||
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~k--g~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIK--GNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhc--CCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 89999999999999999876543 45699999999999999999999998 4469999999999999999999999999
Q ss_pred chhhhhhhcCCCc---cccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhH
Q 004218 611 LARSLLERIGNQS---SISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 611 ~a~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 684 (767)
.++...-...... ..........|..|+|||.+. +...++++|||||||++|+|+.|..||+........+.-.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 9875432211111 111112234789999999875 4456899999999999999999999998765543332221
Q ss_pred h---hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 685 V---ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 685 ~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
+ ...+|...+ .. +.+. +++.+|++.||.+||++.|++..++..
T Consensus 255 v~n~q~s~P~~~~--ys------------------e~l~----~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 255 VQNAQISIPNSSR--YS------------------EALH----QLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eeccccccCCCCC--cc------------------HHHH----HHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1 112222111 12 2222 266689999999999999999998764
No 25
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=348.21 Aligned_cols=270 Identities=28% Similarity=0.449 Sum_probs=207.0
Q ss_pred CHHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecC
Q 004218 446 SYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSL 523 (767)
Q Consensus 446 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 523 (767)
+.++.....+++.+...||+|.||+||+|.|. | .||||++..+ .++..+.|.+|+.++++-+|.||+-+.|+|...
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc-c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 33555566667788899999999999999986 3 5999999765 334678899999999999999999999997543
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT 603 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~ 603 (767)
. . .||+.+|+|-+|+.+++..+. .++..+...||+|||+|+.|||.+ +|||||||..||++.+++.
T Consensus 461 ~-----~-AIiTqwCeGsSLY~hlHv~et-----kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~k 526 (678)
T KOG0193|consen 461 P-----L-AIITQWCEGSSLYTHLHVQET-----KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLK 526 (678)
T ss_pred c-----e-eeeehhccCchhhhhccchhh-----hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCc
Confidence 2 2 899999999999999987653 489999999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC---CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcc
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG---EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVS 680 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 680 (767)
|||+|||++..-....+. .......|...|||||+++. .+|++.+||||||+|+|||+||..||..... +..
T Consensus 527 VkIgDFGLatvk~~w~g~----~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~-dqI 601 (678)
T KOG0193|consen 527 VKIGDFGLATVKTRWSGE----QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR-DQI 601 (678)
T ss_pred EEEecccceeeeeeeccc----cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh-hhe
Confidence 999999999654332111 11233457889999999874 4689999999999999999999999973222 221
Q ss_pred hhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 681 LVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
+...-.+....+. .... .++- +.+++|+..||.++|++||++.+++..|+.+....
T Consensus 602 ifmVGrG~l~pd~--------s~~~----------s~~p-k~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 602 IFMVGRGYLMPDL--------SKIR----------SNCP-KAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred EEEecccccCccc--------hhhh----------ccCH-HHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 1111111111111 0000 1111 11223666899999999999999999998887754
No 26
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-42 Score=339.29 Aligned_cols=250 Identities=25% Similarity=0.396 Sum_probs=204.0
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
...|+..+.||+|.||.||+|.+. +++.||+|++..+.. ...+++++|+.++.+++++||.++|+.+ -.+..+
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy-----l~g~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY-----LKGTKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe-----eecccH
Confidence 346778899999999999999965 588999999976643 4567889999999999999999999984 456678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
+++||||.||++.+.++.... +++.++.-|+++++.|+.|||.+ +.+|||||+.||++..+|.+|++|||.
T Consensus 87 wiiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgV 157 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGV 157 (467)
T ss_pred HHHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecce
Confidence 999999999999999986552 58888889999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+..+.... .....++||+.|||||++.+..|+.|+||||||++.+||++|.+|+....+ +...-.+....|+
T Consensus 158 a~ql~~~~------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--mrvlflIpk~~PP 229 (467)
T KOG0201|consen 158 AGQLTNTV------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--MRVLFLIPKSAPP 229 (467)
T ss_pred eeeeechh------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--ceEEEeccCCCCC
Confidence 97764432 223567899999999999998999999999999999999999999977654 2222222222333
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.......+.++ +++..||++||+.||+|.+++++
T Consensus 230 ~L~~~~S~~~k----------------------EFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RLDGDFSPPFK----------------------EFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccccCHHHH----------------------HHHHHHhhcCcccCcCHHHHhhh
Confidence 22222222222 25557999999999999998864
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-41 Score=347.60 Aligned_cols=249 Identities=26% Similarity=0.333 Sum_probs=203.6
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
.+-|+..+.||+|+.|.|-+|++. +|+.+|||++.+. .......+.+|+-+|+-+.|||+++++++ +++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~ 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQ 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCc
Confidence 467889999999999999999965 5999999999654 23345678899999999999999999999 56778
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
++|+|.||+++|-|++++-..+. +++.++.++++||+.|+.|+|.. +|+|||+||+|+++|..+.+||+||
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeecc
Confidence 89999999999999999987654 99999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCC-CCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|+|..-.+ .....+.+|++.|+|||++.|.+| +.++||||.|||+|.|+||+.||++..-.. -+.+...+.
T Consensus 157 GMAsLe~~-------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~-LLlKV~~G~ 228 (786)
T KOG0588|consen 157 GMASLEVP-------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV-LLLKVQRGV 228 (786)
T ss_pred ceeecccC-------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH-HHHHHHcCc
Confidence 99975322 233456789999999999999998 789999999999999999999997532110 011111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
|. ++.. +....++|+.+|+..||++|.|++||+++-
T Consensus 229 f~--MPs~----------------------Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 229 FE--MPSN----------------------ISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred cc--CCCc----------------------CCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 11 1122 222233477789999999999999999875
No 28
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.9e-41 Score=318.83 Aligned_cols=202 Identities=28% Similarity=0.375 Sum_probs=173.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|+.++.|++|.||.||+|+++ +++.||+|+++.+.. +-.-.-++|+.+|.+++|||||.+-.+.... +.+.+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~i 152 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDKI 152 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---cccee
Confidence 46778899999999999999976 589999999965532 3344568999999999999999999987643 34458
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
|+|||||+. +|..+++.-+ .++...++..+..|+++|++|||.+ .|+||||||+|+|++..|.+||+|||+
T Consensus 153 y~VMe~~Eh-DLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred eeeHHHHHh-hHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 999999988 9999998765 3499999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|+.++... ...+..+-|.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|...
T Consensus 224 AR~ygsp~------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 224 AREYGSPL------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred hhhhcCCc------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 99886542 223456679999999998775 5899999999999999999999888654
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.6e-40 Score=350.59 Aligned_cols=267 Identities=25% Similarity=0.388 Sum_probs=200.6
Q ss_pred HhcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCC
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLD 524 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 524 (767)
..++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++.+ +||||++++++|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK-- 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC--
Confidence 3468999999999999999999742 25689999986432 23346788999999999 89999999998743
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCC--------------------------------------------------
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNE-------------------------------------------------- 554 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 554 (767)
....+++||||+++|+|.+++...+...
T Consensus 83 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 83 --PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred --CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 3345799999999999999997532100
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCcccccc
Q 004218 555 ------HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISST 628 (767)
Q Consensus 555 ------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 628 (767)
...++++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~----~~~ 233 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRK 233 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcch----hcc
Confidence 013488899999999999999999998 9999999999999999999999999999765322111 111
Q ss_pred ccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhc
Q 004218 629 HVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMS 707 (767)
Q Consensus 629 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 707 (767)
....++..|+|||++.+..++.++|||||||++|||++ |..||....... ..............+...+
T Consensus 234 ~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~--------- 303 (338)
T cd05102 234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKDGTRMRAPENAT--------- 303 (338)
T ss_pred cCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhcCCCCCCCCCCC---------
Confidence 22345678999999999899999999999999999997 999986532211 1111111100000011111
Q ss_pred chhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 708 SESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 708 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 304 -------------~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 -------------PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred -------------HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 112237778999999999999999999998764
No 30
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=326.70 Aligned_cols=284 Identities=24% Similarity=0.270 Sum_probs=212.2
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEee--ccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLD--IESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
......|...+.||+|+||.|+.|.++ +|+.||||.+. .......++..+|++.++.++|+||+.+.+.+.......
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 344566777899999999999999965 59999999986 445556788999999999999999999999987645556
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
-..+|+|+|+|+. +|.+.++.... ++...+..+++|+++||.|+|+. +|+|||+||.|++++.+..+||+
T Consensus 98 f~DvYiV~elMet-DL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~ 167 (359)
T KOG0660|consen 98 FNDVYLVFELMET-DLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKIC 167 (359)
T ss_pred cceeEEehhHHhh-HHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEec
Confidence 6789999999954 99999987553 99999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccC-CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCC-cchhhHh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-VSLVKWV 685 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~ 685 (767)
|||+|+..... ......+....|.+|+|||++. ...|+.+.||||.|||+.||++|++-|.+...-. ..+....
T Consensus 168 DFGLAR~~~~~----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~ 243 (359)
T KOG0660|consen 168 DFGLARYLDKF----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILEL 243 (359)
T ss_pred cccceeecccc----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHh
Confidence 99999987543 1223335567899999999765 4678999999999999999999999886532211 1111111
Q ss_pred hhhccc-chhhhccHHHHHhhhcch----hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 686 ESNFPK-NAQQVLDRELRQLMMSSE----SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 686 ~~~~~~-~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
-+..+. ....+..+..+..+...+ ....+.........-+++.+||..||.+|+|++|++++-
T Consensus 244 lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 244 LGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred cCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 111111 122222233333322221 111122222222223377799999999999999999874
No 31
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=328.78 Aligned_cols=283 Identities=25% Similarity=0.296 Sum_probs=201.3
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhc--CCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRN--TRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
....+..+.+|+|+||.||+|++. ++.||||+++. ...+.|++|-+|.+. ++|+||++++++-...... ...+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 456667789999999999999987 68999999963 345677788777765 5899999999984332222 4478
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC------CCCeEeecCCCCCeeeCCCCceE
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC------EVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
++|+||.+.|+|.+|+...- ++|.+..+|+..+++||+|||+.. .++|+|||||++||||.+|+.+.
T Consensus 284 wLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred eEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 99999999999999998765 999999999999999999999853 46899999999999999999999
Q ss_pred EccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCC------CCcccchhhhHHHHHHHhCCCCCCCcccCCc
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP------STAGDVYSFGVMLLEIFTGMSPTHESFAGEV 679 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~Dv~slG~il~el~tg~~p~~~~~~~~~ 679 (767)
|+|||+|..+....... .....+||.+|||||++.+..- -.+.||||+|.|+|||+++..-++.....+.
T Consensus 357 IaDFGLAl~~~p~~~~~----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 357 IADFGLALRLEPGKPQG----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred eeccceeEEecCCCCCc----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 99999999887543332 3345789999999999876432 2368999999999999997755432111111
Q ss_pred chhhHhhhhcccchhhh----ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 680 SLVKWVESNFPKNAQQV----LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 680 ~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
++.-..+-...+...+. +.+..+..+.. ...... -.+.+.+.+..||+.||+.|.||.=|-+++.++....
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~-~W~~h~----~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD-AWRKHA----GMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChh-hhhcCc----cHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 11111000011101110 00000000000 000011 1223333666899999999999999999998887655
Q ss_pred hh
Q 004218 756 LK 757 (767)
Q Consensus 756 ~~ 757 (767)
..
T Consensus 508 ~~ 509 (534)
T KOG3653|consen 508 ED 509 (534)
T ss_pred Cc
Confidence 43
No 32
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-41 Score=340.72 Aligned_cols=252 Identities=27% Similarity=0.440 Sum_probs=200.3
Q ss_pred ccCHHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecC
Q 004218 444 MISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSL 523 (767)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 523 (767)
.++|+++. ..+-||+|+.|.||+|+.+ ++.||||.++. .-..+|+-|++++||||+.|.|+|..
T Consensus 120 eiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtq- 183 (904)
T KOG4721|consen 120 EIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQ- 183 (904)
T ss_pred cCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecC-
Confidence 34555543 3467999999999999998 78999998752 22357889999999999999999864
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT 603 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~ 603 (767)
...+|||||||+.|-|.++++..+. +...-...|.++||.|+.|||.+ .|||||||.-||||+.+..
T Consensus 184 ----sPcyCIiMEfCa~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~ 250 (904)
T KOG4721|consen 184 ----SPCYCIIMEFCAQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDV 250 (904)
T ss_pred ----CceeEEeeeccccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccce
Confidence 3456999999999999999987554 88888999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
+||+|||.++...+. .....++||..|||||++...+.++|+||||||||+|||+||..||.+...... -
T Consensus 251 VKIsDFGTS~e~~~~-------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---I 320 (904)
T KOG4721|consen 251 VKISDFGTSKELSDK-------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---I 320 (904)
T ss_pred EEeccccchHhhhhh-------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---E
Confidence 999999999876543 223457899999999999999999999999999999999999999966322211 1
Q ss_pred Hhhh--hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHHh
Q 004218 684 WVES--NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKILL 756 (767)
Q Consensus 684 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 756 (767)
|--+ .....++..+.+.++ - |+..||+-.|..||++.+++.+|+-+...+.
T Consensus 321 wGVGsNsL~LpvPstcP~Gfk------------------l----L~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 321 WGVGSNSLHLPVPSTCPDGFK------------------L----LLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred EeccCCcccccCcccCchHHH------------------H----HHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 1100 111112222222221 1 5668999999999999999999976655443
No 33
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=330.05 Aligned_cols=262 Identities=25% Similarity=0.345 Sum_probs=198.3
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---------Cc-----chhhHHHHHHHHhcCCCCCcee
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---------TG-----TWKSFFAECEALRNTRHRNLVK 515 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---------~~-----~~~~~~~e~~~l~~l~h~niv~ 515 (767)
+...++|++.+.||+|.||.|-+|+.. +++.||||++++.. .. ..+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 455689999999999999999999965 58999999985431 11 1347889999999999999999
Q ss_pred EEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCC
Q 004218 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGN 595 (767)
Q Consensus 516 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~N 595 (767)
++++..+ +..+.+|+|+|||..|.+...=.. ...+++.+++++++++..||+|||.+ |||||||||+|
T Consensus 173 LiEvLDD---P~s~~~YlVley~s~G~v~w~p~d------~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsN 240 (576)
T KOG0585|consen 173 LIEVLDD---PESDKLYLVLEYCSKGEVKWCPPD------KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSN 240 (576)
T ss_pred EEEeecC---cccCceEEEEEeccCCccccCCCC------cccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhh
Confidence 9998653 456789999999988877543211 11289999999999999999999999 99999999999
Q ss_pred eeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC----CCCcccchhhhHHHHHHHhCCCCC
Q 004218 596 ILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK----PSTAGDVYSFGVMLLEIFTGMSPT 671 (767)
Q Consensus 596 Il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~tg~~p~ 671 (767)
+|++++|++||+|||.+......... ..........||+.|+|||...++. .+.+.||||+||++|.|+.|+.||
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~-~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDE-GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCcc-ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 99999999999999999866333111 1122223467999999999887633 367899999999999999999999
Q ss_pred CCcccCCcchhhHhhh--hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 672 HESFAGEVSLVKWVES--NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 672 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.+...-+ ...+.+.. .+|.. ..+...+++||.++|.+||++|.+..+|..+.-
T Consensus 320 ~~~~~~~-l~~KIvn~pL~fP~~------------------------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 320 FDDFELE-LFDKIVNDPLEFPEN------------------------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred ccchHHH-HHHHHhcCcccCCCc------------------------ccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 5532110 01111111 01110 012233445777999999999999999987764
Q ss_pred H
Q 004218 750 N 750 (767)
Q Consensus 750 ~ 750 (767)
-
T Consensus 375 v 375 (576)
T KOG0585|consen 375 V 375 (576)
T ss_pred e
Confidence 3
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.1e-40 Score=332.21 Aligned_cols=213 Identities=26% Similarity=0.378 Sum_probs=181.1
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
+...+.|+.++.||+|+||.||+|+-+ +|..+|+|++++. ..+..+.+..|-.+|...++|.||+++.. |.
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQ 211 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQ 211 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ec
Confidence 335678999999999999999999965 4999999999754 34566778899999999999999999988 67
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
+..++|+||||++||++..+|..... +++..+..++.+++.|++.+|+. |||||||||+|+|||..|++||
T Consensus 212 D~~~LYLiMEylPGGD~mTLL~~~~~------L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKL 282 (550)
T KOG0605|consen 212 DKEYLYLIMEYLPGGDMMTLLMRKDT------LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKL 282 (550)
T ss_pred CCCeeEEEEEecCCccHHHHHHhcCc------CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEee
Confidence 88899999999999999999987654 99999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcC-----------------CCcccc------------------------ccccccCCCCccCccccCC
Q 004218 607 GDFGLARSLLERIG-----------------NQSSIS------------------------STHVLKGSIGYIPPEYGLG 645 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~-----------------~~~~~~------------------------~~~~~~gt~~y~aPE~~~~ 645 (767)
+|||++.-+..... ...... .....+|||-|+|||++.+
T Consensus 283 SDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~ 362 (550)
T KOG0605|consen 283 SDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG 362 (550)
T ss_pred ccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc
Confidence 99999964432100 000000 0012569999999999999
Q ss_pred CCCCCcccchhhhHHHHHHHhCCCCCCCcccC
Q 004218 646 EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677 (767)
Q Consensus 646 ~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 677 (767)
..|+..+|+||+|||+|||+.|-+||....+.
T Consensus 363 kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~ 394 (550)
T KOG0605|consen 363 KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ 394 (550)
T ss_pred CCCCccccHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999999999999999999999775443
No 35
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.1e-41 Score=325.25 Aligned_cols=264 Identities=27% Similarity=0.341 Sum_probs=194.2
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.|...+++|.|+||.||+|...+ ++.||||..-.+.. --.+|+++|+.++|||||++..++......+.-+..+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 56677899999999999999654 78999998753322 22379999999999999999998876554444577899
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-CceEEccccchh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-MTAKVGDFGLAR 613 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~~kl~Dfg~a~ 613 (767)
||||+. +|.++++.... .+..++..++.-+.+||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|+
T Consensus 101 leymP~-tL~~~~r~~~~--~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTR--ANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHhchH-HHHHHHHHHhh--cCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999987 99999985321 133488889999999999999999998 99999999999999965 999999999999
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
.+...... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+... ..++...++---.+.
T Consensus 175 ~L~~~epn-------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt 246 (364)
T KOG0658|consen 175 VLVKGEPN-------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPT 246 (364)
T ss_pred eeccCCCc-------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCC
Confidence 87554322 334578899999988775 589999999999999999999999876322 222332222111000
Q ss_pred ---h------------hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 ---A------------QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ---~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+ +++....+.+.+ ....-.+.++ ++.+++.++|.+|.++.|++.+
T Consensus 247 ~e~I~~mn~~y~~~~~p~ik~~~~~~~~---------~~~~~~d~~d-ll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 247 REDIKSMNPNYTEFKFPQIKAHPWHKVF---------FKRLPPDALD-LLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHHHhhcCcccccccCcccccccceeec---------ccCCCHHHHH-HHHHHhccChhhcCCHHHHhcc
Confidence 0 011111111100 0011112222 6778999999999999999864
No 36
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=329.31 Aligned_cols=264 Identities=22% Similarity=0.262 Sum_probs=200.2
Q ss_pred CCccCHHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcc---hhhHHHHHHHHhcCCCCCceeEEe
Q 004218 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGT---WKSFFAECEALRNTRHRNLVKLIT 518 (767)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~ 518 (767)
...++.+++ +......||+|++|.||+|.+. |+.||||.++...... .+.+.+|++++++++||||+++++
T Consensus 12 ~~~i~~~~i-----~~~~~~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDI-----DKYTSVLIKENDQNSIYKGIFN-NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHc-----CCCCCeEEeeCCceEEEEEEEC-CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 344555555 2222357999999999999984 8899999986543332 467789999999999999999999
Q ss_pred eeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 519 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
++.+. .......++||||+++|+|.+++...+ .+++..+..++.|++.|++|||+.. +++||||||+||++
T Consensus 86 ~~~~~-~~~~~~~~lv~Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill 156 (283)
T PHA02988 86 FIIDI-VDDLPRLSLILEYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLV 156 (283)
T ss_pred eEEec-ccCCCceEEEEEeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEE
Confidence 87541 123456799999999999999997643 3899999999999999999999731 78899999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
++++.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 157 ~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~ 227 (283)
T PHA02988 157 TENYKLKIICHGLEKILSSPP---------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT 227 (283)
T ss_pred CCCCcEEEcccchHhhhcccc---------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH
Confidence 999999999999997653211 12347889999999876 6789999999999999999999999975322
Q ss_pred CCcchhhHh-hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 677 GEVSLVKWV-ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 677 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
. .....+ ....+...+...++ .+.+++.+||+.||++|||++|+++.|+..+.
T Consensus 228 ~--~~~~~i~~~~~~~~~~~~~~~----------------------~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 228 K--EIYDLIINKNNSLKLPLDCPL----------------------EIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred H--HHHHHHHhcCCCCCCCCcCcH----------------------HHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 1 111111 11111111101111 12337778999999999999999999988764
No 37
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.2e-40 Score=319.36 Aligned_cols=247 Identities=24% Similarity=0.370 Sum_probs=204.2
Q ss_pred hcCCCCCCccccccceEEEEEEe-CCCcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
..+|++.+.||+|.||.|-+|.. ..|+.||||.++++.- .+.-.+.+|++||..++||||+.++.+ |++.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkd 126 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKD 126 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCc
Confidence 35788889999999999999995 5699999999966533 344567899999999999999999999 67888
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
.+.|||||..+|.|+||+...+. +++.++..+++||..|+.|+|++ ++||||||.+|||+|.++++||+||
T Consensus 127 KIvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADF 197 (668)
T KOG0611|consen 127 KIVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADF 197 (668)
T ss_pred eEEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeecc
Confidence 89999999999999999988765 99999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCC-CCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh-
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES- 687 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~- 687 (767)
|++-.+... ....+++|++-|.+||++.+.+| ++.+|-||+|+++|.++.|..||+... ...++.++..
T Consensus 198 GLSNly~~~-------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--hk~lvrQIs~G 268 (668)
T KOG0611|consen 198 GLSNLYADK-------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--HKRLVRQISRG 268 (668)
T ss_pred chhhhhccc-------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--HHHHHHHhhcc
Confidence 999776432 23456889999999999999988 789999999999999999999997632 2223332221
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
.|.+. ... .+. .-+|++||..+|+.|.|+.++..+.
T Consensus 269 aYrEP-~~P----------------SdA--------~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 269 AYREP-ETP----------------SDA--------SGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred cccCC-CCC----------------chH--------HHHHHHHHhcCcccchhHHHHhhhh
Confidence 22111 000 000 0177789999999999999998765
No 38
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-40 Score=352.33 Aligned_cols=271 Identities=22% Similarity=0.275 Sum_probs=208.4
Q ss_pred HhcCCCCCCccccccceEEEEEEeCCC-cEEEEEEeeccCCcchhhHHHHHHHHhcCC-CCCceeEEeeeecCC-ccc-c
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLREG-ISVAVKVLDIESTGTWKSFFAECEALRNTR-HRNLVKLITSCSSLD-FKN-M 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~-~~~-~ 528 (767)
...++++.+.|.+|||+.||.|.+..+ ..||+|++-..+....+.+.+|+++|+.+. |+|||.+++...... -.. .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 445788899999999999999998765 999999987667777888999999999996 999999999432222 222 3
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
-.+++.||||+||.|-|++..+.. ..+++.++++|++|+++|+++||.. .++|||||||-+|||++.+|..||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq----~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQ----TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHh----ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 578899999999999999986542 3399999999999999999999997 67899999999999999999999999
Q ss_pred ccchhhhhhhcCCCcc---ccccccccCCCCccCcccc---CCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchh
Q 004218 609 FGLARSLLERIGNQSS---ISSTHVLKGSIGYIPPEYG---LGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 682 (767)
||.|............ ....-....|+.|+|||++ .+.++++|+|||||||++|.|+....||+..-.-...-
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIln- 268 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILN- 268 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEe-
Confidence 9999743322211000 0001123468999999975 57789999999999999999999999997642211111
Q ss_pred hHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 683 KWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
....+|.. . .+.+ .+++||+.||+.||.+||++-|++.++..+.+..
T Consensus 269 --g~Y~~P~~--p------------------~ys~----~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 269 --GNYSFPPF--P------------------NYSD----RLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred --ccccCCCC--c------------------cHHH----HHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 11112221 1 1112 2233777899999999999999999998887543
No 39
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=341.32 Aligned_cols=372 Identities=24% Similarity=0.257 Sum_probs=323.5
Q ss_pred ccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeec
Q 004218 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIG 83 (767)
Q Consensus 4 L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (767)
-+.||+|+|++. .+....|..+++|+++++..|.++ .+|...+...+|+.|+|.+|.|+..-.+.++.++.|+.||||
T Consensus 80 t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 80 TQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred eeeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 357999999998 888888888999999999999999 899877777889999999999997777889999999999999
Q ss_pred CccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcC
Q 004218 84 FNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSY 163 (767)
Q Consensus 84 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 163 (767)
.|.|...+.. ++..-.++++|+|++|.|+..--..|..+.. |..|.|++|+++...+..|.++++|+.|+|..
T Consensus 158 rN~is~i~~~------sfp~~~ni~~L~La~N~It~l~~~~F~~lns-L~tlkLsrNrittLp~r~Fk~L~~L~~LdLnr 230 (873)
T KOG4194|consen 158 RNLISEIPKP------SFPAKVNIKKLNLASNRITTLETGHFDSLNS-LLTLKLSRNRITTLPQRSFKRLPKLESLDLNR 230 (873)
T ss_pred hchhhcccCC------CCCCCCCceEEeeccccccccccccccccch-heeeecccCcccccCHHHhhhcchhhhhhccc
Confidence 9999876443 3455567999999999999777778888875 99999999999988888888999999999999
Q ss_pred CcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCC
Q 004218 164 NSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIP 243 (767)
Q Consensus 164 n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 243 (767)
|+|.-...-.|.+|++|+.|.|..|.|+..-.++|..+.++++|+|+.|++.....+++-+++.|+.|+||+|.|....+
T Consensus 231 N~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~ 310 (873)
T KOG4194|consen 231 NRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHI 310 (873)
T ss_pred cceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeec
Confidence 99995556789999999999999999998888899999999999999999998888899999999999999999998889
Q ss_pred hhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCC---Cchhh
Q 004218 244 KEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPI---PNILA 320 (767)
Q Consensus 244 ~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~~~ 320 (767)
+.+.-.++| +.|+|++|+|+...+..|..|..|+.|.|++|.+..+....|..+.+|++|||++|.|+..+ ...|.
T Consensus 311 d~WsftqkL-~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 311 DSWSFTQKL-KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred chhhhcccc-eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 999888888 45599999999999999999999999999999998888888999999999999999987644 34688
Q ss_pred ccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCCccccccccccccCCcCccc
Q 004218 321 ELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGNPKLCL 385 (767)
Q Consensus 321 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~Np~~c~ 385 (767)
++++|+.|+|.+|+|..+.-.+|..++.|+.|||.+|.+..+-+....-..+..+.+..-...|.
T Consensus 390 gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 390 GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCD 454 (873)
T ss_pred cchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEe
Confidence 89999999999999996666789999999999999999998877664434666777777666774
No 40
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.9e-40 Score=297.68 Aligned_cols=250 Identities=23% Similarity=0.337 Sum_probs=203.4
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
+.+.|++.+.||+|-||.||.|+.+ ++-.||+|++.++ .....+++.+|++|-..++||||++++++ |.+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eecc
Confidence 3467899999999999999999965 4788999998543 33456788999999999999999999999 6677
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+|+++||.++|++...++..+ ...+++...+.+++|+|.|+.|+|.. +|+||||||+|+|++..+..||+|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~----~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR----MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc----cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccC
Confidence 88899999999999999998554 34488888999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
||.+.... .......+||..|.|||...+..++..+|+|++|+..||++.|.+||..... ...+.+..+..
T Consensus 168 fGwsV~~p--------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-~etYkrI~k~~ 238 (281)
T KOG0580|consen 168 FGWSVHAP--------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-SETYKRIRKVD 238 (281)
T ss_pred CCceeecC--------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh-HHHHHHHHHcc
Confidence 99996532 2234567899999999999999999999999999999999999999976441 11111111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+. .+.. +..-.+++|.+|+..+|.+|.+..|++++
T Consensus 239 ~~--~p~~----------------------is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 239 LK--FPST----------------------ISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cc--CCcc----------------------cChhHHHHHHHHhccCccccccHHHHhhh
Confidence 10 0011 11222347778999999999999999876
No 41
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-41 Score=306.67 Aligned_cols=251 Identities=27% Similarity=0.412 Sum_probs=198.0
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
.+++|++.+.||+|+|+.||++... +|+.+|+|++... ...+.+.+.+|++|-+.++||||+++.+.+ ....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-----~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-----QEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh-----cccc
Confidence 4567889999999999999999855 5999999988432 344678899999999999999999999984 4556
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEE
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE---DMTAKV 606 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl 606 (767)
+.|+|+|+|+|++|..-+-... .+++..+-..++||++||.|+|.+ +|||||+||+|+++.+ ..-+||
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred eeEEEEecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceee
Confidence 6799999999999985443322 288889999999999999999999 9999999999999953 346999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHh-
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWV- 685 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~- 685 (767)
+|||+|..+... ......+||++|||||++...+|+..+|||+-|+++|-++.|.+||.+.... .+.+.+
T Consensus 155 ~~FGvAi~l~~g-------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--rlye~I~ 225 (355)
T KOG0033|consen 155 ADFGLAIEVNDG-------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYEQIK 225 (355)
T ss_pred cccceEEEeCCc-------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--HHHHHHh
Confidence 999999876521 2234567999999999999999999999999999999999999999653221 121111
Q ss_pred hh--hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 686 ES--NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 686 ~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
.+ .++...++.+.+. .++++++||..||++|.|+.|++++=
T Consensus 226 ~g~yd~~~~~w~~is~~----------------------Ak~LvrrML~~dP~kRIta~EAL~Hp 268 (355)
T KOG0033|consen 226 AGAYDYPSPEWDTVTPE----------------------AKSLIRRMLTVNPKKRITADEALKHP 268 (355)
T ss_pred ccccCCCCcccCcCCHH----------------------HHHHHHHHhccChhhhccHHHHhCCc
Confidence 11 2222222223322 22366789999999999999998753
No 42
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.5e-39 Score=333.02 Aligned_cols=276 Identities=25% Similarity=0.328 Sum_probs=197.9
Q ss_pred cCCCCCCccccccceEEEEEEeC--CCcEEEEEEeeccC--CcchhhHHHHHHHHhcC---CCCCceeEEeeeecCCccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR--EGISVAVKVLDIES--TGTWKSFFAECEALRNT---RHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~ 527 (767)
.+|++.+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 37899999999999999999863 36889999986442 22334566787777765 6999999999986544445
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
...+++||||++ ++|.+++.... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 667899999996 59999987543 23489999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
|||.++..... .......||..|+|||++.+..++.++||||+||++|||++|++||......+ .+......
T Consensus 153 Dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~ 224 (290)
T cd07862 153 DFGLARIYSFQ-------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDV 224 (290)
T ss_pred cccceEeccCC-------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHH
Confidence 99999754322 11234568999999999988889999999999999999999999997543211 11111111
Q ss_pred h---cccchhhhccHHHHHhhh-cchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 N---FPKNAQQVLDRELRQLMM-SSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~---~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. .+........- ....+. ............+...+.+++.+||+.||++|||+.|++++
T Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 225 IGLPGEEDWPRDVAL-PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hCCCChhhchhhhcc-cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0 00000000000 000000 00000111111223344458889999999999999999863
No 43
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4e-40 Score=345.34 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=211.1
Q ss_pred CCCCCCccccccceEEEEEEeCC----CcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
..++.++||.|.||.|++|+++- ...||||.++.. ..+...+|+.|+.||.++.||||+++.|+. .....
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV-----Tks~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV-----TKSKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE-----ecCce
Confidence 34567899999999999999763 457999999765 345677899999999999999999999994 45566
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+.||+|||++|+|+.|++....+ +++.+...++++||.|++||-+. ++|||||.++|||++.+..+|++|||
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEecccc
Confidence 79999999999999999876532 99999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
+++.+.++..... .+..-.=..+|.|||.+..++++.++||||||++|||.++ |..||-+.. .....+.++..+
T Consensus 777 LSRvledd~~~~y---tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--NQdVIkaIe~gy 851 (996)
T KOG0196|consen 777 LSRVLEDDPEAAY---TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVIKAIEQGY 851 (996)
T ss_pred ceeecccCCCccc---cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc--hHHHHHHHHhcc
Confidence 9998765542111 1111112478999999999999999999999999999887 889985543 234455566666
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
....+-.+...+.+ |++.||++|-.+||.+.|++..|.++-+
T Consensus 852 RLPpPmDCP~aL~q----------------------LMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 852 RLPPPMDCPAALYQ----------------------LMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred CCCCCCCCcHHHHH----------------------HHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 65555555555544 5567999999999999999999988654
No 44
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-39 Score=316.07 Aligned_cols=280 Identities=24% Similarity=0.326 Sum_probs=210.3
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhc--CCCCCceeEEeeeecCC
Q 004218 447 YDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRN--TRHRNLVKLITSCSSLD 524 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~ 524 (767)
+-..+...++....+.||+|.||.||+|.|+ |+.||||+|... +.+.+.+|.++.+. ++|+||+.+++.-...
T Consensus 203 lLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~- 277 (513)
T KOG2052|consen 203 LLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKD- 277 (513)
T ss_pred hHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccC-
Confidence 3344556678889999999999999999998 999999999643 33556678888775 4999999999874322
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-----CCCCeEeecCCCCCeeeC
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHND-----CEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIl~~ 599 (767)
......+|+|++|.+.|||+||+.... ++....++++..+|.||+|||.. ..+.|.|||||+.||||.
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK 350 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK 350 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc
Confidence 244568999999999999999998744 99999999999999999999963 467899999999999999
Q ss_pred CCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC----C--CCcccchhhhHHHHHHHhC------
Q 004218 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK----P--STAGDVYSFGVMLLEIFTG------ 667 (767)
Q Consensus 600 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~~Dv~slG~il~el~tg------ 667 (767)
+++.+.|+|+|+|......... -.-.....+||.+|||||++...- + -..+||||||.|+||++..
T Consensus 351 kn~~C~IADLGLAv~h~~~t~~--idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi 428 (513)
T KOG2052|consen 351 KNGTCCIADLGLAVRHDSDTDT--IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGI 428 (513)
T ss_pred cCCcEEEeeceeeEEecccCCc--ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCE
Confidence 9999999999999876554322 222335567999999999986532 1 2368999999999999863
Q ss_pred ----CCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHH
Q 004218 668 ----MSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743 (767)
Q Consensus 668 ----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~e 743 (767)
+.||.+..+.+.++.+..+......... ..+.+-+..+++..+.+ ++..||..+|+.|.||--
T Consensus 429 ~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP------------~ipnrW~s~~~l~~m~k-lMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 429 VEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRP------------NIPNRWKSDPALRVMAK-LMKECWYANPAARLTALR 495 (513)
T ss_pred ehhhcCCcccCCCCCCCHHHHhcceeecccCC------------CCCcccccCHHHHHHHH-HHHHhhcCCchhhhHHHH
Confidence 2677665554444333322111111111 11112222344444555 888999999999999999
Q ss_pred HHHHHHHHHH
Q 004218 744 ALRRLKNAQK 753 (767)
Q Consensus 744 vl~~L~~~~~ 753 (767)
+-+.|.++.+
T Consensus 496 iKKtl~~l~~ 505 (513)
T KOG2052|consen 496 IKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHhc
Confidence 9999988875
No 45
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=334.62 Aligned_cols=203 Identities=29% Similarity=0.418 Sum_probs=178.9
Q ss_pred HHhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 526 (767)
....+|...++||+|.||.|+++..+. ++.+|||++++. ..++.+..+.|.+|+... +||.++.++.. +.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQ 439 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQ 439 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----cc
Confidence 345689999999999999999999764 889999999765 456677888999998887 59999999998 67
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
..+++|+||||+.||++..+.+... +++..+..++..++.||.|||++ |||+||||.+|||+|.+|.+||
T Consensus 440 T~~~l~fvmey~~Ggdm~~~~~~~~-------F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~ki 509 (694)
T KOG0694|consen 440 TKEHLFFVMEYVAGGDLMHHIHTDV-------FSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKI 509 (694)
T ss_pred cCCeEEEEEEecCCCcEEEEEeccc-------ccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEe
Confidence 7889999999999999665554433 99999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
+|||+++... .....+.+++||+.|+|||++.+..|+.++|+|||||++|||+.|+.||....
T Consensus 510 ADFGlcKe~m------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 510 ADFGLCKEGM------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred cccccccccC------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999998532 22345678999999999999999999999999999999999999999997643
No 46
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-38 Score=340.10 Aligned_cols=263 Identities=22% Similarity=0.370 Sum_probs=197.9
Q ss_pred hcCCCCCCccccccceEEEEEEe------CCCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYL------REGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDF 525 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 525 (767)
.++|++.+.||+|+||.||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~---- 109 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT---- 109 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec----
Confidence 45789999999999999999974 235689999986432 23446788999999999 8999999999964
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCC----------------------------------------------------
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKN---------------------------------------------------- 553 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 553 (767)
.....++||||+++|+|.++++.....
T Consensus 110 -~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 110 -VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred -cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 345569999999999999999753210
Q ss_pred -----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 554 -----------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 554 -----------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
.....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0123578999999999999999999998 99999999999999999999999999997653
Q ss_pred hhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
..... .......++..|+|||++.+..++.++|||||||++|||++ |..||...... ....+.+........+.
T Consensus 266 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 340 (375)
T cd05104 266 NDSNY----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYRMLSPE 340 (375)
T ss_pred Ccccc----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCccCCCCC
Confidence 32111 11122335678999999999999999999999999999998 88888653221 11122222111111011
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
..+ ..+.+++.+||+.||++|||+.|+++.|++.
T Consensus 341 ~~~----------------------~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 341 CAP----------------------SEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCC----------------------HHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111 1122377789999999999999999999863
No 47
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.3e-38 Score=340.16 Aligned_cols=265 Identities=23% Similarity=0.395 Sum_probs=199.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCC
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLD 524 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 524 (767)
..++|++.+.||+|+||.||+|.+. ++..||+|.+.... ......+.+|+++++.+ +||||++++++|.
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~--- 112 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT--- 112 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec---
Confidence 3457999999999999999999852 24579999986442 23345688999999999 8999999999864
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCC---------------------------------------------------
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKN--------------------------------------------------- 553 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 553 (767)
....+++||||+++|+|.+++......
T Consensus 113 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 113 --HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred --CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 345679999999999999998643210
Q ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcC
Q 004218 554 -------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620 (767)
Q Consensus 554 -------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 620 (767)
....++++.++.+++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~ 267 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN 267 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence 1123588999999999999999999998 999999999999999999999999999976533211
Q ss_pred CCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhccH
Q 004218 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVLDR 699 (767)
Q Consensus 621 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (767)
........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ..........+...+...++
T Consensus 268 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 342 (374)
T cd05106 268 ----YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQMSRPDFAPP 342 (374)
T ss_pred ----eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCccCCCCCCH
Confidence 011122335678999999998899999999999999999997 999986543221 11111111111111111111
Q ss_pred HHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 700 ELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 700 ~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 343 ----------------------~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 343 ----------------------EIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred ----------------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 1223677899999999999999999998763
No 48
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.6e-39 Score=311.93 Aligned_cols=210 Identities=28% Similarity=0.414 Sum_probs=174.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCC-ceeEEeeeecCC-cccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRN-LVKLITSCSSLD-FKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~-~~~~~ 529 (767)
..|...++||+|+||+||+|+.+ +|+.||+|.+..+.. +......+|+.+++.++|+| |+.+++++.... +....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 45666788999999999999954 589999999976533 35567789999999999999 999999976533 23345
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
.+++|+||++. +|.+++....... ..++...+..+++||+.||+|||++ +|+||||||+||+|+++|.+||+||
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 78999999976 9999998766421 3477789999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
|+|+...-.. ......++|.+|+|||++.+. .|+...||||+||+++||+++++-|.....
T Consensus 165 GlAra~~ip~------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se 226 (323)
T KOG0594|consen 165 GLARAFSIPM------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE 226 (323)
T ss_pred chHHHhcCCc------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence 9998653221 113445689999999998887 689999999999999999999988866433
No 49
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-39 Score=327.69 Aligned_cols=252 Identities=27% Similarity=0.351 Sum_probs=203.2
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|..++.+|+|+||.++.++.+ ++..||+|.+.... ....+...+|+.++++++|||||.+.+.+. .++..+
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~~l 79 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQLL 79 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCceE
Confidence 57889999999999999999966 47899999986543 333457889999999999999999999853 344559
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
+|||+||+||++.+.+.+.+ +.-++++.+..|+.|++.|+.|||+. .|+|||||+.||+++.++.+||+|||+
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred EEEEeecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhh
Confidence 99999999999999998766 34599999999999999999999988 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
|+.+.+.. .......||+.|+.||++.+.+|+.|+||||+||++|||++-+++|........ ..+..... -.
T Consensus 153 aK~l~~~~------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-i~ki~~~~-~~ 224 (426)
T KOG0589|consen 153 AKILNPED------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-ILKINRGL-YS 224 (426)
T ss_pred hhhcCCch------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH-HHHHhhcc-CC
Confidence 99876543 123457899999999999999999999999999999999999999965322111 11111111 11
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..+...... ++.++..|++.+|..||++.+++.+
T Consensus 225 Plp~~ys~e----------------------l~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 PLPSMYSSE----------------------LRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCccccHH----------------------HHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111112222 2236668999999999999999988
No 50
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=353.90 Aligned_cols=267 Identities=29% Similarity=0.440 Sum_probs=209.0
Q ss_pred cCCCCCCccccccceEEEEEEeCC--Cc----EEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE--GI----SVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~--~~----~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
.+.+..+.||+|.||.||.|...+ |. .||||.+... +.....+|.+|+.+|+.++|||||+++|+|.+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~----- 766 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD----- 766 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----
Confidence 455567789999999999999654 43 4899988544 44567889999999999999999999999865
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNE-HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
....+|++|||++|+|..|++..+... ....++..+.+.++.|||+|+.||+++ ++|||||.++|+|++....+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 334599999999999999999875432 245599999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHh
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~ 685 (767)
+|||+|+.+.+......... ..-...|||||.+..+.++.|+|||||||++||++| |..||......+. +..+.
T Consensus 844 aDFGlArDiy~~~yyr~~~~----a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~~~~~ 918 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHGE----AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-LLDVL 918 (1025)
T ss_pred cccchhHhhhhchheeccCc----cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-HHHHH
Confidence 99999996554433222111 112467999999999999999999999999999999 7788865332211 11122
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHHhh
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKILLK 757 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~~ 757 (767)
.+. +-..+..+...+.+ ++..||+.+|++||++..+++++..+.+....
T Consensus 919 ~gg-RL~~P~~CP~~ly~----------------------lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 919 EGG-RLDPPSYCPEKLYQ----------------------LMLQCWKHDPEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred hCC-ccCCCCCCChHHHH----------------------HHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence 222 22333444443332 66679999999999999999999988776553
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.4e-38 Score=337.87 Aligned_cols=277 Identities=22% Similarity=0.258 Sum_probs=197.5
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||+|... +++.||||.+... .......+.+|+++++.++||||+++++++..........++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999965 5899999998643 223445688999999999999999999987654444445689
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||++ ++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELME-SDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecCC-CCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 9999995 69999886543 389999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
+......... .......||..|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+.....
T Consensus 151 ~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~ 225 (338)
T cd07859 151 RVAFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLG 225 (338)
T ss_pred cccccccCcc---ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhC
Confidence 7543221111 11123468999999999865 67899999999999999999999999653211 11111111000
Q ss_pred cc----hhhhccHHHHHhh----hcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KN----AQQVLDRELRQLM----MSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~----~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. ............+ ...+....+........+.+++.+||+.||++|||++|++++
T Consensus 226 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 226 TPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 0111111111110 000000000000011223347889999999999999999976
No 52
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-38 Score=330.01 Aligned_cols=245 Identities=24% Similarity=0.348 Sum_probs=194.5
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++ .++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 36889999999999999999976 58999999986432 23345688999999999999999999874 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 899999999999999997643 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
+++..... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+.....
T Consensus 147 ~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~ 215 (291)
T cd05612 147 FAKKLRDR---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--GIYEKILAGKL 215 (291)
T ss_pred cchhccCC---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCc
Confidence 99765321 12345899999999999988999999999999999999999998653211 11111100000
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC-----HHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID-----IREALRR 747 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 747 (767)
..+... ...+++++.+||+.||.+||+ ++|++++
T Consensus 216 -~~~~~~----------------------~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 -EFPRHL----------------------DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -CCCccC----------------------CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 000001 112233777899999999995 8888876
No 53
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-39 Score=334.03 Aligned_cols=259 Identities=29% Similarity=0.428 Sum_probs=202.3
Q ss_pred cCCCCCCccccccceEEEEEEeCC--C---cEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE--G---ISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
.+....++||+|+||.||+|..+. + ..||||....+ .....+++++|+++|++++|||||+++|++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 344555899999999999999653 2 23899988742 34567889999999999999999999999653
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
...+++|||+|.||+|.++++.... .++..+...++.+.|.||+|||++ +++||||.++|+|++.++.+||
T Consensus 233 -~~Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKI 303 (474)
T KOG0194|consen 233 -EEPLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKI 303 (474)
T ss_pred -CCccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEe
Confidence 4456999999999999999988653 399999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHh
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~ 685 (767)
+|||+++.-... .. ......-...|+|||.+....+++++|||||||++||+++ |..||...... ....++
T Consensus 304 SDFGLs~~~~~~-----~~-~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI 375 (474)
T KOG0194|consen 304 SDFGLSRAGSQY-----VM-KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKI 375 (474)
T ss_pred CccccccCCcce-----ee-ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHH
Confidence 999998753210 00 0011124578999999999999999999999999999999 78898654322 222333
Q ss_pred -hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHHh
Q 004218 686 -ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKILL 756 (767)
Q Consensus 686 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 756 (767)
...++...+...... +..++.+||..||++||||.++.+.++.+.....
T Consensus 376 ~~~~~r~~~~~~~p~~----------------------~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 376 VKNGYRMPIPSKTPKE----------------------LAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred HhcCccCCCCCCCHHH----------------------HHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 323333322222211 1225558999999999999999999998876654
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.9e-38 Score=333.25 Aligned_cols=242 Identities=27% Similarity=0.337 Sum_probs=188.7
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++ ......++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999965 58999999986532 23445678899999999999999999985 45567899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 999999999987543 389999999999999999999999 99999999999999999999999999987432
Q ss_pred hhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQV 696 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (767)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+..... ..+..
T Consensus 147 ~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~-~~p~~ 217 (323)
T cd05571 147 SD------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-RFPRT 217 (323)
T ss_pred cC------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHHcCCC-CCCCC
Confidence 11 11123456899999999999999999999999999999999999999653211 11111100000 00011
Q ss_pred ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 697 LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
+ .+ .+.+++.+||+.||++|| ++.|++++
T Consensus 218 ~------------------~~----~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 218 L------------------SP----EAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred C------------------CH----HHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 1 11 122366689999999999 79998764
No 55
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.8e-38 Score=326.27 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=192.7
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|++|+++++++. .++..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-----cCCeE
Confidence 3778899999999999999964 68999999986432 223346789999999999999999999853 45578
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMG----NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 99999999999998886432 23489999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... ......||..|+|||++.+..++.++||||+||++|||++|+.||........ ...+......
T Consensus 149 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~ 219 (285)
T cd05631 149 AVQIPEGE-------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK--REEVDRRVKE 219 (285)
T ss_pred cEEcCCCC-------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh--HHHHHHHhhc
Confidence 97542211 11234589999999999999999999999999999999999999975322111 0000000000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC-----HHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID-----IREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 747 (767)
... .....+...+.+++.+||+.||++||+ ++|++++
T Consensus 220 ~~~-------------------~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 220 DQE-------------------EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ccc-------------------cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 000 000001112233777999999999997 8888875
No 56
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-39 Score=298.17 Aligned_cols=258 Identities=26% Similarity=0.384 Sum_probs=199.5
Q ss_pred HHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCc----c----hhhHHHHHHHHhcC-CCCCceeEEe
Q 004218 449 ELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG----T----WKSFFAECEALRNT-RHRNLVKLIT 518 (767)
Q Consensus 449 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~----~~~~~~e~~~l~~l-~h~niv~~~~ 518 (767)
+-...-..|...+.+|+|..++|-++..+ +|..+|+|++...... . .+.-.+|+.||+++ .||+|+++.+
T Consensus 11 aa~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D 90 (411)
T KOG0599|consen 11 AAKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD 90 (411)
T ss_pred hHhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee
Confidence 34455678888999999999999998865 5889999998643221 1 23345799999998 7999999999
Q ss_pred eeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 519 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
++ +.+.++++|+|.|+.|.|.|++...- .+++.+..+|++|+++|++|||.+ .|||||+||+||++
T Consensus 91 ~y-----es~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILl 156 (411)
T KOG0599|consen 91 VY-----ESDAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILL 156 (411)
T ss_pred ec-----cCcchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheee
Confidence 94 55667799999999999999998754 399999999999999999999999 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccC------CCCCCCcccchhhhHHHHHHHhCCCCCC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL------GEKPSTAGDVYSFGVMLLEIFTGMSPTH 672 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~il~el~tg~~p~~ 672 (767)
+++.++||+|||+|+.+.+. ......+||++|+|||.+. ...|+...|+||.|+++|.++.|.+||.
T Consensus 157 ddn~~i~isDFGFa~~l~~G-------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFw 229 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLEPG-------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFW 229 (411)
T ss_pred ccccceEEeccceeeccCCc-------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchh
Confidence 99999999999999976442 2345678999999999875 3467889999999999999999999984
Q ss_pred CcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 673 ESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
.... ..-+...+.+.+.- ..++..+ +..-.+++|.+||+.||.+|.|++|++++=
T Consensus 230 HRkQ-mlMLR~ImeGkyqF----------------~speWad----is~~~KdLIsrlLqVdp~~Ritake~LaHp 284 (411)
T KOG0599|consen 230 HRKQ-MLMLRMIMEGKYQF----------------RSPEWAD----ISATVKDLISRLLQVDPTKRITAKEALAHP 284 (411)
T ss_pred HHHH-HHHHHHHHhccccc----------------CCcchhh----ccccHHHHHHHHHeeCchhcccHHHHhcCh
Confidence 3110 00011111111111 1111122 222334477799999999999999999863
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.7e-38 Score=332.30 Aligned_cols=199 Identities=24% Similarity=0.388 Sum_probs=171.9
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.++|++.+.||+|+||.||++++. ++..||+|.+..... ...+.+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 468999999999999999999976 488999999875432 33467899999999999999999999854 44567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 99999999999999997643 3899999999999999999999851 699999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+...... ......||..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 151 ~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLIDS--------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccccccc--------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 8755322 11234589999999999998999999999999999999999999964
No 58
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.1e-38 Score=321.07 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=196.1
Q ss_pred hcCCCCCCccccccceEEEEEEeC----CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.++|++.+.||+|+||.||+|.++ .+..||+|.++.... .....+.+|+.++++++||||+++++++. .+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 357889999999999999999853 367899999865432 33457889999999999999999999864 34
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.++++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 56799999999999999997542 2389999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 687 (767)
||.+........ .......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... ...+.+..
T Consensus 151 fg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~ 223 (266)
T cd05064 151 FRRLQEDKSEAI-----YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVED 223 (266)
T ss_pred Ccccccccccch-----hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHC
Confidence 998764321110 11112235678999999999999999999999999999775 99998653221 11111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
......+..++ ..+.+++.+||+.+|++|||++|+.+.|.++
T Consensus 224 ~~~~~~~~~~~----------------------~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 224 GFRLPAPRNCP----------------------NLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCC----------------------HHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11111111111 1122367789999999999999999988754
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=333.05 Aligned_cols=245 Identities=23% Similarity=0.314 Sum_probs=194.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.++++++||||+++++++. .++.
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-----DENR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----cCCE
Confidence 57889999999999999999976 4889999998643 2234567889999999999999999999853 4567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999997643 388999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
+++..... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+....
T Consensus 164 ~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~~~- 231 (329)
T PTZ00263 164 FAKKVPDR---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--RIYEKILAGR- 231 (329)
T ss_pred CceEcCCC---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--HHHHHHhcCC-
Confidence 99754321 12346899999999999999999999999999999999999999653211 1111111000
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC-----HHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID-----IREALRR 747 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 747 (767)
...+..++. .+++++.+||+.||.+||+ ++|++++
T Consensus 232 ~~~p~~~~~----------------------~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 232 LKFPNWFDG----------------------RARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred cCCCCCCCH----------------------HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 001111111 1223777899999999997 6888765
No 60
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.4e-38 Score=327.69 Aligned_cols=267 Identities=25% Similarity=0.367 Sum_probs=194.2
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-----------------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCcee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-----------------GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVK 515 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~ 515 (767)
.++|++.+.||+|+||.||+|.+++ +..||+|++..... .....+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578999999999999999998532 34699999865432 23457889999999999999999
Q ss_pred EEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCC-------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 004218 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN-------------EHGNGLNFLERLNIAIDIASALDYLHNDC 582 (767)
Q Consensus 516 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 582 (767)
+++++.. ....++||||+++|+|.+++...... .....+++.++..++.|++.||+|||+.
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999643 34579999999999999998653211 1123478899999999999999999999
Q ss_pred CCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHH
Q 004218 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLL 662 (767)
Q Consensus 583 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ 662 (767)
+|+||||||+||+++.++.+||+|||+++....... ........++..|+|||++.+..++.++||||||+++|
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 231 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLW 231 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCce----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHH
Confidence 999999999999999999999999999975432211 11112334578899999998888999999999999999
Q ss_pred HHHh--CCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC
Q 004218 663 EIFT--GMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID 740 (767)
Q Consensus 663 el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt 740 (767)
||++ +..||...... .....+...+.... .......+. . ....+.+++.+||+.||++|||
T Consensus 232 el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~--------~~~~~~~~~------~-~~~~~~~li~~cl~~~p~~RPs 294 (304)
T cd05096 232 EILMLCKEQPYGELTDE--QVIENAGEFFRDQG--------RQVYLFRPP------P-CPQGLYELMLQCWSRDCRERPS 294 (304)
T ss_pred HHHHccCCCCCCcCCHH--HHHHHHHHHhhhcc--------ccccccCCC------C-CCHHHHHHHHHHccCCchhCcC
Confidence 9987 55676543211 11111110000000 000000000 0 0111233777999999999999
Q ss_pred HHHHHHHHH
Q 004218 741 IREALRRLK 749 (767)
Q Consensus 741 ~~evl~~L~ 749 (767)
+.|+.+.|+
T Consensus 295 ~~~i~~~l~ 303 (304)
T cd05096 295 FSDIHAFLT 303 (304)
T ss_pred HHHHHHHHh
Confidence 999998885
No 61
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=332.09 Aligned_cols=246 Identities=24% Similarity=0.354 Sum_probs=195.1
Q ss_pred ccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCC
Q 004218 462 LIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGN 540 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 540 (767)
+||+|.||+||.|++.+ ...+|||.+........+-+..|+...++++|.|||+++|.| ..++++-|.||-++|
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCCC
Confidence 69999999999999765 667999999766666778889999999999999999999994 456688999999999
Q ss_pred CChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEEccccchhhhhhhc
Q 004218 541 GSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD-EDMTAKVGDFGLARSLLERI 619 (767)
Q Consensus 541 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~Dfg~a~~~~~~~ 619 (767)
|+|.++++..-.. -.-.+.++-.+.+||++||.|||++ .|||||||-+||+|+ -.|.+||+|||.++.+..
T Consensus 657 GSLSsLLrskWGP---lKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-- 728 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGP---LKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-- 728 (1226)
T ss_pred CcHHHHHHhccCC---CccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc--
Confidence 9999999875432 1126788889999999999999999 999999999999997 679999999999987632
Q ss_pred CCCccccccccccCCCCccCccccCCC--CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhc
Q 004218 620 GNQSSISSTHVLKGSIGYIPPEYGLGE--KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVL 697 (767)
Q Consensus 620 ~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (767)
-...+.++.||..|||||++..+ .|+.++|||||||++.||.||++||.........+.+.--....++++
T Consensus 729 ----inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iP--- 801 (1226)
T KOG4279|consen 729 ----INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIP--- 801 (1226)
T ss_pred ----CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCc---
Confidence 23345677899999999999765 489999999999999999999999976433322111110001111111
Q ss_pred cHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 698 DRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
+.+..-.+.+|.+|+.+||.+||+|+++++
T Consensus 802 -------------------eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 -------------------EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred -------------------HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 112222333777899999999999999985
No 62
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=4.9e-38 Score=325.38 Aligned_cols=274 Identities=22% Similarity=0.281 Sum_probs=196.5
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|+||.||+|+++ +++.||+|++.... ....+.+.+|+++++.++||||+++++++ ..++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 47899999999999999999976 48899999986432 23356788999999999999999999985 345678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 9999999987776554322 2389999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcc-hhhHhhhhcc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVS-LVKWVESNFP 690 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~ 690 (767)
+........ .......|+..|+|||++.+..++.++||||+||++|||++|+.||......... .........+
T Consensus 147 ~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (287)
T cd07848 147 ARNLSEGSN-----ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLP 221 (287)
T ss_pred ccccccccc-----ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCC
Confidence 976532211 1112345899999999999888999999999999999999999999653221110 0000000111
Q ss_pred cchhhhc--cHHHHHhh----hcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KNAQQVL--DRELRQLM----MSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~~~~~~--~~~l~~~~----~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
....... +....... .............+...+.+++.+||+.||++|||++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 222 AEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 00000000 000000011111233345558889999999999999999864
No 63
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.9e-38 Score=333.86 Aligned_cols=252 Identities=23% Similarity=0.309 Sum_probs=195.9
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|.+.. ++.||+|++.... ....+.+.+|+++++.++||||+++++++ ..+..
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 468999999999999999999764 8899999986442 23456688999999999999999999985 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 899999999999999997543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc-
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF- 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~- 689 (767)
++..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+....
T Consensus 147 ~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~i~~~~~ 215 (333)
T cd05600 147 LSKGIVT---------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET--WENLKYWKE 215 (333)
T ss_pred CCccccc---------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH--HHHHHhccc
Confidence 9975432 12345689999999999999999999999999999999999999965322111 00000000
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
....+...+ ......+.+. +++.+||..+|.+||+++|++++
T Consensus 216 ~~~~~~~~~------------~~~~~s~~~~----~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 216 TLQRPVYDD------------PRFNLSDEAW----DLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred cccCCCCCc------------cccccCHHHH----HHHHHHhhChhhhcCCHHHHHhC
Confidence 000000000 0001112222 26668999999999999999976
No 64
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.6e-38 Score=325.94 Aligned_cols=200 Identities=29% Similarity=0.429 Sum_probs=167.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|+||.||+|..+ +++.||+|+++... ......+.+|++++++++||||+++++++. .....+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-----TERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-----CCCeEE
Confidence 57999999999999999999965 58899999986443 233456789999999999999999999853 445679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred EEEeCCCc-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 99999975 9999886543 2378999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+...... .......|++.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 151 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~ 207 (288)
T cd07871 151 RAKSVPT------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGS 207 (288)
T ss_pred eeccCCC------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 7542211 11123457899999998865 56899999999999999999999999654
No 65
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.4e-37 Score=316.14 Aligned_cols=251 Identities=29% Similarity=0.452 Sum_probs=194.7
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
++|++.+.||+|+||.||+|.++++..+|+|.+... ....+.+.+|++++++++||||+++++++. .....++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEEE
Confidence 458888999999999999999988889999987533 233467889999999999999999999864 34567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.++.
T Consensus 78 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred EEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccc
Confidence 99999999999987543 1388999999999999999999999 999999999999999999999999999876
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+....+...
T Consensus 150 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~~~~ 222 (256)
T cd05114 150 VLDDEYT-----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFRLYR 222 (256)
T ss_pred cCCCcee-----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCCCCC
Confidence 4322111 1112235668999999988889999999999999999999 8999854321 111111111111100
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
+.... ..+.+++.+||+.+|++|||++|+++.|
T Consensus 223 ~~~~~----------------------~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLAS----------------------MTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCC----------------------HHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 11111 1122377799999999999999999886
No 66
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-38 Score=308.53 Aligned_cols=270 Identities=28% Similarity=0.364 Sum_probs=208.5
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
+.|+..+.||+|.-|+||++..++ +..+|+|+++++. .....+...|-+||+.++||.++.+|+. ++.+.+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccce
Confidence 356677899999999999999875 6899999997653 3445677889999999999999999999 567778
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.|+|||||+||+|..+.+++. +..+++..+..++..++.||+|||-. |||.|||||+||||.++|++-|+||.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp----~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQP----GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred eEEEEecCCCccHHHHHhhCC----CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 899999999999999987765 56699999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcC--------------------------------C------------------CccccccccccCCCCccCc
Q 004218 611 LARSLLERIG--------------------------------N------------------QSSISSTHVLKGSIGYIPP 640 (767)
Q Consensus 611 ~a~~~~~~~~--------------------------------~------------------~~~~~~~~~~~gt~~y~aP 640 (767)
++........ . .........++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 9865421000 0 0011122346799999999
Q ss_pred cccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh--hcccchhhhccHHHHHhhhcchhhHHHHHHH
Q 004218 641 EYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES--NFPKNAQQVLDRELRQLMMSSESQTIQLHDC 718 (767)
Q Consensus 641 E~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 718 (767)
|++.+...+.++|+|+||+++|||+.|..||......+. +...+.+ .+|... .
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-l~NIv~~~l~Fp~~~------------------------~ 359 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-LRNIVGQPLKFPEEP------------------------E 359 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhh-HHHHhcCCCcCCCCC------------------------c
Confidence 999999999999999999999999999999977543322 2222211 122211 1
Q ss_pred HHHHHHHHhccccCCCCCCCCC----HHHHHHH--HHHHHHHHhhcCCC
Q 004218 719 LITIIESVGLSCTTESPGGRID----IREALRR--LKNAQKILLKRRQP 761 (767)
Q Consensus 719 ~~~~l~~l~~~cl~~dP~~Rpt----~~evl~~--L~~~~~~~~~~~~~ 761 (767)
+...+++||++.|.+||++|.- |.||-++ ++.+...+.+...|
T Consensus 360 vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~P 408 (459)
T KOG0610|consen 360 VSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRCARP 408 (459)
T ss_pred chhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheeccCC
Confidence 1222344777899999999998 8887654 45554444444333
No 67
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.2e-37 Score=321.50 Aligned_cols=260 Identities=29% Similarity=0.442 Sum_probs=199.2
Q ss_pred hcCCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
.++|.+.+.||+|+||.||+|...+ ++.||+|.+...... ..+.+.+|+++++.++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT----- 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----
Confidence 3568889999999999999998643 478999998654433 4578999999999999999999999964
Q ss_pred cceeeEEEEeecCCCChhhhhcccCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERK--------NEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
.....++||||+++++|.+++..... ......+++.++..++.|++.|++|||+. +++||||||+||++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 34567999999999999999976532 11234588999999999999999999999 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAG 677 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 677 (767)
+.++.+||+|||.++........ .......++..|+|||++.+..++.++||||+|+++|||++ |..||......
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~ 231 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYY----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE 231 (280)
T ss_pred cCCCeEEECCcccceecccCcce----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999754322110 01122335778999999999999999999999999999998 99998543221
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.....+............. ..+.+++.+||+.||++|||+.|+++.|+
T Consensus 232 --~~~~~~~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 --EVIECITQGRLLQRPRTCP----------------------SEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHHHHHHcCCcCCCCCCCC----------------------HHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111111111111111111 11223777899999999999999999885
No 68
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.1e-38 Score=326.02 Aligned_cols=201 Identities=28% Similarity=0.452 Sum_probs=167.4
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+++++.++||||+++++++. .....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCeE
Confidence 468999999999999999999976 588999999864432 23346788999999999999999999854 45578
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999996 58888876543 2388999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++...... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...
T Consensus 150 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 207 (303)
T cd07869 150 ARAKSVPS------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM 207 (303)
T ss_pred ceeccCCC------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 86432211 11123457899999998765 45788999999999999999999999754
No 69
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.6e-38 Score=318.85 Aligned_cols=257 Identities=29% Similarity=0.463 Sum_probs=203.0
Q ss_pred HHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
+...+|++.+.||.|+||.||+|.+.+++.||+|.+..........+.+|+++++.++||||+++++++. .....
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 77 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPV 77 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCe
Confidence 3456799999999999999999998889999999997665555677889999999999999999999864 44567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++++|.+++.... +..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPE----GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred EEEEeecccCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 99999999999999997643 23489999999999999999999998 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
+......... .....++..|+|||...+..++.++||||||+++|+|++ |+.||...... .........+.
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~ 222 (261)
T cd05148 151 ARLIKEDVYL------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITAGYR 222 (261)
T ss_pred hhhcCCcccc------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHhCCc
Confidence 9765332111 112335678999999988889999999999999999998 89998553211 11111111111
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
.......+ ..+.+++.+||+.||.+|||++++++.|+.
T Consensus 223 ~~~~~~~~----------------------~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 223 MPCPAKCP----------------------QEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCC----------------------HHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 11111111 112237778999999999999999999975
No 70
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-37 Score=327.33 Aligned_cols=200 Identities=24% Similarity=0.399 Sum_probs=171.7
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.++|++.+.||+|+||.||+|.+. ++..||+|.+..... .....+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEE-----ECCEE
Confidence 468999999999999999999976 588899998865422 33467889999999999999999999964 44578
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++|+|.+++.... .+++..+..++.|++.|++|||+. .+|+||||||+||++++++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 99999999999999997543 388999999999999999999974 1799999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+....... .....|+..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 151 ~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 151 SGQLIDSM--------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred chhhhhhc--------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 97653321 12345889999999999888999999999999999999999998653
No 71
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=331.47 Aligned_cols=352 Identities=24% Similarity=0.251 Sum_probs=317.7
Q ss_pred CCCccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEE
Q 004218 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMY 80 (767)
Q Consensus 1 l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L 80 (767)
|++|+++.|..|.++ .||..... ..+|+.|+|.+|.|..+-.+.++.++.|+.||||.|.|+...-..|..-.++++|
T Consensus 101 l~nLq~v~l~~N~Lt-~IP~f~~~-sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L 178 (873)
T KOG4194|consen 101 LPNLQEVNLNKNELT-RIPRFGHE-SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKL 178 (873)
T ss_pred CCcceeeeeccchhh-hccccccc-ccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEE
Confidence 578999999999998 99987764 7889999999999998778899999999999999999995555678888899999
Q ss_pred eecCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEE
Q 004218 81 NIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLN 160 (767)
Q Consensus 81 ~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~ 160 (767)
+|++|.|+....+ .+.++.+|..|.|+.|+++...+..|.++++ |+.|+|..|+|.-.-.-+|.++++|+.|.
T Consensus 179 ~La~N~It~l~~~------~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~-L~~LdLnrN~irive~ltFqgL~Sl~nlk 251 (873)
T KOG4194|consen 179 NLASNRITTLETG------HFDSLNSLLTLKLSRNRITTLPQRSFKRLPK-LESLDLNRNRIRIVEGLTFQGLPSLQNLK 251 (873)
T ss_pred eeccccccccccc------cccccchheeeecccCcccccCHHHhhhcch-hhhhhccccceeeehhhhhcCchhhhhhh
Confidence 9999999986544 5677789999999999999555566666998 99999999999855577899999999999
Q ss_pred CcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCC
Q 004218 161 LSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNG 240 (767)
Q Consensus 161 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 240 (767)
|..|+|.....++|-.+.++++|+|+.|++...-..++.+++.|+.|+||+|.|..+.++.+.-.++|+.|+|++|+|+.
T Consensus 252 lqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~ 331 (873)
T KOG4194|consen 252 LQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITR 331 (873)
T ss_pred hhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccccc
Confidence 99999998888999999999999999999998888899999999999999999999999999999999999999999998
Q ss_pred CCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCC---cccccCcccceeeccCccccCCCCc
Q 004218 241 NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLP---NSFKNCKSLEKLLMANNKFSGPIPN 317 (767)
Q Consensus 241 ~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~---~~~~~l~~L~~L~l~~n~l~~~~~~ 317 (767)
..+..|..+..|.++ +|+.|+++.+-...|..+++|+.|||++|.|+..+. ..|.+|++|+.|.+.+|+|..+...
T Consensus 332 l~~~sf~~L~~Le~L-nLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~kr 410 (873)
T KOG4194|consen 332 LDEGSFRVLSQLEEL-NLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKR 410 (873)
T ss_pred CChhHHHHHHHhhhh-cccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchh
Confidence 888899999999555 999999998888899999999999999999876543 4688899999999999999987788
Q ss_pred hhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcC
Q 004218 318 ILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVV 363 (767)
Q Consensus 318 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 363 (767)
+|.++++|++|||.+|.|..+.|.+|..| +|+.|-+..-.+-+..
T Consensus 411 Afsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 411 AFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDC 455 (873)
T ss_pred hhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEec
Confidence 99999999999999999999999999999 9999998766665543
No 72
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2e-37 Score=320.69 Aligned_cols=264 Identities=29% Similarity=0.436 Sum_probs=201.6
Q ss_pred cCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|.+.+.||+|+||.||++... ++..||+|.+........+.+.+|++++++++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 46888999999999999999852 24568999887555555677899999999999999999999964 34
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC-------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN-------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED 601 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 601 (767)
...++||||+++++|.+++...... .....+++.+++.++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 5679999999999999999754321 1123489999999999999999999998 99999999999999999
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcc
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~ 680 (767)
+.+||+|||.++....... ........++..|+|||++.+..++.++||||||+++|+|++ |..||.......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~-- 230 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-- 230 (288)
T ss_pred CcEEeccCCccccccCCce----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--
Confidence 9999999999975532211 011122335778999999998889999999999999999998 889985532211
Q ss_pred hhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHH
Q 004218 681 LVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKI 754 (767)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 754 (767)
....+............+ ..+.+++.+||+.||.+|||+.|+.+.|+++.+.
T Consensus 231 ~~~~i~~~~~~~~~~~~~----------------------~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 231 VIECITQGRVLQRPRTCP----------------------KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHHHcCCcCCCCCCCC----------------------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111111100000000011 1123377799999999999999999999998764
No 73
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-37 Score=326.98 Aligned_cols=242 Identities=28% Similarity=0.370 Sum_probs=188.6
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||++... +++.||+|++... .......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 46899999999999965 5899999998643 233456788999999999999999999884 45567899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 999999999886543 389999999999999999999999 99999999999999999999999999987532
Q ss_pred hhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQV 696 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (767)
... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+.... ...+..
T Consensus 147 ~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--~~~~~~~~~~-~~~p~~ 217 (328)
T cd05593 147 TDA------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMED-IKFPRT 217 (328)
T ss_pred Ccc------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--HHHHHhccCC-ccCCCC
Confidence 111 1123356899999999999889999999999999999999999999653211 1111110000 000111
Q ss_pred ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 697 LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
++ . .+.+++.+||+.||++|| ++.|++++
T Consensus 218 ~~------------------~----~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LS------------------A----DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CC------------------H----HHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11 1 122366689999999997 89999876
No 74
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.3e-37 Score=326.63 Aligned_cols=242 Identities=26% Similarity=0.343 Sum_probs=187.7
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||++... +|+.||+|++... .......+.+|+++++.++||||+++++++ ......++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 46899999999999965 5899999998653 223445677899999999999999999985 34567899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 999999999886543 389999999999999999999999 99999999999999999999999999986432
Q ss_pred hhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQV 696 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (767)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... ...+..
T Consensus 147 ~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~~~~~~-~~~p~~ 217 (323)
T cd05595 147 SDG------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILMEE-IRFPRT 217 (323)
T ss_pred CCC------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCC-CCCCCC
Confidence 111 1112356899999999999989999999999999999999999998643211 1111100000 000111
Q ss_pred ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 697 LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
+++ .+.+++.+||+.||++|| ++.+++++
T Consensus 218 ~~~----------------------~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 218 LSP----------------------EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCH----------------------HHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 111 122366689999999998 88888764
No 75
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.6e-37 Score=327.42 Aligned_cols=266 Identities=25% Similarity=0.400 Sum_probs=199.6
Q ss_pred hcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDF 525 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 525 (767)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++++ +|+||++++++|..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~--- 82 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK--- 82 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec---
Confidence 357999999999999999999742 25789999986432 22345678899999999 89999999998753
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCC----------------------------------------------------
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKN---------------------------------------------------- 553 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 553 (767)
.+..++++|||+++++|.+++......
T Consensus 83 -~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 83 -PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred -CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 345678999999999999998643210
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCcccccccc
Q 004218 554 ---EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHV 630 (767)
Q Consensus 554 ---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 630 (767)
....++++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..+...... .....
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~----~~~~~ 234 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----VRKGD 234 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch----hhccC
Confidence 0012589999999999999999999999 9999999999999999999999999999865332111 11123
Q ss_pred ccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcch
Q 004218 631 LKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSE 709 (767)
Q Consensus 631 ~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 709 (767)
..++..|+|||++.+..++.++||||+||++|||++ |..||......+ ..............+...
T Consensus 235 ~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~------------ 301 (337)
T cd05054 235 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTRMRAPEYA------------ 301 (337)
T ss_pred CCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCCCCCCccC------------
Confidence 345778999999999999999999999999999998 999986532211 111111100000000000
Q ss_pred hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 710 SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 710 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
...+.+++.+||+.+|++||++.|++++|+.+..
T Consensus 302 ----------~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 302 ----------TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ----------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0112237778999999999999999999988754
No 76
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.6e-37 Score=316.79 Aligned_cols=255 Identities=24% Similarity=0.400 Sum_probs=198.3
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.++|++.++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++. .....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 78 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT-----KEEPIYI 78 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCcEE
Confidence 35788999999999999999998888899999875432 23567889999999999999999999853 4455799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||.+.
T Consensus 79 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 151 (261)
T cd05072 79 ITEYMAKGSLLDFLKSDE----GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLAR 151 (261)
T ss_pred EEecCCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccce
Confidence 999999999999997543 23488999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
....... .......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+...++..
T Consensus 152 ~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~ 224 (261)
T cd05072 152 VIEDNEY-----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYRMP 224 (261)
T ss_pred ecCCCce-----eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCCC
Confidence 6533211 11122335678999999988889999999999999999998 99998543211 1111111111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
....++ . .+.+++.+||+.+|++|||++++.+.|++
T Consensus 225 ~~~~~~------------------~----~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 225 RMENCP------------------D----ELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCC------------------H----HHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000111 1 12237778999999999999999999875
No 77
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=309.25 Aligned_cols=249 Identities=25% Similarity=0.368 Sum_probs=202.2
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
-|.++.+||+|+||.||+|.+++ |+.||+|.+..+ .+.+++.+|+.+|++++.|++|++||.|+ ....+|+|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYF-----K~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYF-----KHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhc-----cCCceEee
Confidence 36677899999999999999765 999999998744 46788999999999999999999999864 34457999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
||||..|+..+.++..+ .++++.++..+++..++||+|||.. .-+|||||+.||+++.+|.+||+|||.|..
T Consensus 107 MEYCGAGSiSDI~R~R~-----K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARR-----KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred hhhcCCCcHHHHHHHhc-----CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence 99999999999998765 4599999999999999999999998 889999999999999999999999999987
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
+.+.... ...+.||+.|||||++..-.|+.++||||+|++..||..|++||.+..+-..- -.+....|+
T Consensus 179 LTDTMAK------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI--FMIPT~PPP--- 247 (502)
T KOG0574|consen 179 LTDTMAK------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI--FMIPTKPPP--- 247 (502)
T ss_pred hhhhHHh------hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee--EeccCCCCC---
Confidence 7654332 35678999999999999999999999999999999999999999765332110 011111111
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. ..-.+....-+.+++++||-++|++|-||-+++++
T Consensus 248 -T----------------F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 248 -T----------------FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred -C----------------CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1 11112222233347778999999999999998775
No 78
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-37 Score=333.15 Aligned_cols=194 Identities=23% Similarity=0.299 Sum_probs=165.3
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.++|++.+.||+|+||.||+|.+. +++.||+|... .+.+.+|++++++++||||+++++++. .....+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeE
Confidence 357999999999999999999975 58899999753 245678999999999999999999854 455679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+|++. ++|.+++.... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 160 lv~e~~~-~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 160 LILPRYK-TDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred EEEecCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 9999995 68988886543 389999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 230 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 230 CFPVDIN-----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ccccccc-----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 6532211 1112345699999999999998999999999999999999999988643
No 79
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.7e-37 Score=316.26 Aligned_cols=264 Identities=25% Similarity=0.364 Sum_probs=196.7
Q ss_pred CCCCCccccccceEEEEEEeCC-Cc--EEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc-cccee
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GI--SVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF-KNMEF 530 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 530 (767)
|.+.+.||+|+||.||+|++.+ +. .||+|.++.. .....+.+.+|+++++.++||||+++++++..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999764 32 6999988643 23345678899999999999999999998754321 22235
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.+++|||+++|+|.+++...+.......+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885443222234589999999999999999999998 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
.++........ .......++..|+|||...+..++.++||||||+++|||++ |+.||..... ......+....
T Consensus 158 ~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~ 231 (272)
T cd05075 158 LSKKIYNGDYY----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLRQGN 231 (272)
T ss_pred cccccCcccce----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcCC
Confidence 99865432110 01122345678999999999899999999999999999999 7888854221 11111111100
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
...... .. ...+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 232 ~~~~~~------------------~~----~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RLKQPP------------------DC----LDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCC------------------CC----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 00 11123377799999999999999999999864
No 80
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.1e-37 Score=326.07 Aligned_cols=191 Identities=30% Similarity=0.403 Sum_probs=164.4
Q ss_pred cccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||+|+||.||+|... +++.||+|++... .......+.+|+.++++++||||+++++++. .....++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence 699999999999976 4889999998643 2334566788999999999999999998853 456789999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 9999999997543 389999999999999999999999 9999999999999999999999999998753221
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 147 D------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred C------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence 1 112345689999999999999999999999999999999999999965
No 81
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.8e-38 Score=329.27 Aligned_cols=246 Identities=25% Similarity=0.316 Sum_probs=193.6
Q ss_pred hcCCCCCCccccccceEEEEEEeCC--CcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE--GISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.++|++.+.||+|+||.||+|.++. +..||+|++... .....+.+.+|+++++.++||||+++++++. ..
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----DE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----eC
Confidence 3579999999999999999998643 368999998643 2334567889999999999999999999954 45
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 67899999999999999997643 389999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+...
T Consensus 175 FG~a~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~~i~~~ 243 (340)
T PTZ00426 175 FGFAKVVDTR---------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIYQKILEG 243 (340)
T ss_pred CCCCeecCCC---------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHHHHHhcC
Confidence 9999754221 12356899999999999888999999999999999999999999653211 111111000
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
.. ..+..+++ .+.+++.+|++.||++|+ +++|++++
T Consensus 244 ~~-~~p~~~~~----------------------~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 244 II-YFPKFLDN----------------------NCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CC-CCCCCCCH----------------------HHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 00 00111111 122366789999999995 89998876
No 82
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.8e-37 Score=316.22 Aligned_cols=260 Identities=24% Similarity=0.351 Sum_probs=200.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|+.. +++.||||.+... .......+.+|+++++.++||||+++++++. ..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 57999999999999999999965 5899999987542 2233456889999999999999999999854 3456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +++||||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 79999999999999988643221 23488999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh-hc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES-NF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~ 689 (767)
.+........ ......|+..|+|||.+.+..++.++||||+|+++|||++|+.||.............+.. .+
T Consensus 152 ~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 225 (267)
T cd08228 152 LGRFFSSKTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY 225 (267)
T ss_pred cceeccchhH------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC
Confidence 9876533211 1123457889999999988889999999999999999999999985532221111111111 11
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
+...... ....+.+++.+||+.+|++||++.|+++.+++++
T Consensus 226 ~~~~~~~----------------------~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 226 PPLPTEH----------------------YSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CCCChhh----------------------cCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 1111011 1112233777899999999999999999998753
No 83
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.7e-37 Score=320.25 Aligned_cols=264 Identities=28% Similarity=0.447 Sum_probs=202.2
Q ss_pred cCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
++|.+.+.||+|+||.||+|... ++..|++|.+........+.+.+|++++++++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----DG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----cC
Confidence 45788899999999999999853 24568999886555555577899999999999999999999964 34
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
...++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 5679999999999999999754321 1123489999999999999999999999 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAG 677 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 677 (767)
+.++.++|+|||+++....... ........++..|+|||++.+..++.++||||||+++|||+| |+.||......
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~ 232 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 232 (291)
T ss_pred ccCCcEEECCCCcccccCCCce----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 9999999999999975433211 011123346788999999998899999999999999999999 99998653221
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKI 754 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 754 (767)
. ................. ...+.+++.+||+.||++|||++++++.|+++.+.
T Consensus 233 ~--~~~~~~~~~~~~~~~~~----------------------~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 233 E--VIECITQGRVLERPRVC----------------------PKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred H--HHHHHhCCCCCCCCccC----------------------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1 11111111110000000 11123377799999999999999999999998764
No 84
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=6.5e-37 Score=314.72 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=198.7
Q ss_pred CCCCCccccccceEEEEEEeCC----CcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCc-ccce
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDF-KNME 529 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 529 (767)
|++.+.||+|+||.||+|.... +..||+|.+..... .....+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5778999999999999998642 36799999864422 234578899999999999999999998754332 3334
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++|+|.+++...+.......+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5799999999999999986654332334689999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|.++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||...... ...+.....
T Consensus 158 g~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~ 231 (273)
T cd05035 158 GLSKKIYSGDYYR----QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHG 231 (273)
T ss_pred cceeecccccccc----ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 9997653321111 1112234678999999988889999999999999999999 88888553221 111111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
.......... + . +.+++.+||+.||++|||+.|+++.|+++
T Consensus 232 ~~~~~~~~~~------------------~---~-~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NRLKQPEDCL------------------D---E-LYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCCcCCC------------------H---H-HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111111 1 1 22277789999999999999999999864
No 85
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-37 Score=322.27 Aligned_cols=276 Identities=24% Similarity=0.311 Sum_probs=195.2
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcC---CCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNT---RHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|++.+.||+|+||.||+|.+. +++.||+|.++... ......+.+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999976 48899999986432 22234566777777665 799999999987654444556
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++ +|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP----PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 78999999975 8999886543 23489999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh-
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN- 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~- 688 (767)
|+++...... ......||..|+|||++.+..++.++||||+||++|+|++|++||....... .+.+.....
T Consensus 153 g~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~ 224 (288)
T cd07863 153 GLARIYSCQM-------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIG 224 (288)
T ss_pred CccccccCcc-------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhC
Confidence 9997653221 1123457899999999998889999999999999999999999986532211 111111100
Q ss_pred ccc--chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPK--NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+. .........-.................+...+.+++.+|+++||++|||+.|++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 225 LPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred CCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000 00000000000000000000011111122333457789999999999999999864
No 86
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.2e-37 Score=330.33 Aligned_cols=265 Identities=23% Similarity=0.401 Sum_probs=199.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCC-CCCceeEEeeeecCC
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIEST-GTWKSFFAECEALRNTR-HRNLVKLITSCSSLD 524 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 524 (767)
..++|.+.+.||+|+||.||+|.+.. +..||||++..... ...+.+.+|+++++++. ||||++++++|.
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~--- 111 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT--- 111 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc---
Confidence 35689999999999999999998632 34799999864432 33467889999999996 999999999964
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCC---------------------------------------------------
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKN--------------------------------------------------- 553 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 553 (767)
.....++||||+++|+|.+++...+..
T Consensus 112 --~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 112 --KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred --cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 345679999999999999998653210
Q ss_pred ---------------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCC
Q 004218 554 ---------------------------------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPG 594 (767)
Q Consensus 554 ---------------------------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 594 (767)
.....+++.++..++.|++.||+|||+. +|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChH
Confidence 0123488899999999999999999998 9999999999
Q ss_pred CeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCC
Q 004218 595 NILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673 (767)
Q Consensus 595 NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~ 673 (767)
||+++.++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||..
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~ 342 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSNY----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPG 342 (400)
T ss_pred hEEEeCCCEEEEEeCCcceeccccccc----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcc
Confidence 999999999999999999765332111 11122346788999999998889999999999999999997 8899865
Q ss_pred cccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 674 SFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
...... ....+....+...... ....+.+++.+||+.||++|||+.++.+.|+++.
T Consensus 343 ~~~~~~-~~~~~~~~~~~~~~~~----------------------~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 343 MIVDST-FYNKIKSGYRMAKPDH----------------------ATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred cchhHH-HHHHHhcCCCCCCCcc----------------------CCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 322111 1111111111000000 1111223777899999999999999999998753
No 87
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=342.89 Aligned_cols=265 Identities=23% Similarity=0.319 Sum_probs=201.0
Q ss_pred HHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc-
Q 004218 450 LRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF- 525 (767)
Q Consensus 450 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 525 (767)
.....++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+..+..++|+|++++++.+...+.
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 3445679999999999999999999864 58999999986542 2345567899999999999999999877643221
Q ss_pred --ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 004218 526 --KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT 603 (767)
Q Consensus 526 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~ 603 (767)
.....+++||||+++|+|.+++..... ....+++..+..++.|++.||.|||+. +|+||||||+||+++.++.
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGL 181 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCC
Confidence 112257899999999999999975432 134589999999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 182 vkL~DFGls~~~~~~~~~----~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~-~~~ 256 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSD----DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV-MHK 256 (496)
T ss_pred EEEEecccCeeccccccc----cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHH
Confidence 999999999765432111 112345689999999999999999999999999999999999999964321100 000
Q ss_pred HhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 684 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
......+ ..+..++ ..+.+++.+||+.||++||++.+++++
T Consensus 257 ~~~~~~~-~~~~~~~----------------------~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAGRYD-PLPPSIS----------------------PEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcCCCC-CCCCCCC----------------------HHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0000000 0011111 112236778999999999999999875
No 88
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3e-37 Score=318.86 Aligned_cols=260 Identities=28% Similarity=0.458 Sum_probs=197.2
Q ss_pred cCCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
..|++.+.||+|+||.||+|.... ...||+|.+..... .....+.+|+++++.++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----K 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----C
Confidence 468889999999999999998643 25799998864332 33456889999999999999999999864 3
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNE----------HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNIL 597 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 597 (767)
....+++|||+++|+|.+++....... ....+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 455799999999999999997643211 014588999999999999999999999 9999999999999
Q ss_pred eCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCccc
Q 004218 598 LDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFA 676 (767)
Q Consensus 598 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~ 676 (767)
+++++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY----RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc----cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999754322111 11122346788999999988889999999999999999998 9999865322
Q ss_pred CCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 677 GEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
. .....+...........+. ..+.+++.+||+.||++||+++|++++|++
T Consensus 233 ~--~~~~~i~~~~~~~~~~~~~----------------------~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 Q--EVIEMIRSRQLLPCPEDCP----------------------ARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred H--HHHHHHHcCCcCCCcccCC----------------------HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1 1111111111111111111 112237778999999999999999999975
No 89
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.8e-37 Score=330.26 Aligned_cols=247 Identities=29% Similarity=0.395 Sum_probs=185.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.+|+..+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+++++.++|+||+++++++ ...+.++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEE
Confidence 34567789999999999999975 589999999864432 2346788999999999999999999985 4556789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++|+|.+.. ..++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986532 156778889999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCC-----CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCc-chhhHhh
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV-SLVKWVE 686 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~~ 686 (767)
+....... ......||..|+|||++.. ...+.++|||||||++|||++|+.||........ .......
T Consensus 216 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 289 (353)
T PLN00034 216 RILAQTMD------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC 289 (353)
T ss_pred eecccccc------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh
Confidence 76532211 1123468999999998743 2345689999999999999999999963221111 0000000
Q ss_pred hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...+......+. . .+.+++.+||+.||++|||+.|++++
T Consensus 290 ~~~~~~~~~~~~------------------~----~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 290 MSQPPEAPATAS------------------R----EFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ccCCCCCCCccC------------------H----HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000011111 1 12236778999999999999999986
No 90
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.8e-37 Score=313.56 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=197.9
Q ss_pred cCCCCCCccccccceEEEEEEeCC----CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
++|++.+.||+|+||.||+|.+.. ...||+|.++.... ...+.+.+|+.++++++||||+++++++. ...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KSR 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cCC
Confidence 578999999999999999999752 45799998865432 33467889999999999999999999853 445
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+||
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 79 PVMIITEYMENGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECcc
Confidence 6799999999999999997643 2489999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|+++......... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... .....+...
T Consensus 151 g~~~~~~~~~~~~----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~ 224 (266)
T cd05033 151 GLSRRLEDSEATY----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDG 224 (266)
T ss_pred chhhcccccccce----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcC
Confidence 9998764211111 1112234678999999998899999999999999999998 99998543211 111221111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
.......... ..+.+++.+||+.+|++||++.|++++|+++
T Consensus 225 ~~~~~~~~~~----------------------~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 YRLPPPMDCP----------------------SALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCC----------------------HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1111111011 1122377799999999999999999999865
No 91
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-37 Score=342.83 Aligned_cols=254 Identities=20% Similarity=0.252 Sum_probs=195.3
Q ss_pred CCCCCCccccccceEEEEEEeC-C-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-E-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++||||+++++++. .++.+++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEE
Confidence 4889999999999999999854 3 6789999875554455567788999999999999999999954 4567899
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++|+|.+++..... ...++++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 143 v~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 9999999999998864321 123488999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..........+. .
T Consensus 218 ~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~-~~~~~~~~~~~~-~ 291 (478)
T PTZ00267 218 QYSDSVS----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE-IMQQVLYGKYDP-F 291 (478)
T ss_pred ecCCccc----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCC-C
Confidence 6543211 111234568999999999999999999999999999999999999986422110 000101111100 0
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+..++ . .+.+++.+||+.||++||+++|++.+
T Consensus 292 ~~~~s------------------~----~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 292 PCPVS------------------S----GMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CccCC------------------H----HHHHHHHHHhccChhhCcCHHHHHhC
Confidence 00111 1 12236678999999999999998754
No 92
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.5e-37 Score=313.73 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=196.8
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.+|++.+.||+|+||.||+|.+++ ++.||+|.+... ....+.+.+|+++++.++||||+++++++. .+...++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCcEE
Confidence 457888999999999999999754 889999998643 334567889999999999999999999864 3456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 80 v~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECN----RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 999999999999996543 23489999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .........++..
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~ 225 (263)
T cd05052 153 LMTGDTYT-----AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKGYRME 225 (263)
T ss_pred ccccceee-----ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCCCC
Confidence 65432111 1112224567999999998899999999999999999998 88898542211 1111111111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
....++ ..+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 226 ~~~~~~----------------------~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCP----------------------PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCC----------------------HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111111 1122377789999999999999999999764
No 93
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=3.4e-37 Score=323.30 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=197.8
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCc----EEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGI----SVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|++.+.||+|+||.||+|.+. +++ .||+|.+.... ....+++.+|+.+++.++||||++++++|...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 46899999999999999999864 233 48999986432 33456788999999999999999999997532
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 3479999999999999997643 2388999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 687 (767)
||+++......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .+......
T Consensus 153 fG~a~~~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~ 226 (316)
T cd05108 153 FGLAKLLGADEKEY----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK 226 (316)
T ss_pred ccccccccCCCcce----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhC
Confidence 99998654321111 1112224678999999999999999999999999999998 99998653221 11111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
............ . +.+++.+||..||++|||+.+++..+..+.+..
T Consensus 227 ~~~~~~~~~~~~---------------------~-~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 227 GERLPQPPICTI---------------------D-VYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCCCCCCCCCCH---------------------H-HHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 110000111111 1 122777899999999999999999998876544
No 94
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.6e-37 Score=312.73 Aligned_cols=255 Identities=29% Similarity=0.461 Sum_probs=198.3
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.++|++.+.||+|++|.||+|.+.+++.||+|.++... ...+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCeee
Confidence 45789999999999999999998778889999986433 33567889999999999999999999854 4456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++.... +..+++.++..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 79 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 79 VTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred eeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 999999999999997543 23489999999999999999999998 99999999999999999999999999998
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ .......+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+....+..
T Consensus 152 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~ 224 (261)
T cd05068 152 VIKEDIYE-----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQGYRMP 224 (261)
T ss_pred EccCCccc-----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCC
Confidence 66422111 0111223457999999998899999999999999999999 99998653211 1111111111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
...... ..+.+++.+|++.+|++||++.++++.|++
T Consensus 225 ~~~~~~----------------------~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 225 CPPGCP----------------------KELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCcCC----------------------HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 011011 112237778999999999999999999975
No 95
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.5e-37 Score=332.38 Aligned_cols=205 Identities=25% Similarity=0.329 Sum_probs=170.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++. +...+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 5888999999999999999965 48899999996532 234567889999999999999999999854 45678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 99999999999999987643 388999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCC-----------------------------------------ccccccccccCCCCccCccccCCCCCCC
Q 004218 612 ARSLLERIGNQ-----------------------------------------SSISSTHVLKGSIGYIPPEYGLGEKPST 650 (767)
Q Consensus 612 a~~~~~~~~~~-----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 650 (767)
++......... ..........||..|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 76432110000 0000112356999999999999888999
Q ss_pred cccchhhhHHHHHHHhCCCCCCCc
Q 004218 651 AGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 651 ~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++||||+||++|||++|+.||...
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~ 251 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAP 251 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCC
Confidence 999999999999999999999654
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.6e-37 Score=326.54 Aligned_cols=199 Identities=28% Similarity=0.371 Sum_probs=167.2
Q ss_pred CCCCCCccccccceEEEEEEeC----CCcEEEEEEeecc----CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIE----STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 526 (767)
+|++.+.||+|+||.||+++.. +++.||+|++... .....+.+.+|+++++.+ +||+|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4888999999999999999853 4789999998643 223345678899999999 599999999884 4
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
.+..+++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 5567899999999999999986543 389999999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+|||+++....... .......||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 147 ~DfG~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 147 TDFGLSKEFLSEEK-----ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred eeCcCCccccccCC-----CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 99999975432211 112235689999999998765 478899999999999999999999964
No 97
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.4e-37 Score=317.05 Aligned_cols=275 Identities=28% Similarity=0.372 Sum_probs=199.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-----CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-----EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
.+|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 57889999999999999999742 478999999876555556788999999999999999999998653 2344
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++|+|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 6799999999999999996543 2389999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
|++.......... .......++..|+|||++.+..++.++||||||+++|||++|..|+...... .........
T Consensus 153 g~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~ 226 (284)
T cd05081 153 GLTKVLPQDKEYY---KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDK 226 (284)
T ss_pred cccccccCCCcce---eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhccccc
Confidence 9998654321110 0011122345699999998888999999999999999999998775432111 001000000
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
+ .......+...+..... ..........+.+++.+||+.+|++||||.|+++.|+.+
T Consensus 227 ~---~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 227 Q---GQMIVYHLIELLKNNGR--LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred c---cccchHHHHHHHhcCCc--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 00011111111110000 000000111233477799999999999999999999865
No 98
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-37 Score=319.23 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=197.0
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.+|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++.+. .+...++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEEE
Confidence 58899999999999999999964 58899999997665556678889999999999999999999854 3456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++.... +++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 95 v~e~~~~~~L~~~~~~~~-------~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 95 VMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred eecccCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 999999999999986432 78999999999999999999999 99999999999999999999999999987
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc-c
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK-N 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~ 692 (767)
....... ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||........ .........+. .
T Consensus 165 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~ 237 (296)
T cd06654 165 QITPEQS------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQ 237 (296)
T ss_pred hcccccc------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhcCCCCCCC
Confidence 5432211 11234578899999999888889999999999999999999999965332111 11111000000 0
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
... .+...+.+++.+||..||++|||+.|++++
T Consensus 238 ~~~----------------------~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 238 NPE----------------------KLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred Ccc----------------------ccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 000 111223337778999999999999999974
No 99
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1e-37 Score=332.61 Aligned_cols=206 Identities=28% Similarity=0.386 Sum_probs=174.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+++++.++||||+++++++ .++..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 47899999999999999999976 5899999998643 224456788999999999999999999884 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 899999999999999997653 389999999999999999999998 99999999999999999999999999
Q ss_pred chhhhhhhcCC-----------------------CccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhC
Q 004218 611 LARSLLERIGN-----------------------QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667 (767)
Q Consensus 611 ~a~~~~~~~~~-----------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg 667 (767)
++......... ...........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 99765433200 0000112345689999999999999999999999999999999999
Q ss_pred CCCCCCc
Q 004218 668 MSPTHES 674 (767)
Q Consensus 668 ~~p~~~~ 674 (767)
+.||...
T Consensus 227 ~~Pf~~~ 233 (350)
T cd05573 227 FPPFYSD 233 (350)
T ss_pred CCCCCCC
Confidence 9999654
No 100
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.1e-36 Score=312.03 Aligned_cols=260 Identities=27% Similarity=0.390 Sum_probs=201.7
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|++++++++++. .++.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 57999999999999999999976 6899999988532 2233567889999999999999999999864 3456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++..... ....+++.++..++.|++.|++|||+. +|+||||+|+||+++.++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 7999999999999999865332 134489999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh-hc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES-NF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~ 689 (767)
.+........ ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||................ .+
T Consensus 152 ~~~~~~~~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 225 (267)
T cd08224 152 LGRFFSSKTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY 225 (267)
T ss_pred eeeeccCCCc------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC
Confidence 9875432211 1123457889999999988889999999999999999999999985432211111111110 01
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
+..... .....+.+++.+||..+|++|||+.++++.+++++
T Consensus 226 ~~~~~~----------------------~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 226 PPLPAD----------------------HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCChh----------------------hcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 100000 11112233777899999999999999999998764
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.3e-37 Score=315.81 Aligned_cols=273 Identities=26% Similarity=0.317 Sum_probs=198.3
Q ss_pred cCC-CCCCccccccceEEEEEEe-----CCCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 455 GNF-SHENLIGSGSFGSVYKGYL-----REGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 455 ~~~-~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
++| ++.+.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~ 79 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QG 79 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CC
Confidence 344 8889999999999988653 2477899999865432 345678899999999999999999998753 23
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....++||||+++++|.+++.... +++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+
T Consensus 80 ~~~~~lv~e~~~~~~l~~~~~~~~-------l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~ 149 (283)
T cd05080 80 GKGLQLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIG 149 (283)
T ss_pred CceEEEEecCCCCCCHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEe
Confidence 456799999999999999996533 89999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
|||+++......... .......++..|+|||.+.+..++.++||||||+++|||++|+.||................
T Consensus 150 dfg~~~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 150 DFGLAKAVPEGHEYY---RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred ecccccccCCcchhh---ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 999997654321110 00112235667999999988889999999999999999999999986543221111111000
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
. .....+.......... .........+.+++.+||+.||++|||++++++.|+++.
T Consensus 227 ---~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 ---Q----MTVVRLIELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ---c----cchhhhhhhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0 0000111110000000 000001112333777999999999999999999998864
No 102
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.7e-37 Score=330.00 Aligned_cols=206 Identities=26% Similarity=0.351 Sum_probs=172.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+.++++++||||+++++.+ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 36889999999999999999965 48899999986432 23345678899999999999999999985 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 899999999999999997643 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCC-----------------------------ccccccccccCCCCccCccccCCCCCCCcccchhhhHHH
Q 004218 611 LARSLLERIGNQ-----------------------------SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVML 661 (767)
Q Consensus 611 ~a~~~~~~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il 661 (767)
+++......... ..........||+.|+|||++.+..++.++||||+||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 987543211000 000001235699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCc
Q 004218 662 LEIFTGMSPTHES 674 (767)
Q Consensus 662 ~el~tg~~p~~~~ 674 (767)
|||++|+.||...
T Consensus 227 ~ell~G~~Pf~~~ 239 (363)
T cd05628 227 YEMLIGYPPFCSE 239 (363)
T ss_pred HHHHhCCCCCCCC
Confidence 9999999999653
No 103
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.3e-37 Score=312.30 Aligned_cols=252 Identities=25% Similarity=0.411 Sum_probs=194.2
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
+.|++.+.||+|+||.||+|.+.++..||+|.+... ....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-----QRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-----CCCcEEE
Confidence 457888999999999999999877777999988633 2334678999999999999999999999643 3456999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++|+|.+++..... .+++..++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.++.
T Consensus 78 ~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~ 149 (256)
T cd05113 78 TEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRY 149 (256)
T ss_pred EEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCcccee
Confidence 999999999999975432 389999999999999999999999 999999999999999999999999999875
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
...... .......++..|+|||...+..++.++||||||+++|+|++ |+.||...... .....+........
T Consensus 150 ~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 222 (256)
T cd05113 150 VLDDEY-----TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQGLRLYR 222 (256)
T ss_pred cCCCce-----eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcCCCCCC
Confidence 533211 01112235678999999988889999999999999999998 99998543221 11111111111100
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
..... ..+.+++.+||+.||.+|||+.++++.|+
T Consensus 223 ~~~~~----------------------~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLAS----------------------EKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCC----------------------HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11111 11223777899999999999999998763
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.3e-37 Score=323.89 Aligned_cols=242 Identities=26% Similarity=0.353 Sum_probs=186.9
Q ss_pred CccccccceEEEEEEeC----CCcEEEEEEeecc----CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 461 NLIGSGSFGSVYKGYLR----EGISVAVKVLDIE----STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+.||+|+||.||+++.. +++.||+|++... .......+.+|+++++.++||||+++++++. .++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeEE
Confidence 67999999999999853 4789999998643 2233456778999999999999999999853 455789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 LILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 9999999999999987543 378889999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
+...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......... .
T Consensus 148 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~-~~~~~~~~~~--~ 218 (323)
T cd05584 148 KESIHEG------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKK-TIDKILKGKL--N 218 (323)
T ss_pred eecccCC------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHH-HHHHHHcCCC--C
Confidence 6432211 11233568999999999998889999999999999999999999996532110 0000000000 0
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
.+..++ ..+.+++.+||+.||++|| ++.+++++
T Consensus 219 ~~~~~~----------------------~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 219 LPPYLT----------------------PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CCCCCC----------------------HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 011111 1122377789999999999 78888774
No 105
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-37 Score=333.25 Aligned_cols=206 Identities=26% Similarity=0.349 Sum_probs=172.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|++. +++.||||++... .......+.+|+++++.++||||+++++++ ..+..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 46899999999999999999976 4899999999643 223445678899999999999999999985 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 899999999999999987543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCcc--------------------------------ccccccccCCCCccCccccCCCCCCCcccchhhh
Q 004218 611 LARSLLERIGNQSS--------------------------------ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFG 658 (767)
Q Consensus 611 ~a~~~~~~~~~~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG 658 (767)
+++.+......... ........||+.|+|||++.+..++.++||||+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 98754321100000 0001124589999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCc
Q 004218 659 VMLLEIFTGMSPTHES 674 (767)
Q Consensus 659 ~il~el~tg~~p~~~~ 674 (767)
|++|||++|..||...
T Consensus 227 ~il~el~~G~~Pf~~~ 242 (364)
T cd05599 227 VIMYEMLVGYPPFCSD 242 (364)
T ss_pred hHHHHhhcCCCCCCCC
Confidence 9999999999999653
No 106
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7.5e-38 Score=318.02 Aligned_cols=250 Identities=34% Similarity=0.519 Sum_probs=186.4
Q ss_pred CCCccccccceEEEEEEeC-----CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 459 HENLIGSGSFGSVYKGYLR-----EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 459 ~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+.+.||.|.||.||+|.+. .+..|+||.+..... ...+.+.+|++.+++++||||++++|+|. ..+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence 4578999999999999977 267899999964333 34688999999999999999999999986 233379
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++|+|.+++.... ...+++.++..|+.|+++||+|||++ +++||||+++||++++++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred ccccccccccccccccccc----cccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 9999999999999998762 23489999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
....... .........+...|+|||.+....++.++||||||+++||+++ |+.||..... ..+...+......
T Consensus 151 ~~~~~~~----~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~~~~~~~ 224 (259)
T PF07714_consen 151 RPISEKS----KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKLKQGQRL 224 (259)
T ss_dssp EETTTSS----SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHHHTTEET
T ss_pred ccccccc----cccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccc
Confidence 7652211 1111223346778999999988889999999999999999999 6788755421 1112222221111
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
..+..++..+. +++.+||+.||++|||+.|+++.|
T Consensus 225 ~~~~~~~~~~~----------------------~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIY----------------------SLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHH----------------------HHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHH----------------------HHHHHHcCCChhhCcCHHHHHhcC
Confidence 11222222222 266789999999999999999876
No 107
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-37 Score=325.63 Aligned_cols=242 Identities=27% Similarity=0.354 Sum_probs=187.4
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||++... +++.||+|++... .......+.+|+++++.++||||+++++++ ......++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46899999999999965 5899999999653 223345678899999999999999999884 44567899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
|+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999886543 38999999999999999999997 6 9999999999999999999999999998643
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+... ....+.
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~~~-~~~~p~ 217 (325)
T cd05594 147 IKDG------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILME-EIRFPR 217 (325)
T ss_pred CCCC------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHhcC-CCCCCC
Confidence 2111 1112346899999999999989999999999999999999999999653211 111111000 000011
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
.+++ .+.+++.+||+.||++|+ ++.|++++
T Consensus 218 ~~~~----------------------~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 218 TLSP----------------------EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCH----------------------HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 1111 122366689999999997 89999875
No 108
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.1e-37 Score=323.55 Aligned_cols=197 Identities=27% Similarity=0.399 Sum_probs=165.3
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHH---hcCCCCCceeEEeeeecCCcccce
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEAL---RNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
|++.+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++ +.++||||+++++++ ....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 677899999999999999965 58999999996432 23345566776665 456899999999985 4556
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..|+||||+++|+|..++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 789999999999999888643 389999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|+++..... ........|++.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 146 g~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~ 204 (324)
T cd05589 146 GLCKEGMGF------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGD 204 (324)
T ss_pred cCCccCCCC------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCC
Confidence 998643211 11123456899999999999989999999999999999999999999653
No 109
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.5e-37 Score=310.32 Aligned_cols=251 Identities=29% Similarity=0.449 Sum_probs=193.5
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.+|++.+.||+|+||.||+|.++++..+|+|.+... ......+.+|++++++++||||+++++++. .....++|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEEE
Confidence 357888999999999999999887778999988532 223457889999999999999999999854 34567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 78 ~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~ 149 (256)
T cd05059 78 TEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARY 149 (256)
T ss_pred EecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCccccee
Confidence 999999999999975432 389999999999999999999999 999999999999999999999999999876
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
..+.... ......++..|+|||.+.+..++.++||||||+++|++++ |+.||...... .....+....+...
T Consensus 150 ~~~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 222 (256)
T cd05059 150 VLDDQYT-----SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAGYRLYR 222 (256)
T ss_pred ccccccc-----ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHcCCcCCC
Confidence 5322110 0111223467999999998899999999999999999999 88998653221 11111111111111
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
....+. .+.+++.+||..+|++|||+.|+++.|
T Consensus 223 ~~~~~~----------------------~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPT----------------------EVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCH----------------------HHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 111111 122377799999999999999999886
No 110
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.1e-38 Score=324.58 Aligned_cols=247 Identities=28% Similarity=0.453 Sum_probs=199.3
Q ss_pred CCCccccccceEEEEEEeCC-CcEEEEEEeec----cCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 459 HENLIGSGSFGSVYKGYLRE-GISVAVKVLDI----ESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 459 ~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
...+||+|+|-+||+|.+.. |..||--.++. ..+...++|..|+++|+.++||||+++++++.+.. ...+-+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceeee
Confidence 34679999999999999754 77777544322 24445688999999999999999999999987532 366789
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEEccccch
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD-EDMTAKVGDFGLA 612 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~Dfg~a 612 (767)
|+|.+..|+|..|..+.++ ++...+..|++||++||.|||++ .++|+|||||.+||||+ ..|.|||+|+|+|
T Consensus 121 iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 9999999999999998775 88999999999999999999998 77999999999999998 4589999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
+...... ...+.|||.|||||++. ..|++.+||||||+++.||+|+.+||........-+.+-..+..|..
T Consensus 194 tl~r~s~--------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~s 264 (632)
T KOG0584|consen 194 TLLRKSH--------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAA 264 (632)
T ss_pred HHhhccc--------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHH
Confidence 8764332 13367999999999876 78999999999999999999999999765443333333333444444
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...+-++.++. +|.+|+.. .++|||+.|+++.
T Consensus 265 l~kV~dPevr~----------------------fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 265 LSKVKDPEVRE----------------------FIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred hhccCCHHHHH----------------------HHHHHhcC-chhccCHHHHhhC
Confidence 44554554444 55679999 9999999999864
No 111
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.7e-37 Score=345.20 Aligned_cols=269 Identities=22% Similarity=0.309 Sum_probs=198.7
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.++||+|+||.||+|.+. +++.||+|++..... ...+++.+|++++++++||||+++++++. +++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence 58999999999999999999976 489999999864322 23457889999999999999999999854 4456
Q ss_pred eEEEEeecCCCChhhhhcccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 004218 531 LALVYEFLGNGSLGDWIHGERKN-----EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
.++||||++||+|.+++...... ......++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 79999999999999998643211 1123467888899999999999999999 999999999999999999999
Q ss_pred EccccchhhhhhhcCCC------------ccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 606 VGDFGLARSLLERIGNQ------------SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
|+|||+++......... ..........||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 99999998652111000 001111235699999999999999999999999999999999999999965
Q ss_pred cccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHHHHH
Q 004218 674 SFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-DIREALRRLKNAQ 752 (767)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-t~~evl~~L~~~~ 752 (767)
............ ..+.... . ...+...+.+++.+|++.||++|| +++++.+.|+...
T Consensus 234 ~~~~ki~~~~~i--~~P~~~~----------------p----~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 234 KKGRKISYRDVI--LSPIEVA----------------P----YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred cchhhhhhhhhc--cChhhcc----------------c----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 322111100000 0000000 0 000111223377789999999997 5666777777654
Q ss_pred H
Q 004218 753 K 753 (767)
Q Consensus 753 ~ 753 (767)
.
T Consensus 292 q 292 (932)
T PRK13184 292 Q 292 (932)
T ss_pred h
Confidence 4
No 112
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.3e-37 Score=322.43 Aligned_cols=193 Identities=28% Similarity=0.377 Sum_probs=164.4
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+. +++.||+|+++.. .....+.+.+|..+++.+ +||||+++++++ .....+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 46899999999999975 4889999999753 223345678899999888 799999999985 3456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 9999999999886543 399999999999999999999999 9999999999999999999999999998642
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
... ........||..|+|||++.+..++.++||||+||++|+|++|+.||+.
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 198 (329)
T cd05588 147 IRP------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ccC------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence 111 1112345689999999999999999999999999999999999999964
No 113
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.5e-37 Score=315.68 Aligned_cols=261 Identities=23% Similarity=0.341 Sum_probs=196.0
Q ss_pred HhcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF 525 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 525 (767)
..++|++.+.||+|+||.||+|.+. ++..||+|.+.... .....++.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4678999999999999999999854 25679999885332 223456889999999999999999999853
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNE----HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED 601 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 601 (767)
.+...++||||+++|+|.+++...+... ....+++..+..++.|++.|++|||+. +++||||||+||+++++
T Consensus 80 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 80 -QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 155 (277)
T ss_pred -CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCC
Confidence 4456799999999999999997543211 123468889999999999999999998 99999999999999999
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcc
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~ 680 (767)
+.++|+|||+++......... ......++..|+|||++.+..++.++||||||+++|||++ |..||...... .
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~ 229 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYYR----KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--Q 229 (277)
T ss_pred CCEEECCCCCccccCCcceee----cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 999999999987543321111 0112235678999999998889999999999999999999 68888543221 1
Q ss_pred hhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 681 LVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
..+.+............ ...+.+++.+||+.||++|||+.|+++.|+
T Consensus 230 ~~~~~~~~~~~~~~~~~----------------------~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 230 VLRFVMEGGLLDKPDNC----------------------PDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHcCCcCCCCCCC----------------------CHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11111111000001101 112233777999999999999999999886
No 114
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1e-37 Score=333.05 Aligned_cols=254 Identities=21% Similarity=0.259 Sum_probs=192.9
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
..++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+.+++.++||||+++++++ .++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 3568999999999999999999975 4889999998643 223345577899999999999999999884 455
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~~-------l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNYD-------IPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 67899999999999999986532 78889999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCC----CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhH
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE----KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 684 (767)
||.+........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||....... .....
T Consensus 186 fG~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i 259 (370)
T cd05596 186 FGTCMKMDANGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKI 259 (370)
T ss_pred ccceeeccCCCc-----ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHHH
Confidence 999976432211 111235689999999988653 37889999999999999999999996532110 01111
Q ss_pred hhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCC--CCCHHHHHHH
Q 004218 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGG--RIDIREALRR 747 (767)
Q Consensus 685 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rpt~~evl~~ 747 (767)
.........+. ... +...+.+++.+|++.+|.+ |||++|++++
T Consensus 260 ~~~~~~~~~~~----------------~~~----~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 260 MDHKNSLTFPD----------------DIE----ISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HcCCCcCCCCC----------------cCC----CCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 10000000000 000 1112223667899999988 9999999876
No 115
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.5e-37 Score=334.13 Aligned_cols=206 Identities=26% Similarity=0.313 Sum_probs=171.0
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
+.|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36899999999999999999965 4899999998543 123346678999999999999999999985 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 899999999999999997643 388899999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCC-------------------------------------CccccccccccCCCCccCccccCCCCCCCccc
Q 004218 611 LARSLLERIGN-------------------------------------QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGD 653 (767)
Q Consensus 611 ~a~~~~~~~~~-------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 653 (767)
++..+...... ...........||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 97533110000 00000112356999999999999999999999
Q ss_pred chhhhHHHHHHHhCCCCCCCc
Q 004218 654 VYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 654 v~slG~il~el~tg~~p~~~~ 674 (767)
|||+||++|||++|+.||...
T Consensus 227 iwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred eeeccceeeehhhCCCCCCCC
Confidence 999999999999999999654
No 116
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.9e-37 Score=326.71 Aligned_cols=204 Identities=27% Similarity=0.358 Sum_probs=169.8
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-ccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKN 527 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 527 (767)
...++|++.+.||+|+||.||+|.+. +|+.||+|++... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34578999999999999999999975 4899999998543 2334567889999999999999999999875432 223
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~ 165 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 165 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 3467999999975 67666632 278889999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|||+++..... .......||..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 166 Dfg~a~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 166 DFGLARTACTN-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred cCCCccccccC-------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 99999754221 1112346899999999999999999999999999999999999999754
No 117
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.7e-37 Score=330.77 Aligned_cols=204 Identities=24% Similarity=0.329 Sum_probs=171.6
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
....++|++.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.+++.++||||+++++++ .
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~ 113 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----Q 113 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----E
Confidence 334578999999999999999999976 4889999998642 223345678899999999999999999984 4
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
++..+++||||+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+||++++++.+||
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~~~-------~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 114 DDKYLYMVMEYMPGGDLVNLMSNYD-------VPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEE
Confidence 5667899999999999999996532 88899999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC----CCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK----PSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+|||++........ .......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...
T Consensus 184 ~DFG~a~~~~~~~~-----~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~ 250 (370)
T cd05621 184 ADFGTCMKMDETGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYAD 250 (370)
T ss_pred EecccceecccCCc-----eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCC
Confidence 99999976532111 1113456999999999986543 788999999999999999999999653
No 118
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.6e-37 Score=322.96 Aligned_cols=194 Identities=30% Similarity=0.407 Sum_probs=164.5
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|+.+ +++.||+|++... .....+.+..|..+++.. +||||+++++++ .....+++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 46899999999999976 4889999998643 233456677888888876 699999999985 4556789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 9999999999987643 389999999999999999999999 9999999999999999999999999998643
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 147 IFN------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred CcC------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 211 11123456899999999999889999999999999999999999999653
No 119
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.1e-37 Score=321.81 Aligned_cols=193 Identities=28% Similarity=0.381 Sum_probs=163.6
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++.++ +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 46999999999999975 4889999999754 223345677898888776 899999999985 3456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 9999999999886543 389999999999999999999999 9999999999999999999999999998743
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.... .......||..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 147 LRPG------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred cCCC------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 2111 112345689999999999999999999999999999999999999954
No 120
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=7e-37 Score=321.75 Aligned_cols=199 Identities=26% Similarity=0.369 Sum_probs=167.1
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCC-CceeEEeeeecCCccccee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNTRHR-NLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~~ 530 (767)
+|++.+.||+|+||.||+|+... ++.||+|++... .....+.+..|.+++..+.|+ +|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 47889999999999999999764 789999998643 233456778899999999765 577787774 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 899999999999999987543 388999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++...... ........||+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 147 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (324)
T cd05587 147 MCKENIFG------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 204 (324)
T ss_pred cceecCCC------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 98642111 11123456899999999999999999999999999999999999999653
No 121
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-36 Score=309.04 Aligned_cols=249 Identities=30% Similarity=0.427 Sum_probs=194.8
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.+|++.+.||+|+||.||++... |..||+|.+... ...+.+.+|+.++++++|+|++++++++. ..+...++|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~lv 78 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYIV 78 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEEE
Confidence 47888999999999999999876 788999988533 33467889999999999999999999753 234567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++++|.+++.... ...+++..+..++.|++.||+|||++ +++||||||+||++++++.+||+|||.+..
T Consensus 79 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 79 TEYMAKGSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred EECCCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCcccee
Confidence 99999999999987543 23488999999999999999999999 999999999999999999999999999875
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
..... ....++..|+|||++.+..++.++|||||||++|+|++ |+.||..... ......+....+...
T Consensus 152 ~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~ 220 (256)
T cd05082 152 ASSTQ---------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDA 220 (256)
T ss_pred ccccC---------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCCCC
Confidence 42211 12234567999999988889999999999999999998 9999854211 111111111111111
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
.+..+ ..+.+++.+||+.+|++|||+.++++.|+.
T Consensus 221 ~~~~~----------------------~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 221 PDGCP----------------------PVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCC----------------------HHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 11111 122237778999999999999999999875
No 122
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.1e-37 Score=317.09 Aligned_cols=269 Identities=25% Similarity=0.313 Sum_probs=203.7
Q ss_pred cCHHHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeec
Q 004218 445 ISYDELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSS 522 (767)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 522 (767)
+.++.+..+.++|++.+.||+|+||.||+|... +++.||+|+..... .....+.+|+.+++.+ +||||+++++++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 556677788899999999999999999999975 48899999875422 2335678899999999 69999999998865
Q ss_pred CCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 004218 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM 602 (767)
Q Consensus 523 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 602 (767)
.....+...++||||+++++|.+++..... ....+++..+..++.|++.|+.|||+. +++||||||+||+++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLK--RGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEG 161 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhc--cCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCC
Confidence 555566788999999999999998764321 123488999999999999999999999 999999999999999999
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC-----CCCCCcccchhhhHHHHHHHhCCCCCCCcccC
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 677 (767)
.+||+|||.++....... ......|+..|+|||++.. ..++.++||||+||++|||++|+.||......
T Consensus 162 ~~kl~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~ 235 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRL------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM 235 (286)
T ss_pred CEEEccCCceeecccCCC------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh
Confidence 999999999876532211 1123458899999998753 44788999999999999999999998653221
Q ss_pred CcchhhHhhhhcccc-hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKN-AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
. ..........+.. .....+ ..+.+++.+||+.||++|||+.|++++.
T Consensus 236 ~-~~~~~~~~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 236 R-ALFKIPRNPPPTLHQPELWS----------------------NEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred H-HHhhccccCCCcccCCCCcC----------------------HHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1 0100000000000 000000 1122377789999999999999999763
No 123
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=318.44 Aligned_cols=250 Identities=26% Similarity=0.349 Sum_probs=203.5
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCc---chhhHHHHHHHHhcCC-CCCceeEEeeeecCCccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTG---TWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 527 (767)
....|++.+.||+|.||.||+++.+. |+.+|+|++.+.... ....+.+|+++|+++. ||||+.+++++ ++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----ED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----Ec
Confidence 45678999999999999999999775 999999999765332 3468899999999998 99999999995 45
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC----Cc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED----MT 603 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~----~~ 603 (767)
...+++|||++.||.|.+.+... .+++.++..++.|++.|++|||+. ||+|||+||+|+++... +.
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 56789999999999999999765 189999999999999999999998 99999999999999633 57
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
+|++|||++..... .......+||+.|+|||++....|+..+||||+|+++|.|++|.+||.......... .
T Consensus 178 ik~~DFGla~~~~~-------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~ 249 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKP-------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-A 249 (382)
T ss_pred EEEeeCCCceEccC-------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-H
Confidence 99999999987643 223467889999999999999999999999999999999999999997644322211 1
Q ss_pred Hhhh--hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 684 WVES--NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 684 ~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... .++...+..+. ..+++++..|+..||.+|+|+.+++++
T Consensus 250 i~~~~~~f~~~~w~~is----------------------~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 250 ILRGDFDFTSEPWDDIS----------------------ESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred HHcCCCCCCCCCccccC----------------------HHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111 12222222222 223346668999999999999999996
No 124
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.6e-36 Score=310.18 Aligned_cols=254 Identities=22% Similarity=0.335 Sum_probs=194.7
Q ss_pred CCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCC------cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST------GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|++.+.||+|+||.||+|...+++.+|+|.+..... ...+.+.+|++++++++|+||+++++++. ...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~ 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DDN 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cCC
Confidence 4888999999999999999988899999998864321 12356889999999999999999999964 346
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+|+||+|+||++++++.++|+||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 76 TISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred eEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccc
Confidence 7799999999999999996543 278999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh-h
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES-N 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~ 688 (767)
|.+....................|+..|+|||++.+..++.++||||+|+++|+|++|+.||........ ....... .
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~~~~~~~~~ 225 (265)
T cd06631 147 GCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-MFYIGAHRG 225 (265)
T ss_pred hhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-HHHhhhccC
Confidence 9998653321111111112334588999999999988899999999999999999999999964321110 0000000 0
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
.........+ ..+.+++.+||+.+|++||++.|+++
T Consensus 226 ~~~~~~~~~~----------------------~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 226 LMPRLPDSFS----------------------AAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCCC----------------------HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000111111 11223677899999999999999976
No 125
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.1e-36 Score=311.36 Aligned_cols=257 Identities=26% Similarity=0.347 Sum_probs=194.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCc----EEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGI----SVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
++|++.+.||+|+||.||+|.+. +++ +|++|.+..... ....++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 46888899999999999999974 344 477887753322 234567788889999999999999998632
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 23578999999999999997543 2389999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 687 (767)
||.++........ .......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... ...+.+..
T Consensus 153 fg~~~~~~~~~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~ 226 (279)
T cd05111 153 FGVADLLYPDDKK----YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEK 226 (279)
T ss_pred CccceeccCCCcc----cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHC
Confidence 9999765332111 11123446788999999988889999999999999999998 99998653221 11111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
............ . +.+++.+||..||++|||+.|+++.|..+.+
T Consensus 227 ~~~~~~~~~~~~---------------------~-~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 227 GERLAQPQICTI---------------------D-VYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCcCCCCCCCCH---------------------H-HHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 111010111110 1 1126678999999999999999999988765
No 126
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-36 Score=314.08 Aligned_cols=260 Identities=27% Similarity=0.419 Sum_probs=195.6
Q ss_pred cCCCCCCccccccceEEEEEEe-----CCCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYL-----REGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
..|++.+.||+|+||.||+|.+ .++..||+|.+.... ......+.+|+++++.++||||+++++++. .+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 4678889999999999999984 236789999986433 233467889999999999999999999854 44
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN-----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNIL 597 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 597 (767)
...++||||+++++|.+++...... .....+++.++..++.|++.||+|||++ +++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 5679999999999999998543210 0123488999999999999999999999 9999999999999
Q ss_pred eCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCccc
Q 004218 598 LDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFA 676 (767)
Q Consensus 598 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~ 676 (767)
+++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYY----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred EcCCCcEEeccccccccccCCcce----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 999999999999999765332111 11122335678999999988889999999999999999998 8889854321
Q ss_pred CCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 677 GEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
......+...........+++. +.+++.+||+.||++||++.++.++|+.
T Consensus 233 --~~~~~~~~~~~~~~~~~~~~~~----------------------~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 --QEVIEMVRKRQLLPCSEDCPPR----------------------MYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred --HHHHHHHHcCCcCCCCCCCCHH----------------------HHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111221111111111111111 2226678999999999999999998863
No 127
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.4e-36 Score=321.68 Aligned_cols=266 Identities=24% Similarity=0.378 Sum_probs=198.2
Q ss_pred hcCCCCCCccccccceEEEEEEe------CCCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYL------REGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDF 525 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 525 (767)
.++|++.+.||+|+||.||+|.+ .+++.||||+++... ......+.+|+.++.++ +||||+++++++..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 35799999999999999999974 247889999986433 23345688999999999 68999999998743
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCC---------------------------------------------------
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNE--------------------------------------------------- 554 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 554 (767)
.+..+++||||+++|+|.+++.......
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 83 -PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred -CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 3346789999999999999986532100
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCcc
Q 004218 555 ----------HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624 (767)
Q Consensus 555 ----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 624 (767)
....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 012478889999999999999999999 9999999999999999999999999999765322111
Q ss_pred ccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHH
Q 004218 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQ 703 (767)
Q Consensus 625 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 703 (767)
.......++..|+|||.+.+..++.++||||||+++|+|++ |..||....... ..............+...++
T Consensus 236 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---- 309 (343)
T cd05103 236 -VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTP---- 309 (343)
T ss_pred -hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccCCCCCCCCCCH----
Confidence 01112335678999999988889999999999999999997 888985532211 11111111100000111111
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 704 LMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
.+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 310 ------------------~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 310 ------------------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred ------------------HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11226778999999999999999999998765
No 128
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-37 Score=314.02 Aligned_cols=254 Identities=28% Similarity=0.410 Sum_probs=204.8
Q ss_pred CCCCCccccccceEEEEEEeCC---C--cEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE---G--ISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.+..+.||.|-||.||+|...+ | -.||||.-+.+ ..+..+.|+.|+.+|++++||||++++|+|... .
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------P 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------P 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------c
Confidence 4455689999999999999543 3 35888887653 445678899999999999999999999998643 3
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.|||||.++.|.|.+|++..+. .++......+++||+.||+|||+. .+|||||..+||++.+...+||+|||
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~-----sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKD-----SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred eeEEEecccchhHHHHHHhccc-----cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccc
Confidence 5999999999999999987654 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
+++.+.+......+ ...-...|||||.+.-.+++.++|||.||+++||++. |..||......+.-. .++..-
T Consensus 537 LSR~~ed~~yYkaS-----~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~--~iEnGe 609 (974)
T KOG4257|consen 537 LSRYLEDDAYYKAS-----RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG--HIENGE 609 (974)
T ss_pred hhhhccccchhhcc-----ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE--EecCCC
Confidence 99988766544332 1223567999999999999999999999999999986 899997754433211 111112
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
+...++.+.+.+.. ++.+||.+||.+||.+.|+...|.++..
T Consensus 610 RlP~P~nCPp~LYs----------------------lmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 610 RLPCPPNCPPALYS----------------------LMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCCCChHHHH----------------------HHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 22234445555543 5557999999999999999999988765
No 129
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1e-36 Score=314.28 Aligned_cols=266 Identities=22% Similarity=0.347 Sum_probs=203.7
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC-----CcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE-----GISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
..++|++.+.||+|+||.||+|.+.+ +..||+|.+... .....+.+.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---- 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE---- 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 34688999999999999999999765 688999988533 23345668899999999999999999998753
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCC--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCce
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKN--EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA 604 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~ 604 (767)
.+...++++||+++|+|.+++...... ..+..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 245568999999999999999764321 1124589999999999999999999998 99999999999999999999
Q ss_pred EEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhh
Q 004218 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVK 683 (767)
Q Consensus 605 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 683 (767)
||+|||+++.+....... ......++..|+|||++.+..++.++||||+|+++||+++ |+.||..... ..+..
T Consensus 157 kl~d~g~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~ 230 (280)
T cd05043 157 KITDNALSRDLFPMDYHC----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAA 230 (280)
T ss_pred EECCCCCcccccCCceEE----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHH
Confidence 999999997653321110 1112335678999999988889999999999999999999 9999865321 12222
Q ss_pred HhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 684 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
+....++......+++ .+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~----------------------~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 231 YLKDGYRLAQPINCPD----------------------ELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHcCCCCCCCCcCCH----------------------HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 2222111110111111 12237778999999999999999999998765
No 130
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=9e-37 Score=314.99 Aligned_cols=252 Identities=26% Similarity=0.348 Sum_probs=192.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
+|++.+.||+|+||.||++.+. +++.||+|++.... ......+.+|+++++.++||||+++++++. .+...
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-----CCCeE
Confidence 4788899999999999999965 58999999986432 222345778999999999999999999853 44578
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++|+|.+++.... ...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMG----NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 99999999999998886432 23489999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... ......|+..|+|||++.+..++.++||||+|+++|||++|+.||....... ..+.+...
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~~~~~--- 216 (285)
T cd05605 149 AVEIPEGE-------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREEVERR--- 216 (285)
T ss_pred ceecCCCC-------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHHHHHH---
Confidence 87543211 1123358899999999998889999999999999999999999996532111 00000000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
+.... ......+...+.+++.+||+.||++|| ++++++++
T Consensus 217 ---------~~~~~-------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 217 ---------VKEDQ-------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ---------hhhcc-------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00000 000011122233477799999999999 88898775
No 131
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.5e-37 Score=331.09 Aligned_cols=206 Identities=25% Similarity=0.335 Sum_probs=170.8
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++ .++.+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 36889999999999999999965 5899999998543 223346678899999999999999999985 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+|+||||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999997543 388999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCC---------ccc--------------------------------cccccccCCCCccCccccCCCCCC
Q 004218 611 LARSLLERIGNQ---------SSI--------------------------------SSTHVLKGSIGYIPPEYGLGEKPS 649 (767)
Q Consensus 611 ~a~~~~~~~~~~---------~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~ 649 (767)
+++.+....... ... .......||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 996432110000 000 000124699999999999998999
Q ss_pred CcccchhhhHHHHHHHhCCCCCCCc
Q 004218 650 TAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 650 ~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.++||||+||++|||++|+.||...
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~ 251 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSE 251 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCC
Confidence 9999999999999999999999653
No 132
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.6e-37 Score=322.05 Aligned_cols=194 Identities=27% Similarity=0.376 Sum_probs=164.2
Q ss_pred CccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|+... ++.||+|++... .....+.+..|.++++.+ +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 469999999999999764 789999998653 233445677899988866 799999999985 3456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999887543 389999999999999999999999 9999999999999999999999999998753
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.... .......||..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 147 ILNG------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred ccCC------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 2211 1123356899999999999889999999999999999999999999653
No 133
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.2e-36 Score=318.44 Aligned_cols=194 Identities=30% Similarity=0.450 Sum_probs=162.5
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|..++... +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999975 48899999986432 23345566677777654 899999999985 3456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999987543 389999999999999999999999 9999999999999999999999999999753
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~ 199 (316)
T cd05592 147 MNGE------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGE 199 (316)
T ss_pred CCCC------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCC
Confidence 2211 1123456899999999999989999999999999999999999999653
No 134
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9e-37 Score=319.11 Aligned_cols=241 Identities=29% Similarity=0.403 Sum_probs=184.6
Q ss_pred CccccccceEEEEEEeCC-CcEEEEEEeeccC---CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIES---TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+.+ ++.||+|+++... ....+.+..|..++... +||||+++++++. ..+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 468999999999999764 7899999986531 23445667788888764 8999999999853 455789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999997543 388999999999999999999999 9999999999999999999999999998643
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
... ........||..|+|||++.+..++.++||||+||++|||++|+.||...... .....+....+. .+.
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~~~~-~~~ 217 (316)
T cd05619 147 MLG------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMDNPC-YPR 217 (316)
T ss_pred CCC------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-CCc
Confidence 211 11123456899999999999989999999999999999999999999653211 111111111000 001
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHH-HHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIR-EALR 746 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl~ 746 (767)
.++ ..+.+++.+||+.||++||++. ++.+
T Consensus 218 ~~~----------------------~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 218 WLT----------------------REAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred cCC----------------------HHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 111 1122367789999999999997 5544
No 135
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2e-36 Score=308.45 Aligned_cols=254 Identities=27% Similarity=0.426 Sum_probs=196.4
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|++++++++++. ....++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIYI 77 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcEE
Confidence 357889999999999999999988888899999864332 3467899999999999999999998752 234689
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
+|||+++++|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred EEEecCCCcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeee
Confidence 999999999999997543 23489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......++..|+|||...+..++.++||||||+++|+|++ |..||...... ..........+..
T Consensus 151 ~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~ 223 (260)
T cd05070 151 LIEDNEYT-----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGYRMP 223 (260)
T ss_pred eccCcccc-----cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCC
Confidence 65322110 1112235668999999988889999999999999999999 88898553211 1111111111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
..... ...+.+++.+|+..+|++|||++++.+.|++
T Consensus 224 ~~~~~----------------------~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDC----------------------PISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcC----------------------CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01001 1123337779999999999999999998864
No 136
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.2e-36 Score=313.10 Aligned_cols=195 Identities=28% Similarity=0.405 Sum_probs=164.1
Q ss_pred cccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||+|+||.||++.+. +++.||+|.+.... ....+.+..|+++++.++||||+++.+++ ......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999965 58899999986432 22345677899999999999999999884 3455689999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 99999988754321 134589999999999999999999999 9999999999999999999999999999755332
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||..
T Consensus 151 ~~------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 151 QS------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred Cc------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 11 12234689999999999999999999999999999999999999965
No 137
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.8e-37 Score=333.19 Aligned_cols=205 Identities=28% Similarity=0.397 Sum_probs=165.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc---ccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF---KNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~~ 528 (767)
...+|++.+.||+|+||.||+|... +++.||||++.... ....+|+.+++.++||||+++++++....+ ...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999975 48899999885322 234579999999999999999987644322 223
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-ceEEc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-TAKVG 607 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-~~kl~ 607 (767)
.++++||||+++ ++.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 467899999975 78777754321 134589999999999999999999999 999999999999999664 79999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|||+|+.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|.+||...
T Consensus 214 DFGla~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 274 (440)
T PTZ00036 214 DFGSAKNLLAGQ-------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQ 274 (440)
T ss_pred ccccchhccCCC-------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998653321 11234579999999987654 6899999999999999999999999653
No 138
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2e-36 Score=308.50 Aligned_cols=255 Identities=29% Similarity=0.430 Sum_probs=196.5
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.++|++.+.||+|+||.||+|.+.+...||+|.++... ...+.+.+|+++++.++||||+++++++. ....++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcEE
Confidence 35799999999999999999998777789999986432 23467889999999999999999998742 234689
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++|+|.+++.... ...+++..+..++.|++.||+|+|+. +++||||||+||++++++.++|+|||.++
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~ 150 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLAR 150 (262)
T ss_pred EEEcCCCCcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCcee
Confidence 999999999999997532 23478999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......++..|+|||+..+..++.++||||||+++|+|++ |+.||....... .........+..
T Consensus 151 ~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~ 223 (262)
T cd05071 151 LIEDNEYT-----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYRMP 223 (262)
T ss_pred eccccccc-----cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHHHhcCCCCC
Confidence 65332111 1122345678999999988889999999999999999999 788885432211 111111000000
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
... . ....+.+++.+|++.||++||+++++++.|+..
T Consensus 224 ~~~------------------~----~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 224 CPP------------------E----CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred Ccc------------------c----cCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 000 0 111122377899999999999999999999864
No 139
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-36 Score=307.45 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=188.4
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
+.||+|+||.||+|.+. +++.||+|.+.... .+....+.+|++++++++||||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEeec
Confidence 46899999999999975 58899999875432 233567899999999999999999999964 345679999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 9999999986532 2388999999999999999999999 9999999999999999999999999998754321
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhc
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVL 697 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (767)
... .......++..|+|||.+.+..++.++||||+|+++|||++ |..||...... ..........+.......
T Consensus 148 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 221 (252)
T cd05084 148 VYA----STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQGVRLPCPELC 221 (252)
T ss_pred ccc----ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCCCCcccC
Confidence 100 00011123457999999988889999999999999999998 88888543211 111111111111111111
Q ss_pred cHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 698 DRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 698 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
+ ..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 222 ~----------------------~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 P----------------------DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred C----------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1 11223777899999999999999999885
No 140
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.8e-36 Score=313.99 Aligned_cols=262 Identities=25% Similarity=0.393 Sum_probs=197.2
Q ss_pred CCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
+|++.+.||+|+||.||+|.... ...+|+|.+..... ...+.+.+|+.+++.++||||+++++.+. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47788999999999999998632 35689998864432 23467889999999999999999999864 33
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeec
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN------------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCD 590 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 590 (767)
...++||||+++|+|.+++...+.. .....+++.+++.++.|++.||+|||+. +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 4569999999999999998753221 1123588999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCC
Q 004218 591 LKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMS 669 (767)
Q Consensus 591 lkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~ 669 (767)
|||+||++++++.+||+|||.++......... ......++..|+|||.+.+..++.++||||||+++|||++ |..
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~ 228 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYV----KRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 228 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchh----cccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999997653321111 1122335678999999988889999999999999999998 999
Q ss_pred CCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 670 PTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 670 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
||...... .+.......+......... . .+.+++.+||+.+|++||+++|+++.|+
T Consensus 229 p~~~~~~~--~~~~~~~~~~~~~~~~~~~------------------~----~~~~~i~~cl~~~P~~Rp~~~~i~~~l~ 284 (290)
T cd05045 229 PYPGIAPE--RLFNLLKTGYRMERPENCS------------------E----EMYNLMLTCWKQEPDKRPTFADISKELE 284 (290)
T ss_pred CCCCCCHH--HHHHHHhCCCCCCCCCCCC------------------H----HHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 98543211 1112211111111111111 1 1222777899999999999999999998
Q ss_pred HHHH
Q 004218 750 NAQK 753 (767)
Q Consensus 750 ~~~~ 753 (767)
++..
T Consensus 285 ~~~~ 288 (290)
T cd05045 285 KMMV 288 (290)
T ss_pred HHHh
Confidence 8754
No 141
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9.6e-37 Score=319.10 Aligned_cols=240 Identities=27% Similarity=0.381 Sum_probs=184.2
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.++ +|+.||+|+++... ....+.+..|..++... +||||+++++++ ...+.+++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 46999999999999976 48899999986532 23445667788888754 899999999985 4556789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 9999999999986543 389999999999999999999999 9999999999999999999999999998642
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
... ........||..|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+....+. .+.
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~~~~-~~~ 217 (316)
T cd05620 147 VFG------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVDTPH-YPR 217 (316)
T ss_pred ccC------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-CCC
Confidence 111 11123456899999999999999999999999999999999999999653211 111111111100 011
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHH-HHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIR-EAL 745 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~-evl 745 (767)
.+.. -+.+++.+||+.||++||++. +++
T Consensus 218 ~~~~----------------------~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WITK----------------------ESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCH----------------------HHHHHHHHHccCCHHHcCCChHHHH
Confidence 1111 122366789999999999985 555
No 142
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-36 Score=311.80 Aligned_cols=260 Identities=25% Similarity=0.368 Sum_probs=200.7
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +++.||||.+.... ....+++.+|+++++.++||||+++++++. .++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 47888999999999999999964 68999999875432 223457889999999999999999999854 4456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.+++|||+++++|.+++..... ....+++..++.++.|++.|++|||++ +++|+||||+||+++.++.++|+|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 7999999999999999864321 123589999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh-hc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES-NF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~ 689 (767)
.+........ ......|+..|+|||.+.+..++.++||||+|+++|+|++|..||...........+.+.. .+
T Consensus 152 ~~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 225 (267)
T cd08229 152 LGRFFSSKTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 225 (267)
T ss_pred hhhccccCCc------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCC
Confidence 9876533211 1123458889999999988889999999999999999999999986432221111111110 11
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
+...... ....+.+++.+||+.||++|||+.+|++.++++.
T Consensus 226 ~~~~~~~----------------------~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 226 PPLPSDH----------------------YSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCccc----------------------ccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111111 1112333677899999999999999999998764
No 143
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-36 Score=312.09 Aligned_cols=255 Identities=24% Similarity=0.352 Sum_probs=195.1
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.++|++.+.||+|+||.||+|... +++.||+|++..........+.+|+.++++++||||+++++++. .....+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 357999999999999999999964 58899999987555555567889999999999999999999864 345679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 83 iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999986533 389999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
........ ......|+..|+|||.+. ...++.++||||+||++|||++|+.||........ ........+
T Consensus 154 ~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~~ 226 (267)
T cd06646 154 AKITATIA------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSNF 226 (267)
T ss_pred eeeccccc------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCCC
Confidence 76532211 112345788999999874 34578899999999999999999999854322111 001111111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
...... . ... +...+.+++.+||+.+|++|||++++++++
T Consensus 227 ~~~~~~--~-------------~~~----~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPPKLK--D-------------KTK----WSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCc--c-------------ccc----cCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 100000 0 000 111223377799999999999999998764
No 144
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.3e-37 Score=331.03 Aligned_cols=205 Identities=25% Similarity=0.316 Sum_probs=170.3
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++.+. ++..+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 5889999999999999999965 48899999986432 234467889999999999999999999854 45678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 99999999999999987543 388999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCC-----------------------------------------CccccccccccCCCCccCccccCCCCCCC
Q 004218 612 ARSLLERIGN-----------------------------------------QSSISSTHVLKGSIGYIPPEYGLGEKPST 650 (767)
Q Consensus 612 a~~~~~~~~~-----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 650 (767)
+..+...... ...........||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 7533110000 00000112346899999999999999999
Q ss_pred cccchhhhHHHHHHHhCCCCCCCc
Q 004218 651 AGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 651 ~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++||||+||++|||++|+.||...
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCC
Confidence 999999999999999999999653
No 145
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-36 Score=307.79 Aligned_cols=250 Identities=26% Similarity=0.362 Sum_probs=195.9
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||+|... +++.|++|.+... .....+.+.+|+++++.++|||++++++++. .....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 4778899999999999999975 5899999998643 2345667889999999999999999999854 445779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... ...+++..++.++.|++.|+.|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQR----GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 9999999999999997642 23489999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
+....... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||...... .............
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~ 220 (256)
T cd08529 149 KLLSDNTN------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALILKIIRGVFPP 220 (256)
T ss_pred eeccCccc------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCC
Confidence 76543211 112345788999999999988999999999999999999999998653311 1111111100000
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
....++ ..+.+++.+||+.+|++||++.|++++
T Consensus 221 ~~~~~~----------------------~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VSQMYS----------------------QQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CccccC----------------------HHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 111111 112237778999999999999999874
No 146
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3e-36 Score=313.26 Aligned_cols=262 Identities=26% Similarity=0.417 Sum_probs=196.6
Q ss_pred cCCCCCCccccccceEEEEEEeCC-C--cEEEEEEeecc-CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-G--ISVAVKVLDIE-STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 529 (767)
++|++.+.||+|+||.||+|..++ + ..+++|.++.. .....+.+.+|+++++++ +||||+++++++. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 578999999999999999998754 3 34788887632 233456788999999999 7999999999854 345
Q ss_pred eeEEEEeecCCCChhhhhcccCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNE----------HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~ 599 (767)
..++||||+++|+|.+++....... ....+++..+..++.|++.|++|||++ +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 6799999999999999997543211 123588999999999999999999998 999999999999999
Q ss_pred CCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCC
Q 004218 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGE 678 (767)
Q Consensus 600 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~ 678 (767)
+++.+||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |+.||.......
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~ 226 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV-------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE 226 (297)
T ss_pred CCCeEEECCcCCCcccccee-------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 99999999999986422110 0111123557999999988889999999999999999997 999986532211
Q ss_pred cchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 679 VSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
................++ ..+.+++.+||+.+|.+|||++++++.|+.+.+..
T Consensus 227 --~~~~~~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 227 --LYEKLPQGYRMEKPRNCD----------------------DEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred --HHHHHhcCCCCCCCCCCC----------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111111110000011111 11223777999999999999999999998887654
No 147
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.7e-36 Score=308.25 Aligned_cols=253 Identities=25% Similarity=0.343 Sum_probs=194.5
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-----cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-----GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
++|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-----DD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-----cC
Confidence 47899999999999999999965 589999999864322 12356788999999999999999999954 44
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 57899999999999999987543 288999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
||.++........ ........|+..|+|||++.+..++.++||||+|+++|+|++|+.||...... ..........
T Consensus 148 fg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~ 223 (263)
T cd06625 148 FGASKRLQTICSS---GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-AAIFKIATQP 223 (263)
T ss_pred cccceeccccccc---cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-HHHHHHhccC
Confidence 9998755322111 01112345788999999999988999999999999999999999998643111 0011111110
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.....+..++. .+.+++.+||..+|.+|||+.|++++
T Consensus 224 ~~~~~~~~~~~----------------------~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 224 TNPQLPSHVSP----------------------DARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCCCCccCCH----------------------HHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 11111111111 12236678999999999999999875
No 148
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.6e-36 Score=315.07 Aligned_cols=265 Identities=25% Similarity=0.396 Sum_probs=198.9
Q ss_pred HHhcCCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecC
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSL 523 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 523 (767)
...++|++.+.||+|+||.||++.... ...||+|.+.... ......+.+|+++++++ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 86 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT-- 86 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc--
Confidence 345678899999999999999998642 3679999886432 23345688999999999 8999999999864
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCC
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKP 593 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 593 (767)
.+...+++|||+++|+|.+++...... .....+++..++.++.|++.|++|||+. +|+||||||
T Consensus 87 ---~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp 160 (293)
T cd05053 87 ---QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAA 160 (293)
T ss_pred ---CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccce
Confidence 345679999999999999999753210 1234589999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCC
Q 004218 594 GNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTH 672 (767)
Q Consensus 594 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 672 (767)
+||++++++.+||+|||.++......... ......++..|+|||.+.+..++.++|||||||++||+++ |..||.
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 236 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYR----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 236 (293)
T ss_pred eeEEEcCCCeEEeCcccccccccccccee----ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCC
Confidence 99999999999999999998654321111 1111234677999999988889999999999999999997 888885
Q ss_pred CcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 673 ESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
..... ................... ..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 237 ~~~~~--~~~~~~~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 237 GIPVE--ELFKLLKEGYRMEKPQNCT----------------------QELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCHH--HHHHHHHcCCcCCCCCCCC----------------------HHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 43211 1111111110000000000 11223777899999999999999999998763
No 149
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.8e-36 Score=311.38 Aligned_cols=247 Identities=23% Similarity=0.306 Sum_probs=185.6
Q ss_pred cccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||+|+||.||++..+ +|+.||+|.+.... ....+.+..|++++++++||||+++++++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999965 48999999985421 12234556799999999999999999885 3456789999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++.... ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 76 ~g~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVG----ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 9999998886443 23488999999999999999999998 9999999999999999999999999998765321
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhcc
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLD 698 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (767)
. ......|+..|+|||++.+..++.++||||+||++|||++|+.||....... .............
T Consensus 149 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~------ 214 (277)
T cd05607 149 K-------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDE------ 214 (277)
T ss_pred c-------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhccc------
Confidence 1 1123458899999999998889999999999999999999999986432111 0001100000000
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 699 RELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
... .. ..+...+.+++.+||+.||++||+++|+++.+
T Consensus 215 ------~~~---~~----~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 215 ------VKF---EH----QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ------ccc---cc----ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 000 00 00111223477789999999999997766444
No 150
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.5e-37 Score=327.12 Aligned_cols=275 Identities=21% Similarity=0.256 Sum_probs=194.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||+|.+. +++.||+|.+... .....+++.+|+++++.++||||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999964 5899999988543 223456788999999999999999999997654322234689
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||++ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999996 58888875433 389999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... .......++..|+|||++.+. .++.++||||+||++|||++|+.||....... .+ ..+......
T Consensus 151 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~-~~i~~~~g~ 223 (372)
T cd07853 151 RVEEPDES-----KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QL-DLITDLLGT 223 (372)
T ss_pred eecccCcc-----ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HH-HHHHHHcCC
Confidence 75432211 111233578899999998774 47899999999999999999999996543211 11 111110000
Q ss_pred chhhhc---cHHHHHhhhcchhhHHH------HHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVL---DRELRQLMMSSESQTIQ------LHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~---~~~l~~~~~~~~~~~~~------~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... .......+......... ........+.+++.+||+.||++|||+.|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 224 PSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000 00011111000000000 000111223347889999999999999999875
No 151
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=314.71 Aligned_cols=266 Identities=26% Similarity=0.377 Sum_probs=201.8
Q ss_pred HhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcc-hhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGT-WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
......++++||+|-||.|.++....+.+||||.++...... ..+|.+|+++|.+++||||++++|+|.. ++.+
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----DePi 610 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----DDPL 610 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----CCch
Confidence 345677889999999999999998878999999998765544 4889999999999999999999999964 3456
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++|+|||++|+|.+|+..+... .+......+|+.||+.|++||.+. ++||||+.++|+|++.++++||+|||+
T Consensus 611 cmI~EYmEnGDLnqFl~aheap----t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgm 683 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELP----TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGM 683 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCc----ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccc
Confidence 9999999999999999877532 134455678999999999999998 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh--CCCCCCCcccCCcchhhHhhhhc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT--GMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t--g~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
++.+......... ....-..+|||||.+.-+++++++|||+||+++||+++ ...||.+...+. .++....-+
T Consensus 684 sR~lysg~yy~vq----gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~ 757 (807)
T KOG1094|consen 684 SRNLYSGDYYRVQ----GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFF 757 (807)
T ss_pred ccccccCCceeee----cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhc
Confidence 9865443322221 22334688999999999999999999999999999876 678886543321 111111111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
+....+.+- ... .-|...+.+ ++.+||..|.++|||++++...|++.
T Consensus 758 ~~~~~~~~l-------~~P-------~~cp~~lye-lml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 758 RDQGRQVVL-------SRP-------PACPQGLYE-LMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred CCCCcceec-------cCC-------CcCcHHHHH-HHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111110000 000 001112222 77789999999999999999998753
No 152
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=315.51 Aligned_cols=251 Identities=22% Similarity=0.327 Sum_probs=197.4
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
..+|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++. .+...+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEE
Confidence 368999999999999999999964 58999999997655555677889999999999999999999854 455779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... +++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||.+
T Consensus 93 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~ 162 (297)
T cd06656 93 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (297)
T ss_pred EeecccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccc
Confidence 9999999999999986432 88999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......+++.|+|||.+.+..++.++||||+|+++|++++|+.||..................+..
T Consensus 163 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (297)
T cd06656 163 AQITPEQS------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ 236 (297)
T ss_pred eEccCCcc------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCC
Confidence 75432211 112345788999999999888999999999999999999999999653321111110000000000
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... +...+.+++.+||+.||++||++++++++
T Consensus 237 ~~~~----------------------~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 237 NPER----------------------LSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred Cccc----------------------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011 11122336778999999999999999884
No 153
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.2e-36 Score=306.24 Aligned_cols=248 Identities=25% Similarity=0.351 Sum_probs=189.5
Q ss_pred ccccccceEEEEEEeC---CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 462 LIGSGSFGSVYKGYLR---EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
.||+|+||.||+|.++ ++..||+|+++.... ...+.+.+|+.+++.++||||+++++++. ....++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 5899999999999753 478899999864432 23567889999999999999999999863 234589999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999996543 389999999999999999999998 99999999999999999999999999997654
Q ss_pred hhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
...... .......++..|+|||.+....++.++||||||+++|||++ |+.||...... .....+........+.
T Consensus 147 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~~~~~~~ 221 (257)
T cd05116 147 ADENYY---KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGERMECPQ 221 (257)
T ss_pred CCCCee---eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCCCCCCCC
Confidence 321110 01112234578999999988888999999999999999998 99998653221 1112221111111111
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
..++ .+.+++.+||+.||++||++++|.+.|++.
T Consensus 222 ~~~~----------------------~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPP----------------------EMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCH----------------------HHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1111 122377789999999999999999999753
No 154
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-36 Score=315.84 Aligned_cols=266 Identities=24% Similarity=0.383 Sum_probs=199.8
Q ss_pred hcCCCCCCccccccceEEEEEEeCC--------CcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecC
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE--------GISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSL 523 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 523 (767)
.++|.+.+.||+|+||.||+|.+.. +..||+|.+.... ......+.+|+++++.+ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~-- 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe--
Confidence 3579999999999999999998532 3569999987542 23456788899999999 7999999999964
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCC
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKP 593 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 593 (767)
.....++||||+++|+|.+++...+.. .....+++.++..++.|++.||+|||+. +++||||||
T Consensus 95 ---~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 95 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 334679999999999999999764321 1123589999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCC
Q 004218 594 GNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTH 672 (767)
Q Consensus 594 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 672 (767)
+||+++.++.+||+|||.++......... ......++..|+|||++.+..++.++||||+||++|||++ |+.||.
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYK----KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhh----ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999987553211100 0111224568999999988889999999999999999998 888875
Q ss_pred CcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 673 ESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
..... ..........+....... ...+.+++.+||..+|++|||+.|+++.|+++.
T Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~~~----------------------~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 245 GVPVE--ELFKLLKEGHRMDKPSNC----------------------TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred cCCHH--HHHHHHHcCCCCCCCCcC----------------------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 42211 111111111110000101 112223777899999999999999999999987
Q ss_pred HHH
Q 004218 753 KIL 755 (767)
Q Consensus 753 ~~~ 755 (767)
...
T Consensus 301 ~~~ 303 (307)
T cd05098 301 ALT 303 (307)
T ss_pred HHh
Confidence 764
No 155
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.3e-36 Score=306.18 Aligned_cols=250 Identities=31% Similarity=0.465 Sum_probs=197.1
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.+.|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.+++.++|+||+++++++. .....++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 77 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLYI 77 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeEE
Confidence 357889999999999999999986 88999999865433 4678899999999999999999999864 3456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~ 150 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAK 150 (256)
T ss_pred EEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccc
Confidence 9999999999999975431 2489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
...... ....++..|+|||++.+..++.++||||+|+++|++++ |+.||...... .........++..
T Consensus 151 ~~~~~~---------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~ 219 (256)
T cd05039 151 EASQGQ---------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEKGYRME 219 (256)
T ss_pred cccccc---------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhcCCCCC
Confidence 653211 11224567999999988889999999999999999997 99998543211 1111111111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
.....+ ..+.+++.+||..+|++|||++|++++|+.
T Consensus 220 ~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCP----------------------PEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCC----------------------HHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 111111 112237778999999999999999999975
No 156
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.3e-36 Score=306.87 Aligned_cols=254 Identities=26% Similarity=0.393 Sum_probs=197.8
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.+.|++.++||+|+||.||+|..++++.||+|.+.... .....+.+|+.++++++|||++++++++. ....++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPIYI 77 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCcEE
Confidence 45788999999999999999998889999999986433 33567889999999999999999998742 234699
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
+|||+++++|.+++.... +..+++.++..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 78 ITEYMENGSLVDFLKTPE----GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred EEEcCCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCccee
Confidence 999999999999986543 23489999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
....... .......++..|+|||++.+..++.++||||||+++||+++ |+.||...... ..........+..
T Consensus 151 ~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~ 223 (260)
T cd05067 151 LIEDNEY-----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYRMP 223 (260)
T ss_pred ecCCCCc-----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCCCC
Confidence 6532111 11122335678999999988889999999999999999999 99998643211 1111111111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
..... ...+.+++.+||+.+|++|||++++.+.|+.
T Consensus 224 ~~~~~----------------------~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 RPDNC----------------------PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCC----------------------CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 11111 1112337778999999999999999999874
No 157
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.6e-36 Score=318.01 Aligned_cols=242 Identities=26% Similarity=0.319 Sum_probs=187.2
Q ss_pred CccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+.. ++.||+|+++.. .......+.+|.++++.+ +||||+++++++. ..+.+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-----~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-----TKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 469999999999999764 789999998753 233456677899999887 7999999999853 455789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 9999999999887543 389999999999999999999999 9999999999999999999999999998642
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
... ........|+..|+|||++.+..++.++||||+||++|+|++|+.||...... .....+....+ ..+.
T Consensus 147 ~~~------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~~~~i~~~~~-~~~~ 217 (318)
T cd05570 147 ILG------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--ELFQSILEDEV-RYPR 217 (318)
T ss_pred CcC------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HHHHHHHcCCC-CCCC
Confidence 111 11123346899999999999999999999999999999999999999643211 11111100000 0000
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCH-----HHHHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDI-----REALRR 747 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~-----~evl~~ 747 (767)
.+ ...+.+++.+||+.||++|||+ .+++++
T Consensus 218 ~~----------------------~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 218 WL----------------------SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred cC----------------------CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 01 1112237778999999999999 888764
No 158
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2e-36 Score=322.90 Aligned_cols=204 Identities=25% Similarity=0.309 Sum_probs=170.3
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-ccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKN 527 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 527 (767)
...++|++.+.||+|+||.||+|.+. .++.||+|.+... .....+.+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 35679999999999999999999965 4889999998643 2233467788999999999999999999875432 223
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....++||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ ||+||||||+||+++.++.+||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 3467999999975 77776642 278899999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|||+++...... ......||..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 162 Dfg~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 162 DFGLARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred eCcccccCCCcc-------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999997543221 112346899999999999989999999999999999999999999653
No 159
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.1e-36 Score=320.26 Aligned_cols=193 Identities=33% Similarity=0.448 Sum_probs=161.0
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHH-HHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECE-ALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+. +|+.||+|++.... ....+.+..|.. +++.++||||+++++++ ......++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 46899999999999975 58999999986432 222344555555 45778999999999885 3456779999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 9999999999987543 389999999999999999999999 9999999999999999999999999998643
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 198 (323)
T cd05575 147 IEH------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (323)
T ss_pred ccC------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCC
Confidence 211 1112345689999999999999999999999999999999999999965
No 160
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-36 Score=313.94 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=196.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.+|++.+.||.|++|.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++. .....++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence 46899999999999999999964 58999999997665556678889999999999999999999854 4557799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
|+||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTET-------CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 99999999999998643 289999999999999999999999 99999999999999999999999999987
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc-c
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK-N 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~ 692 (767)
....... ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||........ .........+. .
T Consensus 164 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~~~~~~~~~~ 236 (296)
T cd06655 164 QITPEQS------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGTPELQ 236 (296)
T ss_pred hcccccc------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCcccC
Confidence 6533211 11234578899999999988899999999999999999999999865322111 00000000000 0
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... +...+.+++.+||..||++|||+.+++++
T Consensus 237 ~~~~----------------------~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 237 NPEK----------------------LSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred Cccc----------------------CCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000 11122236778999999999999999864
No 161
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.4e-37 Score=322.07 Aligned_cols=196 Identities=33% Similarity=0.450 Sum_probs=169.0
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCC-C-----CCceeEEeeeecCCcccc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTR-H-----RNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 528 (767)
+|.+.+.||+|+||.|-+|.+. +++.||||+++.. ..-..+...|+.+|..++ | -|+|+++++ |...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~-----F~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY-----FYFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec-----cccc
Confidence 8999999999999999999965 4999999999743 334466778999999986 3 489999999 5567
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC--CceEE
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED--MTAKV 606 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~--~~~kl 606 (767)
++.|||+|.++. +|+++++..+. .+++...+..++.||+.||.+||+. +|||+||||+|||+.+. ..+||
T Consensus 261 ~HlciVfELL~~-NLYellK~n~f----~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 261 NHLCIVFELLST-NLYELLKNNKF----RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cceeeeehhhhh-hHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 788999999965 99999988763 4599999999999999999999999 99999999999999754 37999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+|||.|+....... ....+..|+|||++.+.+|+.+.||||||||++||++|.+.|...
T Consensus 333 IDFGSSc~~~q~vy---------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 333 IDFGSSCFESQRVY---------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EecccccccCCcce---------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 99999987644322 345678899999999999999999999999999999998777554
No 162
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.9e-36 Score=318.44 Aligned_cols=193 Identities=29% Similarity=0.377 Sum_probs=164.2
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++.++ +||+|+++++++ .....+++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 46999999999999975 47899999997542 23445678899999888 699999999985 3456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999886543 399999999999999999999999 9999999999999999999999999998642
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
... ........||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 147 LGP------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred cCC------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 211 1112345689999999999999999999999999999999999999964
No 163
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.9e-37 Score=327.15 Aligned_cols=207 Identities=24% Similarity=0.326 Sum_probs=173.7
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeec
Q 004218 447 YDELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSS 522 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 522 (767)
..++....++|++.+.||+|+||.||+|.+. +++.||+|++... .....+.+.+|+.+++.++||||+++++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 3445556789999999999999999999976 4889999998642 223345677899999999999999999985
Q ss_pred CCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 004218 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM 602 (767)
Q Consensus 523 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 602 (767)
..+...++||||+++|+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCC
Confidence 45567899999999999999986533 88889999999999999999999 999999999999999999
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC----CCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK----PSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.+||+|||+++....... .......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..
T Consensus 180 ~ikL~DfG~a~~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 180 HLKLADFGTCMKMNKEGM-----VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred CEEEEeCCceeEcCcCCc-----ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999999976532111 1113456899999999987543 78899999999999999999999965
No 164
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.7e-36 Score=313.90 Aligned_cols=259 Identities=22% Similarity=0.380 Sum_probs=197.4
Q ss_pred hcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDF 525 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 525 (767)
.++|.+.+.||+|+||.||+|... .+..||+|.++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~---- 109 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT---- 109 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe----
Confidence 357899999999999999999742 25579999886443 23346788999999999 7999999999864
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
..+..++||||+++|+|.+++.... ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++
T Consensus 110 -~~~~~~lv~e~~~~~~L~~~i~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 110 -IGGPILVITEYCCYGDLLNFLRRKR----ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred -cCCceEEEEEcCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEE
Confidence 3445799999999999999997543 22389999999999999999999998 999999999999999999999
Q ss_pred EccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhH
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 684 (767)
++|||.++........ .......++..|+|||.+.+..++.++||||+|+++|||++ |..||....... .....
T Consensus 182 l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~ 256 (302)
T cd05055 182 ICDFGLARDIMNDSNY----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKL 256 (302)
T ss_pred ECCCcccccccCCCce----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHH
Confidence 9999999765332110 11122345778999999998889999999999999999998 999986532211 11111
Q ss_pred hhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 685 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
.....+.......+ ..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 257 ~~~~~~~~~~~~~~----------------------~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRMAQPEHAP----------------------AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcCCCCCCCC----------------------HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111110000111 1122377789999999999999999999864
No 165
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.3e-36 Score=307.46 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=193.6
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCc---------chhhHHHHHHHHhcCCCCCceeEEeeeecCCc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG---------TWKSFFAECEALRNTRHRNLVKLITSCSSLDF 525 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 525 (767)
+|.+.+.||+|++|.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 4788899999999999999965 4889999988644322 1246788999999999999999999854
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
.....++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 3456799999999999999997643 288999999999999999999998 999999999999999999999
Q ss_pred EccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHh
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 685 (767)
|+|||.++...................|+..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ..... .
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~-~ 224 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-QAIFK-I 224 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-HHHHH-H
Confidence 999999987653221111111122345788999999999888999999999999999999999999653211 00100 0
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
............+ ..+.+++.+||+.||.+||++.|++++
T Consensus 225 ~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 225 GENASPEIPSNIS----------------------SEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred hccCCCcCCcccC----------------------HHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0000000011111 112236678999999999999999863
No 166
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.6e-36 Score=324.59 Aligned_cols=203 Identities=25% Similarity=0.321 Sum_probs=170.3
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-cccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~ 528 (767)
..++|++.+.||+|+||.||+|.+. .++.||||++... .....+.+.+|+.+++.++||||+++++++.... ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999965 4889999998643 2334567889999999999999999999865432 2334
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+++||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 568999999975 78777742 278899999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
||+++...... ......||..|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 170 fG~a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 170 FGLARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCCccccCCCC-------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 99997543211 112346899999999999999999999999999999999999999653
No 167
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.4e-36 Score=310.11 Aligned_cols=274 Identities=27% Similarity=0.371 Sum_probs=198.0
Q ss_pred cCCCCCCccccccceEEEEEEe-----CCCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYL-----REGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
..|++.+.||+|+||.||++.. .++..||+|.++... ....+.+.+|+++++.++|||++++++++.. .+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE---DGG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEec---CCC
Confidence 4578899999999999999984 247889999986443 3345678899999999999999999998753 223
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++++|.+++.... ..+++.++..++.|++.||+|||++ |++||||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECC
Confidence 56799999999999999986542 2389999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
||.++.+...... ........++..|+|||++.+..++.++||||||+++|||++++.|+........ ...
T Consensus 153 fg~~~~~~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~---~~~--- 223 (284)
T cd05079 153 FGLTKAIETDKEY---YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFL---KMI--- 223 (284)
T ss_pred CccccccccCccc---eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhh---hhc---
Confidence 9999865432211 1111234567789999999888899999999999999999998877533211100 000
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
.+.................... .........+.+++.+||+.||++|||++++++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 224 GPTHGQMTVTRLVRVLEEGKRL---PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ccccccccHHHHHHHHHcCccC---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000000000000000000000 00000111233377799999999999999999999875
No 168
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.5e-36 Score=313.43 Aligned_cols=262 Identities=26% Similarity=0.402 Sum_probs=195.2
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-Cc--EEEEEEeecc-CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GI--SVAVKVLDIE-STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 528 (767)
.++|++.+.||+|+||.||+|.++. +. .+|+|.+... .....+.+.+|++++.++ +||||+++++++. .+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CC
Confidence 3578889999999999999999753 54 4577776532 223446788999999999 8999999999954 44
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
+..++||||+++|+|.+++...... .....+++.+++.++.|++.|++|||+. +++||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 5679999999999999999754321 1123589999999999999999999998 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAG 677 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 677 (767)
++++.+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||+| |..||......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 230 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 230 (303)
T ss_pred cCCCcEEeCccccCcccchhh-------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence 999999999999986321110 0111224567999999988889999999999999999998 99998543221
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKI 754 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 754 (767)
.................. . ..+.+++.+||+.+|++||+++++++.++.+...
T Consensus 231 --~~~~~~~~~~~~~~~~~~------------------~----~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 231 --ELYEKLPQGYRLEKPLNC------------------D----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred --HHHHHHhcCCcCCCCCCC------------------C----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111111111000000000 1 1122377799999999999999999999876543
No 169
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.9e-36 Score=310.17 Aligned_cols=261 Identities=26% Similarity=0.392 Sum_probs=195.2
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDF 525 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 525 (767)
..++|++.+.||+|++|.||+|.+.+ +..||+|.+..... .....+.+|+.+++.++|+||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 34679999999999999999999753 56799998864332 234568899999999999999999998643
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC--
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKN-EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-- 602 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-- 602 (767)
....++||||+++++|.+++...+.. .....+++..+..++.||+.|++|||+. +++||||||+||+++.++
T Consensus 81 --~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 81 --RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred --CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCC
Confidence 34458999999999999999765421 1223589999999999999999999999 999999999999998654
Q ss_pred -ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcc
Q 004218 603 -TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680 (767)
Q Consensus 603 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~ 680 (767)
.+||+|||+++......... .......+..|+|||++.+..++.++|||||||++|||++ |+.||...... .
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~ 229 (277)
T cd05036 156 RVAKIADFGMARDIYRASYYR----KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--E 229 (277)
T ss_pred cceEeccCccccccCCcccee----cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 69999999998653221100 0112223567999999988889999999999999999997 99998653221 1
Q ss_pred hhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 681 LVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
....+....+...+..++ ..+.+++.+||+.+|++|||+.|++++|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 230 VMEFVTGGGRLDPPKGCP----------------------GPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHcCCcCCCCCCCC----------------------HHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111111111000000001 11223777899999999999999999985
No 170
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.3e-36 Score=304.38 Aligned_cols=249 Identities=25% Similarity=0.404 Sum_probs=188.2
Q ss_pred ccccccceEEEEEEeC---CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEee
Q 004218 462 LIGSGSFGSVYKGYLR---EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEF 537 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 537 (767)
.||+|+||.||+|.++ .+..||+|+...... ...+.+.+|+.++++++||||+++++++.. ...++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 3899999999999864 355799999865432 234568899999999999999999998632 346899999
Q ss_pred cCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhh
Q 004218 538 LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617 (767)
Q Consensus 538 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 617 (767)
+++++|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+||+|||.+.....
T Consensus 76 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKK-----DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 99999999987533 2389999999999999999999998 999999999999999999999999999975433
Q ss_pred hcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhh
Q 004218 618 RIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQV 696 (767)
Q Consensus 618 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (767)
...... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+....+...+..
T Consensus 148 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 222 (257)
T cd05115 148 DDSYYK---ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGKRLDCPAE 222 (257)
T ss_pred Ccccee---ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCCCCCCCCC
Confidence 211110 1111223578999999988889999999999999999996 99998654221 11111111111111111
Q ss_pred ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 697 LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 697 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
..+. +.+++.+||..||++||++.++.+.|+.+
T Consensus 223 ~~~~----------------------l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPE----------------------MYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHH----------------------HHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1111 12266789999999999999999999764
No 171
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=4.5e-36 Score=305.76 Aligned_cols=253 Identities=27% Similarity=0.418 Sum_probs=195.7
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
++|.+.+.||+|++|.||+|.+..+..||+|.+.... ...+.+.+|++++++++|||++++++++. ....++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~v 78 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYIV 78 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEEE
Confidence 5688999999999999999998777789999875432 33467889999999999999999998753 2346899
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+..
T Consensus 79 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~ 151 (260)
T cd05069 79 TEFMGKGSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARL 151 (260)
T ss_pred EEcCCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceE
Confidence 99999999999997543 23488999999999999999999998 999999999999999999999999999976
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......++..|+|||...+..++.++||||||+++|+|++ |+.||...... .........++...
T Consensus 152 ~~~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~ 224 (260)
T cd05069 152 IEDNEYT-----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYRMPC 224 (260)
T ss_pred ccCCccc-----ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC
Confidence 5322110 1112235678999999988889999999999999999999 88998653221 11111111111110
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
... ....+.+++.+||+.||++||+++++++.|++
T Consensus 225 ~~~----------------------~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQG----------------------CPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred Ccc----------------------cCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000 11123337778999999999999999999874
No 172
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-38 Score=317.18 Aligned_cols=245 Identities=28% Similarity=0.363 Sum_probs=192.7
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|.-.+.||.|+||.||-|++. +.+.||||.+... +.+.|+++.+|+++|++++|||++.+-|+|. .....
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchH
Confidence 3555678999999999999954 5889999999644 4456889999999999999999999999854 34556
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
|+|||||- |+-.|++.-.+ .++-+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.|||+|||.
T Consensus 102 WLVMEYCl-GSAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 102 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred HHHHHHHh-ccHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccc
Confidence 99999995 49899887665 3489999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|....+. ..++||+.|||||++. .+.|+-++||||+|++..|+...++|+.....-. .+...+...
T Consensus 173 Asi~~PA----------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNe 241 (948)
T KOG0577|consen 173 ASIMAPA----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE 241 (948)
T ss_pred hhhcCch----------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcC
Confidence 9765432 4578999999999875 5789999999999999999999999975432110 011111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.|.- -... ..+.+. +++..||++-|.+|||+++++++
T Consensus 242 sPtL----qs~e--------------WS~~F~----~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 SPTL----QSNE--------------WSDYFR----NFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCC----CCch--------------hHHHHH----HHHHHHHhhCcccCCcHHHHhhc
Confidence 1110 0111 122222 25568999999999999998875
No 173
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.6e-36 Score=318.94 Aligned_cols=199 Identities=26% Similarity=0.371 Sum_probs=167.0
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCccccee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 530 (767)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|..++... +|++|+++++++ ...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 4788899999999999999976 47899999986532 22344567788888777 588999998885 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 899999999999999986543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+++..... ........||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 147 ~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~ 204 (323)
T cd05616 147 MCKENMWD------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 204 (323)
T ss_pred CceecCCC------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCC
Confidence 98643211 11123456899999999999999999999999999999999999999653
No 174
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.3e-36 Score=310.24 Aligned_cols=260 Identities=24% Similarity=0.350 Sum_probs=196.8
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCc----EEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGI----SVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
..+|++.+.||+|+||.||+|.+. +++ +||+|++.... ....+.+.+|+.+++.+.||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 357888999999999999999854 344 58999986432 2345678899999999999999999998753
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
...+++|||+++|+|.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 23579999999999999997543 2389999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVE 686 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 686 (767)
|||+++......... ......++..|+|||...+..++.++|||||||++|||++ |..||...... ....++.
T Consensus 152 dfG~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~ 225 (279)
T cd05109 152 DFGLARLLDIDETEY----HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLE 225 (279)
T ss_pred CCCceeeccccccee----ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH
Confidence 999997653221110 0111234678999999988889999999999999999998 88998653221 1112221
Q ss_pred hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
............. .+.+++.+||+.||++||++.|+++.++.+..+.
T Consensus 226 ~~~~~~~~~~~~~----------------------~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 226 KGERLPQPPICTI----------------------DVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCCcCCCCccCCH----------------------HHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 1111110111111 1223777899999999999999999998775543
No 175
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3e-36 Score=310.52 Aligned_cols=259 Identities=27% Similarity=0.412 Sum_probs=196.3
Q ss_pred cCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|...++||+|+||.||++... ++..+|+|.+........+.+.+|+++++.++|+||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----EG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----cC
Confidence 46788899999999999999742 35679999887555555678999999999999999999999854 34
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN---------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~ 599 (767)
...++||||+++++|.+++...... .....+++..+..++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 5579999999999999999764321 1113489999999999999999999998 999999999999999
Q ss_pred CCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCC
Q 004218 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGE 678 (767)
Q Consensus 600 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~ 678 (767)
+++.+||+|||++........ ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 232 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDY----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE 232 (280)
T ss_pred CCCCEEECCCCceeEcCCCce----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence 999999999999875432110 011122335678999999998899999999999999999998 899985432211
Q ss_pred cchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 679 VSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.........+......+++ .+.+++.+||+.||.+||+++|+.+.|+
T Consensus 233 --~~~~~~~~~~~~~~~~~~~----------------------~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 233 --AIECITQGRELERPRTCPP----------------------EVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --HHHHHHcCccCCCCCCCCH----------------------HHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111111001000111111 1223777899999999999999999886
No 176
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.3e-36 Score=310.44 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=196.3
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcc-cc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFK-NM 528 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~-~~ 528 (767)
.+++.|++.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|||++++++++...... ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45678999999999999999999965 48899999986543 3446788999999998 799999999997653322 23
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++++|.+++.... ...+++..+..++.|++.|++|||++ +|+||||||+||++++++.++|+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 56899999999999999987643 23489999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
||++........ ......|+..|+|||++. +..++.++||||+||++|||++|+.||......... .
T Consensus 155 fg~~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~--~ 226 (272)
T cd06637 155 FGVSAQLDRTVG------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL--F 226 (272)
T ss_pred CCCceecccccc------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH--H
Confidence 999875432211 123356889999999876 335788999999999999999999998543211100 0
Q ss_pred HhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 684 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
....... ..... .... ..+.+++.+||..||.+|||+.|++++
T Consensus 227 ~~~~~~~---~~~~~--------------~~~~----~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 227 LIPRNPA---PRLKS--------------KKWS----KKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HHhcCCC---CCCCC--------------CCcC----HHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0000000 00000 0001 112337779999999999999999864
No 177
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.8e-36 Score=310.13 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=194.3
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++. .....+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLW 82 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEE
Confidence 357888899999999999999965 58899999987655555567889999999999999999999853 456679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... .+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 83 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 153 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVS 153 (267)
T ss_pred EEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceee
Confidence 9999999999999986543 389999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
....... .......|+..|+|||++. ...++.++||||+||++|+|++|+.||........ ........+
T Consensus 154 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~ 226 (267)
T cd06645 154 AQITATI------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNF 226 (267)
T ss_pred eEccCcc------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCC
Confidence 7543221 1122346889999999874 45578899999999999999999999855332111 111111111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... .. . .....+ .+.+++.+||+.+|++|||+++++++
T Consensus 227 ~~~~---~~----~--------~~~~~~----~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 227 QPPK---LK----D--------KMKWSN----SFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCc---cc----c--------cCCCCH----HHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0000 00 0 000011 12237778999999999999999864
No 178
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.6e-36 Score=314.58 Aligned_cols=203 Identities=25% Similarity=0.352 Sum_probs=162.6
Q ss_pred CCccccccceEEEEEEeC---CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 460 ENLIGSGSFGSVYKGYLR---EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
.++||+|+||.||+|... +++.||+|.+... .....+.+|++++++++||||+++++++.. ..+..+++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 468999999999999965 4678999988633 233567899999999999999999998653 23456899999
Q ss_pred ecCCCChhhhhcccCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee----CCCCceEEccc
Q 004218 537 FLGNGSLGDWIHGERKN---EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL----DEDMTAKVGDF 609 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~----~~~~~~kl~Df 609 (767)
|+++ +|.+++...... .....+++..+..++.|++.||+|||++ +|+||||||+||++ +..+.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9864 898887643221 1123589999999999999999999999 99999999999999 45678999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|+++....... .........||+.|+|||++.+. .++.++||||+||++|+|++|++||...
T Consensus 157 G~a~~~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK---PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc---cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99976543211 11122345689999999998764 5799999999999999999999999654
No 179
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.8e-36 Score=308.09 Aligned_cols=259 Identities=25% Similarity=0.422 Sum_probs=195.5
Q ss_pred cCCCCCCccccccceEEEEEEeCC-C---cEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-G---ISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+.|++.+.||+|+||.||+|.+.. + ..||+|.+... .....+.+..|+.+++.++||||+++++++. .+.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-----CCC
Confidence 457889999999999999999653 3 36999998654 2334567899999999999999999999853 455
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++|+|.+++.... ..+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+||+||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 6799999999999999987543 2389999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|.+............ ........+..|+|||.+.+..++.++||||+|+++||+++ |..||...... .....+...
T Consensus 151 g~~~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~ 227 (269)
T cd05065 151 GLSRFLEDDTSDPTY-TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQD 227 (269)
T ss_pred ccccccccCcccccc-ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcC
Confidence 998765432211111 00011112457999999998899999999999999999886 99998553211 122222111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
.+.......+ ..+.+++.+||+.+|++||++.+++..|+++
T Consensus 228 ~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPPMDCP----------------------TALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCcccCC----------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111111011 1122377789999999999999999998764
No 180
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.6e-36 Score=321.05 Aligned_cols=266 Identities=24% Similarity=0.386 Sum_probs=198.6
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCC-CCCceeEEeeeecC
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNTR-HRNLVKLITSCSSL 523 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~ 523 (767)
...++|.+.+.||+|+||.||+|.++ .++.||+|++.... ....+.+.+|++++.++. ||||++++++|..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~- 112 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK- 112 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-
Confidence 34457888999999999999999864 24689999996442 223457889999999997 9999999999643
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccCCC--------------------------------------------------
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGERKN-------------------------------------------------- 553 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 553 (767)
....++||||+++|+|.++++..+..
T Consensus 113 ----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 113 ----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred ----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 34679999999999999999754310
Q ss_pred ------------------------------------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC
Q 004218 554 ------------------------------------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL 591 (767)
Q Consensus 554 ------------------------------------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 591 (767)
.....+++..+..++.|++.||+|||+. +++||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdl 265 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDL 265 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccC
Confidence 0113478888999999999999999998 9999999
Q ss_pred CCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCC
Q 004218 592 KPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670 (767)
Q Consensus 592 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p 670 (767)
||+||++++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.|
T Consensus 266 kp~NiLl~~~~~~kL~DfGla~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P 341 (401)
T cd05107 266 AARNVLICEGKLVKICDFGLARDIMRDSNY----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341 (401)
T ss_pred CcceEEEeCCCEEEEEecCcceeccccccc----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999765332111 01122346788999999988889999999999999999998 8889
Q ss_pred CCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
|........ ....+....+...+..+. ..+.+++.+||..+|.+||+++|+++.|+.
T Consensus 342 ~~~~~~~~~-~~~~~~~~~~~~~p~~~~----------------------~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 342 YPELPMNEQ-FYNAIKRGYRMAKPAHAS----------------------DEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred CCCCCchHH-HHHHHHcCCCCCCCCCCC----------------------HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 854321111 111111111100010111 112236778999999999999999999987
Q ss_pred HH
Q 004218 751 AQ 752 (767)
Q Consensus 751 ~~ 752 (767)
+.
T Consensus 399 ~~ 400 (401)
T cd05107 399 LL 400 (401)
T ss_pred Hh
Confidence 63
No 181
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=9.3e-37 Score=320.07 Aligned_cols=193 Identities=31% Similarity=0.410 Sum_probs=164.6
Q ss_pred CccccccceEEEEEEe----CCCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 461 NLIGSGSFGSVYKGYL----REGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
+.||+|+||.||+++. .+|+.||+|++.... ......+.+|++++++++||||+++++++. .+...|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-----TEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCEEEEE
Confidence 5799999999999985 247899999996532 223456778999999999999999999853 45678999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999986543 389999999999999999999999 999999999999999999999999999875
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 148 ~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 200 (318)
T cd05582 148 SIDHE------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG 200 (318)
T ss_pred cCCCC------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCC
Confidence 43221 112335689999999999988899999999999999999999999965
No 182
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=7.3e-36 Score=303.73 Aligned_cols=249 Identities=30% Similarity=0.390 Sum_probs=191.2
Q ss_pred CccccccceEEEEEEeCC----CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE----GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+.. +..||+|.+..... ...+++.+|+++++.+.|||++++++++. ....++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 469999999999998542 36899999864433 34567889999999999999999999853 23468999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999997644 389999999999999999999998 9999999999999999999999999999865
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
....... .......++..|+|||...+..++.++||||||+++|+|++ |+.||..... ......+....+....
T Consensus 146 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~ 220 (257)
T cd05060 146 GAGSDYY---RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGERLPRP 220 (257)
T ss_pred ecCCccc---ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCcCCCC
Confidence 4322111 01111223567999999998899999999999999999998 9999865322 1222222211111111
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
..++ ..+.+++.+||..+|++|||+.++++.|+++
T Consensus 221 ~~~~----------------------~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 221 EECP----------------------QEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCC----------------------HHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 1111 1222377799999999999999999999875
No 183
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.7e-36 Score=306.96 Aligned_cols=257 Identities=26% Similarity=0.413 Sum_probs=195.9
Q ss_pred cCCCCCCccccccceEEEEEEeC----CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
.+|++.+.||+|+||.||+|.+. .+..||+|.++... ....+.+.+|+.++++++||||+++++++. .++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCC
Confidence 57889999999999999999864 23479999886432 233467889999999999999999999854 445
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+||
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 6799999999999999997543 2389999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|.+.......... .......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+...
T Consensus 151 g~~~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~ 225 (267)
T cd05066 151 GLSRVLEDDPEAA---YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEG 225 (267)
T ss_pred Cccccccccccee---eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCC
Confidence 9998654321111 01111223567999999998889999999999999999886 99998653221 111111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
.+.......+ ..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 226 ~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 YRLPAPMDCP----------------------AALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CcCCCCCCCC----------------------HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 1110000001 1122377789999999999999999999764
No 184
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.5e-36 Score=307.36 Aligned_cols=258 Identities=22% Similarity=0.320 Sum_probs=193.3
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+.+++++.....||+|+||.||+|.+. ++..||+|.+........+.+.+|+++++.++|+||+++++++. .++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----ENG 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----cCC
Confidence 445666767788999999999999965 47889999987655556678899999999999999999999854 446
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-CCceEEcc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE-DMTAKVGD 608 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~kl~D 608 (767)
..++|+||+++++|.+++...... ...++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEec
Confidence 679999999999999999754211 1127888899999999999999998 9999999999999986 67999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCC--CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK--PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE 686 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 686 (767)
||.+........ ......|+..|+|||++.+.. ++.++||||+|+++|+|++|+.||...............
T Consensus 153 fg~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~ 226 (268)
T cd06624 153 FGTSKRLAGINP------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM 226 (268)
T ss_pred chhheecccCCC------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh
Confidence 999875532111 112234788999999986543 788999999999999999999998643221111100000
Q ss_pred hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.......+..++ ..+.+++.+||+.+|++|||+.|++++
T Consensus 227 ~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 227 FKIHPEIPESLS----------------------AEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred hccCCCCCcccC----------------------HHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 000000111111 112236778999999999999999864
No 185
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.9e-36 Score=312.90 Aligned_cols=267 Identities=23% Similarity=0.386 Sum_probs=199.9
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC--------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeee
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR--------EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCS 521 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 521 (767)
....+|++.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 33567889999999999999999742 24579999886432 33456788999999999 8999999999864
Q ss_pred cCCcccceeeEEEEeecCCCChhhhhcccCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC
Q 004218 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE----------HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL 591 (767)
Q Consensus 522 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 591 (767)
.....++||||+++|+|.+++...+... ....+++.++..++.|++.||+|||++ +++||||
T Consensus 92 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dl 163 (304)
T cd05101 92 -----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDL 163 (304)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence 3456799999999999999997643211 123588999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCC
Q 004218 592 KPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670 (767)
Q Consensus 592 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p 670 (767)
||+||++++++.+||+|||.++........ .......++..|+|||++.+..++.++||||||+++|+|++ |..|
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 239 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDYY----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 239 (304)
T ss_pred ccceEEEcCCCcEEECCCccceeccccccc----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999999765332111 11122335678999999988889999999999999999998 7788
Q ss_pred CCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
|...... .....+....+...... ....+.+++.+||+.+|++|||+.|+++.|++
T Consensus 240 ~~~~~~~--~~~~~~~~~~~~~~~~~----------------------~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 240 YPGIPVE--ELFKLLKEGHRMDKPAN----------------------CTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred cccCCHH--HHHHHHHcCCcCCCCCC----------------------CCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 7542111 11111111110000000 01112237778999999999999999999988
Q ss_pred HHHH
Q 004218 751 AQKI 754 (767)
Q Consensus 751 ~~~~ 754 (767)
+...
T Consensus 296 ~~~~ 299 (304)
T cd05101 296 ILTL 299 (304)
T ss_pred HHHh
Confidence 7654
No 186
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6e-37 Score=323.50 Aligned_cols=202 Identities=26% Similarity=0.327 Sum_probs=170.5
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+.+++.++||||+++++++ .+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 46889999999999999999975 58899999986532 23456688899999999999999999885 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 899999999999999997652 2389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccC------CCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL------GEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++......... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 148 ~a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 212 (330)
T cd05601 148 SAARLTANKMV-----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEG 212 (330)
T ss_pred CCeECCCCCce-----eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCC
Confidence 99765332111 112346899999999986 456788999999999999999999999653
No 187
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.4e-36 Score=315.96 Aligned_cols=271 Identities=23% Similarity=0.285 Sum_probs=193.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|.+.+.||+|+||.||+|..+ +++.||+|.++.... .....+.+|++++++++||||+++++++. .++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 57899999999999999999976 478899999865432 23456778999999999999999999854 445679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 81 lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCCC-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 99999975 8888876543 2388999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... ......++..|+|||++.+ ..++.++||||+||++|+|++|+.||......+. ...+......
T Consensus 152 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~--~~~~~~~~~~ 223 (309)
T cd07872 152 RAKSVPTK------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE--LHLIFRLLGT 223 (309)
T ss_pred eecCCCcc------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCC
Confidence 75422111 1122357889999998765 4578999999999999999999999965432211 1111100000
Q ss_pred ---c-hhhhccHHHHHhhhcc---hhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 ---N-AQQVLDRELRQLMMSS---ESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ---~-~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. ........-....... +.........+...+.+++.+|++.||.+|||++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 224 PTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred CCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0 0000000000000000 000000111122223347789999999999999999874
No 188
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5e-36 Score=308.68 Aligned_cols=248 Identities=23% Similarity=0.347 Sum_probs=189.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
+|++.+.||+|+||.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++. .+...++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 76 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFF-----VENRISI 76 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----ECCEEEE
Confidence 5788899999999999999964 58899999986542 233467889999999999999999999964 3456789
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||++.
T Consensus 77 v~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~ 143 (279)
T cd06619 77 CTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVST 143 (279)
T ss_pred EEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence 99999999997652 178888999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcch--hhHhhhhccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL--VKWVESNFPK 691 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~ 691 (767)
..... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||.......... ..........
T Consensus 144 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 215 (279)
T cd06619 144 QLVNS--------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDE 215 (279)
T ss_pred ecccc--------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhcc
Confidence 54321 1123468899999999998889999999999999999999999986533221110 0000000000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... . ...... ..+.+++.+||+.||++||+++|++++
T Consensus 216 ~~~~---------~-----~~~~~~----~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 216 DPPV---------L-----PVGQFS----EKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCC---------C-----CCCcCC----HHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0000 0 000001 112237778999999999999999876
No 189
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=3.8e-36 Score=309.62 Aligned_cols=260 Identities=24% Similarity=0.341 Sum_probs=197.6
Q ss_pred hcCCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
.++|++.+.||+|+||.||+|.... +..||+|.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 4578899999999999999998652 4689999985432 233457889999999999999999999954
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNE----HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM 602 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 602 (767)
.+...++||||+++|+|.+++....... ....+++..+..++.|++.||+|||+. +++||||||+||+++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 3456799999999999999997543211 123478999999999999999999998 999999999999999999
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcch
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSL 681 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~ 681 (767)
.+||+|||.++......... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||..... ...
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~ 230 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYYR----KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEV 230 (277)
T ss_pred CEEECCcccchhhccCcccc----cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHH
Confidence 99999999997654322111 1123346788999999988889999999999999999998 8899854321 111
Q ss_pred hhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 682 VKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.+..........+...+ ..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 231 LKFVIDGGHLDLPENCP----------------------DKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHhcCCCCCCCCCCC----------------------HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 12221111111111111 11223777899999999999999999885
No 190
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-37 Score=305.63 Aligned_cols=249 Identities=27% Similarity=0.373 Sum_probs=200.7
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.+=|...+.||+|-|+.|-+|++- +|++||||++++..- -....+.+|++.|+-++|||||++|++ ......
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQTK 91 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQTK 91 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccce
Confidence 456888899999999999999843 699999999976533 345678899999999999999999998 566778
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCceEEccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD-EDMTAKVGDF 609 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~~kl~Df 609 (767)
+|+|.|.-++|+|++|+-+.. .++.+.-+.+++.||+.|+.|+|+. .+|||||||+||.+- .-|-+||+||
T Consensus 92 lyLiLELGD~GDl~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDF 163 (864)
T KOG4717|consen 92 LYLILELGDGGDLFDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDF 163 (864)
T ss_pred EEEEEEecCCchHHHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeec
Confidence 899999999999999998764 3499999999999999999999999 999999999999775 6789999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCC-CcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPS-TAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|++-.+.+. ......+|+..|.|||++.+..|+ +++||||+|||+|.+++|++||+.....+. +-..+.-.
T Consensus 164 GFSNkf~PG-------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-LTmImDCK 235 (864)
T KOG4717|consen 164 GFSNKFQPG-------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-LTMIMDCK 235 (864)
T ss_pred cccccCCCc-------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-hhhhhccc
Confidence 999765432 233567899999999999999884 689999999999999999999987544332 11111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
| ..+..+. .-.+++|.+||..||++|.+.+||...
T Consensus 236 Y--tvPshvS----------------------~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 236 Y--TVPSHVS----------------------KECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred c--cCchhhh----------------------HHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 1 1122222 223346778999999999999998753
No 191
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.3e-36 Score=319.65 Aligned_cols=275 Identities=21% Similarity=0.273 Sum_probs=196.2
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-ccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKN 527 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 527 (767)
...++|++.+.||+|+||.||+|.+. +++.||||.+.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 44678999999999999999999965 58899999986432 223456778999999999999999999864322 122
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....++++|++ +++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~ 160 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRIL 160 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEc
Confidence 34578999988 67999888643 289999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE 686 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 686 (767)
|||+++..... .....||..|+|||++.+ ..++.++||||+||++|+|++|+.||...... ..+.....
T Consensus 161 Dfg~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~ 230 (343)
T cd07878 161 DFGLARQADDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIME 230 (343)
T ss_pred CCccceecCCC---------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Confidence 99999754321 123458999999999876 56889999999999999999999999653211 11111111
Q ss_pred hh--cccc-hhhhccHHHHHhhhcc---hh-hHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 687 SN--FPKN-AQQVLDRELRQLMMSS---ES-QTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 687 ~~--~~~~-~~~~~~~~l~~~~~~~---~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. .+.. ................ +. ............+.+++.+|++.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 231 VVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0000 0111111111111000 00 0000001111223448889999999999999999976
No 192
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.9e-36 Score=305.42 Aligned_cols=250 Identities=23% Similarity=0.275 Sum_probs=194.7
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
+|++.+.||+|+||.||++.+. +++.||+|.++.. .....+.+.+|+.+++.++|||++++++.+ ..+...++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 4788899999999999999975 5889999998643 234456788999999999999999999985 45567899
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++|+|.+++.... ...+++..+..++.|++.|+.|||++ +|+|+||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 999999999999886533 23478999999999999999999999 99999999999999999999999999987
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||....... .............
T Consensus 149 ~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~ 220 (255)
T cd08219 149 LLTSPGA------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN--LILKVCQGSYKPL 220 (255)
T ss_pred eeccccc------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH--HHHHHhcCCCCCC
Confidence 5532211 1123458889999999998889999999999999999999999996532111 1111100000000
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+..++ ..+.+++.+||+.||++|||+.|++..
T Consensus 221 ~~~~~----------------------~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYS----------------------YELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccC----------------------HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01111 112337778999999999999999864
No 193
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.8e-36 Score=311.82 Aligned_cols=270 Identities=26% Similarity=0.299 Sum_probs=203.2
Q ss_pred ccCHHHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeee
Q 004218 444 MISYDELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCS 521 (767)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 521 (767)
.+..+++..++++|++.+.||+|+||.||+|... +++.||+|++.... .....+.+|+.+++++ +|||++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 4555667778899999999999999999999975 58899999985432 2345677899999998 8999999999987
Q ss_pred cCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 004218 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED 601 (767)
Q Consensus 522 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 601 (767)
..+.......++||||+++|+|.++++.... ....+++..++.++.|++.||+|||+. +++||||||+||+++.+
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 5443445678999999999999998864321 123489999999999999999999998 99999999999999999
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC-----CCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-----PSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
+.+||+|||.+......... .....|+..|+|||.+.... ++.++||||+||++|||++|+.||.....
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~ 238 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLR------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP 238 (291)
T ss_pred CCEEEeecccchhccccccc------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH
Confidence 99999999998765332111 12245788999999876433 68899999999999999999999865321
Q ss_pred CCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 677 GEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. ...........+ .. .. .+.....+.+++.+||+.+|++||++.|++++
T Consensus 239 ~-~~~~~~~~~~~~-~~---~~-----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 239 V-KTLFKIPRNPPP-TL---LH-----------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H-HHHHHHhcCCCC-CC---Cc-----------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1 111111100000 00 00 00011123347789999999999999999874
No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.2e-36 Score=309.94 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=191.1
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
|++.+.||+|+||.||+|.+.. +..+|+|.+........+.+.+|+++++.++|||++++++++. .+...++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY-----YENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEe-----eCCEEEEEE
Confidence 6778899999999999999764 7788999986555555677889999999999999999999864 345679999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++++|.+++.... .++++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 82 e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 82 EFCAGGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 9999999999876432 2489999999999999999999999 9999999999999999999999999998754
Q ss_pred hhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
..... ......++..|+|||++. +..++.++||||+||++|+|++|+.||....... ..........+
T Consensus 154 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~ 226 (282)
T cd06643 154 TRTIQ------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPP 226 (282)
T ss_pred ccccc------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCC
Confidence 32211 112345889999999874 3456789999999999999999999986532111 11111111000
Q ss_pred cc-hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KN-AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. .+..++ ..+.+++.+||+.||.+|||+.+++++
T Consensus 227 ~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 227 TLAQPSRWS----------------------SEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCCCccccC----------------------HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 000011 112237778999999999999998765
No 195
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=7.2e-36 Score=304.67 Aligned_cols=256 Identities=28% Similarity=0.431 Sum_probs=198.8
Q ss_pred HhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
..++|++.+.||+|+||.||+|..++++.||||.+.... ...+++.+|+.++++++|||++++++++. .....+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 77 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEPIY 77 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCceE
Confidence 346899999999999999999998888899999986432 34567899999999999999999999853 345679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... +..+++.++..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+
T Consensus 78 ~v~e~~~~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred EEEeccCCCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccc
Confidence 9999999999999997643 23489999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
......... ......++..|+|||.+.+..++.++||||+|+++|++++ |+.||...... .........+..
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~ 223 (261)
T cd05034 151 RLIEDDEYT-----AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERGYRM 223 (261)
T ss_pred eeccchhhh-----hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC
Confidence 765432110 1112224568999999998889999999999999999998 99998543211 111111111111
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
..+...+ . .+.+++.+|++.+|++||+++++.+.|+.
T Consensus 224 ~~~~~~~------------------~----~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 PRPPNCP------------------E----ELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCC------------------H----HHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111111 1 12237778999999999999999998874
No 196
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.1e-36 Score=318.20 Aligned_cols=193 Identities=33% Similarity=0.430 Sum_probs=160.0
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHH-HHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECE-ALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|++. +++.||+|++.... ......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 46999999999999976 47889999986432 122334444544 56778999999999985 3456779999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 9999999999997643 378889999999999999999999 9999999999999999999999999998753
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (325)
T cd05602 147 IEHN------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (325)
T ss_pred ccCC------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCC
Confidence 2211 112345689999999999999999999999999999999999999964
No 197
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.6e-36 Score=305.23 Aligned_cols=251 Identities=25% Similarity=0.374 Sum_probs=196.7
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.++|++.+.||+|+||.||+|.+.+ ++.||+|.+..... .+.+.+|++++++++||||+++++++. .+...+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEE
Confidence 3689999999999999999999875 78999999864432 678999999999999999999999854 346679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+++||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 75 l~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~ 146 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVS 146 (256)
T ss_pred EEEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccc
Confidence 9999999999999986533 3489999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......|+..|+|||++.+..++.++||||||+++|+|++|+.||......... .......+..
T Consensus 147 ~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~--~~~~~~~~~~ 218 (256)
T cd06612 147 GQLTDTMA------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI--FMIPNKPPPT 218 (256)
T ss_pred hhcccCcc------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh--hhhccCCCCC
Confidence 86543211 112344788999999998888999999999999999999999998653221110 0000000000
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. ....+...+.+++.+||+.||++|||+.|++++
T Consensus 219 ~~--------------------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 219 LS--------------------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CC--------------------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 00 000011112236778999999999999999863
No 198
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4.4e-36 Score=310.62 Aligned_cols=263 Identities=24% Similarity=0.351 Sum_probs=196.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF 525 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 525 (767)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS---- 79 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 4578999999999999999999754 24579999875332 223446788999999999999999999854
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCC----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKN----EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED 601 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 601 (767)
.....++||||+++|+|.+++...... ......++..+..++.|++.||+|||++ +|+||||||+||+++++
T Consensus 80 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~ 155 (288)
T cd05061 80 -KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHD 155 (288)
T ss_pred -CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCC
Confidence 334569999999999999999754321 1123467788899999999999999999 99999999999999999
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcc
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVS 680 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~ 680 (767)
+.++|+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... .
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~ 229 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--Q 229 (288)
T ss_pred CcEEECcCCccccccccccccc----cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence 9999999999875433211110 112235678999999988889999999999999999998 78888542211 1
Q ss_pred hhhHhh-hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 681 LVKWVE-SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 681 ~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
..+... ...+. .... ....+.+++.+||+.||++|||+.|+++.+++..
T Consensus 230 ~~~~~~~~~~~~-~~~~----------------------~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 230 VLKFVMDGGYLD-QPDN----------------------CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHHcCCCCC-CCCC----------------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 111110 00000 0000 0112333777999999999999999999987653
No 199
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.5e-36 Score=319.47 Aligned_cols=193 Identities=34% Similarity=0.449 Sum_probs=161.1
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHH-HHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECE-ALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|... +|+.||+|++... .......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 46899999999999965 5899999998643 2223345556655 46778999999999885 3456779999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. ||+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999886543 389999999999999999999999 9999999999999999999999999998643
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
... ........||..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (325)
T cd05604 147 IAQ------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYC 198 (325)
T ss_pred CCC------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCC
Confidence 211 1112345689999999999999999999999999999999999999965
No 200
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.1e-36 Score=313.67 Aligned_cols=197 Identities=24% Similarity=0.391 Sum_probs=169.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|+||.||++.+. ++..||+|.+..... ....++.+|++++++++||||+++++++. .++.++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 36889999999999999999965 488899998864422 23456889999999999999999999854 456789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+ . +++||||||+||+++.++.+||+|||.
T Consensus 76 lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGV 146 (308)
T ss_pred EEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhC---CEEECCCChHHEEEecCCcEEEccCCC
Confidence 9999999999999997643 38999999999999999999997 5 899999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+...... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~ 200 (308)
T cd06615 147 SGQLIDS--------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP 200 (308)
T ss_pred ccccccc--------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 8654221 11234688999999999888899999999999999999999999854
No 201
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.6e-36 Score=306.19 Aligned_cols=258 Identities=24% Similarity=0.422 Sum_probs=195.3
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-C---cEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-G---ISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.++|+..+.||+|+||.||+|.... + ..||+|.++... ....+.+.+|++++++++|||++++.+++. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cC
Confidence 3578888999999999999999753 3 379999886442 334567889999999999999999999964 34
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
+..++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 55799999999999999986532 2389999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 687 (767)
||++........... .......+..|+|||++.+..++.++||||||+++||+++ |+.||...... .....+..
T Consensus 151 fg~~~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~~i~~ 225 (268)
T cd05063 151 FGLSRVLEDDPEGTY---TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMKAIND 225 (268)
T ss_pred Cccceecccccccce---eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhc
Confidence 999976543211111 0111223457999999988889999999999999999997 99998543211 11111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
..+....... . .. +.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ~~~~~~~~~~------------------~---~~-~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPAPMDC------------------P---SA-VYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCC------------------C---HH-HHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1110000000 0 11 22377789999999999999999999865
No 202
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1e-35 Score=311.72 Aligned_cols=266 Identities=23% Similarity=0.390 Sum_probs=198.7
Q ss_pred hcCCCCCCccccccceEEEEEEeC--------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecC
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR--------EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSL 523 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 523 (767)
.++|.+.+.||+|+||.||+|... ....||+|.+.... ......+.+|+++++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-- 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc--
Confidence 357889999999999999999752 24579999886432 23456788999999999 6999999999864
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCC
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKP 593 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 593 (767)
.....++||||+++|+|.+++...... .....+++.++..++.|++.||+|||++ |++||||||
T Consensus 89 ---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 89 ---QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 345679999999999999999764321 1124589999999999999999999998 999999999
Q ss_pred CCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCC
Q 004218 594 GNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTH 672 (767)
Q Consensus 594 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 672 (767)
+||++++++.+||+|||.++.......... .....++..|+|||++.+..++.++||||||+++|+|++ |..||.
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~ 238 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYYKK----TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYP 238 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccccc----cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999976533211110 111224467999999988889999999999999999999 888885
Q ss_pred CcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 673 ESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
..... .................+. . .+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 239 ~~~~~--~~~~~~~~~~~~~~~~~~~------------------~----~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 239 GIPVE--ELFKLLREGHRMDKPSNCT------------------H----ELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred CCCHH--HHHHHHHcCCCCCCCCCCC------------------H----HHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 43211 1111111110000000000 1 1223777999999999999999999999887
Q ss_pred HHH
Q 004218 753 KIL 755 (767)
Q Consensus 753 ~~~ 755 (767)
...
T Consensus 295 ~~~ 297 (314)
T cd05099 295 AAV 297 (314)
T ss_pred HHh
Confidence 644
No 203
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.4e-36 Score=309.03 Aligned_cols=252 Identities=26% Similarity=0.345 Sum_probs=191.5
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|+..+.||+|+||.||++.+. +++.||+|.+..... ...+.+.+|+.++++++|++++++++.+. .+...
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEE
Confidence 3677889999999999999976 588999998864322 22345778999999999999999999854 44567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++++|.+++.... ...+++.++..++.|++.||.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMG----EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccc
Confidence 99999999999999886433 23489999999999999999999998 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||........ . .....
T Consensus 149 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~-~~~~~---- 215 (285)
T cd05630 149 AVHVPEGQ-------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-R-EEVER---- 215 (285)
T ss_pred eeecCCCc-------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-H-HHHHh----
Confidence 86542211 11224589999999999998999999999999999999999999965322110 0 00000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC-----HHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID-----IREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-----~~evl~~ 747 (767)
... ...... .......+.+++.+||+.||++||| ++|++++
T Consensus 216 ----~~~-~~~~~~----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 216 ----LVK-EVQEEY----------SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ----hhh-hhhhhc----------CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 000 000000 0001111233777899999999999 8898874
No 204
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.8e-36 Score=309.77 Aligned_cols=259 Identities=22% Similarity=0.351 Sum_probs=193.5
Q ss_pred CCCCCCccccccceEEEEEEeCC------CcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.|++.+.||+|+||.||+|.+.+ ++.||+|++...... ..+.+.+|+.+++.++||||+++++++. ..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~ 80 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-----KE 80 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----CC
Confidence 46778899999999999998632 578999998644322 2456889999999999999999999964 33
Q ss_pred eeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
...++++||+++++|.+++...... .....+++..+..++.|++.||+|+|++ +|+||||||+||++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 4569999999999999998532210 1123488999999999999999999999 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAG 677 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 677 (767)
++++.+||+|||+++........ .......+++.|+|||.+.+..++.++||||+||++|||++ |..||......
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 233 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADYY----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 233 (283)
T ss_pred cCCCceEecccccccccccchhe----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 99999999999998765332111 11123345778999999988889999999999999999998 88887543211
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
.....+............. ..+.+++.+||+.+|++||+++|+++.|+.
T Consensus 234 --~~~~~i~~~~~~~~~~~~~----------------------~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 --DVIEMIRNRQVLPCPDDCP----------------------AWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred --HHHHHHHcCCcCCCCCCCC----------------------HHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111111111000011111 112237778999999999999999999863
No 205
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-35 Score=301.26 Aligned_cols=247 Identities=27% Similarity=0.425 Sum_probs=189.4
Q ss_pred CccccccceEEEEEEeCCCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecC
Q 004218 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLG 539 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 539 (767)
+.||+|+||.||+|...+++.||+|.+..... .....+.+|+++++.++||||+++++++.. ....++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~ 75 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMELVP 75 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEECCC
Confidence 36899999999999988889999999865433 233468899999999999999999999653 345699999999
Q ss_pred CCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhc
Q 004218 540 NGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619 (767)
Q Consensus 540 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 619 (767)
+++|.+++.... ..+++..+..++.|++.|+.|+|+. +++||||||+||+++.++.+||+|||++.......
T Consensus 76 ~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 76 GGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 999999986543 2378999999999999999999998 99999999999999999999999999986533221
Q ss_pred CCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhcc
Q 004218 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVLD 698 (767)
Q Consensus 620 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (767)
.. ......++..|+|||++.+..++.++||||||+++|++++ |..||...... .....+...........+.
T Consensus 148 ~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~ 220 (250)
T cd05085 148 YS-----SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEKGYRMSCPQKCP 220 (250)
T ss_pred cc-----cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCCCCCCCCCCC
Confidence 10 1112234577999999988889999999999999999998 99998643211 1111111111111000011
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 699 RELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 221 ----------------------~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 ----------------------DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----------------------HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11233777899999999999999999874
No 206
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1e-35 Score=303.85 Aligned_cols=253 Identities=31% Similarity=0.494 Sum_probs=194.6
Q ss_pred CccccccceEEEEEEeCC----CcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE----GISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.... +..||+|.+...... ..+.+.+|++.++.++|+|++++++++. .+...++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 468999999999999754 788999998755433 3678899999999999999999999864 356779999
Q ss_pred eecCCCChhhhhcccCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 536 EFLGNGSLGDWIHGERKN---EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||||+||++++++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999875210 0023489999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
........ ........++..|+|||.+.+..++.++||||+|+++|+|++ |..||..... .............
T Consensus 153 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~ 226 (262)
T cd00192 153 RDVYDDDY----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRKGYRL 226 (262)
T ss_pred cccccccc----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCC
Confidence 87644321 111233457889999999988889999999999999999999 6899866421 1111111111110
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.....++ ..+.+++.+||+.+|++|||+.|++++|+
T Consensus 227 ~~~~~~~----------------------~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 PKPEYCP----------------------DELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCccCC----------------------hHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111111 11223677899999999999999999873
No 207
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.8e-36 Score=304.20 Aligned_cols=255 Identities=26% Similarity=0.403 Sum_probs=188.2
Q ss_pred CccccccceEEEEEEeCC----CcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE----GISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+.+ +..||+|.+... .....+.+.+|+.+++.++|||++++++++.. .+...++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 468999999999998532 457999987532 22345678899999999999999999997642 234568999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+.+|+|.+++..... ..++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999975432 267888899999999999999998 9999999999999999999999999999754
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCC-CCCCCcccCCcchhhHhhhhcccchh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGM-SPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
....... ........++..|+|||.+.+..++.++||||||+++|||++|+ +||..... ...........+....
T Consensus 149 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 224 (262)
T cd05058 149 YDKEYYS--VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQGRRLLQP 224 (262)
T ss_pred cCCccee--ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhcCCCCCCC
Confidence 3221100 01112234577899999998888999999999999999999954 55543211 1111111111000000
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
.... ..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 225 ~~~~----------------------~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 225 EYCP----------------------DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CcCC----------------------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 0001 112237778999999999999999999988753
No 208
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.3e-36 Score=310.24 Aligned_cols=251 Identities=25% Similarity=0.347 Sum_probs=193.3
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
+.|++.+.||+|+||.||+|.... ++.||+|.+........+.+.+|+++++.++|||++++++++. .+...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEEE
Confidence 578899999999999999999764 8899999997666566678889999999999999999999854 3456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|..++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 87 v~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELD-----RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 999999999998876433 2389999999999999999999998 99999999999999999999999999986
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
...... .......++..|+|||++. ...++.++|||||||++|+|++|+.||...... ....+.....
T Consensus 159 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~ 231 (292)
T cd06644 159 KNVKTL------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSE 231 (292)
T ss_pred eccccc------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHHHHHhcCC
Confidence 532211 1112345788999999875 344678999999999999999999998653211 1111111100
Q ss_pred cccc-hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKN-AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+.. ....+ .. -+.+++.+||+.||++||+++|++++
T Consensus 232 ~~~~~~~~~~------------------~~----~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 232 PPTLSQPSKW------------------SM----EFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CccCCCCccc------------------CH----HHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000 00000 01 12236778999999999999999874
No 209
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.3e-36 Score=333.34 Aligned_cols=203 Identities=24% Similarity=0.352 Sum_probs=163.9
Q ss_pred HHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCC------CCceeEEeee
Q 004218 448 DELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRH------RNLVKLITSC 520 (767)
Q Consensus 448 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~~~~ 520 (767)
+++....++|++.+.||+|+||.||+|.+. .++.||||+++... .....+..|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344456789999999999999999999975 47889999986322 223445667777776654 4588888886
Q ss_pred ecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeC
Q 004218 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 521 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~ 599 (767)
.. ...++++|||++ +++|.+++.... .+++..+..|+.||+.||+|||+ . +||||||||+||+++
T Consensus 201 ~~----~~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~ 266 (467)
T PTZ00284 201 QN----ETGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILME 266 (467)
T ss_pred Ec----CCceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEe
Confidence 42 345689999998 678999886543 38999999999999999999997 5 999999999999998
Q ss_pred CCC----------------ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHH
Q 004218 600 EDM----------------TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLE 663 (767)
Q Consensus 600 ~~~----------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e 663 (767)
.++ .+||+|||.+..... ......||..|+|||++.+..++.++|||||||++||
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~---------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 267 TSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH---------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred cCCcccccccccccCCCCceEEECCCCccccCcc---------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 765 499999998753211 1234568999999999999999999999999999999
Q ss_pred HHhCCCCCCCc
Q 004218 664 IFTGMSPTHES 674 (767)
Q Consensus 664 l~tg~~p~~~~ 674 (767)
|++|+.||+..
T Consensus 338 lltG~~pf~~~ 348 (467)
T PTZ00284 338 LYTGKLLYDTH 348 (467)
T ss_pred HHhCCCCCCCC
Confidence 99999999653
No 210
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.2e-36 Score=315.31 Aligned_cols=199 Identities=25% Similarity=0.364 Sum_probs=166.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCccccee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 530 (767)
.|+..+.||+|+||.||+|... +++.||+|++... .....+.+..|..+++.+. |++|+++++++ ...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 3677899999999999999975 5889999998643 2234456778899988885 57777888874 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 899999999999999986543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||...
T Consensus 147 ~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~ 204 (323)
T cd05615 147 MCKEHMVDG------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 204 (323)
T ss_pred cccccCCCC------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCC
Confidence 987532211 1123356899999999999889999999999999999999999999653
No 211
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.2e-36 Score=312.79 Aligned_cols=267 Identities=24% Similarity=0.340 Sum_probs=193.0
Q ss_pred hcCCCCCCccccccceEEEEEEeCC---------------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE---------------GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLI 517 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~---------------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~ 517 (767)
.++|++.+.||+|+||.||++...+ ...||+|.++.... .....+.+|++++++++|||+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 3589999999999999999987642 23589999864422 2345688999999999999999999
Q ss_pred eeeecCCcccceeeEEEEeecCCCChhhhhcccCCC------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC
Q 004218 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL 591 (767)
Q Consensus 518 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 591 (767)
+++. .....++||||+++++|.+++...... .....+++..++.++.|++.|++|||+. +++||||
T Consensus 84 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl 155 (295)
T cd05097 84 GVCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL 155 (295)
T ss_pred EEEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 9964 345679999999999999998653211 1112378899999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh--CCC
Q 004218 592 KPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT--GMS 669 (767)
Q Consensus 592 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t--g~~ 669 (767)
||+||++++++.+||+|||++........ ........++..|+|||++.+..++.++||||||+++|+|++ |..
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~ 231 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDY----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQ 231 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCcc----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999975432211 011122335678999999988889999999999999999998 556
Q ss_pred CCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 670 PTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 670 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
||....... ........+... ........+. ....-+.+++.+||+.||++|||++++++.|+
T Consensus 232 p~~~~~~~~--~~~~~~~~~~~~--------~~~~~~~~~~-------~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 232 PYSLLSDEQ--VIENTGEFFRNQ--------GRQIYLSQTP-------LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCcccChHH--HHHHHHHhhhhc--------cccccCCCCC-------CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 765422111 111110000000 0000000000 00112333788999999999999999999886
No 212
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.1e-36 Score=312.21 Aligned_cols=266 Identities=23% Similarity=0.342 Sum_probs=193.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-----------------CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-----------------EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKL 516 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~ 516 (767)
++|++.+.||+|+||.||++... ++..||+|++.... ......+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 57999999999999999998643 23468999986442 2334678899999999999999999
Q ss_pred EeeeecCCcccceeeEEEEeecCCCChhhhhcccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC
Q 004218 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN-----EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL 591 (767)
Q Consensus 517 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 591 (767)
++++. .+...++||||+++|+|.+++...... .....+++.++..++.|++.|++|||+. +++||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 99864 344579999999999999999764422 1123588899999999999999999999 9999999
Q ss_pred CCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh--CCC
Q 004218 592 KPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT--GMS 669 (767)
Q Consensus 592 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t--g~~ 669 (767)
||+||+++.++.++|+|||.++.+...... .......++..|+|||...++.++.++|||||||++|||++ |..
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~ 232 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYY----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQ 232 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcce----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCC
Confidence 999999999999999999999765332111 11122234678999999888889999999999999999998 677
Q ss_pred CCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 670 PTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 670 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
||....... ........+..... ........ . ....+.+++.+||+.||++|||+.|+++.|+
T Consensus 233 p~~~~~~~~--~~~~~~~~~~~~~~-------~~~~~~~~----~----~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 233 PYSQLSDEQ--VIENTGEFFRDQGR-------QVYLPKPA----L----CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CccccChHH--HHHHHHHHHhhccc-------cccCCCCC----C----CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 875432211 11000000000000 00000000 0 0112233777999999999999999999886
No 213
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.7e-36 Score=310.11 Aligned_cols=252 Identities=26% Similarity=0.403 Sum_probs=195.7
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.++|++.+.||.|+||.||+|.+. ++..||+|++........+.+.+|++++++++||||+++++++. .+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEE
Confidence 357899999999999999999975 58899999997665556678889999999999999999999854 455679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... ..+++.++..++.|++.|+.|||+. +|+||||||+||+++.++.++|+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 9999999999999987543 2489999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
........ ......|+..|+|||.+. ...++.++||||+|+++|+|++|+.||....... ........
T Consensus 151 ~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~ 223 (280)
T cd06611 151 AKNKSTLQ------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILKS 223 (280)
T ss_pred hhhccccc------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhcC
Confidence 75432211 112345889999999874 3446789999999999999999999986532111 11111110
Q ss_pred hcccc-hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 NFPKN-AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..+.. .+..++ ..+.+++.+||+.+|++||++.+++++
T Consensus 224 ~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 224 EPPTLDQPSKWS----------------------SSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCCCcCCcccCC----------------------HHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00000 000011 112236778999999999999999876
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.1e-35 Score=303.69 Aligned_cols=254 Identities=27% Similarity=0.404 Sum_probs=197.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
++|++.+.||+|+||.||+|... +++.+|+|++........+.+.+|++++++++||||+++++++ .....+++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEEE
Confidence 57899999999999999999975 4788999999766555678899999999999999999999985 34567899
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
+|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 999999999999987642 2389999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC---CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE---KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
....... ......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||........ ........++
T Consensus 150 ~~~~~~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~~~~~ 222 (262)
T cd06613 150 QLTATIA------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISKSNFP 222 (262)
T ss_pred hhhhhhh------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCC
Confidence 6543211 11234578899999998776 788999999999999999999999865322111 1001011000
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
... . ..... ....+.+++.+||..+|.+|||+++++.+
T Consensus 223 ~~~--~-------------~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 223 PPK--L-------------KDKEK----WSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred Ccc--c-------------cchhh----hhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0 00001 11122337779999999999999999863
No 215
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.8e-36 Score=323.47 Aligned_cols=206 Identities=26% Similarity=0.348 Sum_probs=172.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
+.|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+.++..++||+|+++++.+ .+...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 36888999999999999999976 4899999998643 233456778899999999999999999984 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999997543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCC-----------------------------ccccccccccCCCCccCccccCCCCCCCcccchhhhHHH
Q 004218 611 LARSLLERIGNQ-----------------------------SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVML 661 (767)
Q Consensus 611 ~a~~~~~~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il 661 (767)
++.......... ..........||+.|+|||++.+..++.++||||+||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 987543211000 000011234699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCc
Q 004218 662 LEIFTGMSPTHES 674 (767)
Q Consensus 662 ~el~tg~~p~~~~ 674 (767)
|||++|+.||...
T Consensus 227 yel~tG~~Pf~~~ 239 (360)
T cd05627 227 YEMLIGYPPFCSE 239 (360)
T ss_pred eecccCCCCCCCC
Confidence 9999999999654
No 216
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8e-36 Score=306.57 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=196.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||.|++|.||+|.+. +++.||+|.+.... ......+.+|+++++.++|+|++++++++. ++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 36888999999999999999976 48899999986543 344567889999999999999999999854 446789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+||+++++|.+++... ++++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999999754 389999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
+....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||....... ....+....+..
T Consensus 146 ~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~~~ 217 (274)
T cd06609 146 GQLTSTMS------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPKNNPPS 217 (274)
T ss_pred eeeccccc------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhhcCCCC
Confidence 77643211 1123457889999999998889999999999999999999999986532111 111111111111
Q ss_pred hhhh-ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQV-LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... ++. .+.+++.+||..||++|||+++++++
T Consensus 218 ~~~~~~~~----------------------~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGNKFSK----------------------PFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred CcccccCH----------------------HHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 0000 111 12236678999999999999999874
No 217
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.9e-36 Score=316.76 Aligned_cols=193 Identities=33% Similarity=0.430 Sum_probs=160.4
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHH-HHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECE-ALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|++. +++.||+|++.... ......+.+|.. +++.++||||+++++++ .+.+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999975 48899999986432 222344555554 57889999999999885 3456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999998886533 388899999999999999999998 9999999999999999999999999998643
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 198 (321)
T cd05603 147 VEPE------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198 (321)
T ss_pred CCCC------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCC
Confidence 2111 112345689999999999988999999999999999999999999965
No 218
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8.8e-36 Score=307.67 Aligned_cols=266 Identities=25% Similarity=0.366 Sum_probs=200.7
Q ss_pred cCHHHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeec
Q 004218 445 ISYDELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSS 522 (767)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 522 (767)
.+..++..+.+.|++.+.||+|+||.||+|.+. +++.||+|++.... .....+..|+.+++++ +|||++++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 455666777899999999999999999999975 48899999986443 2345678899999998 69999999998754
Q ss_pred CCc-ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC
Q 004218 523 LDF-KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED 601 (767)
Q Consensus 523 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~ 601 (767)
... ......+++|||+++|+|.+++...+ ...+++..+..++.|++.|++|||+. +|+||||+|+||+++++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK----GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 321 23567899999999999999997543 23478888999999999999999999 99999999999999999
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
+.++|+|||.+........ ......|+..|+|||.+. ...++.++||||+||++|||++|+.||.....
T Consensus 158 ~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~ 231 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVG------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP 231 (282)
T ss_pred CCEEEeeCcchhhhhcccc------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH
Confidence 9999999999876532211 112345889999999876 34578899999999999999999999865322
Q ss_pred CCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 677 GEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
... .........+......+ . ..+.+++.+||+.||.+|||+.|++++
T Consensus 232 ~~~-~~~~~~~~~~~~~~~~~------------------~----~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 232 MRA-LFLIPRNPPPKLKSKKW------------------S----KKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred Hhh-hhhHhhCCCCCCccccc------------------C----HHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 111 00000000000000000 1 112237779999999999999999763
No 219
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.2e-35 Score=303.67 Aligned_cols=204 Identities=27% Similarity=0.418 Sum_probs=169.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-----cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-----GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|+..+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.++++++||||+++++++.. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 46889999999999999999975 488999998854321 233568889999999999999999998642 234
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...+++|||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 56789999999999999997543 288999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
||++.......... .......++..|+|||.+.+..++.++||||+||++||+++|+.||..
T Consensus 150 fg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 150 FGASKRLQTICMSG---TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred CCCccccccccccC---CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 99987553211111 111234578899999999988899999999999999999999999865
No 220
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-36 Score=324.94 Aligned_cols=195 Identities=22% Similarity=0.284 Sum_probs=164.4
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
..+|.+.+.||+|+||.||+|.+.. ++.||||... ...+.+|++++++++|+||+++++++. .++..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~-----~~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRV-----VGGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEE-----ECCEEE
Confidence 4579999999999999999999764 7899999642 234678999999999999999999854 345679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|||++. ++|.+++.... ..+++.++..|+.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 237 lv~e~~~-~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKYR-SDLYTYLGARL-----RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEccC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 9999995 69998886532 2499999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCC
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTH 672 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 672 (767)
+........ .......||..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 308 ~~~~~~~~~----~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 308 CFARGSWST----PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred eeccccccc----ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 765322111 11123568999999999999999999999999999999999887653
No 221
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-35 Score=307.34 Aligned_cols=274 Identities=27% Similarity=0.333 Sum_probs=200.7
Q ss_pred cCCCCCCccccccceEEEEEEeC-----CCcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-----EGISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
+.|++.+.||+|+||.||+|.+. ++..||+|++...... ..+.+.+|+++++.+.||||+++++++.. ...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 46778899999999999999853 3678999998755443 46789999999999999999999998653 234
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 567999999999999999976442 389999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
||.+.......... .......++..|+|||...+..++.++||||||+++|||++|+.|+............ ..
T Consensus 153 fg~~~~~~~~~~~~---~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~---~~ 226 (284)
T cd05038 153 FGLAKVLPEDKDYY---YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIG---IA 226 (284)
T ss_pred cccccccccCCcce---eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccc---cc
Confidence 99998764221110 1111223456799999998888999999999999999999999997553322111000 00
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
............+......... ......+.+++.+||+.+|++||||.|++++|+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 227 QGQMIVTRLLELLKEGERLPRP------PSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cccccHHHHHHHHHcCCcCCCC------ccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0000000000111100000000 00111223378899999999999999999999875
No 222
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.8e-36 Score=309.03 Aligned_cols=253 Identities=32% Similarity=0.492 Sum_probs=191.5
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchh--hHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWK--SFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|++.+.||+|+||+||++.... ++.||+|++......... ...+|+.++++++||||+++++++. .....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQ-----DDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEE-----ESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccc-----ccccccc
Confidence 5678899999999999999765 678999999765433322 3456999999999999999999954 4667789
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++.... .+++.++..++.|+++||++||+. +|+|+||||+||++++++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 999999999999998332 389999999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccC-CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
.... .........++..|+|||++. +..++.++||||+|+++|+|++|..||...... ..
T Consensus 147 ~~~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~----------- 207 (260)
T PF00069_consen 147 KLSE------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQ----------- 207 (260)
T ss_dssp ESTS------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HH-----------
T ss_pred cccc------cccccccccccccccccccccccccccccccccccccccccccccccccccccch--hh-----------
Confidence 5311 111223456889999999988 788999999999999999999999998764100 00
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
....................... ..+.+++.+||+.||++|||+.|++++
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 208 -LEIIEKILKRPLPSSSQQSREKS----EELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp -HHHHHHHHHTHHHHHTTSHTTSH----HHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred -hhhhhhcccccccccccccchhH----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00001111000000000000000 223337779999999999999999863
No 223
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.4e-35 Score=301.64 Aligned_cols=251 Identities=27% Similarity=0.464 Sum_probs=193.8
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+.... .....+.+|++++++++|||++++++++. .....++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceEEE
Confidence 4678889999999999999998778899999886332 23467889999999999999999999853 44567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||.+..
T Consensus 78 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 149 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRF 149 (256)
T ss_pred EEcCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceee
Confidence 99999999999987543 2378999999999999999999998 999999999999999999999999999875
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......++..|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..............
T Consensus 150 ~~~~~~~-----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 222 (256)
T cd05112 150 VLDDQYT-----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINAGFRLYK 222 (256)
T ss_pred cccCccc-----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhCCCCCCC
Confidence 5332111 0112234678999999988889999999999999999998 89998643211 11111111000000
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
..... ..+.+++.+||+.+|++|||+.|++++|
T Consensus 223 ~~~~~----------------------~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLAS----------------------QSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCC----------------------HHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 00011 1122377799999999999999999987
No 224
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2e-35 Score=301.01 Aligned_cols=254 Identities=24% Similarity=0.398 Sum_probs=196.9
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.++|++.+.||+|+||.||+|.+.++..||+|.+... ....+.+.+|+++++.++|+||+++++++.. ...++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~ 77 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIYI 77 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeEE
Confidence 4678999999999999999999877888999987643 2234678899999999999999999998542 45699
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
+|||+++++|.+++.... ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 78 ITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred EEEeCCCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCccee
Confidence 999999999999997643 23488999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
....... .......++..|+|||++....++.++||||||+++|++++ |+.||...... .........++..
T Consensus 151 ~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~ 223 (260)
T cd05073 151 VIEDNEY-----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMP 223 (260)
T ss_pred eccCCCc-----ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCCCC
Confidence 6532211 11112235677999999988889999999999999999999 89998643211 1112221111111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
..... ...+.+++.+||+.+|++||++.++.+.|+.
T Consensus 224 ~~~~~----------------------~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 RPENC----------------------PEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CcccC----------------------CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11001 1112237778999999999999999999874
No 225
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6e-37 Score=288.74 Aligned_cols=209 Identities=27% Similarity=0.351 Sum_probs=175.5
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-----CcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-----GISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
...|+....||+|.||.||+|.-.+ ...+|+|.++.+ .++......+|+..++.++|||++.+..++. .
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl----~ 98 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL----S 98 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh----c
Confidence 3578999999999999999996432 237999999654 3344567889999999999999999999864 2
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC----C
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED----M 602 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~----~ 602 (767)
.+..+++++||.+. +|.++++-.+.... +.++...+..|+.||+.|+.|||++ -|+||||||.||++..+ |
T Consensus 99 ~d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG 173 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERG 173 (438)
T ss_pred cCceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccC
Confidence 36789999999988 99999987765443 5699999999999999999999999 89999999999999877 8
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.+||+|||+++.+.+..... .....++-|.+|+|||.+.+. .|+++.||||.|||+.||+|-++-|...
T Consensus 174 ~VKIaDlGlaR~~~~plkpl---~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 174 RVKIADLGLARLFNNPLKPL---ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred eeEeecccHHHHhhcccccc---ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 99999999999886654322 223456779999999998875 5899999999999999999998887654
No 226
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.5e-36 Score=310.18 Aligned_cols=267 Identities=25% Similarity=0.345 Sum_probs=195.7
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-----------------CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCcee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-----------------GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVK 515 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~ 515 (767)
..+|++.+.||+|+||.||+|.+.. +..||+|.+..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4579999999999999999998642 24689999865432 34567889999999999999999
Q ss_pred EEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeec
Q 004218 516 LITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKN-----EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCD 590 (767)
Q Consensus 516 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 590 (767)
+++++. .+...++||||+++++|.+++...... .....+++..++.++.|++.||+|||+. +|+|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999864 335679999999999999999765421 1123589999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh--CC
Q 004218 591 LKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT--GM 668 (767)
Q Consensus 591 lkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t--g~ 668 (767)
|||+||+++.++.++|+|||.++........ .......++..|+|||++.+..++.++||||||+++|||++ |.
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 231 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE 231 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCC
Confidence 9999999999999999999998754322111 11123346778999999988889999999999999999998 66
Q ss_pred CCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 669 SPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 669 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
.||..... ..........+........ .... .. ....+.+++.+||+.||++|||+.|+++.|
T Consensus 232 ~p~~~~~~--~~~~~~~~~~~~~~~~~~~-------~~~~----~~----~~~~l~~li~~cl~~~p~~Rpt~~el~~~L 294 (296)
T cd05051 232 QPYEHLTD--QQVIENAGHFFRDDGRQIY-------LPRP----PN----CPKDIYELMLECWRRDEEDRPTFREIHLFL 294 (296)
T ss_pred CCCCCcCh--HHHHHHHHhcccccccccc-------CCCc----cC----CCHHHHHHHHHHhccChhcCCCHHHHHHHh
Confidence 77744221 1111111100000000000 0000 00 001123377899999999999999999988
Q ss_pred H
Q 004218 749 K 749 (767)
Q Consensus 749 ~ 749 (767)
+
T Consensus 295 ~ 295 (296)
T cd05051 295 Q 295 (296)
T ss_pred c
Confidence 5
No 227
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.9e-35 Score=304.60 Aligned_cols=258 Identities=25% Similarity=0.371 Sum_probs=197.9
Q ss_pred cCCCCCCccccccceEEEEEEeCC-Cc----EEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GI----SVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|++.+.||+|+||.||+|.+.. |+ .||+|....... .....+.+|+.++++++|||++++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578889999999999999999643 32 589998764432 345678899999999999999999998753
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 456899999999999999976432 389999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 687 (767)
||.++......... ......++..|+|||.+....++.++||||||+++||+++ |+.||...... .....+..
T Consensus 153 fg~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~ 226 (279)
T cd05057 153 FGLAKLLDVDEKEY----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEK 226 (279)
T ss_pred CcccccccCcccce----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhC
Confidence 99998654321111 0111224567999999988889999999999999999998 99998653221 11111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKI 754 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 754 (767)
..+...+...+.. +.+++.+||..||++|||+.++++.|+++.++
T Consensus 227 ~~~~~~~~~~~~~----------------------~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 227 GERLPQPPICTID----------------------VYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCCCCCCCCCCHH----------------------HHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 1111111111111 11266789999999999999999999988653
No 228
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-35 Score=303.06 Aligned_cols=257 Identities=25% Similarity=0.362 Sum_probs=196.7
Q ss_pred hcCCCCCCccccccceEEEEEEeCC----CcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
..+|++.+.||+|+||.||+|.+.+ ...||+|...... ....+.+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 3468888999999999999998643 3468999886544 3345678999999999999999999998642
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d 150 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGD 150 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEcc
Confidence 33589999999999999997543 2389999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~ 687 (767)
||.++........ ......++..|+|||.+....++.++||||||+++||+++ |..||....... .......
T Consensus 151 ~g~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~ 223 (270)
T cd05056 151 FGLSRYLEDESYY-----KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIEN 223 (270)
T ss_pred Cceeeecccccce-----ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHc
Confidence 9998765332110 1112234567999999988889999999999999999986 999986543211 1111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
..+......++ ..+.+++.+|+..+|++|||+.++++.|+++.+
T Consensus 224 ~~~~~~~~~~~----------------------~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 GERLPMPPNCP----------------------PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCcCCCCCCCC----------------------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11000001111 112236778999999999999999999998765
No 229
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.6e-36 Score=339.30 Aligned_cols=261 Identities=23% Similarity=0.297 Sum_probs=194.2
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
....++|++.+.||+|+||.||+|.+.. +..||+|++.... ......+..|+.++++++||||+++++++.. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KA 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cC
Confidence 3455789999999999999999999764 7789999986432 2345678899999999999999999998653 23
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC----CCeEeecCCCCCeeeCC---
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCE----VPIVHCDLKPGNILLDE--- 600 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~Dlkp~NIl~~~--- 600 (767)
...+|+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+||||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 45789999999999999999753211 2349999999999999999999998521 25999999999999964
Q ss_pred --------------CCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHH
Q 004218 601 --------------DMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEI 664 (767)
Q Consensus 601 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el 664 (767)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccc-------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 3458999999997653221 1233468999999999854 4578999999999999999
Q ss_pred HhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHH
Q 004218 665 FTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREA 744 (767)
Q Consensus 665 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~ev 744 (767)
++|+.||....... .+...+.. .+....... . ..+.+++..||+.+|.+||++.|+
T Consensus 237 LTGk~PF~~~~~~~-qli~~lk~-~p~lpi~~~------------------S----~eL~dLI~~~L~~dPeeRPSa~Ql 292 (1021)
T PTZ00266 237 CSGKTPFHKANNFS-QLISELKR-GPDLPIKGK------------------S----KELNILIKNLLNLSAKERPSALQC 292 (1021)
T ss_pred HHCCCCCCcCCcHH-HHHHHHhc-CCCCCcCCC------------------C----HHHHHHHHHHhcCChhHCcCHHHH
Confidence 99999996432111 11111100 000000000 1 112237778999999999999999
Q ss_pred HHH
Q 004218 745 LRR 747 (767)
Q Consensus 745 l~~ 747 (767)
+.+
T Consensus 293 L~h 295 (1021)
T PTZ00266 293 LGY 295 (1021)
T ss_pred hcc
Confidence 853
No 230
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=9.6e-36 Score=303.25 Aligned_cols=239 Identities=27% Similarity=0.394 Sum_probs=181.0
Q ss_pred CccccccceEEEEEEeCC-------------CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 461 NLIGSGSFGSVYKGYLRE-------------GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
+.||+|+||.||+|.... ...||+|.+..........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 468999999999998532 23589998865555556678899999999999999999999653
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc----
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT---- 603 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~---- 603 (767)
....++||||+++|+|..++.... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS-----DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 344589999999999999886532 2389999999999999999999998 9999999999999986654
Q ss_pred ---eEEccccchhhhhhhcCCCccccccccccCCCCccCccccC-CCCCCCcccchhhhHHHHHHH-hCCCCCCCcccCC
Q 004218 604 ---AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIF-TGMSPTHESFAGE 678 (767)
Q Consensus 604 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~-tg~~p~~~~~~~~ 678 (767)
++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||.......
T Consensus 148 ~~~~~l~d~g~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 148 GPFIKLSDPGIPITVLSR----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred CceeEeCCCCCCccccCc----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 899999998654211 2234788899999886 466899999999999999998 5888875422111
Q ss_pred cchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 679 VSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
. ........+. .. ...+ .+.+++.+||+.||.+||++.|+++.+
T Consensus 218 ~--~~~~~~~~~~-----~~---------------~~~~----~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 218 K--ERFYEGQCML-----VT---------------PSCK----ELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred H--HHHHhcCccC-----CC---------------CChH----HHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 0000000000 00 0001 123377799999999999999999876
No 231
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2e-35 Score=312.25 Aligned_cols=265 Identities=24% Similarity=0.391 Sum_probs=198.3
Q ss_pred cCCCCCCccccccceEEEEEEeCC--------CcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCC
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE--------GISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLD 524 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 524 (767)
.+|++.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|+++++++ +||||++++++|.
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 88 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT--- 88 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc---
Confidence 478999999999999999997521 2368999886432 23456788999999999 7999999999964
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCC
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPG 594 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 594 (767)
.+...+++|||+++|+|.+++...... .....+++.++..++.|++.||+|||+. +++||||||+
T Consensus 89 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~ 163 (334)
T cd05100 89 --QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAAR 163 (334)
T ss_pred --cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccccc
Confidence 345679999999999999999754321 1234588999999999999999999998 9999999999
Q ss_pred CeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCC
Q 004218 595 NILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHE 673 (767)
Q Consensus 595 NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~ 673 (767)
||+++.++.+||+|||.++......... ......++..|+|||++.+..++.++||||||+++|||++ |..||..
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDYYK----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccccc----cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999997653321110 1112234567999999999899999999999999999998 8888854
Q ss_pred cccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHH
Q 004218 674 SFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~ 753 (767)
.... .....+............ .. .+.+++.+||+.+|++|||+.|+++.|+.+..
T Consensus 240 ~~~~--~~~~~~~~~~~~~~~~~~------------------~~----~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 240 IPVE--ELFKLLKEGHRMDKPANC------------------TH----ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCHH--HHHHHHHcCCCCCCCCCC------------------CH----HHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 3211 111111111110000000 01 12237778999999999999999999998875
Q ss_pred HH
Q 004218 754 IL 755 (767)
Q Consensus 754 ~~ 755 (767)
..
T Consensus 296 ~~ 297 (334)
T cd05100 296 VT 297 (334)
T ss_pred hc
Confidence 33
No 232
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.8e-35 Score=302.48 Aligned_cols=264 Identities=25% Similarity=0.364 Sum_probs=195.6
Q ss_pred CCCCCccccccceEEEEEEeC----CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc-cce
Q 004218 457 FSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK-NME 529 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 529 (767)
|++.+.||+|+||.||+|.+. +++.||||++... .....+++.+|+++++.++||||+++++++...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 677889999999999999854 3688999998644 233456788999999999999999999987543211 122
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++++||+++|+|.+++...........+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 4578999999999998876443222223488999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|.++......... ......++..|++||.+.+..++.++||||||+++|+|++ |+.||..... .....+....
T Consensus 158 g~~~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~ 231 (273)
T cd05074 158 GLSKKIYSGDYYR----QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKG 231 (273)
T ss_pred cccccccCCccee----cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcC
Confidence 9997653221110 1112235678999999988889999999999999999999 8888854322 1111111110
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
......... ...+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 232 ~~~~~~~~~----------------------~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 232 NRLKQPPDC----------------------LEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CcCCCCCCC----------------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000000000 01122377789999999999999999999875
No 233
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.7e-35 Score=301.19 Aligned_cols=249 Identities=29% Similarity=0.404 Sum_probs=192.4
Q ss_pred CccccccceEEEEEEeCC--C--cEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE--G--ISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++||||+++++++.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 468999999999999653 3 3699999876554 556788999999999999999999998642 5679999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999976431 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhccc-ch
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPK-NA 693 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~-~~ 693 (767)
....... .......++..|+|||++.+..++.++|||||||++|+|++ |+.||....... ........... ..
T Consensus 148 ~~~~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~~~~~ 222 (257)
T cd05040 148 PQNEDHY---VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKEGERLER 222 (257)
T ss_pred cccccce---ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcCCcCCC
Confidence 4422111 11123446788999999988889999999999999999998 999985432211 11111100000 00
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.. .....+.+++.+||+.+|++|||+.|+++.|.
T Consensus 223 ~~----------------------~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 223 PE----------------------ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred Cc----------------------cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00 01112233777999999999999999999874
No 234
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.1e-36 Score=322.97 Aligned_cols=198 Identities=24% Similarity=0.285 Sum_probs=166.8
Q ss_pred hcCCCCCCccccccceEEEEEEeC---CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR---EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
..+|.+.+.||+|+||.||++... .++.||+|.+... +...+|++++++++||||+++++++ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 457999999999999999999754 3678999987532 3456899999999999999999985 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++|||++. ++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.++|+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 799999996 5899888443 2389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
+++........ .......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 231 ~a~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 231 AACKLDAHPDT----PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred cccccCccccc----ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 99765432111 11234568999999999999999999999999999999999999986543
No 235
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.1e-35 Score=307.74 Aligned_cols=260 Identities=27% Similarity=0.402 Sum_probs=194.7
Q ss_pred hcCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
.++|++.+.||+|+||.||+|... ++..||+|.+..... ...+.+.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----- 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA----- 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence 467999999999999999999863 467899999864432 33467889999999999999999999864
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCC----------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeec
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKN----------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCD 590 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 590 (767)
.+...++||||+++|+|.+++...... .....+++.+++.++.|++.||+|||+. +++|||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 344569999999999999999743211 1123478999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCC
Q 004218 591 LKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMS 669 (767)
Q Consensus 591 lkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~ 669 (767)
|||+||++++++.++|+|||.+.......... ......++..|+|||.+.+..++.++|||||||++|||++ |..
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~ 231 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYK----ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ 231 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcccc----ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999987543221100 0112234567999999988899999999999999999998 888
Q ss_pred CCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 670 PTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 670 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
||...... .....+............+ ..+.+++.+||+.||++|||+.|+++.|+
T Consensus 232 p~~~~~~~--~~~~~~~~~~~~~~~~~~~----------------------~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 232 PYYGMAHE--EVIYYVRDGNVLSCPDNCP----------------------LELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCCHH--HHHHHHhcCCCCCCCCCCC----------------------HHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 87543211 1111111000000000000 11223777899999999999999999986
No 236
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.6e-36 Score=305.64 Aligned_cols=238 Identities=29% Similarity=0.392 Sum_probs=179.3
Q ss_pred ccccccceEEEEEEeCC-------------------------CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeE
Q 004218 462 LIGSGSFGSVYKGYLRE-------------------------GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKL 516 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 516 (767)
+||+|+||.||+|.... ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 23589998865544445678899999999999999999
Q ss_pred EeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCe
Q 004218 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNI 596 (767)
Q Consensus 517 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NI 596 (767)
+++|.. ....++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEK-----GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 999753 345699999999999999986532 2388999999999999999999998 999999999999
Q ss_pred eeCCCC-------ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHH-hC
Q 004218 597 LLDEDM-------TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIF-TG 667 (767)
Q Consensus 597 l~~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~-tg 667 (767)
+++..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g 218 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSR----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDG 218 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccc----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 997543 4899999988643211 12246788999998865 56799999999999999995 68
Q ss_pred CCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 668 MSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 668 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+.||........ ........+ .+.... . .+.+++.+||+.+|++|||+.++++.
T Consensus 219 ~~p~~~~~~~~~--~~~~~~~~~--~~~~~~------------------~----~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 219 EVPLKERTPSEK--ERFYEKKHR--LPEPSC------------------K----ELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred CCCccccChHHH--HHHHHhccC--CCCCCC------------------h----HHHHHHHHHcccChhhCcCHHHHHHh
Confidence 899865322111 111100000 000000 1 12237778999999999999999998
Q ss_pred H
Q 004218 748 L 748 (767)
Q Consensus 748 L 748 (767)
|
T Consensus 273 L 273 (274)
T cd05076 273 L 273 (274)
T ss_pred h
Confidence 7
No 237
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.4e-35 Score=300.12 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=194.0
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++|+|++++++.+. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 4889999999999999999965 47899999986442 234567889999999999999999998743 2344679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... ...+++.++..++.|++.|+++||+. +++||||||+||+++.++.++|+|||.+
T Consensus 77 lv~e~~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQK----GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 9999999999999997533 23489999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ .........+ .
T Consensus 150 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-~~~~~~~~~~-~ 221 (257)
T cd08223 150 RVLENQCD------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL-VYRIIEGKLP-P 221 (257)
T ss_pred EEecccCC------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHhcCCC-C
Confidence 76532211 11234578899999999998899999999999999999999999864221100 0011111010 0
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... ....+.+++.+|++.||++|||+.|++++
T Consensus 222 ~~~~----------------------~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 222 MPKD----------------------YSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred Cccc----------------------cCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0011 11122337778999999999999999864
No 238
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=307.73 Aligned_cols=263 Identities=27% Similarity=0.416 Sum_probs=206.6
Q ss_pred HHHHHHhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 448 DELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 448 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
++++-.....+..++||.|.||.||.|.|+. .-.||||.++ ++.-..++|++|+.+|+.++|||+|+++|+|..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK-EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~---- 334 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH---- 334 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh-hcchhHHHHHHHHHHHHhhcCccHHHHhhhhcc----
Confidence 3344444567778899999999999999986 6679999986 344457899999999999999999999999864
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
...+|||+|||.+|+|.+|++...+. .++.--.+.++.||+.|++||..+ ++|||||.++|+|+.++..+|+
T Consensus 335 -EpPFYIiTEfM~yGNLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 335 -EPPFYIITEFMCYGNLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred -CCCeEEEEecccCccHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEe
Confidence 33469999999999999999987643 366677889999999999999998 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHh
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~ 685 (767)
+|||+++.+..+..... ....-.+.|.|||.+....++.|+|||+|||++||+.| |-.||..... .+.....
T Consensus 407 ADFGLsRlMtgDTYTAH-----AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--SqVY~LL 479 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTAH-----AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYGLL 479 (1157)
T ss_pred eccchhhhhcCCceecc-----cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH--HHHHHHH
Confidence 99999998754322111 11122467999999999999999999999999999998 6678754211 1222233
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
+..|.-..++-+.+..+. +++.||+.+|++||+++|+-+.++.+-
T Consensus 480 EkgyRM~~PeGCPpkVYe----------------------LMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 480 EKGYRMDGPEGCPPKVYE----------------------LMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred hccccccCCCCCCHHHHH----------------------HHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 333433334444443332 667899999999999999999998653
No 239
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.9e-35 Score=298.31 Aligned_cols=248 Identities=29% Similarity=0.440 Sum_probs=190.6
Q ss_pred CccccccceEEEEEEeCCCcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecC
Q 004218 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLG 539 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 539 (767)
++||+|+||.||+|.+.+++.||+|.+...... ..+.+.+|++++++++||||+++++++. .....++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~~ 75 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELVP 75 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcCC
Confidence 468999999999999877999999988654333 4567899999999999999999999854 4456799999999
Q ss_pred CCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhc
Q 004218 540 NGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERI 619 (767)
Q Consensus 540 ~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 619 (767)
+++|.+++.... ..+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.+.......
T Consensus 76 ~~~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 76 GGSLLTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence 999999986543 2378999999999999999999999 99999999999999999999999999997543211
Q ss_pred CCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccchhhhcc
Q 004218 620 GNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNAQQVLD 698 (767)
Q Consensus 620 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (767)
... ......++..|+|||.+.+..++.++||||+|+++|+|++ |..||...... ..............+..
T Consensus 148 ~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~-- 219 (251)
T cd05041 148 YTV----SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGYRMPAPQL-- 219 (251)
T ss_pred cee----ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCCCCCCCcc--
Confidence 100 0011223567999999988889999999999999999999 78888553221 11111111111000111
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 699 RELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
....+.+++.+||..+|++|||+.|+++.|+
T Consensus 220 --------------------~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 220 --------------------CPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --------------------CCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 1112333777899999999999999999885
No 240
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.4e-35 Score=301.01 Aligned_cols=253 Identities=26% Similarity=0.418 Sum_probs=188.4
Q ss_pred CccccccceEEEEEEeCC-Cc--EEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLRE-GI--SVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|.+.+ +. .+|+|.+.... ....+.+.+|+++++++ +||||+++++++.. ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-----CCCceEEE
Confidence 368999999999999754 43 46888876332 33456788999999999 79999999999643 44569999
Q ss_pred eecCCCChhhhhcccCCC----------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceE
Q 004218 536 EFLGNGSLGDWIHGERKN----------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAK 605 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~k 605 (767)
||+++|+|.+++...+.. .....+++.++..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999754321 1123488999999999999999999998 999999999999999999999
Q ss_pred EccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhH
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~ 684 (767)
|+|||++....... .......+..|+|||++....++.++||||||+++|||++ |+.||...... .....
T Consensus 153 l~dfgl~~~~~~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~ 223 (270)
T cd05047 153 IADFGLSRGQEVYV-------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK 223 (270)
T ss_pred ECCCCCccccchhh-------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHH
Confidence 99999985322110 0011223567999999988889999999999999999997 99998543211 11111
Q ss_pred hhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHH
Q 004218 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQ 752 (767)
Q Consensus 685 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~ 752 (767)
.............+ ..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 224 ~~~~~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 LPQGYRLEKPLNCD----------------------DEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HhCCCCCCCCCcCC----------------------HHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111000000000 11223777999999999999999999998763
No 241
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-35 Score=306.09 Aligned_cols=247 Identities=26% Similarity=0.371 Sum_probs=192.6
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.|+..+.||+|+||.||+|.+. +++.||+|.++... ....+.+.+|++++++++||||+++++++. .+...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceEE
Confidence 4666788999999999999865 47899999986443 334567889999999999999999999853 4556799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++... .+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++|+|||++.
T Consensus 80 v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06642 80 IMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccc
Confidence 99999999999998643 288999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......|+..|+|||++.+..++.++||||||+++|||++|+.||........ ........+...
T Consensus 150 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~ 221 (277)
T cd06642 150 QLTDTQI------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFLIPKNSPPTL 221 (277)
T ss_pred cccCcch------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--HhhhhcCCCCCC
Confidence 6533211 11224578899999999988899999999999999999999999865322111 111111111000
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. .....+.+++.+||+.+|++|||+.|++++
T Consensus 222 ~~----------------------~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 EG----------------------QYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred Cc----------------------ccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00 011112237779999999999999999985
No 242
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.4e-35 Score=309.94 Aligned_cols=202 Identities=25% Similarity=0.356 Sum_probs=161.7
Q ss_pred CccccccceEEEEEEeCC---CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEee
Q 004218 461 NLIGSGSFGSVYKGYLRE---GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEF 537 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 537 (767)
.+||+|+||.||+|+..+ +..||+|.+... .....+.+|+++++.++||||+++++++.. ..+...++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEee
Confidence 579999999999999653 578999988643 233567899999999999999999998753 344567999999
Q ss_pred cCCCChhhhhcccCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee----CCCCceEEcccc
Q 004218 538 LGNGSLGDWIHGERKN---EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL----DEDMTAKVGDFG 610 (767)
Q Consensus 538 ~~~gsL~~~l~~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~----~~~~~~kl~Dfg 610 (767)
+++ +|.+++...... .....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 865 888887543211 1123588999999999999999999999 99999999999999 466799999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+++........ ........||..|+|||++.+. .++.++||||+||++|||+||++||...
T Consensus 158 ~a~~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 158 FARLFNSPLKP---LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ceeccCCCccc---ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99865432211 1112345689999999998764 5789999999999999999999999653
No 243
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.6e-35 Score=306.88 Aligned_cols=250 Identities=23% Similarity=0.342 Sum_probs=196.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
++|.+.+.||+|+||.||++... ++..||+|.+........+.+.+|+.+++.++|||++++++++. .....++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEEE
Confidence 68999999999999999999864 57899999987555555677899999999999999999999854 3456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
|+||+++++|.+++.... +++.++..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 94 VMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEecCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 999999999999986533 78999999999999999999999 99999999999999999999999999886
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......|+..|+|||.+.+..++.++||||||+++|++++|+.||......... ........+..
T Consensus 164 ~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~~~~~~~~~- 235 (293)
T cd06647 164 QITPEQS------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIATNGTPEL- 235 (293)
T ss_pred ccccccc------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eehhcCCCCCC-
Confidence 5433211 112345788999999998888999999999999999999999999653221110 00000000000
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...+.+...+++++.+||..+|++||++.|++.+
T Consensus 236 --------------------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 236 --------------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred --------------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000111123337778999999999999999876
No 244
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.1e-35 Score=304.86 Aligned_cols=199 Identities=28% Similarity=0.390 Sum_probs=168.2
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|+..+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+++++.++|++++++.+++. .++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----cCCEE
Confidence 3677889999999999999965 58899999986432 223345778999999999999999998853 45678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++++|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~ 148 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMG----NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCccHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCc
Confidence 99999999999998886433 23499999999999999999999998 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+....... ......|+..|+|||++.+..++.++||||+|+++|+|++|+.||..
T Consensus 149 ~~~~~~~~-------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 149 AVKIPEGE-------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred ceecCCCC-------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 86542211 11234589999999999888899999999999999999999999965
No 245
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.3e-36 Score=316.79 Aligned_cols=191 Identities=30% Similarity=0.370 Sum_probs=157.6
Q ss_pred cccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcC---CCCCceeEEeeeecCCcccceeeEEEE
Q 004218 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNT---RHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 463 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
||+|+||.||+|+.. +++.||+|++.... ......+..|..++... +||+|+++++++ ......++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 699999999999976 48999999986432 12233455677777655 699999999984 4456789999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999887543 389999999999999999999999 9999999999999999999999999998653
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.... .......||..|+|||++.+. .++.++||||+||++|+|++|+.||..
T Consensus 147 ~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 147 LTDN------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred CCCC------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 2211 112345689999999998754 479999999999999999999999865
No 246
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.3e-35 Score=303.48 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=194.8
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
..|+..+.||.|+||.||+|.+. ++..||+|.+.... ....+.+.+|+++++++.||||+++++++. ++...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEE
Confidence 45778899999999999999975 48899999986443 344567889999999999999999999854 456789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++|+|.+++.... +++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 79 lv~e~~~~~~L~~~i~~~~-------l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAGP-------FDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 9999999999999986532 88899999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......++..|+|||++.+..++.++||||||+++|||++|+.||........ ........+..
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~ 220 (277)
T cd06640 149 GQLTDTQI------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LFLIPKNNPPT 220 (277)
T ss_pred eeccCCcc------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--hhhhhcCCCCC
Confidence 76533211 11234578889999999888899999999999999999999999865322111 00110000100
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. .....-+.+++.+||+.+|++||++.|++++
T Consensus 221 ~~----------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 221 LT----------------------GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred Cc----------------------hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 00 0011122237779999999999999999877
No 247
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3e-35 Score=301.35 Aligned_cols=256 Identities=27% Similarity=0.361 Sum_probs=182.9
Q ss_pred CccccccceEEEEEEeCC---CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLRE---GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||+|.+.+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.. ....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-----VTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----CCCcEEEEE
Confidence 368999999999998643 46799998864432 233578899999999999999999998643 345699999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++...+.. .....++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999754321 123467788889999999999999999 99999999999999999999999999986532
Q ss_pred hhcCCCccccccccccCCCCccCccccCCC-------CCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLGE-------KPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
..... .......++..|+|||++.+. .++.++||||||+++|||++ |+.||........ ....+...
T Consensus 152 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~ 226 (269)
T cd05087 152 KEDYY----VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVREQ 226 (269)
T ss_pred Cccee----ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhcc
Confidence 21110 111234467889999987642 35789999999999999996 9999965322211 00000000
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
... ...+.+. ....+. +.+++.+|| .+|++|||++|+++.|+
T Consensus 227 ~~~----~~~~~~~----------~~~~~~----~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLK----LPKPRLK----------LPLSDR----WYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCC----CCCCccC----------CCCChH----HHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 000 0000000 000111 222666898 68999999999998874
No 248
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.2e-35 Score=309.60 Aligned_cols=271 Identities=23% Similarity=0.301 Sum_probs=193.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|+||.||+|.++ +++.||+|.+.... ......+.+|+++++.++||||+++++++. .....+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeEE
Confidence 57899999999999999999975 48899999986443 233456778999999999999999999954 455679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred EEEeccc-cCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 9999997 59999886543 2388999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
........ ......++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... ....+......
T Consensus 152 ~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~ 223 (301)
T cd07873 152 RAKSIPTK------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGT 223 (301)
T ss_pred hccCCCCC------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCC
Confidence 75432111 11223468899999987654 47889999999999999999999996542211 11111111110
Q ss_pred chhhhccHHHHH----h--hhcc-hhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQ----L--MMSS-ESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~----~--~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.........+.. . .... ..........+...+++++.+|++.||.+|||++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 224 PTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred CChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000000000000 0 0000 000000111122234457889999999999999999873
No 249
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1e-35 Score=313.50 Aligned_cols=204 Identities=21% Similarity=0.249 Sum_probs=163.4
Q ss_pred CCCccccc--cceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 459 HENLIGSG--SFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 459 ~~~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
+.++||+| +|++||++..+ +|+.||+|+++... ....+.+.+|+++++.++||||+++++++. .++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 45789999 78899999965 58999999986543 223456778999999999999999999964 4456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHF----MDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 999999999999996543 12389999999999999999999998 99999999999999999999999998765
Q ss_pred hhhhhcCCC-ccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 614 SLLERIGNQ-SSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
......... ..........++..|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 432211100 00011122346778999999876 45889999999999999999999999653
No 250
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.4e-36 Score=306.18 Aligned_cols=240 Identities=26% Similarity=0.407 Sum_probs=181.2
Q ss_pred CccccccceEEEEEEeCC--------CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 461 NLIGSGSFGSVYKGYLRE--------GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+.||+|+||.||+|.... ..+||+|.+........+.+.+|+.+++.++|||++++++++.. +...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 468999999999998642 23488888865544555678899999999999999999999653 34568
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc--------e
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT--------A 604 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~--------~ 604 (767)
+||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 99999999999999976432 389999999999999999999998 9999999999999987664 6
Q ss_pred EEccccchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCC-CCCCCcccCCcchh
Q 004218 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGM-SPTHESFAGEVSLV 682 (767)
Q Consensus 605 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~-~p~~~~~~~~~~~~ 682 (767)
+++|||.+..... .....++..|+|||++.+. .++.++||||||+++|+|++|. .|+....... ..
T Consensus 148 ~l~d~g~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~ 215 (258)
T cd05078 148 KLSDPGISITVLP----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KL 215 (258)
T ss_pred EecccccccccCC----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HH
Confidence 9999998864322 1234578899999998764 5789999999999999999995 5543321110 00
Q ss_pred hHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 683 KWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
...... ...+.. ... .+.+++.+||+.||++|||++|+++.|+
T Consensus 216 ~~~~~~--~~~~~~------------------~~~----~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 216 QFYEDR--HQLPAP------------------KWT----ELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHHcc--ccCCCC------------------CcH----HHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000000 000000 001 1223777899999999999999999863
No 251
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.7e-36 Score=317.11 Aligned_cols=192 Identities=22% Similarity=0.303 Sum_probs=161.4
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
...+|++.+.||+|+||.||+|.... ++.||+|+... .....|+.++++++||||+++++++. .....
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLV-----SGAIT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEE-----eCCee
Confidence 34579999999999999999999764 78899997532 23357999999999999999999864 34567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+. ++|.+++.... ..+++.++..|+.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 133 ~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 133 CMVLPHYS-SDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred EEEEEccC-CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcc
Confidence 99999995 58998886533 3489999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCC
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPT 671 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~ 671 (767)
++..... .......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 204 a~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 204 AQFPVVA-------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccC-------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 9743211 1112356899999999999999999999999999999999866554
No 252
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.6e-35 Score=304.83 Aligned_cols=201 Identities=29% Similarity=0.422 Sum_probs=166.7
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|+.+++.++|||++++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 4788899999999999999975 58999999986432 223467889999999999999999999954 456779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||++ ++|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999997 589988865432 24589999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
....... .......++..|+|||++.+. .++.++||||+|+++|+|+||+.||...
T Consensus 149 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 149 RAFGIPV------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred eecCCCc------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 7543211 111223468889999987654 4688999999999999999999999653
No 253
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=341.92 Aligned_cols=259 Identities=28% Similarity=0.371 Sum_probs=203.1
Q ss_pred HHHHhcCCCCCCccccccceEEEEEEe-CCCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 450 LRRATGNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 450 ~~~~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
++..+-+|.....||.|.||.||.|.. .+|...|+|-+... .....+.+.+|..++..++|||+|+++|+ .-
T Consensus 1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV-----Ev 1304 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV-----EV 1304 (1509)
T ss_pred hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce-----ee
Confidence 344566788889999999999999995 45999999987544 23456678899999999999999999998 55
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
+.+.++|.||||++|+|.+.++..+. .++.-...+..|++.|++|||++ |||||||||.||+++.+|.+|+
T Consensus 1305 HRekv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~ 1375 (1509)
T KOG4645|consen 1305 HREKVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKY 1375 (1509)
T ss_pred cHHHHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEe
Confidence 66778999999999999999976543 66666678899999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC---CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK---PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
+|||.|..+..... ..........||+.|||||++.+.. ...++||||+|||+.||+||+.||........-+.+
T Consensus 1376 ~DFGsa~ki~~~~~--~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~ 1453 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQ--TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYH 1453 (1509)
T ss_pred ecccceeEecCchh--cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhH
Confidence 99999988765521 2223344567999999999987643 567899999999999999999999775444333333
Q ss_pred HhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 684 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
-..+..|.- ++-+.++ -++++..|+..||++|.++.|++++
T Consensus 1454 V~~gh~Pq~-P~~ls~~----------------------g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 VAAGHKPQI-PERLSSE----------------------GRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred HhccCCCCC-chhhhHh----------------------HHHHHHHHHhcCchhhhHHHHHHHh
Confidence 222222221 1112222 2235558999999999999988765
No 254
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-35 Score=305.40 Aligned_cols=260 Identities=24% Similarity=0.327 Sum_probs=196.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++. .....+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-----NENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-----cCCEEE
Confidence 56888899999999999999965 48899999886543 334567889999999999999999999964 346779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
+||||+++++|.+++.... .+++..+..++.+++.|+.|||+ . +++||||+|+||++++++.++|+|||+
T Consensus 80 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~---~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVH---RIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhc---CeeccCCCHHHEEECCCCcEEEccCCc
Confidence 9999999999999986543 38999999999999999999997 4 899999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... .....|+..|+|||++.+..++.++|||||||++|++++|+.||.......... ..+.
T Consensus 151 ~~~~~~~~--------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~------~~~~ 216 (284)
T cd06620 151 SGELINSI--------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ------DDPM 216 (284)
T ss_pred ccchhhhc--------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh------hhhh
Confidence 86542211 123458899999999988889999999999999999999999997543321100 0000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
... ..+......... .....+ ....+.+++.+|++.||++|||++|++++.
T Consensus 217 ~~~----~~~~~~~~~~~~-~~~~~~-~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 217 GIL----DLLQQIVQEPPP-RLPSSD-FPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred HHH----HHHHHHhhccCC-CCCchh-cCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 000 011111100000 000000 111233477799999999999999999874
No 255
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-35 Score=300.32 Aligned_cols=248 Identities=27% Similarity=0.358 Sum_probs=193.1
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-----CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-----TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|+..+.||+|++|.||+|... +++.||+|.+.... ....+.+.+|+++++.++|+||+++++++. .+.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCC
Confidence 5788899999999999999976 68999999986543 224567889999999999999999999853 445
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 6799999999999999997543 388999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCC-CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|.+....... ......|+..|+|||.+.... ++.++|+||+|+++|+|++|+.||...... ..........
T Consensus 147 ~~~~~~~~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~ 218 (258)
T cd06632 147 GMAKQVVEFS-------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-AAVFKIGRSK 218 (258)
T ss_pred ccceeccccc-------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-HHHHHHHhcc
Confidence 9987653321 123345788999999987766 899999999999999999999998654311 1111111100
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
........++ ..+.+++.+||+.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~----------------------~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 ELPPIPDHLS----------------------DEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred cCCCcCCCcC----------------------HHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0000111111 112236678999999999999999863
No 256
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3e-35 Score=306.50 Aligned_cols=261 Identities=26% Similarity=0.366 Sum_probs=196.7
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCc----EEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGI----SVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
..+|+..+.||+|+||.||+|.+. ++. .||+|.+..... .....+.+|+.+++.++||||++++++|...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~---- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP---- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC----
Confidence 356788899999999999999864 343 578888754322 2234688999999999999999999987532
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
..++++||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 82 --~~~~v~e~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 82 --TIQLVTQLMPHGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred --CceeeehhcCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 2478999999999999987543 2388999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVE 686 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~ 686 (767)
|||.++........ .......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... ....+..
T Consensus 152 Dfg~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~ 225 (303)
T cd05110 152 DFGLARLLEGDEKE----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLE 225 (303)
T ss_pred cccccccccCcccc----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 99999865432111 11122335678999999988889999999999999999997 88998553211 1112211
Q ss_pred hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHHh
Q 004218 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKILL 756 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 756 (767)
............. . +.+++.+||..+|++||+++|+++.++.+.....
T Consensus 226 ~~~~~~~~~~~~~---------------------~-~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 226 KGERLPQPPICTI---------------------D-VYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred CCCCCCCCCCCCH---------------------H-HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 1110000000111 1 1227778999999999999999999998865544
No 257
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-35 Score=305.74 Aligned_cols=253 Identities=21% Similarity=0.344 Sum_probs=191.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|+||.||+|.+. +++.||+|.+... .......+.+|++++++++||||+++++++. ..+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEE
Confidence 36888999999999999999976 5899999988654 2334567889999999999999999999854 456789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+. .+|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999875421 23489999999999999999999963 18999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCC------CCCcccchhhhHHHHHHHhCCCCCCCcccCCc-chhhHh
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK------PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV-SLVKWV 685 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~ 685 (767)
....... .....++..|+|||.+.+.. ++.++||||+||++|+|++|+.||........ ......
T Consensus 151 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 222 (286)
T cd06622 151 GNLVASL--------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI 222 (286)
T ss_pred ccccCCc--------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH
Confidence 7553221 12234788999999886543 47899999999999999999999964321110 000000
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
....+......+ ...+.+++.+||+.+|++||++++++++
T Consensus 223 ~~~~~~~~~~~~----------------------~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 223 VDGDPPTLPSGY----------------------SDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hhcCCCCCCccc----------------------CHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 000000011101 1112236778999999999999999875
No 258
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.6e-35 Score=312.05 Aligned_cols=201 Identities=26% Similarity=0.346 Sum_probs=168.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+++.. +++.||+|++... .....+.+.+|+.+++.++|+||+++++++ ..+..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 46899999999999999999965 4889999998642 223445688899999999999999999985 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 899999999999999996532 2389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCC-----CCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
++........ .......||+.|+|||++.. ..++.++||||+||++|+|++|+.||..
T Consensus 148 ~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADGT-----VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCCC-----ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 9865432211 11123458999999999863 4578899999999999999999999965
No 259
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.6e-35 Score=300.15 Aligned_cols=204 Identities=27% Similarity=0.391 Sum_probs=169.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-----cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-----GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|++.+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---PME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---CCC
Confidence 47889999999999999999975 489999998753321 224567889999999999999999998542 123
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 46789999999999999987543 278889999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
||.+........ .........|+..|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 150 fg~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 150 FGASKRLQTICL---SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred Cccccccccccc---cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 999975432111 01112234588899999999888899999999999999999999999864
No 260
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.9e-35 Score=304.14 Aligned_cols=262 Identities=27% Similarity=0.376 Sum_probs=198.4
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCc-ccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDF-KNM 528 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 528 (767)
..+++|++.+.||+|++|.||+|..+ +++.|++|++..... ..+.+.+|+.+++++ +|+||+++++++..... ..+
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35689999999999999999999975 478999999865433 346788999999999 79999999999865433 345
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||+|+||+++.++.++|+|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 678999999999999999875431 123489999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCC-----CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
||.+........ ......|+..|+|||++.. ..++.++||||+|+++|+|++|+.||...... .....
T Consensus 157 ~~~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~ 229 (275)
T cd06608 157 FGVSAQLDSTLG------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFK 229 (275)
T ss_pred Cccceecccchh------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHH
Confidence 999875432211 1123458889999998753 34678899999999999999999999643211 11111
Q ss_pred HhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 684 WVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 684 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... .+.. .. ......+.+.+++.+||..||++|||+.|++++
T Consensus 230 ~~~~-~~~~---~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 230 IPRN-PPPT---LK-----------------SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhcc-CCCC---CC-----------------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1100 0000 00 000011223347779999999999999999863
No 261
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=3.5e-35 Score=300.45 Aligned_cols=254 Identities=24% Similarity=0.317 Sum_probs=196.2
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||.|+||.||+|... +++.||+|.+.... ....+.+.+|+++++.++||||+++++++.. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 4788899999999999999965 58899999986432 2335668889999999999999999997642 3445679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH-----NDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
++|||+++++|.+++..... ....+++..++.++.|++.||+||| +. +++||||+|+||++++++.+||+
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 99999999999999976432 1345899999999999999999999 66 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
|||.+........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ....+.+..
T Consensus 153 d~g~~~~~~~~~~------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~ 224 (265)
T cd08217 153 DFGLAKILGHDSS------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIKE 224 (265)
T ss_pred cccccccccCCcc------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHhc
Confidence 9999986543211 01234578999999999988899999999999999999999999865321 111111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
......... ....+.+++.+|++.+|++|||+.|++++
T Consensus 225 ~~~~~~~~~----------------------~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 225 GKFRRIPYR----------------------YSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CCCCCCccc----------------------cCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 110000000 11122237778999999999999999874
No 262
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.2e-35 Score=297.40 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=196.0
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|+..+.||.|+||.||.++.. +++.|++|.+... .....+++.+|++++++++|+||+++++++. +....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 5889999999999999999954 4889999988644 2344567889999999999999999999964 456789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
++|||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 9999999999999997643 23489999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......|+..|+|||...+..++.++||||+|+++|+|++|..||....... .........++..
T Consensus 149 ~~~~~~~~------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 221 (256)
T cd08221 149 KILGSEYS------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN-LVVKIVQGNYTPV 221 (256)
T ss_pred EEcccccc------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCC
Confidence 76533221 1123458899999999988888999999999999999999999985432111 0111111111100
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
...+ .. .+.+++.+||+.+|++||+++|++++.
T Consensus 222 -~~~~------------------~~----~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 -VSVY------------------SS----ELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -cccc------------------CH----HHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0001 11 122366789999999999999998763
No 263
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=9.4e-36 Score=307.87 Aligned_cols=270 Identities=22% Similarity=0.304 Sum_probs=191.5
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||+|.+. +|+.||+|.++... ......+.+|++++++++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 5888899999999999999976 58999999986432 22345678899999999999999999984 4556789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+||+++ +|.+++.... ..+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~-~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCDQ-DLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCCC-CHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 99999974 8888876432 2389999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCC-CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... ......++..|+|||++.+.. ++.++||||+||++|+|++|+.|+.........+..........
T Consensus 147 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07839 147 RAFGIPVR------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTP 220 (284)
T ss_pred hccCCCCC------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCC
Confidence 75432211 112234688999999887644 68999999999999999999998644322211111111000000
Q ss_pred chhhhccHHHHH-----hhhcch--hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQ-----LMMSSE--SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~-----~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. .... +.+.. ...... ....+....+...+.+++.+||+.||.+|||++|++++
T Consensus 221 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 221 T-EESW-PGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred C-hHHh-HHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0 0000 00000 000000 00011111122334457779999999999999999864
No 264
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-35 Score=307.57 Aligned_cols=248 Identities=26% Similarity=0.396 Sum_probs=191.9
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|||++++++.+. .++..++||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv~ 98 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVVM 98 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEEE
Confidence 344467999999999999965 58899999987655555677889999999999999999999854 456779999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++++|.+++.... +++.++..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++...
T Consensus 99 e~~~~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 99 EFLEGGALTDIVTHTR-------MNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred eCCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 9999999999885432 88999999999999999999999 9999999999999999999999999998754
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
..... ......|+..|+|||...+..++.++||||+|+++|||++|+.||...... .....+....+....
T Consensus 169 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~- 239 (292)
T cd06658 169 SKEVP------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIRDNLPPRVK- 239 (292)
T ss_pred ccccc------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCccc-
Confidence 32211 112345889999999998888999999999999999999999998643211 111111111111000
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... ....+.+++.+||..||++|||++|++++
T Consensus 240 ---------------~~~~----~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 ---------------DSHK----VSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ---------------cccc----cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0000 11122336668999999999999999975
No 265
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5e-35 Score=297.57 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=193.5
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|+++++.++|||++++++.+ ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5888999999999999999965 58899999986542 33456788999999999999999999984 3456789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-CceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-MTAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~~kl~Dfg~ 611 (767)
+||||+++++|.+++.... ...+++..+..++.|++.|++|||++ +++||||+|+||+++++ +.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRC----NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 9999999999999997643 23489999999999999999999999 99999999999999854 4689999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+....... ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...........
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~ 219 (256)
T cd08220 149 SKILSSKS-------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--LVLKIMSGTFA 219 (256)
T ss_pred ceecCCCc-------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--HHHHHHhcCCC
Confidence 97654321 1123457889999999998888999999999999999999999986532211 11111110001
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.....+.. .+.+++.+||+.||++|||+.|++++
T Consensus 220 ~~~~~~~~----------------------~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 PISDRYSP----------------------DLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCcCH----------------------HHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11111111 12237778999999999999999864
No 266
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=311.66 Aligned_cols=253 Identities=28% Similarity=0.382 Sum_probs=197.3
Q ss_pred CCCCCCccccccceEEEEEEeCC--C--cEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE--G--ISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~--~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
..+..++||+|.||.|++|.|.. | ..||||.+...... ...+|++|+.+|.+++|||++++||+..+ ..
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QP 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------ch
Confidence 34456789999999999999864 4 36899999766544 67899999999999999999999999643 34
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+.+|||.++.|+|.+.++... ...+.......++.|||.|+.||.++ ++||||+..+|+++-....+||+|||
T Consensus 185 ~mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred hhHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeeccc
Confidence 579999999999999998732 34588889999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
+.+-++........ .....-.+.|+|||.+....++.++|||+|||++|||+| |..||-.... ..+.+.++..-
T Consensus 258 LmRaLg~ned~Yvm---~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~qIL~~iD~~e 332 (1039)
T KOG0199|consen 258 LMRALGENEDMYVM---APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--IQILKNIDAGE 332 (1039)
T ss_pred ceeccCCCCcceEe---cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--HHHHHhccccc
Confidence 99988665433322 122224577999999999999999999999999999998 7788855321 12222222111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
....++.+.+.+++ ++..||..+|++|||+..+.+.+
T Consensus 333 rLpRPk~csedIY~----------------------imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 333 RLPRPKYCSEDIYQ----------------------IMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred cCCCCCCChHHHHH----------------------HHHHhccCCccccccHHHHHHhH
Confidence 11122223333222 66689999999999999997544
No 267
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-36 Score=305.48 Aligned_cols=256 Identities=23% Similarity=0.275 Sum_probs=192.1
Q ss_pred HHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeec--cCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDI--ESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 528 (767)
.-...|++.+.||+||.+.||++...+.+.||+|.+.. .+......|.+|+..|.++ .|.+|+++++| .-.+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY-----Ev~d 432 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDY-----EVTD 432 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeee-----eccC
Confidence 44568999999999999999999988888888887632 2344567899999999999 59999999999 5568
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
+++|+||||= ..+|..++...... ++...+..+.+||+.|+.++|++ ||||.||||.|+++- .|.+||+|
T Consensus 433 ~~lYmvmE~G-d~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLID 502 (677)
T KOG0596|consen 433 GYLYMVMECG-DIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLID 502 (677)
T ss_pred ceEEEEeecc-cccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeee
Confidence 8999999976 45999999876532 33237889999999999999999 999999999999985 46899999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCC-----------CCCCcccchhhhHHHHHHHhCCCCCCCcccC
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-----------KPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 677 (767)
||.|..+..+... -.....+||+.|||||.+... +.++++||||+|||+|+|+.|+.||......
T Consensus 503 FGIA~aI~~DTTs----I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~ 578 (677)
T KOG0596|consen 503 FGIANAIQPDTTS----IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ 578 (677)
T ss_pred echhcccCccccc----eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH
Confidence 9999876554222 223456799999999987532 2567999999999999999999999653221
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...+.........-..++.-. ..+ ++. ++..||..||++|||..|++++
T Consensus 579 ~aKl~aI~~P~~~Iefp~~~~-----------------~~~---li~-~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 579 IAKLHAITDPNHEIEFPDIPE-----------------NDE---LID-VMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHHhhcCCCccccccCCCC-----------------chH---HHH-HHHHHHhcCcccCCCcHHHhcC
Confidence 111111111100000000000 011 222 6778999999999999999874
No 268
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=282.50 Aligned_cols=257 Identities=23% Similarity=0.295 Sum_probs=199.6
Q ss_pred HhcCCCCC-CccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccce
Q 004218 453 ATGNFSHE-NLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 453 ~~~~~~~~-~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 529 (767)
.++.|++. ++||-|-.|.|-.+..+ +|+++|+|++. +.....+|++..-.. .|||||.++++|... +....
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 34556653 57999999999999865 59999999985 224556788876555 699999999997543 56677
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---CCceEE
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE---DMTAKV 606 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~~~~kl 606 (767)
.+.+|||.|+||.|.+.++..+ ...+++.++..|++||+.|+.|||+. +|.||||||+|+|.+. +..+||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g----~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRG----DQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 8899999999999999998766 34599999999999999999999999 9999999999999974 457999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhh
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE 686 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 686 (767)
+|||+|+...+. ......+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||........
T Consensus 206 tDfGFAK~t~~~-------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai------- 271 (400)
T KOG0604|consen 206 TDFGFAKETQEP-------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------- 271 (400)
T ss_pred cccccccccCCC-------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC-------
Confidence 999999865332 223445679999999999999999999999999999999999999976432111
Q ss_pred hhcccchhhhccHHHHHhhhcc-hhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 687 SNFPKNAQQVLDRELRQLMMSS-ESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
++..+..+... ..-...-++++.+..+++|+.+|..+|.+|.|+.|++++
T Consensus 272 -----------spgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 272 -----------SPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred -----------ChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 11111111100 001112345566666678889999999999999998865
No 269
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-37 Score=312.96 Aligned_cols=250 Identities=25% Similarity=0.366 Sum_probs=198.2
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
-|.++..||.|+||.||+|+.++ +-..|.|++...+.+..++++-|++||..++||+||++++.|+ ..+.+||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCceEEE
Confidence 45667789999999999999875 5556789988778888899999999999999999999999853 45678999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
.|||+||-.+.++-... .++++.++..+++|++.||.|||++ .|||||||+.|||++-+|.++|+|||.+..
T Consensus 108 iEFC~GGAVDaimlEL~-----r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELG-----RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EeecCCchHhHHHHHhc-----cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 99999999999886654 4599999999999999999999999 999999999999999999999999999865
Q ss_pred hhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
... .......+.||+.|||||+.. ..+|+.++||||||+++.||..+.+|.....+- ..+.+..+...
T Consensus 180 n~~------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-RVllKiaKSeP 252 (1187)
T KOG0579|consen 180 NKS------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSEP 252 (1187)
T ss_pred chh------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-HHHHHHhhcCC
Confidence 432 223345678999999999854 567999999999999999999999997553221 11222222222
Q ss_pred ccch-hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNA-QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|.-. +.. +..-+.++..+||..||..||++++++++
T Consensus 253 PTLlqPS~----------------------Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 253 PTLLQPSH----------------------WSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CcccCcch----------------------hhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2210 111 11112235558999999999999998865
No 270
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.1e-35 Score=301.49 Aligned_cols=253 Identities=29% Similarity=0.411 Sum_probs=190.0
Q ss_pred CccccccceEEEEEEeCC-------CcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 461 NLIGSGSFGSVYKGYLRE-------GISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|+++++.++||||+++++++. .....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 368999999999998653 2579999875432 244667889999999999999999999864 344579
Q ss_pred EEEeecCCCChhhhhcccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-----ceEE
Q 004218 533 LVYEFLGNGSLGDWIHGERKNE-HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-----TAKV 606 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-----~~kl 606 (767)
+||||+++++|.+++....... ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .++|
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999997543221 234488999999999999999999998 999999999999999877 8999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHh
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~ 685 (767)
+|||++.......... ......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+
T Consensus 153 ~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~ 226 (269)
T cd05044 153 GDFGLARDIYKSDYYR----KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHV 226 (269)
T ss_pred CCcccccccccccccc----cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHH
Confidence 9999997653321111 1122235678999999998899999999999999999998 99998543211 111111
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.......... .....+.+++.+||..+|++||+++++++.|+
T Consensus 227 ~~~~~~~~~~----------------------~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 227 TAGGRLQKPE----------------------NCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred hcCCccCCcc----------------------cchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1100000000 01112233777999999999999999999886
No 271
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=311.62 Aligned_cols=259 Identities=28% Similarity=0.384 Sum_probs=202.5
Q ss_pred CCCCCCccccccceEEEEEEe-CC----CcEEEEEEeec-cCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYL-RE----GISVAVKVLDI-ESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~-~~----~~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
..+.+++||+|+||+||+|.| .+ ..+||+|++.. ...+..++++.|+-+|.+++|||+++++++|....
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~----- 771 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST----- 771 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-----
Confidence 345568999999999999995 33 45799998853 35556789999999999999999999999986533
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
+.||++|++.|+|.++++..+. .+.....+.|..|||+|+.|||++ ++|||||.++||||.+-..+||.||
T Consensus 772 -~qlvtq~mP~G~LlDyvr~hr~-----~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdf 842 (1177)
T KOG1025|consen 772 -LQLVTQLMPLGCLLDYVREHRD-----NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDF 842 (1177)
T ss_pred -HHHHHHhcccchHHHHHHHhhc-----cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEec
Confidence 5799999999999999998764 388899999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|+++.+......... ....-.+.|||-|.+....++.++|||||||++||++| |..|++....++. .+..+..
T Consensus 843 gla~ll~~d~~ey~~----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI--~dlle~g 916 (1177)
T KOG1025|consen 843 GLAKLLAPDEKEYSA----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI--PDLLEKG 916 (1177)
T ss_pred chhhccCcccccccc----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh--hHHHhcc
Confidence 999987654332221 22223567999999999999999999999999999998 8899876443321 1111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHHh
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKILL 756 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~~ 756 (767)
-+ +...+.-..+++. ++.+||..|++.||+++++...+.+..+...
T Consensus 917 eR--------------LsqPpiCtiDVy~--------~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 917 ER--------------LSQPPICTIDVYM--------VMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred cc--------------CCCCCCccHHHHH--------HHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 11 1111111222222 5667999999999999999999988765443
No 272
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.3e-35 Score=305.35 Aligned_cols=200 Identities=28% Similarity=0.362 Sum_probs=168.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|++|.||+|.++ +++.||+|++.... ....+.+.+|++++++++|||++++++++. .+...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 47889999999999999999976 48999999886432 223456789999999999999999999854 45567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++++|..+..... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||+
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 99999999988888765432 389999999999999999999998 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+........ ......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 147 ~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~ 204 (286)
T cd07847 147 ARILTGPGD------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK 204 (286)
T ss_pred ceecCCCcc------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 976543211 1123447888999998876 45789999999999999999999999654
No 273
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.3e-35 Score=297.49 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=191.4
Q ss_pred cCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
..|++.+.||+|+||.||++.. +++.||+|..+.. ...+.+.+|+.++++++|||++++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEEE
Confidence 4688999999999999999975 4788999998643 234678899999999999999999998642 235899
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+..
T Consensus 77 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 77 MELMSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred EECCCCCCHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCcccee
Confidence 99999999999997543 23488999999999999999999998 999999999999999999999999999865
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
..... .....+..|+|||.+.+..++.++||||+|+++|+|++ |+.||...... .........+....
T Consensus 150 ~~~~~---------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 218 (254)
T cd05083 150 GSMGV---------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECVEKGYRMEP 218 (254)
T ss_pred ccccC---------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhCCCCCCC
Confidence 32210 11224567999999988889999999999999999998 99998653221 11111111111100
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
...+ ...+.+++.+||+.+|++||+++++++.|++
T Consensus 219 ~~~~----------------------~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 PEGC----------------------PADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCcC----------------------CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0001 1112237779999999999999999998863
No 274
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.2e-35 Score=300.35 Aligned_cols=254 Identities=22% Similarity=0.364 Sum_probs=193.6
Q ss_pred CCCCCCccccccceEEEEEEe-CCCcEEEEEEeeccCC------cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 456 NFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIEST------GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
+|+..+.||+|++|.||+|.. .+++.||+|++..... ...+.+.+|++++++++|+||+++++++ .+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 478889999999999999996 4589999999864321 1346788999999999999999999995 345
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-ceEEc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-TAKVG 607 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-~~kl~ 607 (767)
+..++||||+++++|.+++.... ++++..+..++.|++.||+|||++ +++|+||+|+||+++.++ .+||+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 67799999999999999997543 388999999999999999999999 999999999999998776 59999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCc-chh-hHh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV-SLV-KWV 685 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~-~~~ 685 (767)
|||.+.......... ........|+..|+|||.+.+..++.++||||+|+++|+|++|..||........ ... ...
T Consensus 147 dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 224 (268)
T cd06630 147 DFGAAARLAAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA 224 (268)
T ss_pred ccccccccccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh
Confidence 999997764431111 1112334578999999999888899999999999999999999999864322111 000 000
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
........+. .+...+.+++.+|+..+|++|||+.|++++
T Consensus 225 ~~~~~~~~~~----------------------~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 225 SATTAPSIPE----------------------HLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred ccCCCCCCch----------------------hhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 0000111111 111222236778999999999999999863
No 275
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.1e-35 Score=306.38 Aligned_cols=248 Identities=26% Similarity=0.383 Sum_probs=191.8
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
|.....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|||++++++++. .+...++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEE
Confidence 334457999999999999965 58999999987555555667889999999999999999999854 456679999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++++|.+++.... +++..++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 98 e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 98 EFLQGGALTDIVSQTR-------LNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred ecCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 9999999999875432 89999999999999999999999 9999999999999999999999999998754
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhh
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQ 695 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (767)
..... ......|+..|+|||++.+..++.++||||+|+++|||++|+.||...... ..........+.....
T Consensus 168 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~ 239 (297)
T cd06659 168 SKDVP------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSPPPKLKN 239 (297)
T ss_pred ccccc------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCCCccc
Confidence 33211 112345889999999999888999999999999999999999998643211 1111111100000000
Q ss_pred hccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 696 VLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 696 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... .+.+++.+||+.+|++||+++|++++
T Consensus 240 ----------------~~~~~~----~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 ----------------AHKISP----VLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ----------------cCCCCH----HHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000011 12236668999999999999999985
No 276
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.7e-36 Score=330.75 Aligned_cols=264 Identities=27% Similarity=0.362 Sum_probs=195.2
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecC------
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSL------ 523 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~------ 523 (767)
+....|+..+.||+||||.||+++.+ ||+.||||++... +......+.+|+..+.+++|||||+++..+...
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45667888899999999999999976 7999999999654 334566788999999999999999998654210
Q ss_pred ------------------------------------------------C-cc----------------------------
Q 004218 524 ------------------------------------------------D-FK---------------------------- 526 (767)
Q Consensus 524 ------------------------------------------------~-~~---------------------------- 526 (767)
. ..
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0 00
Q ss_pred -------------------------------cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 527 -------------------------------NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL 575 (767)
Q Consensus 527 -------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l 575 (767)
....+||-||||+..++.++++..... -.....++++++|++||
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILEGL 710 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHHHH
Confidence 003578999999998888888765421 14667899999999999
Q ss_pred HHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh------hhcC------CCccccccccccCCCCccCcccc
Q 004218 576 DYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL------ERIG------NQSSISSTHVLKGSIGYIPPEYG 643 (767)
Q Consensus 576 ~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~------~~~~------~~~~~~~~~~~~gt~~y~aPE~~ 643 (767)
+|+|++ |||||||||.||+++++..|||+|||+|+... +... ........+..+||.-|+|||++
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998732 1110 11112233557799999999998
Q ss_pred CCCC---CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHH
Q 004218 644 LGEK---PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLI 720 (767)
Q Consensus 644 ~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 720 (767)
.+.. |+.|+|+||+|+|++||+ +||.........+.....+.+|.. ....++.. .
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~------------------~ 845 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEP-ADFFDPEH------------------P 845 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCC-cccccccc------------------h
Confidence 7654 999999999999999998 457554333333333333334433 11111110 0
Q ss_pred HHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 721 TIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 721 ~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
. -.++|.+|++.||++||||.|++.
T Consensus 846 ~-e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 846 E-EASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred H-HHHHHHHHhcCCCccCCCHHHHhh
Confidence 1 112778999999999999999885
No 277
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4e-35 Score=306.08 Aligned_cols=205 Identities=26% Similarity=0.380 Sum_probs=169.2
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||++.... ++.||+|.+.... ....+.+.+|+++++.++||||+++++.+ ..+.+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 368899999999999999999764 7899999986442 23345778999999999999999999985 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 899999999999999996543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCC---------CccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 611 LARSLLERIGN---------QSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 611 ~a~~~~~~~~~---------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.++........ ...........|+..|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~ 218 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 218 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 98642111000 0000111224578899999999888899999999999999999999999854
No 278
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3e-35 Score=300.87 Aligned_cols=254 Identities=23% Similarity=0.351 Sum_probs=196.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|+..+.||+|++|.||+|.++ +++.||+|.+..... ...+++.+|+++++.++||||+++++++. .....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEE
Confidence 36788899999999999999976 588999999865532 34567889999999999999999999854 346789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
+|+||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||++++++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999997643 238999999999999999999999 7 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+........ ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....................
T Consensus 148 ~~~~~~~~~--------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 219 (265)
T cd06605 148 SGQLVNSLA--------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE 219 (265)
T ss_pred chhhHHHHh--------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC
Confidence 876543211 114578899999999988999999999999999999999999865432111111111110000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..... + ... ....+.+++.+||..||++|||+.|++++
T Consensus 220 ~~~~~------------~--~~~----~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 220 PPPRL------------P--SGK----FSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCC------------C--hhh----cCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 00000 0 000 11112337778999999999999999864
No 279
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.2e-35 Score=296.83 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=194.4
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++||||+++++++ ......+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 5888999999999999999965 5889999998643 223446788999999999999999999984 4556789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQR----GVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 9999999999999987543 23478999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
........ ......|+..|+|||+..+..++.++||||||+++|+|++|+.||....... ..........+.
T Consensus 149 ~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~- 220 (256)
T cd08218 149 RVLNSTVE------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN-LVLKIIRGSYPP- 220 (256)
T ss_pred eecCcchh------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH-HHHHHhcCCCCC-
Confidence 76533211 1123457889999999998889999999999999999999999985421110 000111111110
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
... .....+.+++.+||+.+|++||++.|++++
T Consensus 221 ~~~----------------------~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 VSS----------------------HYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred Ccc----------------------cCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000 011122337778999999999999999874
No 280
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.9e-35 Score=307.26 Aligned_cols=258 Identities=26% Similarity=0.330 Sum_probs=195.9
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCc---chhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTG---TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|++|.||+|...+ ++.||+|.+...... ..+.+.+|+++++.++||||+++++.+ ..+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 368889999999999999999764 899999998654322 456788999999999999999999985 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQP----GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCC----CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 899999999999999987543 24489999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCc-----------------------cccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhC
Q 004218 611 LARSLLERIGNQS-----------------------SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG 667 (767)
Q Consensus 611 ~a~~~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg 667 (767)
++........... .........|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 9876533211100 00011234588999999999988899999999999999999999
Q ss_pred CCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC----HHH
Q 004218 668 MSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID----IRE 743 (767)
Q Consensus 668 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt----~~e 743 (767)
+.||....... ................ . +...+.+++.+||..||++||| ++|
T Consensus 229 ~~pf~~~~~~~-~~~~~~~~~~~~~~~~------------------~----~~~~~~~li~~~l~~~p~~R~s~~~~~~~ 285 (316)
T cd05574 229 TTPFKGSNRDE-TFSNILKKEVTFPGSP------------------P----VSSSARDLIRKLLVKDPSKRLGSKRGAAE 285 (316)
T ss_pred CCCCCCCchHH-HHHHHhcCCccCCCcc------------------c----cCHHHHHHHHHHccCCHhHCCCchhhHHH
Confidence 99986532211 1111110000000000 0 1122233677899999999999 777
Q ss_pred HHHH
Q 004218 744 ALRR 747 (767)
Q Consensus 744 vl~~ 747 (767)
++++
T Consensus 286 ll~~ 289 (316)
T cd05574 286 IKQH 289 (316)
T ss_pred HHcC
Confidence 7774
No 281
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.8e-35 Score=301.01 Aligned_cols=258 Identities=22% Similarity=0.338 Sum_probs=195.2
Q ss_pred cCCCCCCccccccceEEEEEEeC------CCcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR------EGISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
.+|++.+.||+|+||.||+|+.+ +.+.||+|.+...... ..+.+.+|++++++++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-----E 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----C
Confidence 57888999999999999999964 2467999988644333 4567899999999999999999999864 3
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCce
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNE---HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA 604 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~ 604 (767)
....++||||+++|+|.+++....... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 455699999999999999997654211 112489999999999999999999999 99999999999999999999
Q ss_pred EEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhh
Q 004218 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVK 683 (767)
Q Consensus 605 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~ 683 (767)
+++|||++....... ........++..|+|||.+.+..++.++||||+|+++|++++ |..||...... ....
T Consensus 157 ~l~~~~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~ 229 (275)
T cd05046 157 KVSLLSLSKDVYNSE-----YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLN 229 (275)
T ss_pred EEcccccccccCccc-----ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHH
Confidence 999999986442211 111122345678999999888888999999999999999999 77888543211 1111
Q ss_pred Hhhh-hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 684 WVES-NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 684 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.... ..+......++ ..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 230 ~~~~~~~~~~~~~~~~----------------------~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 230 RLQAGKLELPVPEGCP----------------------SRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHcCCcCCCCCCCCC----------------------HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 1110 00000001111 12233777899999999999999999875
No 282
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.2e-35 Score=312.31 Aligned_cols=282 Identities=21% Similarity=0.261 Sum_probs=201.8
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.++|++.+.||+|+||.||+|.+. +|+.||+|.+.... ......+.+|+.++++++||||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999965 58999999986432 2344668889999999999999999998776555556678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++|+||+++ ++.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~~-~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhccc-CHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 999999975 888887643 289999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
+.......... .......|+..|+|||.+.+ ..++.++||||+|+++|+|++|+.||...... .....+.....
T Consensus 153 ~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~ 227 (336)
T cd07849 153 ARIADPEHDHT---GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLG 227 (336)
T ss_pred eeecccccccc---CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcC
Confidence 97653321111 11123468899999998654 46789999999999999999999999543211 11111111111
Q ss_pred ----cchhhhccHHHHHhhhcchh----hHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHHH
Q 004218 691 ----KNAQQVLDRELRQLMMSSES----QTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR--LKNA 751 (767)
Q Consensus 691 ----~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~ 751 (767)
.......+...+......+. ...+........+.+++.+||+.||++|||+.|++++ ++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred CCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 11111111111111100000 0000111112233448889999999999999999987 5443
No 283
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2e-35 Score=311.32 Aligned_cols=201 Identities=24% Similarity=0.312 Sum_probs=169.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+++.. +++.||+|++... .......+.+|..++..++|++|+++++++ ...+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 47899999999999999999976 4888999998642 222345577899999999999999999985 45567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.|+||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 899999999999999997632 2389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCC-----CCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-----EKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
++........ .......||+.|+|||++.+ +.++.++||||+|+++|+|++|+.||..
T Consensus 148 ~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDGT-----VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCCc-----eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 9976532211 11123468999999998875 4678899999999999999999999965
No 284
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.6e-35 Score=300.84 Aligned_cols=255 Identities=25% Similarity=0.295 Sum_probs=180.1
Q ss_pred CccccccceEEEEEEeCC---CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLRE---GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||+|.... ...+|+|.+..... .....+.+|+++++.++||||+++++++. .....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 368999999999997543 45788887754332 23456789999999999999999999864 3455799999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++...+... ....++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||.+....
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999997654211 12356788899999999999999999 99999999999999999999999999986532
Q ss_pred hhcCCCccccccccccCCCCccCccccCC-------CCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLG-------EKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
..... .......++..|+|||++.. ..++.++||||+||++|||++ |..||....... .........
T Consensus 152 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~ 226 (269)
T cd05042 152 PEDYY----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQ 226 (269)
T ss_pred cchhe----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhcc
Confidence 21110 01122345678999998642 356889999999999999999 778875432211 111111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
.........+ ......+..++..|| .||++|||++||++.|
T Consensus 227 ~~~~~~~~~~------------------~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 227 DIKLPKPQLD------------------LKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CccCCCCccc------------------ccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 0000000000 001111122555687 5999999999999887
No 285
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.2e-35 Score=301.87 Aligned_cols=261 Identities=23% Similarity=0.336 Sum_probs=197.0
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|+..+.||.|++|.||+|.+. +++.||+|.+..... ....++.+|+++++.++||||+++++++.. .....++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 36788899999999999999975 488999999864432 345678999999999999999999998753 2345679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 99999999999998764322 134488999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCC---cchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE---VSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~ 689 (767)
....... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... .....+.....
T Consensus 153 ~~~~~~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T cd06621 153 GELVNSL--------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP 224 (287)
T ss_pred ccccccc--------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC
Confidence 6543221 123347888999999998889999999999999999999999997542211 11111111100
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... .......... ...+.+++.+||+.+|++|||+.|++++
T Consensus 225 ~~~~------------~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 225 NPEL------------KDEPGNGIKW----SEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred chhh------------ccCCCCCCch----HHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0000 0000000011 1223347779999999999999999884
No 286
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.2e-35 Score=311.26 Aligned_cols=201 Identities=26% Similarity=0.330 Sum_probs=168.0
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+++.+. ++.||+|++... .......+.+|+.++..++|++|+++++++ .+...
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 368899999999999999999764 788999998532 222334577899999999999999999985 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 899999999999999997532 2389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
++........ .......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 148 SCLKLMEDGT-----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred hheecccCCc-----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 9875432211 1112346899999999886 34578899999999999999999999965
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-34 Score=294.68 Aligned_cols=251 Identities=31% Similarity=0.513 Sum_probs=192.5
Q ss_pred CCCCCccccccceEEEEEEeCC-----CcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-----GISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
+++.+.||.|+||.||++.+.+ +..||+|.+...... ..+.+.+|+++++.++|+||+++++++. ..+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCe
Confidence 4567899999999999999764 388999998654433 5678899999999999999999999864 3356
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.+++|||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++|+|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP----KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh----ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 7999999999999999976432 1289999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
.+........... ....++..|+|||.+.+..++.++||||+|+++|+|++ |+.||..... ...........
T Consensus 149 ~~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~ 221 (258)
T smart00219 149 LSRDLYDDDYYKK-----KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGY 221 (258)
T ss_pred Cceeccccccccc-----ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCC
Confidence 9976644311111 11226789999999988889999999999999999998 7788754211 11111111111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
........+ . .+.+++.+|+..||++|||+.|+++.|
T Consensus 222 ~~~~~~~~~------------------~----~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 RLPKPENCP------------------P----EIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCCCcCC------------------H----HHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111111111 1 122266789999999999999998764
No 288
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.5e-35 Score=300.61 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=187.3
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHH-HhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEA-LRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|+||.||+|.+. +|+.||+|+++.... ....++..|+.. ++..+|||++++++++. .+...
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 36889999999999999999976 589999999865432 233456666665 56678999999999964 34567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||++ |+|.+++...... ...+++..++.++.|++.|++|||++. +++||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999997 5898888653321 245899999999999999999999742 899999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC----CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG----EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
+....... ......|+..|+|||.+.+ ..++.++|+||+||++|+|++|+.||................
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~ 223 (283)
T cd06617 151 SGYLVDSV-------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE 223 (283)
T ss_pred cccccccc-------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc
Confidence 97653221 1122357889999998765 446889999999999999999999985422211111111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..+...... +...+.+++.+||..+|++||+++|++++
T Consensus 224 ~~~~~~~~~----------------------~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 224 PSPQLPAEK----------------------FSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCCCccc----------------------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011000000 11112236778999999999999999874
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.5e-34 Score=295.58 Aligned_cols=254 Identities=30% Similarity=0.393 Sum_probs=194.6
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCc--chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG--TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|+++++.++|+||+++++++ ......+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 5888999999999999999965 5889999998755443 567889999999999999999999984 3456679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999999999997543 378899999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCC---CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK---PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
........... .......++..|+|||++.+.. ++.++||||||+++|++++|+.||........ .........
T Consensus 147 ~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~ 223 (264)
T cd06626 147 VKLKNNTTTMG--EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVGAGH 223 (264)
T ss_pred cccCCCCCccc--ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHhcCC
Confidence 87644322111 0012345788999999988766 78999999999999999999999965321111 111111100
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
+...+... .. ...+.+++.+||+.+|.+|||+.|++.
T Consensus 224 ~~~~~~~~----------------~~----~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 224 KPPIPDSL----------------QL----SPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCccc----------------cc----CHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00 111123677899999999999999875
No 290
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=7.8e-35 Score=300.99 Aligned_cols=272 Identities=25% Similarity=0.332 Sum_probs=192.9
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|+..+.||.|++|.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++ .++...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 4788999999999999999975 58899999886442 22345788999999999999999999985 3456679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+. ++|.+++.... ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASP----LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999996 58999886543 23489999999999999999999998 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCC-CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh-cc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN-FP 690 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~ 690 (767)
........ ......++..|+|||++.+.. ++.++||||||+++|+|+||+.||....... ...+..... .+
T Consensus 148 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~ 220 (284)
T cd07860 148 RAFGVPVR------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTP 220 (284)
T ss_pred hhcccCcc------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 75532211 112234678899999876644 5889999999999999999999986532211 111111100 00
Q ss_pred cc-hhhhcc--HHHHHhhhcch-hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KN-AQQVLD--RELRQLMMSSE-SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~-~~~~~~--~~l~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. ...... +.....+.... .........+...+.+++.+||+.||++|||++|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 221 DEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred ChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 00 000000 00000000000 00001111122233447889999999999999999864
No 291
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.4e-34 Score=295.70 Aligned_cols=252 Identities=26% Similarity=0.391 Sum_probs=197.8
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|++|.||+|.... ++.||+|++..... ...+.+.+|++++++++|+|++++++++. .+...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 368889999999999999999775 89999999865543 44678899999999999999999999854 446779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
+||||+++++|.+++.... .+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|+|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999997643 38999999999999999999999 8 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc-CCcchhhHhhhhcc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA-GEVSLVKWVESNFP 690 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~ 690 (767)
+......... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ........+.....
T Consensus 147 ~~~~~~~~~~------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (264)
T cd06623 147 SKVLENTLDQ------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP 220 (264)
T ss_pred ceecccCCCc------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC
Confidence 9765332211 1234578899999999988899999999999999999999999866432 11111111111110
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... . ....+.+++.+||+.+|++|||+.|++++
T Consensus 221 ~~~~~~-----------------~----~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAE-----------------E----FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcc-----------------c----CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 000000 0 11122236678999999999999999885
No 292
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.2e-35 Score=296.58 Aligned_cols=237 Identities=29% Similarity=0.436 Sum_probs=182.3
Q ss_pred CccccccceEEEEEEeCC-C----------cEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 461 NLIGSGSFGSVYKGYLRE-G----------ISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+.||+|+||.||+|.+.+ + ..|++|.+...... ...+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 468999999999999764 3 25788877544333 6788899999999999999999998753 3
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-------
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM------- 602 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~------- 602 (767)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 34899999999999999976542 489999999999999999999998 999999999999999887
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCC--CCCCcccchhhhHHHHHHHh-CCCCCCCcccCCc
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE--KPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEV 679 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~ 679 (767)
.+||+|||.+..... .....++..|+|||++.+. .++.++||||+|+++|++++ |..||.......
T Consensus 146 ~~kl~Dfg~a~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~- 214 (259)
T cd05037 146 FIKLSDPGIPITVLS----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE- 214 (259)
T ss_pred eEEeCCCCccccccc----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh-
Confidence 799999999976432 1223467789999998876 78999999999999999999 567775532111
Q ss_pred chhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 680 SLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
...+...... .... .. ..+.+++.+||..+|.+|||+.|+++.|
T Consensus 215 -~~~~~~~~~~--~~~~--------------~~--------~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 215 -KERFYQDQHR--LPMP--------------DC--------AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -HHHHHhcCCC--CCCC--------------Cc--------hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1111100000 0000 00 1122377799999999999999999876
No 293
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.8e-34 Score=295.53 Aligned_cols=261 Identities=26% Similarity=0.363 Sum_probs=198.5
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||.|+||.||+|... ++..||+|++.... ....+.+.+|+++++.++|+|++++++.+. .+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 46899999999999999999965 58899999986432 235677899999999999999999999853 456679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.++++.... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 76 iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 99999999999999976432 13489999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
..+........ .......|+..|+|||++... .++.++||||||+++|+|++|+.||....... ...+......+.
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~ 226 (267)
T cd06610 150 ASLADGGDRTR--KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQNDPPS 226 (267)
T ss_pred HHhccCccccc--cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCCCCC
Confidence 87654322210 112334588999999998776 78999999999999999999999996543221 111111111110
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... ...+...+.+++.+||..||++|||+.|++++
T Consensus 227 -~~~~~~-----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 227 -LETGAD-----------------YKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred -cCCccc-----------------cccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000 00111122237778999999999999999864
No 294
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.3e-34 Score=298.91 Aligned_cols=249 Identities=26% Similarity=0.375 Sum_probs=192.5
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.|...+.||+|++|.||++... +++.||+|++........+.+.+|+.+++.++|||++++++++. .....++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 3555679999999999999964 58899999986555455567889999999999999999999854 44567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
+||+++++|.+++...+ +++.++..++.|++.|++|||++ +++||||+|+||+++.++.++|+|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHTR-------MNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 99999999999987632 89999999999999999999999 999999999999999999999999998875
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
...... ......|+..|+|||...+..++.++||||+|+++|+|++|+.||...... ..........+....
T Consensus 165 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~ 236 (285)
T cd06648 165 VSKEVP------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIRDNLPPKLK 236 (285)
T ss_pred hccCCc------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHhcCCCCCc
Confidence 432211 112345889999999998888999999999999999999999998542211 111111111000000
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. ..... ..+.+++.+||+.+|++|||+.|++++
T Consensus 237 ~----------------~~~~~----~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 237 N----------------LHKVS----PRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred c----------------cccCC----HHHHHHHHHHcccChhhCcCHHHHccC
Confidence 0 00001 112337778999999999999999863
No 295
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-34 Score=300.39 Aligned_cols=197 Identities=31% Similarity=0.432 Sum_probs=171.2
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||++.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++ ..+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 46889999999999999999976 48999999986432 23456788999999999999999999985 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 799999999999999987643 389999999999999999999998 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++...... .....|++.|+|||.+.+...+.++||||+|+++|+|++|+.||...
T Consensus 147 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 201 (290)
T cd05580 147 FAKRVKGR---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD 201 (290)
T ss_pred CccccCCC---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 99765332 12345889999999998888899999999999999999999998653
No 296
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-34 Score=297.06 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=192.6
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
-|++.+.||+|+||.||+|.+. +++.||+|...... ....+.+.+|+.++++++||||+++++++. .+...++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEEE
Confidence 4778889999999999999865 58899999885432 234467889999999999999999999854 4566799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus 80 v~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~ 149 (277)
T cd06641 80 IMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAG 149 (277)
T ss_pred EEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccce
Confidence 99999999999998643 289999999999999999999998 99999999999999999999999999987
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
....... ......++..|+|||.+.+..++.++||||+||++|+|++|..||...... .....+....+...
T Consensus 150 ~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 221 (277)
T cd06641 150 QLTDTQI------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPKNNPPTL 221 (277)
T ss_pred ecccchh------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhcCCCCCC
Confidence 5432211 112345788999999998888899999999999999999999998643211 11111111111111
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...++ ..+.+++.+||+.+|.+||++.+++++
T Consensus 222 ~~~~~----------------------~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 222 EGNYS----------------------KPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CcccC----------------------HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11111 112237778999999999999999995
No 297
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7e-35 Score=301.79 Aligned_cols=199 Identities=27% Similarity=0.379 Sum_probs=168.3
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||+|.+. +|+.||+|++.... ....+.+.+|+.++++++|||++++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence 5888999999999999999975 58999999986543 334567889999999999999999999854 456779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+ +++|.+++.... ..+++.+++.++.|++.||+|||+. +++|+||||+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 999999987543 3489999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
........ .......|+..|+|||.+.+. .++.++||||+|+++|+|++|++||..
T Consensus 147 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~ 203 (286)
T cd07832 147 RLFSEEEP-----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPG 203 (286)
T ss_pred ccccCCCC-----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCC
Confidence 76543211 111234588999999988654 468999999999999999999887754
No 298
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=9.5e-35 Score=301.37 Aligned_cols=202 Identities=28% Similarity=0.441 Sum_probs=165.8
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+++++.++|+||+++++++. .+..
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCe
Confidence 4578999999999999999999865 588999999865432 23346788999999999999999999854 4456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||++ +++.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 799999996 68877765432 2378888999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.++....... ......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||+..
T Consensus 149 ~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 149 LARAKSIPSQ------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred cccccCCCCC------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 9875422111 11223468899999998754 4788999999999999999999999754
No 299
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.6e-34 Score=297.13 Aligned_cols=242 Identities=23% Similarity=0.308 Sum_probs=178.7
Q ss_pred ccccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHHh---cCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 462 LIGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEALR---NTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~---~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.||+|+||.||++... +++.||+|.+..... .....+.+|..+++ ..+||+++.+++++. ..+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 4899999999999975 488999998864321 11233445544433 347999999998854 34567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999987543 389999999999999999999999 999999999999999999999999999865
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
..... .....|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||..................+...
T Consensus 147 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 218 (279)
T cd05633 147 FSKKK--------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL 218 (279)
T ss_pred ccccC--------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC
Confidence 43211 122358999999998864 567899999999999999999999996543221111111110011111
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
+..++ ..+.+++.+||+.||++|| |++|++++
T Consensus 219 ~~~~~----------------------~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 219 PDSFS----------------------PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccccC----------------------HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 11111 1122366689999999999 69999886
No 300
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-34 Score=296.50 Aligned_cols=253 Identities=26% Similarity=0.386 Sum_probs=192.5
Q ss_pred CCCCCCccccccceEEEEEEeCC--CcEEEEEEeeccC----------CcchhhHHHHHHHHhc-CCCCCceeEEeeeec
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE--GISVAVKVLDIES----------TGTWKSFFAECEALRN-TRHRNLVKLITSCSS 522 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~ 522 (767)
.|++.+.||+|+||.||+|.+.. ++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47888999999999999999765 6889999875321 1223457788888865 79999999999854
Q ss_pred CCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCC
Q 004218 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDED 601 (767)
Q Consensus 523 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~ 601 (767)
.++..++||||+++++|.+++...... ...+++..++.++.|++.|+.|||+ . +++||||+|+||+++++
T Consensus 80 ----~~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 80 ----ENDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGED 150 (269)
T ss_pred ----cCCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCC
Confidence 456779999999999999988543211 2348999999999999999999996 5 89999999999999999
Q ss_pred CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcch
Q 004218 602 MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 681 (767)
+.+||+|||.+....... ......|+..|+|||...+..++.++||||||+++|+|++|+.||...... ..
T Consensus 151 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~--~~ 221 (269)
T cd08528 151 DKVTITDFGLAKQKQPES-------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML--SL 221 (269)
T ss_pred CcEEEecccceeeccccc-------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH--HH
Confidence 999999999997643321 123345888999999999888999999999999999999999998543211 11
Q ss_pred hhHh-hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 682 VKWV-ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 682 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.... ...++........ ..+.+++.+||+.||++||++.|+.++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~----------------------~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 222 ATKIVEAVYEPLPEGMYS----------------------EDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHHhhccCCcCCcccCC----------------------HHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111 1111100000111 11223777899999999999999999875
No 301
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.2e-35 Score=301.93 Aligned_cols=200 Identities=29% Similarity=0.446 Sum_probs=166.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
++|++.+.||+|++|.||+|..+ +++.||+|.+..... .....+.+|++++++++||||+++++++. .+...+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeEE
Confidence 67899999999999999999976 588999999864432 22345678999999999999999999854 456779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++ +|.+++.... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 80 lv~e~~~~-~L~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred EEEecCCC-CHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 99999975 9999887543 2489999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+....... ......++..|+|||++.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 151 ~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 151 RAKSVPSK------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred cccCCCCc------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 64321110 0112236788999998865 45789999999999999999999999654
No 302
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.9e-34 Score=298.21 Aligned_cols=254 Identities=24% Similarity=0.358 Sum_probs=197.8
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
...+.|++.+.+|+|++|.||+|.+. ++..||+|++..... ..+.+.+|+++++.++|+|++++++++. ....
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYL-----VGDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEE-----ECCE
Confidence 34567888999999999999999976 588999999975444 5677889999999999999999999864 3466
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. |++|+||+|+||+++.++.++|+|||
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccc
Confidence 799999999999999998753 2499999999999999999999998 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFP 690 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 690 (767)
.+........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||....... ..........+
T Consensus 162 ~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~~~~~~~~ 234 (286)
T cd06614 162 FAAQLTKEKS------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFLITTKGIP 234 (286)
T ss_pred hhhhhccchh------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCC
Confidence 9875533211 1123347889999999988889999999999999999999999985432111 01111110010
Q ss_pred cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 691 KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 691 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. ... ...+...+.+++.+||+.+|.+|||+.|++++
T Consensus 235 ~-~~~--------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 235 P-LKN--------------------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred C-Ccc--------------------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0 000 00011122337778999999999999999864
No 303
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=9.4e-35 Score=298.35 Aligned_cols=255 Identities=26% Similarity=0.391 Sum_probs=190.1
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCc----------chhhHHHHHHHHhcCCCCCceeEEeeeecCC
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG----------TWKSFFAECEALRNTRHRNLVKLITSCSSLD 524 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 524 (767)
+|.+.+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|+.+++.++|||++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 5778899999999999999865 5889999987532111 1245778999999999999999999854
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCce
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA 604 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~ 604 (767)
.....++||||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.+
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 3456799999999999999997643 389999999999999999999998 99999999999999999999
Q ss_pred EEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC--CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchh
Q 004218 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK--PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682 (767)
Q Consensus 605 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 682 (767)
+|+|||.++........ .......|+..|+|||.+.... ++.++||||+|+++|++++|..||....... ...
T Consensus 148 ~l~d~~~~~~~~~~~~~----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~ 222 (272)
T cd06629 148 KISDFGISKKSDDIYDN----DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-AMF 222 (272)
T ss_pred EEeeccccccccccccc----cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-HHH
Confidence 99999999754322111 1122345788999999987654 7899999999999999999999985421110 000
Q ss_pred hHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 683 KWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
........... ... ....+...+.+++.+||..+|++|||++|++++
T Consensus 223 ~~~~~~~~~~~----~~~--------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 223 KLGNKRSAPPI----PPD--------------VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred HhhccccCCcC----Ccc--------------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00000000000 000 000111223336778999999999999999874
No 304
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.2e-34 Score=296.48 Aligned_cols=255 Identities=24% Similarity=0.344 Sum_probs=178.3
Q ss_pred CccccccceEEEEEEeCCC---cEEEEEEeeccC-CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 461 NLIGSGSFGSVYKGYLREG---ISVAVKVLDIES-TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.|.. ....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEe
Confidence 3699999999999985433 346677665432 2345688999999999999999999998653 345699999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
|+++|+|.+++...... ....++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999764321 22367778889999999999999998 99999999999999999999999999985422
Q ss_pred hhcCCCccccccccccCCCCccCccccCC-------CCCCCcccchhhhHHHHHHHh-CCCCCCCcccCCcchhhHhhhh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLG-------EKPSTAGDVYSFGVMLLEIFT-GMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 688 (767)
.... ........++..|+|||++.. ..++.++||||||+++|||++ |..||...... ..+.......
T Consensus 151 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~ 225 (268)
T cd05086 151 KEDY----IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIKDQ 225 (268)
T ss_pred cchh----hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhhc
Confidence 1110 011123457889999998753 235789999999999999997 46677542211 1111111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
... ..++.+ .....+.+ .+++..|| .+|++||+++|+++.|.
T Consensus 226 ~~~----~~~~~~----------~~~~~~~~----~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 226 QVK----LFKPQL----------ELPYSERW----YEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccc----cCCCcc----------CCCCcHHH----HHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 000 000000 00011111 22555788 67999999999998873
No 305
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=308.97 Aligned_cols=210 Identities=35% Similarity=0.435 Sum_probs=173.6
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-cccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~ 531 (767)
..|...+.||+|+||.||+|+++ +|+.||||.+... .....+...+|++++++++|||||+++++-.... .......
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 45666788999999999999965 5999999999654 3345567889999999999999999998732211 0012345
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC--CCC--ceEEc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD--EDM--TAKVG 607 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~--~~~--~~kl~ 607 (767)
.+|||||.||||...++.... ..++++.+.+.++.+++.||.|||++ |||||||||.||++- .+| ..||+
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN---~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPEN---AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred eEEEeecCCCcHHHHhcCccc---ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeee
Confidence 799999999999999976443 45699999999999999999999999 999999999999984 333 58999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccC-CCCCCCcccchhhhHHHHHHHhCCCCCCCcccC
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL-GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 677 (767)
|||.|+.++++. .....+||..|.+||.+. .+.|+..+|.|||||++|+++||..||......
T Consensus 167 DfG~Arel~d~s-------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 167 DFGAARELDDNS-------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred cccccccCCCCC-------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 999999875542 345678999999999988 478899999999999999999999999665443
No 306
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=9.6e-35 Score=302.53 Aligned_cols=270 Identities=23% Similarity=0.284 Sum_probs=192.3
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCc-----chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG-----TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|++.+.||+|++|.||+|.+. +++.||+|.+...... ....+.+|++++++++|+||+++++++. +..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 4788899999999999999975 5899999998654322 3445678999999999999999999964 356
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+ +|+|.+++.... ..+++.++..++.|+++||+|||++ +|+||||+|+||+++.++.++|+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 779999999 889999997543 2489999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|.++....... ......++..|+|||.+.+ ..++.++||||+||++|||++|.+||...... ....+... .
T Consensus 147 g~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~-~ 218 (298)
T cd07841 147 GLARSFGSPNR------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFE-A 218 (298)
T ss_pred eeeeeccCCCc------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHH-H
Confidence 99976543211 1122346788999998754 45788999999999999999998777543221 11111110 0
Q ss_pred cccchhhhccH-----HHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDR-----ELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+.......... .......................+.+++.+||+.||++|||++|++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 219 LGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000000 000000000000001111112233347889999999999999999984
No 307
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.9e-35 Score=296.36 Aligned_cols=199 Identities=30% Similarity=0.391 Sum_probs=172.1
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
+|++.+.||.|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++.+ ..+...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 5888999999999999999976 48999999986442 23457888999999999999999999884 456678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++|+||+++++|.+++.... .+++.++..++.|+++||.|||+. +++|+||+|+||++++++.++|+|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 99999999999999997642 389999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
+....... ......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||....
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 147 ATKVTPDT-------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred ccccCCCc-------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 97653321 1123457889999999988889999999999999999999999987543
No 308
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2e-34 Score=306.98 Aligned_cols=204 Identities=25% Similarity=0.347 Sum_probs=170.5
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-ccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKN 527 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 527 (767)
...++|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+.+++.++||||+++++++.... ..+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 34578999999999999999999965 5899999998543 2334456778999999999999999999875432 233
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....++||||+++ +|.+.+... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 4567999999965 888887531 78889999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|||.++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...
T Consensus 161 Dfg~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 161 DFGLARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred cCccceeCCCCC-------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 999997653321 112345788999999999999999999999999999999999998653
No 309
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=279.43 Aligned_cols=201 Identities=30% Similarity=0.406 Sum_probs=174.9
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
.+.|...++||+|.||.|-+++-+ +++.+|+|+++++. .+....-+.|-++|+..+||.+..+-.. +...+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 457888899999999999999955 59999999997653 2334455678999999999999887665 66778
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
++|+||||+.||.|.-++...+. +++.....+-..|..||.|||++ +||.||+|.+|.++|.+|++||+||
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~------FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERV------FSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhc------ccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeec
Confidence 89999999999999998877553 89999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|+++.-- .....+..++||+.|+|||++....|+.++|+|.+|+++|||++|+.||...
T Consensus 313 GLCKE~I------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 313 GLCKEEI------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ccchhcc------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 9997532 2233456789999999999999999999999999999999999999999653
No 310
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.4e-34 Score=296.19 Aligned_cols=248 Identities=23% Similarity=0.364 Sum_probs=191.2
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-CCcchhhHHHHHHHHhcCC---CCCceeEEeeeecCCccccee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-STGTWKSFFAECEALRNTR---HRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 530 (767)
.|+..+.||+|+||.||+|.+. +++.||+|.+... .....+++.+|+.+++.++ |||++++++++. .+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 4778899999999999999964 5899999998654 3344567889999999986 999999999854 4456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||+|+||++++++.++|+|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 79999999999999998653 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
.+........ ......|+..|+|||.+.++ .++.++||||||+++|+|++|+.||........ ........
T Consensus 147 ~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~ 218 (277)
T cd06917 147 VAALLNQNSS------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA--MMLIPKSK 218 (277)
T ss_pred ceeecCCCcc------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh--hhccccCC
Confidence 9976543221 11234588899999987654 468899999999999999999999965322110 00110000
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+..... . . ....+.+++.+||+.||++||++.|++++
T Consensus 219 ~~~~~~---~--------------~----~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLED---N--------------G----YSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCc---c--------------c----CCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 100000 0 0 01112237778999999999999999874
No 311
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=9.9e-39 Score=310.72 Aligned_cols=368 Identities=29% Similarity=0.464 Sum_probs=249.2
Q ss_pred CCccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEe
Q 004218 2 TSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYN 81 (767)
Q Consensus 2 ~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 81 (767)
..|++|++++|+++ ++|..+++ +..++.|+.++|++. ++|..+.++.+|..|+.++|.+. .+|+.++.+..|+.|+
T Consensus 68 ~~l~vl~~~~n~l~-~lp~aig~-l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~ 143 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPAAIGE-LEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLD 143 (565)
T ss_pred cceeEEEeccchhh-hCCHHHHH-HHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhh
Confidence 45677777777777 77777774 677777777777777 67777777777777777777776 6666677777777777
Q ss_pred ecCccccCCCCCCc----------------cccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCccccc
Q 004218 82 IGFNKIVGSGDEGL----------------SFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGK 145 (767)
Q Consensus 82 l~~n~l~~~~~~~~----------------~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~ 145 (767)
..+|++.+.|.+.. ..+...-++++|+.||+..|-++ .+|..++.+.+ |+-|||..|+|. .
T Consensus 144 ~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~-L~~LyL~~Nki~-~ 220 (565)
T KOG0472|consen 144 ATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLES-LELLYLRRNKIR-F 220 (565)
T ss_pred ccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhh-hHHHHhhhcccc-c
Confidence 77776664432211 12222333455555555555555 55555555555 555555555555 3
Q ss_pred CCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCc
Q 004218 146 IPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNF 225 (767)
Q Consensus 146 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 225 (767)
+| .|.++..|++|+++.|.|.........++++|.+|||.+|++. ..|..+.-+.+|..||+|+|.|++ .|..++++
T Consensus 221 lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgnl 297 (565)
T KOG0472|consen 221 LP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGNL 297 (565)
T ss_pred CC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCcccccc
Confidence 34 3444444444444444444222222335566666666666666 556666666666666666666653 45555665
Q ss_pred cccccccccCcccCC-----------------------------------------------------------------
Q 004218 226 QNLLSIDLSNNKLNG----------------------------------------------------------------- 240 (767)
Q Consensus 226 ~~L~~L~l~~n~l~~----------------------------------------------------------------- 240 (767)
+|+.|-+.+|.+..
T Consensus 298 -hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~ 376 (565)
T KOG0472|consen 298 -HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTL 376 (565)
T ss_pred -eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccccc
Confidence 56666665555430
Q ss_pred -------------------------CCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCccc
Q 004218 241 -------------------------NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSF 295 (767)
Q Consensus 241 -------------------------~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~ 295 (767)
++|..+..+..+.+.+.+++|.++ .+|..++.+++|+.|+|++|.+. .+|..+
T Consensus 377 VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~ 454 (565)
T KOG0472|consen 377 VPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEM 454 (565)
T ss_pred CCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhh
Confidence 222222222233333344444444 66778889999999999999998 688889
Q ss_pred ccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCCccccccccc
Q 004218 296 KNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMV 375 (767)
Q Consensus 296 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 375 (767)
+.+..|+.|++++|++. ..|..+..+..|+.+-.++|++....|..+..|.+|.+|||.+|.++.+||..+.+.+++.+
T Consensus 455 ~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hL 533 (565)
T KOG0472|consen 455 GSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHL 533 (565)
T ss_pred hhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEE
Confidence 99999999999999998 88988888888899989999999777777999999999999999999999999999999999
Q ss_pred cccCCcCc
Q 004218 376 HLEGNPKL 383 (767)
Q Consensus 376 ~l~~Np~~ 383 (767)
.+.|||..
T Consensus 534 eL~gNpfr 541 (565)
T KOG0472|consen 534 ELDGNPFR 541 (565)
T ss_pred EecCCccC
Confidence 99999964
No 312
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.9e-34 Score=304.87 Aligned_cols=280 Identities=21% Similarity=0.265 Sum_probs=200.5
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 378999999999999999999965 58999999986432 234567788999999999999999998765432 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||++ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 899999996 59999886543 289999999999999999999998 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh--
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES-- 687 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-- 687 (767)
.+.......... ........|+..|+|||.+.+ ..++.++||||+|+++|||++|+.||....... ....+..
T Consensus 153 ~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~~~ 228 (334)
T cd07855 153 MARGLSSSPTEH--KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILSVL 228 (334)
T ss_pred cceeecccCcCC--CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHHHh
Confidence 997654322111 111123468899999998765 457899999999999999999999996532211 1111111
Q ss_pred -hcccc-hhhhccHHHHHhhhcc----hhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 688 -NFPKN-AQQVLDRELRQLMMSS----ESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 688 -~~~~~-~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
..+.. ........+....... ..............+.+++.+||+.+|.+|||+++++.+-
T Consensus 229 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 229 GSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred CCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 11111 1111111111111110 0000111111223344578899999999999999998854
No 313
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.8e-35 Score=307.26 Aligned_cols=284 Identities=21% Similarity=0.256 Sum_probs=201.3
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.++|.+.+.||+|+||.||+|... +++.||||.+... .......+.+|+.+++.++||||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467999999999999999999965 5899999988643 2334456778999999999999999999876543333456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+. ++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999996 68998886543 389999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCc-c-hhhHhhh
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV-S-LVKWVES 687 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~-~~~~~~~ 687 (767)
+++...... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||........ . .......
T Consensus 154 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 227 (337)
T cd07858 154 LARTTSEKG------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGS 227 (337)
T ss_pred cccccCCCc------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 997653221 11123457889999998765 4688999999999999999999999965321100 0 0000000
Q ss_pred hcccchhhhccHHHHHhhhc---ch-hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMS---SE-SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR--LKNAQK 753 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~---~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~ 753 (767)
..+.......+......... .. .......+.+...+.+++.+||+.||++|||++|++++ ++.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 228 PSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred CChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 00111111111111111100 00 00001111122333448889999999999999999988 665543
No 314
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.1e-34 Score=300.72 Aligned_cols=283 Identities=24% Similarity=0.321 Sum_probs=196.3
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc---cc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF---KN 527 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 527 (767)
.++|++.+.||+|+||.||+|... +++.||||.+.... ......+.+|++++++++||||++++++|..... ..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999975 58999999886432 2223456789999999999999999998865432 23
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....++||||+++ ++.+++.... ..+++.+++.++.|++.||+|||++ +++|+||||+||+++.++.+||+
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEEC
Confidence 3567999999965 8888876532 2389999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCCCC-CCCcccchhhhHHHHHHHhCCCCCCCcccCCc-chhhHh
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEV-SLVKWV 685 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~~~~~ 685 (767)
|||.+.......... ........++..|+|||.+.+.. ++.++||||+|+++|||++|+.||........ .....+
T Consensus 162 dfg~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 162 DFGLARAFSLSKNSK--PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred cCCCcccccCCcccC--CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 999997654332111 11112345788899999876643 68899999999999999999999865432110 111111
Q ss_pred hhhcccch-hhhccHHHHHhhhcchhhHHHHHHHH-----HHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 686 ESNFPKNA-QQVLDRELRQLMMSSESQTIQLHDCL-----ITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 686 ~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+..+... +..........+.............+ ...+.+++.+||..||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 11111111 00000000000000000000000000 1122348889999999999999999864
No 315
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-35 Score=301.87 Aligned_cols=250 Identities=26% Similarity=0.347 Sum_probs=199.9
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
...+.|.+...||+|.|+.|.+|++. ++..||+|.+++..- ...+.+.+|+++|+.++|||||+++.+. ...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~ 127 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETE 127 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eec
Confidence 34578999999999999999999965 599999999976533 3345688999999999999999999994 455
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+|+||||+.+|.+++++..... ..+.++..++.|+.+|++|||++ .|||||||++||+++.+..+||+|
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaD 198 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIAD 198 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeec
Confidence 678999999999999999988764 66688999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCC-CCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
||++..+... ......+|++.|+|||++.+..+ ++.+|+||+|+++|.|+.|..||+...-...+-. .+..
T Consensus 199 fgfS~~~~~~-------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r-vl~g 270 (596)
T KOG0586|consen 199 FGFSTFFDYG-------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR-VLRG 270 (596)
T ss_pred cccceeeccc-------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccch-heee
Confidence 9999877532 22345789999999999998877 7899999999999999999999976422211100 0000
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+. ++..+. .-.++++++++..+|.+|++++++.+.
T Consensus 271 k~r--Ip~~ms----------------------~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 271 KYR--IPFYMS----------------------CDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred eec--ccceee----------------------chhHHHHHHhhccCccccCCHHHhhhh
Confidence 010 011111 112236667888999999999998765
No 316
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-36 Score=277.13 Aligned_cols=282 Identities=23% Similarity=0.349 Sum_probs=204.8
Q ss_pred cCCCCCCccccccceEEEEEEeCC-CcEEEEEEeec--cCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc---ccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDI--ESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF---KNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~~ 528 (767)
+.|....+||+|.||.||+|+.++ |++||+|++-. +..+-.....+|++++..++|+|++.+++.|..... .+.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 466777899999999999999654 88899987633 344455678899999999999999999999866442 334
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+|+|+++|+. +|..++.... .+++..++.++++++..||.|+|+. .|+|||+||.|++|+.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 468999999987 9998887643 3489999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCC-cchhhHhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGE-VSLVKWVE 686 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~ 686 (767)
||+++.+...... .....+..+-|.+|++||.+.+. .++++.|||+.|||+.||+||.+-++...... ..+....-
T Consensus 168 FGlar~fs~~~n~--~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~Lc 245 (376)
T KOG0669|consen 168 FGLARAFSTSKNV--VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLC 245 (376)
T ss_pred cccccceeccccc--CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHh
Confidence 9999766543222 22223455569999999988764 58999999999999999999998876543221 11222222
Q ss_pred hhcccc-hhhhccHHHHHhhhcch---hhHHHHHHHHH------HHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 687 SNFPKN-AQQVLDRELRQLMMSSE---SQTIQLHDCLI------TIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 687 ~~~~~~-~~~~~~~~l~~~~~~~~---~~~~~~~~~~~------~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
+.+.++ ++....-.+.+.+...+ .+...+.+.++ ..+. ++..++..||.+|+++++++.+-
T Consensus 246 Gs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~d-Lle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 246 GSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALD-LLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred ccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHH-HHHHHhccCcccCcchHhhhchh
Confidence 222222 22222222333221111 11111222222 2233 67789999999999999988764
No 317
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.1e-35 Score=300.91 Aligned_cols=199 Identities=29% Similarity=0.402 Sum_probs=166.8
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++||||+++++++ ..+...
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 46889999999999999999976 489999998754322 2345688999999999999999999985 455678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||++++++.++..... .+++.++..++.|++.|++|||+. +++||||+|+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 99999999999988765432 389999999999999999999998 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+........ ......++..|+|||++.+ ..++.++||||||+++|||++|++||..
T Consensus 147 ~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~ 203 (286)
T cd07846 147 ARTLAAPGE------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPG 203 (286)
T ss_pred eeeccCCcc------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCC
Confidence 876433211 1123457889999998865 3468899999999999999999999864
No 318
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2e-37 Score=316.64 Aligned_cols=366 Identities=27% Similarity=0.375 Sum_probs=251.5
Q ss_pred CccEEeCCCCeee-ecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEe
Q 004218 3 SLVYLGLASNQLW-GEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYN 81 (767)
Q Consensus 3 ~L~~L~l~~n~l~-~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 81 (767)
-.+-.|+|+|.++ +..|.++- .+..++.|.|...++. .+|+.++.+.+|++|.+++|++. .+...++.|+.|+.+.
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~-qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVE-QMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred eeecccccCCcCCCCcCchhHH-HhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 3456777888877 46776664 4777788888877777 67777888888888888888777 6666777777777777
Q ss_pred ecCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEEC
Q 004218 82 IGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNL 161 (767)
Q Consensus 82 l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l 161 (767)
+..|+++.. -+|+.+-.+..|+.||||+|++. +.|..+...++ +-.|+|++|+|..+....|-+++.|-.|||
T Consensus 85 ~R~N~LKns-----GiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn-~iVLNLS~N~IetIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 85 VRDNNLKNS-----GIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKN-SIVLNLSYNNIETIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred hhccccccC-----CCCchhcccccceeeecchhhhh-hcchhhhhhcC-cEEEEcccCccccCCchHHHhhHhHhhhcc
Confidence 777777654 56667777777778888888777 67777777766 777788888777444445667777777788
Q ss_pred cCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCC-CCCcccccCccccccccccCcccCC
Q 004218 162 SYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELA-SEIPTSFGNFQNLLSIDLSNNKLNG 240 (767)
Q Consensus 162 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~n~l~~ 240 (767)
|+|++. .+|+.+..+.+|++|+|++|.+...--..+..+++|+.|.+++.+=+ ..+|..+..+.+|..+|+|.|.+.
T Consensus 158 S~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp- 235 (1255)
T KOG0444|consen 158 SNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP- 235 (1255)
T ss_pred ccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-
Confidence 877777 56667777777777777777766333344455666666666665432 235666667777777777777776
Q ss_pred CCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccC-CCCchh
Q 004218 241 NIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSG-PIPNIL 319 (767)
Q Consensus 241 ~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~ 319 (767)
.+|..+..+++|.++ +|++|+|+ .+....+.-.+|+.|+||.|+++ .+|+.++.++.|+.|++.+|+++- -+|..+
T Consensus 236 ~vPecly~l~~LrrL-NLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGI 312 (1255)
T KOG0444|consen 236 IVPECLYKLRNLRRL-NLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGI 312 (1255)
T ss_pred cchHHHhhhhhhhee-ccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccch
Confidence 667777777776444 77777776 34444455556677777777776 666677777777777777776652 356666
Q ss_pred hccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCCccccccccccccCCcCcc
Q 004218 320 AELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGNPKLC 384 (767)
Q Consensus 320 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~Np~~c 384 (767)
+++.+|+.+..++|.+. ..|+.+..|++|+.|.|+.|++-..|...-.++.+..+.+..||.+-
T Consensus 313 GKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 313 GKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITLPEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred hhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeechhhhhhcCCcceeeccCCcCcc
Confidence 66667777777776665 66666777777777777777766665555556666666666666443
No 319
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.6e-34 Score=297.78 Aligned_cols=208 Identities=25% Similarity=0.336 Sum_probs=168.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|.+. +++.||+|..+... ......+.+|+.+++.+. ||||+++++++...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999975 58999999886442 223467888999999995 699999999876544333445
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-CCceEEccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE-DMTAKVGDF 609 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~kl~Df 609 (767)
.++||||+++ +|.+++...... ....+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999986 899988654321 124589999999999999999999999 9999999999999998 899999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
|.+..+..... ......+++.|+|||++.+ ..++.++||||+|+++|+|++|..||..
T Consensus 156 g~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 214 (295)
T cd07837 156 GLGRAFSIPVK------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPG 214 (295)
T ss_pred ccceecCCCcc------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCC
Confidence 99875432211 1112246788999998765 4578999999999999999999999865
No 320
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=274.90 Aligned_cols=274 Identities=24% Similarity=0.372 Sum_probs=201.1
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEEE-eCCCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCC
Q 004218 447 YDELRRATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLD 524 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 524 (767)
++++-..++ +.||+|+++.|-.++ ..+|..||||++++.......++.+|++++.+. .|+||++++++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief----- 144 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF----- 144 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----
Confidence 566665554 679999999999998 667999999999888777788999999999999 59999999999
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC--
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-- 602 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-- 602 (767)
|+++..+|+|||-|.||+|.+++++.+. +++.++.++.++|+.||.|||.+ ||.|||+||+|||..+..
T Consensus 145 FEdd~~FYLVfEKm~GGplLshI~~~~~------F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 145 FEDDTRFYLVFEKMRGGPLLSHIQKRKH------FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKV 215 (463)
T ss_pred hcccceEEEEEecccCchHHHHHHHhhh------ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCc
Confidence 6788899999999999999999987664 99999999999999999999999 999999999999997554
Q ss_pred -ceEEccccchhhhhhhcC-CCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 603 -TAKVGDFGLARSLLERIG-NQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 603 -~~kl~Dfg~a~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
-+|||||.+..-...... ...........+|+..|||||+.. ...|+.++|.||+|+|+|-|++|.+||...-
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 489999988754322211 122233345577999999999753 2357889999999999999999999996542
Q ss_pred cCCcchhhHhhhhcccchhhhccHHHHH-hhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 676 AGEVSLVKWVESNFPKNAQQVLDRELRQ-LMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
..+- -|-++..-..-++.+-+.+.. .+...+..... +....++++...+..||.+|.+|.+++.
T Consensus 296 g~dC---GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah----IS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 296 GADC---GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH----ISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CCcC---CccCCCccHHHHHHHHHHHhccCCcCChhhhHH----hhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 2211 111111100001111111111 01111112222 3333444666777789999999998887
No 321
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.3e-34 Score=290.13 Aligned_cols=249 Identities=21% Similarity=0.258 Sum_probs=186.8
Q ss_pred HHHHHHHhcCCCCCCcc--ccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeec
Q 004218 447 YDELRRATGNFSHENLI--GSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSS 522 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~l--g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 522 (767)
..+.....++|++.+.+ |+|+||.||++..+ +++.+|+|.+........ |+.....+ +|||++++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~- 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVT- 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEe-
Confidence 34455556788888877 99999999999965 588899999864322211 22222222 7999999999864
Q ss_pred CCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 004218 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM 602 (767)
Q Consensus 523 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 602 (767)
..+..++||||+++++|.+++.... .+++.++..++.|+++|++|||+. +++||||||+||+++.++
T Consensus 80 ----~~~~~~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 80 ----TLKGHVLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK 146 (267)
T ss_pred ----cCCeeEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence 3457799999999999999997643 389999999999999999999999 999999999999999988
Q ss_pred -ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcch
Q 004218 603 -TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681 (767)
Q Consensus 603 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 681 (767)
.++|+|||.+...... ....|+..|+|||++.+..++.++||||+|+++|+|++|+.||..........
T Consensus 147 ~~~~l~dfg~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~ 216 (267)
T PHA03390 147 DRIYLCDYGLCKIIGTP----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDL 216 (267)
T ss_pred CeEEEecCccceecCCC----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhH
Confidence 9999999998754321 22357899999999998889999999999999999999999997543332222
Q ss_pred hhHhhhhc-ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCC-HHHHHH
Q 004218 682 VKWVESNF-PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRID-IREALR 746 (767)
Q Consensus 682 ~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt-~~evl~ 746 (767)
..+..... +...... ....+.+++.+||+.+|.+||+ ++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~----------------------~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 217 ESLLKRQQKKLPFIKN----------------------VSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHHhhcccCCcccc----------------------cCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 22211110 0000111 1112233667899999999996 588875
No 322
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7e-34 Score=290.31 Aligned_cols=254 Identities=24% Similarity=0.302 Sum_probs=191.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc-----CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE-----STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
.+|++.+.||+|+||.||+|.+. +++.||+|.+... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~---~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRD---PEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEc---CCC
Confidence 46889999999999999999965 4899999987532 12234578899999999999999999998643 223
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+++|+||+++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 46789999999999999987543 278999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
||.++........ ........|+..|+|||.+.+..++.++||||||+++|++++|+.||....... ...+.....
T Consensus 150 fg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~ 225 (264)
T cd06653 150 FGASKRIQTICMS---GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIATQP 225 (264)
T ss_pred ccccccccccccc---CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHHcCC
Confidence 9999765321111 111123458899999999988889999999999999999999999986531111 111111110
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+...+..+. +.+.+++.+||. +|..|||+.+++.+
T Consensus 226 ~~~~~p~~~~----------------------~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 226 TKPMLPDGVS----------------------DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCCCCcccC----------------------HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 1111111111 122236667888 57999999998764
No 323
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.1e-34 Score=298.71 Aligned_cols=247 Identities=26% Similarity=0.338 Sum_probs=188.2
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
...|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+.+|+++++.++|||++++++++.. +.
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~ 88 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----EH 88 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----CC
Confidence 356889999999999999999975 589999998864322 234568899999999999999999999653 44
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++|+||
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeec
Confidence 5699999997 58877775432 2389999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE 686 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 686 (767)
|++...... ....++..|+|||++. ...++.++||||||+++|||++|+.||........ ......
T Consensus 160 g~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-~~~~~~ 228 (307)
T cd06607 160 GSASLVSPA----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQ 228 (307)
T ss_pred CcceecCCC----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-HHHHhc
Confidence 998654221 2245788999999874 45678899999999999999999999854321110 000000
Q ss_pred hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...+..... .....+.+++.+||+.||++||++.+++.+
T Consensus 229 ~~~~~~~~~----------------------~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 229 NDSPTLSSN----------------------DWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCCCCCCch----------------------hhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 000000000 011123337779999999999999999875
No 324
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.1e-34 Score=290.24 Aligned_cols=254 Identities=28% Similarity=0.379 Sum_probs=197.6
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++||||+++++.+.... ....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 4778899999999999999976 589999999865442 44678889999999999999999999865321 26779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 9999999999999997653 389999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
......... .......++..|+|||...+...+.++||||+|+++|+|++|+.||.....................
T Consensus 149 ~~~~~~~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T cd06606 149 KRLGDIETG----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPE 224 (260)
T ss_pred Eeccccccc----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcC
Confidence 766443211 0113345788999999998888999999999999999999999998664311111100000000001
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+... ...+.+++.+|++.||++||++.|++++
T Consensus 225 ~~~~~----------------------~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 225 IPEHL----------------------SEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CCccc----------------------CHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 11111 1223336778999999999999999864
No 325
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=8e-34 Score=297.71 Aligned_cols=247 Identities=25% Similarity=0.327 Sum_probs=188.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.|+..+.||+|+||.||+|++. ++..||+|.+.... ....+.+.+|+++++.++|||++++++++. .+...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL-----REHTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----eCCeE
Confidence 3677889999999999999965 58899999986432 233457889999999999999999999964 34456
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++ ++.+++.... ..+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+|||.
T Consensus 101 ~lv~e~~~g-~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 101 WLVMEYCLG-SASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred EEEEeCCCC-CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 999999975 8888775433 2389999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
+..... .....|+..|+|||++. .+.++.++||||+||++|+|++|+.||...... ..........
T Consensus 172 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~~ 240 (317)
T cd06635 172 ASIASP----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNE 240 (317)
T ss_pred ccccCC----------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhcc
Confidence 864322 12345788999999874 456889999999999999999999998553111 0111111111
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
.+..... .....+.+++.+||+.+|.+||++.|++++..
T Consensus 241 ~~~~~~~----------------------~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 241 SPTLQSN----------------------EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CCCCCCc----------------------cccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 1110000 11112334777899999999999999998753
No 326
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.9e-34 Score=288.56 Aligned_cols=250 Identities=28% Similarity=0.412 Sum_probs=196.1
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.|+..+.||+|++|.||++... +++.|++|++........+.+.+|+++++.++|++++++++++. .+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 3778899999999999999976 58899999997655456678999999999999999999999854 34567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 99999999999987652 2389999999999999999999998 999999999999999999999999999976
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
...... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||........ .........+....
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~ 219 (253)
T cd05122 148 LSDTKA-------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA-LFKIATNGPPGLRN 219 (253)
T ss_pred cccccc-------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH-HHHHHhcCCCCcCc
Confidence 543211 2334578899999999888899999999999999999999999865321100 00000000000000
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. .. ....+.+++.+||+.||++|||+.|++++
T Consensus 220 ~-----------------~~----~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 220 P-----------------EK----WSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred c-----------------cc----cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0 00 01122337778999999999999999864
No 327
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-35 Score=271.51 Aligned_cols=249 Identities=22% Similarity=0.311 Sum_probs=190.1
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc-CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE-STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+.+.+..||.|.-|.||++..+. |...|||.+... +.+..++++..++++... ..|+||+.+|++. .+..++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCchHH
Confidence 34455679999999999999765 889999999654 445567888888877665 4899999999953 445568
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+.||.|.. .++.++.... .++++.-+-++...+.+||.||.++. +|+|||+||+|||+|+.|++|+||||.+
T Consensus 168 IcMelMs~-C~ekLlkrik-----~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 168 ICMELMST-CAEKLLKRIK-----GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHHHH-HHHHHHHHhc-----CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 89998843 6666666544 34888888899999999999998863 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCC---CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG---EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
-.+.+.... ...+|.+.|||||.+.- ..|+-++||||||++++|++||+.||.....+...+.+... ..
T Consensus 240 GrlvdSkAh-------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~e 311 (391)
T KOG0983|consen 240 GRLVDSKAH-------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EE 311 (391)
T ss_pred ceeeccccc-------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cC
Confidence 776554322 33468899999998864 36788999999999999999999999875554444433333 22
Q ss_pred ccchhh-h-ccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQ-V-LDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~-~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|+..+. . +.+. + .+++..||.+|+.+||...+++++
T Consensus 312 PP~L~~~~gFSp~------------------F----~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 PPLLPGHMGFSPD------------------F----QSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCcccCcCHH------------------H----HHHHHHHhhcCcccCcchHHHhcC
Confidence 221111 0 1211 2 225557999999999999998875
No 328
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.2e-34 Score=298.91 Aligned_cols=202 Identities=28% Similarity=0.373 Sum_probs=167.7
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|+||.||+|.++ +++.||+|.++.... .....+.+|+.++++++||||+++++++... +....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence 57899999999999999999976 488999999864432 2234567899999999999999999986532 23678
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||+++ +|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.
T Consensus 82 ~lv~e~~~~-~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 82 YMVMEYVEH-DLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred EEEehhcCc-CHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 999999975 9999887543 2489999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCC-CCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+........ ......++..|+|||.+.+.. ++.++||||+|+++|+|++|+.||...
T Consensus 153 ~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~ 210 (293)
T cd07843 153 AREYGSPLK------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK 210 (293)
T ss_pred eeeccCCcc------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 976543211 112234688899999887644 688999999999999999999998653
No 329
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5e-34 Score=290.40 Aligned_cols=250 Identities=25% Similarity=0.327 Sum_probs=192.2
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||+|..+. |..||+|.+.... ....+.+.+|+++++.++|+|++++++.+. .+...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-----ENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-----cCCeEE
Confidence 57888999999999999999764 8899999986542 234567789999999999999999999853 455779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-ceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-TAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~ 611 (767)
+|+||+++++|.+++.... ...+++..+..++.|++.|++|||+. +++|+||||+||++++++ .+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQR----GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 9999999999999987543 23479999999999999999999998 999999999999999875 469999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+........ ......|+..|+|||+..+..++.++||||+|+++|+|++|+.||...... +........
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~ 217 (257)
T cd08225 149 ARQLNDSME------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-----QLVLKICQG 217 (257)
T ss_pred chhccCCcc------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHhcc
Confidence 976543211 112245788999999998888999999999999999999999998543211 111111000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..... . . .....+.+++.+||..+|++|||+.|++++
T Consensus 218 ~~~~~-~--------------~----~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 218 YFAPI-S--------------P----NFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred cCCCC-C--------------C----CCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00000 0 0 001112236778999999999999999864
No 330
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.4e-34 Score=293.76 Aligned_cols=273 Identities=23% Similarity=0.340 Sum_probs=194.3
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
+|++.+.||.|++|.||+|++. +|+.||+|.+..... ...+.+.+|++++++++||||+++++++. ..+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 5888999999999999999976 488999999865432 33466788999999999999999999964 3456799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+.
T Consensus 76 v~e~~~~-~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMDK-DLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCCc-cHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 9999985 89988865432 23489999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh-ccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN-FPK 691 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~ 691 (767)
....... ......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+. ........ .+.
T Consensus 149 ~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~ 221 (284)
T cd07836 149 AFGIPVN------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIFRIMGTPT 221 (284)
T ss_pred hhcCCcc------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCC
Confidence 5432211 11223468889999987654 468899999999999999999999865432211 11111000 000
Q ss_pred --chhhhc-cHHHHHhhhc-chhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 --NAQQVL-DRELRQLMMS-SESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 --~~~~~~-~~~l~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... .+.+...... .........+.....+.+++.+|++.||.+||+++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 222 ESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 0000000000 0001111111223334457789999999999999999863
No 331
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.7e-34 Score=299.39 Aligned_cols=202 Identities=22% Similarity=0.306 Sum_probs=160.7
Q ss_pred Cccccc--cceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSG--SFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
..||+| +||+||+|.+. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++. .+...++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence 456666 89999999975 59999999986442 223467889999999999999999999964 455679999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||++++++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+...
T Consensus 79 e~~~~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFP----EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999876432 3489999999999999999999998 9999999999999999999999999876543
Q ss_pred hhhcCCCcc-ccccccccCCCCccCccccCCC--CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 616 LERIGNQSS-ISSTHVLKGSIGYIPPEYGLGE--KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 616 ~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
......... ........++..|+|||++.+. .++.++||||+||++|+|++|+.||...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 222111100 0001112356679999998764 4789999999999999999999999654
No 332
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=6.1e-34 Score=294.99 Aligned_cols=267 Identities=20% Similarity=0.239 Sum_probs=182.7
Q ss_pred hcCCCCCCccccccceEEEEEEeCC----CcEEEEEEeeccCCcch-----------hhHHHHHHHHhcCCCCCceeEEe
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIESTGTW-----------KSFFAECEALRNTRHRNLVKLIT 518 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~~ 518 (767)
.++|++.+.||+|+||.||+|.+.+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999999754 34667776433322111 11223334456678999999998
Q ss_pred eeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 519 SCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 519 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
++.... ....+.++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKLVE-NTKEIFKRIK------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEec-CCceEEEEEEehhcc-CHHHHHHhhc------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 754321 122345788888744 7777665432 257788899999999999999998 99999999999999
Q ss_pred CCCCceEEccccchhhhhhhcCCCc-cccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccC
Q 004218 599 DEDMTAKVGDFGLARSLLERIGNQS-SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 677 (767)
+.++.++|+|||+|+.+........ .........||+.|+|||+..+..++.++||||+||++|||++|+.||......
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~ 239 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHN 239 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccc
Confidence 9999999999999986643211111 111123346999999999999999999999999999999999999999764222
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
.. ........+. .... .. ......+ .+.+.+++..|++.+|++||+++++.+.+
T Consensus 240 ~~-~~~~~~~~~~-----------~~~~-~~---~~~~~~~-~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 240 GN-LIHAAKCDFI-----------KRLH-EG---KIKIKNA-NKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred hH-HHHHhHHHHH-----------HHhh-hh---hhccCCC-CHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11 1111110000 0000 00 0000001 12222366789999999999999999876
No 333
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-35 Score=289.26 Aligned_cols=202 Identities=29% Similarity=0.405 Sum_probs=175.2
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 528 (767)
..+.|+.-++||+|+||.||-++.+ +|+.||.|.+.+. ......-.++|-.++.++..+.||.+-.+ ++..
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTk 257 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETK 257 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCC
Confidence 3456788899999999999999965 4999999988543 33445567899999999999999998766 5667
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
+.+|+|+..|.||+|.-++-... ...+++..+..++.+|+.||++||+. +||.||+||+|||+|+.|+++|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g----~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISD 330 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHG----NPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISD 330 (591)
T ss_pred CceEEEEEeecCCceeEEeeccC----CCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeec
Confidence 78899999999999998887665 35599999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.|+|..+..... ....+||.+|||||++.++.|+...|+||+||++|||+.|+.||..
T Consensus 331 LGLAvei~~g~~-------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 331 LGLAVEIPEGKP-------IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred cceEEecCCCCc-------cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 999987754321 2334799999999999999999999999999999999999999954
No 334
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1e-33 Score=297.65 Aligned_cols=209 Identities=26% Similarity=0.375 Sum_probs=169.4
Q ss_pred CCCCCCccccccceEEEEEEeCC---CcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE---GISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~---~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|++.+.||+|+||.||+|.... ++.||+|.+.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47888999999999999999754 7899999987532 34456778899999999999999999997532 235
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC----CCceE
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE----DMTAK 605 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~----~~~~k 605 (767)
..++||||+++ ++.+++...... ....+++..++.++.|++.|++|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQA-KRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccC-CCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 78999999975 777777543321 123589999999999999999999999 9999999999999999 99999
Q ss_pred EccccchhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
|+|||++......... ........++..|+|||++.+. .++.++||||+|+++|+|++|++||....
T Consensus 153 l~Dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 153 IGDLGLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ECCCccccccCCCccc---ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 9999999865433211 1112334578899999987664 57899999999999999999999997543
No 335
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.4e-34 Score=296.16 Aligned_cols=201 Identities=27% Similarity=0.387 Sum_probs=168.8
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|+||.||+|.+. +++.||+|.++.. .....+.+.+|++++++++|+||+++++++. .++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEE
Confidence 46889999999999999999976 4889999988643 2334567889999999999999999999964 35567
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
++||||++++.+..+.... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+|||.
T Consensus 76 ~iv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASP------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 9999999987776655432 2389999999999999999999999 999999999999999999999999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+........ .......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...
T Consensus 147 ~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 205 (288)
T cd07833 147 ARALRARPA-----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD 205 (288)
T ss_pred ccccCCCcc-----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 876543321 011234578889999999887 7899999999999999999999998653
No 336
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.6e-34 Score=302.43 Aligned_cols=279 Identities=25% Similarity=0.292 Sum_probs=196.7
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 528 (767)
..++|++.+.||+|+||.||+|.+. +++.||+|.+... .......+.+|+.+++++ +||||+++++++.. .+.
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 4578999999999999999999976 4889999988532 223345677899999999 99999999998643 234
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 56799999997 4999988653 288999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
||.+.......... .........|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ .......
T Consensus 151 ~g~~~~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~ 228 (337)
T cd07852 151 FGLARSLSELEENP-ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEV 228 (337)
T ss_pred ccchhccccccccc-cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHH
Confidence 99998664332111 0112233468899999998755 4578899999999999999999999865322111 1111110
Q ss_pred h--cccc-hhhhccHHHHHhhhc----chhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 N--FPKN-AQQVLDRELRQLMMS----SESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~--~~~~-~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. .+.. ............+.. ......+........+.+++.+||+.||++|||+.+++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 229 IGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 0000 000000000001100 0000011111112233448889999999999999999986
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=4.6e-34 Score=298.76 Aligned_cols=203 Identities=28% Similarity=0.390 Sum_probs=167.1
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.++|++.+.||+|+||.||+|.+. +|+.||+|.++.... .....+.+|+.++++++|+|++++++++.. ...+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG---KHLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec---CCCCe
Confidence 468999999999999999999975 489999999864432 223456789999999999999999998653 22345
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+++ +|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~~-~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCEQ-DLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCCC-CHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 7999999975 8988887543 3489999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.+........ ......++..|+|||.+.+ ..++.++||||+|+++|||++|+.||...
T Consensus 154 ~~~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 154 LARTYGLPAK------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred eeeecCCccC------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9976543211 1122235788999998865 45789999999999999999999999653
No 338
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.5e-34 Score=295.12 Aligned_cols=271 Identities=24% Similarity=0.310 Sum_probs=191.8
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|++.+.||.|++|.||+|.+. +|+.||+|++.... ....+.+.+|+++++.++|||++++++++. ++...++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 677899999999999999975 59999999986543 233456889999999999999999999954 4467799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFLD-LDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEeccC-cCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 999995 699999876441 3489999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc-cc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF-PK 691 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~ 691 (767)
........ .....++..|+|||++.+. .++.++||||+|+++|+|++|+.||....... .......... +.
T Consensus 148 ~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 220 (283)
T cd07835 148 AFGVPVRT------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPD 220 (283)
T ss_pred ccCCCccc------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 54322111 1122467889999987664 46889999999999999999999986532211 1111111100 00
Q ss_pred c-hhhh--ccHHHHHhhhcch-hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 N-AQQV--LDRELRQLMMSSE-SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~-~~~~--~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. .... ..+.......... .........+...+.+++.+||+.||++|||++|++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 221 EDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 0000 0000000000000 00000011111223347889999999999999999864
No 339
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.5e-34 Score=289.13 Aligned_cols=192 Identities=29% Similarity=0.423 Sum_probs=164.9
Q ss_pred cccccceEEEEEEeCC-CcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||.|++|.||+|.... ++.||+|++.... ....+.+.+|+++++.++||||+++++++. ++...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 6899999999999764 8899999986432 234567889999999999999999999853 456679999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 9999999997643 289999999999999999999998 9999999999999999999999999999765432
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
. ......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||....
T Consensus 147 ~-------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 147 Q-------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred c-------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 1 1123457889999999888889999999999999999999999996643
No 340
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.6e-33 Score=289.67 Aligned_cols=242 Identities=23% Similarity=0.305 Sum_probs=178.4
Q ss_pred ccccccceEEEEEEeC-CCcEEEEEEeeccCCc---chhhHHHHHH---HHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 462 LIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG---TWKSFFAECE---ALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~---~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.||+|+||.||+|... +++.||+|.+...... ....+..|.. .++...||+|+++++++ ......++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 4899999999999965 4889999998643221 1122334433 44445799999999884 345577999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 76 ~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999886533 389999999999999999999998 999999999999999999999999999875
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccch
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNA 693 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 693 (767)
..... .....|+..|+|||.+.++ .++.++||||+|+++|+|++|+.||..................+...
T Consensus 147 ~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 218 (278)
T cd05606 147 FSKKK--------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVEL 218 (278)
T ss_pred cCccC--------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCC
Confidence 43211 1234589999999998754 58899999999999999999999996542211111000000000111
Q ss_pred hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 004218 694 QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRI-----DIREALRR 747 (767)
Q Consensus 694 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----t~~evl~~ 747 (767)
+...+. .+.+++.+|+..+|++|| ++.|++++
T Consensus 219 ~~~~s~----------------------~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 PDSFSP----------------------ELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CCcCCH----------------------HHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 111111 122366689999999999 99999864
No 341
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.1e-33 Score=287.30 Aligned_cols=247 Identities=29% Similarity=0.438 Sum_probs=194.4
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|||++++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 5788999999999999999876 478999999865543 35567899999999999999999999854 346779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++.... .+++..+..++.|++.|+.|||+. ||+||||+|+||+++.++.++|+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 9999999999999987643 389999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
......... .....++..|+|||...+..++.++||||+|+++|+|++|+.||...... ...........+ .
T Consensus 147 ~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~-~ 218 (254)
T cd06627 147 TKLNDVSKD------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM-AALFRIVQDDHP-P 218 (254)
T ss_pred eecCCCccc------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHhccCCC-C
Confidence 866433211 12345788999999988888899999999999999999999998643211 000010000000 0
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
....++ ..+.+++.+||..+|++|||+.|++.
T Consensus 219 ~~~~~~----------------------~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 219 LPEGIS----------------------PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCCCC----------------------HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111111 12223667899999999999999985
No 342
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.5e-33 Score=287.10 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=197.1
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|+||.||++.+. ++..||+|++..... ...+.+.+|+++++.++|||++++++.+. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 5888899999999999999976 588999999875433 45567889999999999999999999854 346779
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+||+++++|.+++..... ....+++.++..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 99999999999999976531 124599999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
....... .......|+..|+|||...+..++.++||||+|+++|+|++|+.||...... .............
T Consensus 151 ~~~~~~~------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~ 222 (258)
T cd08215 151 KVLSSTV------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--ELALKILKGQYPP 222 (258)
T ss_pred eecccCc------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--HHHHHHhcCCCCC
Confidence 7654321 1123345788999999998888999999999999999999999998553211 1111111100111
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... ..+.+++.+||..+|++|||+.|++++
T Consensus 223 ~~~~~~----------------------~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 223 IPSQYS----------------------SELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCC----------------------HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111 112236778999999999999999864
No 343
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.5e-34 Score=302.70 Aligned_cols=278 Identities=21% Similarity=0.255 Sum_probs=194.3
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc-------
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF------- 525 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------- 525 (767)
.++|++.+.||.|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++.....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999975 488999999876666666788899999999999999999987654221
Q ss_pred --ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCC
Q 004218 526 --KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD-EDM 602 (767)
Q Consensus 526 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~ 602 (767)
......++||||++ ++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~ 152 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCc
Confidence 11246799999997 5998888543 288999999999999999999999 999999999999997 456
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcch
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSL 681 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 681 (767)
.+||+|||.++......... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ .
T Consensus 153 ~~kl~dfg~~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~ 228 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSHK---GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-M 228 (342)
T ss_pred eEEECCcccceecCCccccc---cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H
Confidence 78999999997543221111 11122347888999997654 5578899999999999999999999965322111 1
Q ss_pred hhHhhhhcccchhhhccH---HHHHhhh----cchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 682 VKWVESNFPKNAQQVLDR---ELRQLMM----SSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~---~l~~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. .....+......... .+..... ............+...+.+++.+||+.||++|||+.|++++
T Consensus 229 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 229 QL-ILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HH-HHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 11 111111110000000 0000000 00000000111122223347789999999999999999854
No 344
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-33 Score=289.77 Aligned_cols=193 Identities=29% Similarity=0.394 Sum_probs=163.2
Q ss_pred cccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||+|+||.||+|... +|+.||+|.+.... ....+.+.+|+++++.++||||+++++++ ...+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 689999999999865 58899999986432 22345667899999999999999999885 3456779999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||++++++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999875442 3489999999999999999999999 9999999999999999999999999998765321
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
. ......++..|+|||++.+..++.++||||+|+++|+|++|+.||...
T Consensus 149 ~-------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 149 K-------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred C-------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 1 112335788999999998888999999999999999999999998653
No 345
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.1e-34 Score=294.03 Aligned_cols=245 Identities=25% Similarity=0.385 Sum_probs=189.4
Q ss_pred CCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 460 ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
...||+|+||.||++... +++.||+|.+..........+.+|+.+++.++|+|++++++++. .++..++||||+
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 99 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEFL 99 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEecC
Confidence 367999999999999875 58999999986544455667889999999999999999999854 456779999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++.... +++..+..++.|++.|++|||+. |++||||+|+||+++.++.++|+|||.+......
T Consensus 100 ~~~~L~~~~~~~~-------~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 100 EGGALTDIVTHTR-------MNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccc
Confidence 9999999875432 88999999999999999999999 9999999999999999999999999998654322
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhcc
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLD 698 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (767)
.. ......|+..|+|||.+.+..++.++||||+|+++|+|++|+.||..... ...........+......
T Consensus 170 ~~------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~-- 239 (292)
T cd06657 170 VP------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLKNL-- 239 (292)
T ss_pred cc------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccCCc--
Confidence 11 11234578899999999888889999999999999999999999854211 111111111111110000
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 699 RELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..... .+.+++.+||+.||.+||++.|++++
T Consensus 240 --------------~~~~~----~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 240 --------------HKVSP----SLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred --------------ccCCH----HHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 00001 12236668999999999999999884
No 346
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.6e-33 Score=291.87 Aligned_cols=274 Identities=26% Similarity=0.318 Sum_probs=193.6
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCC--cchhhHHHHHHHHhcC---CCCCceeEEeeeecCCccccee
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST--GTWKSFFAECEALRNT---RHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 530 (767)
|++.+.||+|+||.||+|+++. ++.||+|.+..... .....+.+|+.+++++ +|||++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778899999999999999875 89999999864322 2234566788777665 6999999999987654434445
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.+++|||+++ +|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 8999999975 89998865432 2489999999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh-c
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN-F 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~-~ 689 (767)
.+........ .....++..|+|||.+.+..++.++||||||+++|+|++|++||...... ....+..... .
T Consensus 153 ~~~~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~ 224 (287)
T cd07838 153 LARIYSFEMA-------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGL 224 (287)
T ss_pred cceeccCCcc-------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCC
Confidence 9876533211 12234688899999999888999999999999999999999998653221 1111111100 0
Q ss_pred ccc--hhhhccHHHHHhhhc-chhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKN--AQQVLDRELRQLMMS-SESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~--~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+.. ...... ........ ...........+...+.+++.+||+.||++||+++|++++
T Consensus 225 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 225 PSEEEWPRNVS-LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CChHhcCCCcc-cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000 000000 00000000 0000011111222333447789999999999999999863
No 347
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.2e-34 Score=301.48 Aligned_cols=283 Identities=22% Similarity=0.249 Sum_probs=202.8
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||+|+... ++.||+|.+.... ....+.+.+|+.+++.++||||+++++++..........++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 58889999999999999999764 8999999986543 34456788999999999999999999987654333345789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++ +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~~-~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchhh-hHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 99999974 8999886543 499999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
......... ........++..|+|||.+.+. .++.++||||+|+++|+|++|+.||....... ....+......
T Consensus 151 ~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~ 225 (330)
T cd07834 151 RGVDPDEDE---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLNLIVEVLGT 225 (330)
T ss_pred Eeecccccc---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHhcCC
Confidence 865433210 0112234578899999999887 78999999999999999999999996543211 11111110000
Q ss_pred c----hhhhccHHHHHhhh----cchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHHHHH
Q 004218 692 N----AQQVLDRELRQLMM----SSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR--LKNAQK 753 (767)
Q Consensus 692 ~----~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~ 753 (767)
. ............+. .......+....+...+.+++.+||+.+|++|||+.+++++ ++....
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 226 PSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred CChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0 00000000111100 00001111111122333447889999999999999999986 554443
No 348
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-34 Score=315.66 Aligned_cols=204 Identities=20% Similarity=0.243 Sum_probs=157.4
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC--CcEEEEEEee-----------------ccCCcchhhHHHHHHHHhcCCCCCc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE--GISVAVKVLD-----------------IESTGTWKSFFAECEALRNTRHRNL 513 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~-----------------~~~~~~~~~~~~e~~~l~~l~h~ni 513 (767)
..++|++.+.||+|+||.||++..+. +..++.|.+. .........+.+|++++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987542 2222222110 0111234567899999999999999
Q ss_pred eeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCC
Q 004218 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKP 593 (767)
Q Consensus 514 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 593 (767)
+++++++. .....++|+|++. +++.+++....... .......++..++.|++.||+|||++ +||||||||
T Consensus 226 v~l~~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILR-----SEANTYMITQKYD-FDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEE-----ECCeeEEEEeccc-cCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 99999954 4456699999985 47887775433211 12244667889999999999999999 999999999
Q ss_pred CCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCC
Q 004218 594 GNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPT 671 (767)
Q Consensus 594 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~ 671 (767)
+||+++.++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p 368 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKERE-----AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP 368 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcccc-----cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence 999999999999999999976543211 1112356899999999999999999999999999999999988643
No 349
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5.3e-34 Score=295.37 Aligned_cols=257 Identities=23% Similarity=0.278 Sum_probs=184.8
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
.|...+.||+|+||.||++.+. +++.||+|.+.... ......+.+|+.++.++. ||||+++++++. .+...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcEE
Confidence 4556678999999999999975 48999999986443 234567889999999996 999999999854 344568
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
++|||++. ++.++...... .....+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~e~~~~-~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 80 ICMELMDI-SLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEecccC-CHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 99999864 66554322100 0123489999999999999999999963 28999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCC---CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE---KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
........ .....|+..|+|||++.+. .++.++||||+|+++|+|++|+.||...........+......
T Consensus 156 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd06616 156 GQLVDSIA-------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDP 228 (288)
T ss_pred HHhccCCc-------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCC
Confidence 76533211 1223478899999998776 6889999999999999999999998653210000111100000
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+..... ....... .+.+++.+||+.||++|||++|++++
T Consensus 229 ~~~~~~---------------~~~~~~~----~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 PILSNS---------------EEREFSP----SFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CcCCCc---------------CCCccCH----HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 0000111 12237779999999999999999875
No 350
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.1e-34 Score=297.67 Aligned_cols=212 Identities=26% Similarity=0.366 Sum_probs=169.3
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCc--chhhHHHHHHHHhcCCCCCceeEEeeeecCCc---cc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTG--TWKSFFAECEALRNTRHRNLVKLITSCSSLDF---KN 527 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~~ 527 (767)
.++|++.+.||+|+||.||+|.+. +++.||+|.+...... ....+.+|+++++.++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999976 4889999988644322 23467789999999999999999987654321 23
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
...+++||||+++ ++.+.+.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 4568999999975 7777775432 2499999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCc-----cccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 608 DFGLARSLLERIGNQS-----SISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|||++........... .........++..|+|||.+.+. .++.++||||+|+++|||++|++||...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~ 230 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGK 230 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCC
Confidence 9999986543322111 11112234578889999987654 5789999999999999999999998653
No 351
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.3e-33 Score=287.14 Aligned_cols=250 Identities=25% Similarity=0.301 Sum_probs=195.2
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|++.+.||+|++|.||++... +++.+|+|.+.... ......+.+|+++++.++|+||+++++++. .+...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 4788899999999999999865 58899999986542 234557789999999999999999998853 446789
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+++++|.+++..... ....+++..++.++.|++.|++|||+. +++||||+|+||++++++.+||+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKK--KRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 99999999999999876321 134589999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
....... .....++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... .....+.......
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~ 220 (256)
T cd08530 151 KVLKKNM--------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQRGKYPP 220 (256)
T ss_pred hhhccCC--------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCCCCC
Confidence 8764431 12234788999999999888999999999999999999999998653211 1111111100000
Q ss_pred hhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
... .....+.+++.+|++.+|++|||+.|++++
T Consensus 221 ~~~----------------------~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 221 IPP----------------------IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred Cch----------------------hhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 111123337779999999999999999864
No 352
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.1e-33 Score=296.72 Aligned_cols=275 Identities=20% Similarity=0.211 Sum_probs=186.9
Q ss_pred CCccccccceEEEEEEeCCCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEee
Q 004218 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEF 537 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 537 (767)
.+.+|.|+++.||++.. +++.||+|++... .....+.+.+|+++++.++||||+++++++. .....+++|||
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e~ 80 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSPL 80 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEec
Confidence 34445555555555544 5899999998654 3345678999999999999999999999853 45567999999
Q ss_pred cCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhh
Q 004218 538 LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617 (767)
Q Consensus 538 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 617 (767)
+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~~~~l~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~ 153 (314)
T cd08216 81 MAYGSCEDLLKTHF----PEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK 153 (314)
T ss_pred cCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecc
Confidence 99999999997543 23488999999999999999999999 999999999999999999999999999875533
Q ss_pred hcCCC-ccccccccccCCCCccCccccCCC--CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 618 RIGNQ-SSISSTHVLKGSIGYIPPEYGLGE--KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 618 ~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
..... ..........++..|+|||++.+. .++.++||||+||++|||++|+.||........ .........+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 232 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVPCLLD 232 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCccccc
Confidence 21110 011111334577889999998763 578899999999999999999999975432211 11111111110000
Q ss_pred hhccHHHHHhh--------hc--chhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 695 QVLDRELRQLM--------MS--SESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 695 ~~~~~~l~~~~--------~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
....+...... .. ...........+...+.+++.+||..||++|||++|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 00000000000 00 00000111111223344477799999999999999998853
No 353
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.8e-36 Score=309.63 Aligned_cols=347 Identities=27% Similarity=0.422 Sum_probs=309.9
Q ss_pred CCCccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCccc-CCccCCCCCCCcE
Q 004218 1 MTSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGT-VPPGLGNLPFLKM 79 (767)
Q Consensus 1 l~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~ 79 (767)
|++++.|.|...++. .+|.++. ++.+|++|.+++|++. .+-+.++.|+.|+.+++..|.+... +|..+..+..|+.
T Consensus 31 Mt~~~WLkLnrt~L~-~vPeEL~-~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~ 107 (1255)
T KOG0444|consen 31 MTQMTWLKLNRTKLE-QVPEELS-RLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTI 107 (1255)
T ss_pred hhheeEEEechhhhh-hChHHHH-HHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhccccccee
Confidence 688999999999998 9999997 5999999999999999 6778899999999999999999753 6888999999999
Q ss_pred EeecCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchh-hhhccccCeEEccCCcccccCCccccCCCCCCE
Q 004218 80 YNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESI-GNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTL 158 (767)
Q Consensus 80 L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~ 158 (767)
|+||+|+++ ..|..+...+++-.|+||+|+|. .+|..+ .+++. |-.|||++|++. .+|..+..+..|++
T Consensus 108 lDLShNqL~-------EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtD-LLfLDLS~NrLe-~LPPQ~RRL~~Lqt 177 (1255)
T KOG0444|consen 108 LDLSHNQLR-------EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTD-LLFLDLSNNRLE-MLPPQIRRLSMLQT 177 (1255)
T ss_pred eecchhhhh-------hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHh-Hhhhccccchhh-hcCHHHHHHhhhhh
Confidence 999999998 56777888999999999999999 666655 47777 999999999998 67878999999999
Q ss_pred EECcCCcCcccCccccCCCCCCCEEEccCCccc-cccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcc
Q 004218 159 LNLSYNSISGEILTEIGQLQELQSLDLAGNQIS-GSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNK 237 (767)
Q Consensus 159 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 237 (767)
|+|++|.+.......+..+++|++|.+++.+-+ .-+|..+..+.+|..+++|.|.+. ..|+.+-.+++|+.|+||+|+
T Consensus 178 L~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~ 256 (1255)
T KOG0444|consen 178 LKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNK 256 (1255)
T ss_pred hhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCc
Confidence 999999988655566667788999999998754 467889999999999999999997 789999999999999999999
Q ss_pred cCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCC-CCCcccccCcccceeeccCccccCCCC
Q 004218 238 LNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSG-NLPNSFKNCKSLEKLLMANNKFSGPIP 316 (767)
Q Consensus 238 l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~ 316 (767)
|+ ++.........+.+ |+++.|+++ .+|+.++.+++|+.|.+.+|++.- -+|+.++.+.+|+.+..++|.+. ..|
T Consensus 257 it-eL~~~~~~W~~lEt-LNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVP 332 (1255)
T KOG0444|consen 257 IT-ELNMTEGEWENLET-LNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVP 332 (1255)
T ss_pred ee-eeeccHHHHhhhhh-hccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCc
Confidence 99 55555555556634 499999999 899999999999999999999862 47899999999999999999998 999
Q ss_pred chhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCC
Q 004218 317 NILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPRE 366 (767)
Q Consensus 317 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 366 (767)
+.++.|..|+.|.|+.|++. ++|+.+.-++.|+.|++..|+=.-.||..
T Consensus 333 EglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP 381 (1255)
T KOG0444|consen 333 EGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKP 381 (1255)
T ss_pred hhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCc
Confidence 99999999999999999998 89999999999999999999877777765
No 354
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.6e-33 Score=291.76 Aligned_cols=201 Identities=29% Similarity=0.439 Sum_probs=167.2
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|++.+.||+|++|.||+|...+ ++.||+|.+.... ....+.+.+|+++++.++|||++++++++... .....++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 6778899999999999999764 8899999997653 33456788999999999999999999997532 1367899
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++ +|.+++.... ..+++..++.++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+.
T Consensus 78 v~e~~~~-~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMDH-DLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eeccccc-cHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 9999975 8998886542 2489999999999999999999998 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...
T Consensus 149 ~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~ 205 (287)
T cd07840 149 PYTKRNS-----ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGS 205 (287)
T ss_pred eccCCCc-----ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 6543321 01122346788999997765 45789999999999999999999998654
No 355
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.2e-33 Score=289.86 Aligned_cols=268 Identities=23% Similarity=0.269 Sum_probs=187.8
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|++.+.||+|+||.||+|... +++.||+|.++... ........+|+.+++++. |+|++++++++.+. ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 677889999999999999965 58899999986432 222334567899998885 99999999997532 2256799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||++ |++.+++.... ..+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||.++
T Consensus 78 v~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999997 48888876532 2389999999999999999999999 9999999999999999 999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKN 692 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 692 (767)
....... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .............
T Consensus 148 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~~~~~~~~ 218 (282)
T cd07831 148 GIYSKPP-------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKIHDVLGTP 218 (282)
T ss_pred ccccCCC-------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHHHHHcCCC
Confidence 6533211 122347889999997644 55788999999999999999999999653221 1111111111111
Q ss_pred hhhhccHHHHHh------hhc-chhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 693 AQQVLDRELRQL------MMS-SESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 693 ~~~~~~~~l~~~------~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.... ....... ... ....-..........+.+++.+||+++|++|||++|++++
T Consensus 219 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 219 DAEV-LKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CHHH-HHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000 0000000 000 0000000011122333447889999999999999999864
No 356
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.7e-33 Score=293.84 Aligned_cols=208 Identities=29% Similarity=0.389 Sum_probs=169.3
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCC----
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLD---- 524 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~---- 524 (767)
+..++|++.+.||+|+||.||+|..+ +++.||+|.++... ......+.+|+++++.++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999976 48899999986543 223456778999999999999999999875432
Q ss_pred -cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 004218 525 -FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT 603 (767)
Q Consensus 525 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~ 603 (767)
..+...+++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1223478999999976 7777776432 2389999999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+||+|||.+......... ......++..|+|||.+.+ ..++.++||||+||++|+|++|++||..
T Consensus 155 ~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~ 220 (302)
T cd07864 155 IKLADFGLARLYNSEESR-----PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA 220 (302)
T ss_pred EEeCcccccccccCCccc-----ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999765432211 1112235778999998765 3568899999999999999999999865
No 357
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.8e-33 Score=293.68 Aligned_cols=248 Identities=26% Similarity=0.336 Sum_probs=188.1
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
..|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|+++++.++|+|++++++++.. ...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCe
Confidence 34777889999999999999975 4788999988643 22334578899999999999999999998643 456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.++||||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 799999996 58888775432 2388999999999999999999998 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
.+...... ....|+..|+|||.+. ...++.++||||+||++|+|++|+.||....... ........
T Consensus 161 ~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~ 229 (308)
T cd06634 161 SASIMAPA----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN 229 (308)
T ss_pred cceeecCc----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhc
Confidence 98654221 2345788999999874 3567889999999999999999999985432111 01111111
Q ss_pred hcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 688 NFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 688 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
..+...... ....+.+++.+||+.+|++||++.+++++-.
T Consensus 230 ~~~~~~~~~----------------------~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 230 ESPALQSGH----------------------WSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred CCCCcCccc----------------------ccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 111100001 1112233777999999999999999987643
No 358
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.5e-33 Score=289.72 Aligned_cols=269 Identities=24% Similarity=0.299 Sum_probs=195.4
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC--cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST--GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|++.+.||+|++|.||+|... +++.+|+|.+..... .....+.+|++++++++|+||+++++++. .+...++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCEEE
Confidence 677889999999999999975 588999999864432 24567889999999999999999999854 4467799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+++ ++.+++.... ..+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.++|+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999975 8888886642 2389999999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhccc-
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPK- 691 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 691 (767)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+ .... .......
T Consensus 147 ~~~~~~------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~-~~~~~~~~ 218 (283)
T cd05118 147 SFGSPV------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFK-IFRTLGTP 218 (283)
T ss_pred ecCCCc------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHcCCC
Confidence 654332 011223477889999998776 68999999999999999999999986532211 1111 1111000
Q ss_pred ---chhhhc---cHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 ---NAQQVL---DRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ---~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...... ...................+.+...+.+++.+||+.||.+||++.|++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 219 DPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred chHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000000 00000000000111112222334445558889999999999999999864
No 359
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.3e-33 Score=285.89 Aligned_cols=189 Identities=31% Similarity=0.448 Sum_probs=157.1
Q ss_pred CccccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHH-hcCCCCCceeEEeeeecCCcccceeeEEEE
Q 004218 461 NLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEAL-RNTRHRNLVKLITSCSSLDFKNMEFLALVY 535 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 535 (767)
+.||+|+||.||+|... +++.||+|++..... .....+..|..++ ...+|+|++++++++. .++..++||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 56899999999999975 488999999864321 1223344555444 4458999999999854 455779999
Q ss_pred eecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 536 EFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 536 e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||.+...
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 9999999999997543 389999999999999999999998 9999999999999999999999999998653
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.. .....|+..|+|||.+.+..++.++||||+|+++|+|++|..||..
T Consensus 148 ~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 148 LE----------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred cc----------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 22 1234578899999999888889999999999999999999999864
No 360
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3e-33 Score=290.70 Aligned_cols=253 Identities=23% Similarity=0.292 Sum_probs=187.3
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCccccee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.++|++.+.||+|+||.||+|.+.+ ++.||||.+.... ......+.+|+.++.+. .||||+++++++. .+..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-----TDSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----cCCe
Confidence 3678899999999999999999875 8999999986442 23345667788777666 5999999999964 4456
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
.++||||+++ ++.++..... ..+++..+..++.|++.|++|||+ . +|+||||+|+||++++++.+||+||
T Consensus 89 ~~~v~e~~~~-~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~---~i~H~dl~p~nill~~~~~~kL~df 159 (296)
T cd06618 89 VFICMELMST-CLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLKEKH---GVIHRDVKPSNILLDASGNVKLCDF 159 (296)
T ss_pred EEEEeeccCc-CHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhC---CEecCCCcHHHEEEcCCCCEEECcc
Confidence 7999999854 7877765532 248999999999999999999997 5 8999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCC----CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK----PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWV 685 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 685 (767)
|.+........ .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.........+....
T Consensus 160 g~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 232 (296)
T cd06618 160 GISGRLVDSKA-------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL 232 (296)
T ss_pred ccchhccCCCc-------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHh
Confidence 99876533211 11234678899999987554 78899999999999999999999864322111111111
Q ss_pred hhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 686 ESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 686 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
....+.. ... ....+ .+.+++.+||+.||++||++.+++++-
T Consensus 233 ~~~~~~~-~~~----------------~~~~~----~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 233 QEEPPSL-PPN----------------EGFSP----DFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred cCCCCCC-CCC----------------CCCCH----HHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 1111100 000 00011 122367789999999999999998763
No 361
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=245.66 Aligned_cols=198 Identities=27% Similarity=0.427 Sum_probs=167.5
Q ss_pred CCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+|...++||+|.||+||+|+.+ +++.||+|.++.+ .++......+|+-+++.++|.|||+++++ ...+..+-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCceeE
Confidence 5667789999999999999965 4889999998654 33456778999999999999999999998 56677889
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+|+|||.. +|..+...... .++.+.+..++.|+++|+.++|++ ++.|||+||.|.+|+.+|+.|++|||++
T Consensus 78 lvfe~cdq-dlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFCDQ-DLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHhhH-HHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 99999965 99999877653 389999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCC-CCCcccchhhhHHHHHHHhCCCC-CCC
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-PSTAGDVYSFGVMLLEIFTGMSP-THE 673 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p-~~~ 673 (767)
+.++-.. .......-|.+|++|.++.+.+ |++..|+||.||++.|+.....| |..
T Consensus 149 rafgipv------rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 149 RAFGIPV------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred hhcCCce------EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 8764322 2223345689999999998866 68899999999999999874444 543
No 362
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.8e-33 Score=290.82 Aligned_cols=201 Identities=27% Similarity=0.385 Sum_probs=164.0
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
++|++.+.||+|++|.||+|.+. +++.||+|.+.... ....+.+.+|++++++++||||+++++++. .+...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 57899999999999999999976 58899999885432 233456889999999999999999999954 45577
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-CCceEEcccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE-DMTAKVGDFG 610 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg 610 (767)
++||||++ +++.+++.... ....++..+..++.|++.||+|||++ +++||||+|+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSP----DFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCC----CCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999996 58888875433 22367888899999999999999998 9999999999999985 5679999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.+........ ......++..|+|||++.+. .++.++||||+|+++|+|+||+.||...
T Consensus 149 ~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~ 207 (294)
T PLN00009 149 LARAFGIPVR------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD 207 (294)
T ss_pred cccccCCCcc------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9975432211 11223467899999987664 5788999999999999999999999653
No 363
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.8e-33 Score=296.60 Aligned_cols=277 Identities=22% Similarity=0.265 Sum_probs=194.4
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc-ccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF-KNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 529 (767)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++... .......+.+|+++++.++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 478999999999999999999965 5899999988543 22234567899999999999999999998754321 2234
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++|+||+.. ++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 94 ~~~lv~e~~~~-~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEeccccc-CHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 56899999964 7776652 1288999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN 688 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 688 (767)
|+++..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .+.... ..
T Consensus 162 g~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~-~~ 230 (342)
T cd07879 162 GLARHADAE---------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQIL-KV 230 (342)
T ss_pred CCCcCCCCC---------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-Hh
Confidence 998753221 123356888999998876 457899999999999999999999996532111 111111 10
Q ss_pred cccchhh---hcc-HHHHHhh---hcchh-hHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HHHHHH
Q 004218 689 FPKNAQQ---VLD-RELRQLM---MSSES-QTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR--LKNAQK 753 (767)
Q Consensus 689 ~~~~~~~---~~~-~~l~~~~---~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~--L~~~~~ 753 (767)
.+...+. ... ....... ..... ............+.+++.+||+.||++||+++|++.+ ++..++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 0000000 000 0000000 00000 0000000011122347789999999999999999966 766654
No 364
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.1e-33 Score=289.79 Aligned_cols=244 Identities=26% Similarity=0.345 Sum_probs=185.6
Q ss_pred CCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 457 FSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
|...+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|+++++.++|||++++++++. ++...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYL-----KEHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEE-----eCCEEE
Confidence 566678999999999999965 488999999864322 23456889999999999999999999964 345679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||+. |++.+++.... ..+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+|||.+
T Consensus 98 lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999996 58888876433 2389999999999999999999999 9999999999999999999999999998
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccC---CCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGL---GEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
..... .....|+..|+|||++. ...++.++||||||+++|+|++|..||....... ..........
T Consensus 169 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~ 237 (313)
T cd06633 169 SKSSP----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNDS 237 (313)
T ss_pred cccCC----------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCC
Confidence 53211 12345788999999974 4567889999999999999999999985532111 0101111111
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
+...... ....+++++.+||+.+|.+||++.+++++
T Consensus 238 ~~~~~~~----------------------~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 PTLQSNE----------------------WTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCccc----------------------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1100000 01112337778999999999999999975
No 365
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.3e-33 Score=293.89 Aligned_cols=201 Identities=27% Similarity=0.353 Sum_probs=167.7
Q ss_pred HHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcc
Q 004218 450 LRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 450 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 526 (767)
+...+++|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|+++++.++||||+++++++..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 80 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS---- 80 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----
Confidence 3456789999999999999999999965 5899999987532 22345678899999999999999999998642
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
.....++||||+ +++|.+++.... +++..+..++.|+++||+|||+. +|+||||+|+||++++++.++|
T Consensus 81 ~~~~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l 149 (328)
T cd07856 81 PLEDIYFVTELL-GTDLHRLLTSRP-------LEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKI 149 (328)
T ss_pred CCCcEEEEeehh-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEe
Confidence 234678999998 568998886432 78888999999999999999999 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+|||.+...... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||...
T Consensus 150 ~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~ 209 (328)
T cd07856 150 CDFGLARIQDPQ---------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK 209 (328)
T ss_pred CccccccccCCC---------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999998743221 122346788999998765 56899999999999999999999998653
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.3e-33 Score=295.99 Aligned_cols=203 Identities=27% Similarity=0.374 Sum_probs=167.9
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-ccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKN 527 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 527 (767)
...++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35678999999999999999999855 58999999985432 223456789999999999999999999875322 112
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
...+++||||+ +++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEe
Confidence 23568999999 67999888643 289999999999999999999999 99999999999999999999999
Q ss_pred cccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 608 DFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|||.+...... .....++..|+|||.+.+ ..++.++||||+|+++|++++|+.||...
T Consensus 161 dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 219 (343)
T cd07880 161 DFGLARQTDSE---------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH 219 (343)
T ss_pred ecccccccccC---------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999754321 122356889999998876 45788999999999999999999999653
No 367
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=279.09 Aligned_cols=270 Identities=23% Similarity=0.309 Sum_probs=198.1
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCC-C-C----CceeEEeeeecCCcc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTR-H-R----NLVKLITSCSSLDFK 526 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~~~~~~~~~~~~ 526 (767)
+++|.++..+|+|.||.|-.+.++. +..||||+++.- ..-.+..+-|+++++++. + | -++.+.+| ++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 7899999999999999999999765 789999998632 223355677999999993 2 2 25666666 56
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC------
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE------ 600 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~------ 600 (767)
..++.|||+|.+ |.|+++++.... -.+++...+..|++|+++++++||+. +++|-||||+||++.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~----y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENN----YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCC----ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 778899999988 569999998755 35589999999999999999999999 9999999999999831
Q ss_pred --------------CCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh
Q 004218 601 --------------DMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666 (767)
Q Consensus 601 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t 666 (767)
+..++++|||.|+...+.. ..++.|..|+|||++.+-+++.++||||+|||++|++|
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h---------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH---------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc---------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeec
Confidence 3368999999998643321 44668999999999999999999999999999999999
Q ss_pred CCCCCCCcccC-CcchhhHhhhhcccchhhhc-cHH-----------------HHHhhhcc---hhhHHHHHHHHHHHHH
Q 004218 667 GMSPTHESFAG-EVSLVKWVESNFPKNAQQVL-DRE-----------------LRQLMMSS---ESQTIQLHDCLITIIE 724 (767)
Q Consensus 667 g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-----------------l~~~~~~~---~~~~~~~~~~~~~~l~ 724 (767)
|...|+..... ...+.+.+-+.+|..+.... .+. .+...... ......-..+-.++++
T Consensus 305 G~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfD 384 (415)
T KOG0671|consen 305 GETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFD 384 (415)
T ss_pred cceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHH
Confidence 99988764322 12334444444444322211 000 00000000 0001111122233444
Q ss_pred HHhccccCCCCCCCCCHHHHHHH
Q 004218 725 SVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 725 ~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
|+.+||.+||.+|+|+.|++.+
T Consensus 385 -Ll~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 385 -LLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred -HHHHHHccCccccccHHHHhcC
Confidence 8889999999999999999875
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6e-33 Score=294.25 Aligned_cols=280 Identities=21% Similarity=0.268 Sum_probs=198.0
Q ss_pred HHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCC
Q 004218 448 DELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLD 524 (767)
Q Consensus 448 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 524 (767)
.++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 455667899999999999999999999864 58899999986432 223456788999999999999999999875332
Q ss_pred -cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc
Q 004218 525 -FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT 603 (767)
Q Consensus 525 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~ 603 (767)
+......+++++++ +++|.+++.... +++..+..++.|+++|++|||+. +|+||||||+||++++++.
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~ 158 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCE 158 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCC
Confidence 22334568888887 779998886432 89999999999999999999999 9999999999999999999
Q ss_pred eEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchh
Q 004218 604 AKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLV 682 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 682 (767)
+||+|||+++..... .....++..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... ....
T Consensus 159 ~kl~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~ 228 (345)
T cd07877 159 LKILDFGLARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLK 228 (345)
T ss_pred EEEeccccccccccc---------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH
Confidence 999999998754221 123457889999998766 46788999999999999999999998543211 1111
Q ss_pred hHhhh--hcccchh-hhccHHHHHhh---hcchhhH-HHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 683 KWVES--NFPKNAQ-QVLDRELRQLM---MSSESQT-IQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 683 ~~~~~--~~~~~~~-~~~~~~l~~~~---~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
..... ..+.... ...+....... ...+... ..........+.+++.+|++.||.+|||+.+++++=
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~ 301 (345)
T cd07877 229 LILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 301 (345)
T ss_pred HHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcCh
Confidence 11110 0111111 11111111110 0000000 000000112233478899999999999999998773
No 369
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.5e-33 Score=288.18 Aligned_cols=254 Identities=27% Similarity=0.375 Sum_probs=195.4
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccce
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 529 (767)
++|.+.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+++++++. ||||+++++++ ..+.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 46889999999999999999975 5899999998643 2233467889999999998 99999999984 4556
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 7899999999999999997653 399999999999999999999998 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCc--------------cccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 610 GLARSLLERIGNQS--------------SISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 610 g~a~~~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
|.+........... .........++..|+|||......++.++||||+|++++++++|+.||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 99986644321100 0112234457889999999888889999999999999999999999986532
Q ss_pred cCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCH----HHHHHH
Q 004218 676 AGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDI----REALRR 747 (767)
Q Consensus 676 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~----~evl~~ 747 (767)
. ............ .....+ ...+.+++.+||+.+|++|||+ +|++++
T Consensus 227 ~-~~~~~~~~~~~~--~~~~~~----------------------~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 227 E-YLTFQKILKLEY--SFPPNF----------------------PPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred H-HHHHHHHHhcCC--CCCCcc----------------------CHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 1 000000000000 000001 1112237778999999999999 777653
No 370
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.2e-33 Score=294.30 Aligned_cols=206 Identities=26% Similarity=0.330 Sum_probs=165.8
Q ss_pred CCCCCCccccccceEEEEEEeC-C--CcEEEEEEeecc--CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR-E--GISVAVKVLDIE--STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~-~--~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|++.+.||+|+||.||++... + +..||+|.+... .....+.+.+|+++++++ +||||+++++.+... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 4788899999999999999965 3 678999988643 222346778899999999 599999999875432 12334
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
.+++++||++ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 5788999986 59999886533 389999999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|.++........ .........|+..|+|||.+.+ ..++.++||||+|+++|+|++|++||...
T Consensus 150 g~a~~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~ 213 (332)
T cd07857 150 GLARGFSENPGE--NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK 213 (332)
T ss_pred CCceeccccccc--ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence 999865432211 1111233468999999998765 46789999999999999999999998653
No 371
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=5e-33 Score=294.40 Aligned_cols=206 Identities=24% Similarity=0.354 Sum_probs=164.3
Q ss_pred hcCCCC-CCccccccceEEEEEEeC-CCcEEEEEEeeccCCcc--------------hhhHHHHHHHHhcCCCCCceeEE
Q 004218 454 TGNFSH-ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGT--------------WKSFFAECEALRNTRHRNLVKLI 517 (767)
Q Consensus 454 ~~~~~~-~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~~~ 517 (767)
.++|.. .+.||+|+||.||+|.+. +++.||+|.+....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 356654 577999999999999965 58999999985432211 12477899999999999999999
Q ss_pred eeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 004218 518 TSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNIL 597 (767)
Q Consensus 518 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 597 (767)
+++. .+...++||||++ |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||+|+||+
T Consensus 87 ~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nil 151 (335)
T PTZ00024 87 DVYV-----EGDFINLVMDIMA-SDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIF 151 (335)
T ss_pred EEEe-----cCCcEEEEEeccc-cCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeE
Confidence 9854 4457799999997 59999986533 389999999999999999999998 9999999999999
Q ss_pred eCCCCceEEccccchhhhhhhcCCC--------ccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCC
Q 004218 598 LDEDMTAKVGDFGLARSLLERIGNQ--------SSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGM 668 (767)
Q Consensus 598 ~~~~~~~kl~Dfg~a~~~~~~~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~ 668 (767)
++.++.++|+|||.+.......... ..........++..|+|||.+.+. .++.++||||+|+++|+|++|+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 152 INSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999997654211000 001111223467889999998764 4688999999999999999999
Q ss_pred CCCCCc
Q 004218 669 SPTHES 674 (767)
Q Consensus 669 ~p~~~~ 674 (767)
.||...
T Consensus 232 ~p~~~~ 237 (335)
T PTZ00024 232 PLFPGE 237 (335)
T ss_pred CCCCCC
Confidence 998654
No 372
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.5e-33 Score=285.60 Aligned_cols=198 Identities=31% Similarity=0.456 Sum_probs=165.3
Q ss_pred cccccceEEEEEEeCC-CcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||+|+||.||++.+.. |+.||+|++..... ...+.+.+|++++++++||||+++++.+ ..+...++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999875 89999999865432 3456788999999999999999999874 4556779999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 76 ~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999997643 389999999999999999999998 9999999999999999999999999998754322
Q ss_pred cCCC--ccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 619 IGNQ--SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 619 ~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.... ..........++..|+|||...+...+.++||||+|+++|++++|+.||...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 204 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGE 204 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 1100 0011223345788999999998888899999999999999999999998653
No 373
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.1e-33 Score=286.34 Aligned_cols=199 Identities=28% Similarity=0.365 Sum_probs=165.5
Q ss_pred CCCCCCccccccceEEEEEEeC----CCcEEEEEEeeccC----CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIES----TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 526 (767)
+|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++++ +|+||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999863 58899999986432 22345678899999999 599999999884 3
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
.+...++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 4567799999999999999987543 388999999999999999999998 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCC--CCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE--KPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+|||++........ .......|+..|+|||.+.+. .++.++||||+|+++|+|++|+.||..
T Consensus 147 ~dfg~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 147 TDFGLSKEFHEDEV-----ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred eeCccceecccccc-----cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 99999976533211 111234588899999998753 467899999999999999999999854
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=298.73 Aligned_cols=269 Identities=25% Similarity=0.346 Sum_probs=213.4
Q ss_pred CCccCHHHHHHHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEee
Q 004218 442 PQMISYDELRRATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITS 519 (767)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 519 (767)
...+.++.+...++.|.+.+.||+|.+|.||+++.. +++.+|+|+.....+. .+++..|.++++.. .|||++.++|+
T Consensus 6 ~~~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~ 84 (953)
T KOG0587|consen 6 LMDIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGA 84 (953)
T ss_pred ccccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEE
Confidence 345566677777889999999999999999999954 5899999998755433 35677888899887 69999999999
Q ss_pred eecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC
Q 004218 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 520 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~ 599 (767)
+...+-..++.+|+|||||.+||.-|++.... +..+.|..+..|++.++.|+.|||.+ .++|||||-.||+++
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~----g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT 157 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK----GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLT 157 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhc----ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEe
Confidence 98777777889999999999999999998766 45699999999999999999999999 999999999999999
Q ss_pred CCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCC-----CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-----KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 600 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.++.+||+|||.+..+... .....+..||+.|||||++... .|+..+|+||+|++..||.-|.+|+.+.
T Consensus 158 ~e~~VKLvDFGvSaQldsT------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 158 ENAEVKLVDFGVSAQLDST------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred ccCcEEEeeeeeeeeeecc------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 9999999999999876543 2334567899999999998643 4677899999999999999999998664
Q ss_pred ccCCcchhhHhhhhcccch-hhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 675 FAGEVSLVKWVESNFPKNA-QQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+... .- ..|..+ +....+ +...+-+.++|..|+.+|-.+||++.+++++
T Consensus 232 HPmra-----LF-~IpRNPPPkLkrp-----------------~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 232 HPMRA-----LF-LIPRNPPPKLKRP-----------------KKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred chhhh-----hc-cCCCCCCccccch-----------------hhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 33211 00 111111 111111 1111222337778999999999999998764
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.7e-33 Score=296.87 Aligned_cols=273 Identities=23% Similarity=0.301 Sum_probs=195.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCc-ccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDF-KNM 528 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~ 528 (767)
..++|++.+.||+|++|.||+|.+. +++.||+|++... .....+.+.+|+.++++++|||++++.+++...+. ...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 4578999999999999999999976 4889999988543 22334667889999999999999999987543222 223
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
...++|+||+ +++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~d 161 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILD 161 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcc
Confidence 3579999998 56999998753 389999999999999999999998 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhh
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVES 687 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 687 (767)
||.+...... .....++..|+|||.+.+ ..++.++||||+|+++|++++|+.||....... ...... .
T Consensus 162 fg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~-~ 230 (343)
T cd07851 162 FGLARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIM-N 230 (343)
T ss_pred cccccccccc---------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH-H
Confidence 9999764321 123357888999998765 367889999999999999999999996532211 111111 0
Q ss_pred hcccc----hhhhccHHHHHhhhcchh----hHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 688 NFPKN----AQQVLDRELRQLMMSSES----QTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 688 ~~~~~----~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..+.. ............+...+. ............+.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 231 LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 01000 011111111111110000 0001111112334458889999999999999999874
No 376
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.4e-33 Score=286.70 Aligned_cols=255 Identities=25% Similarity=0.285 Sum_probs=189.8
Q ss_pred CCCCCCccccccceEEEEEEeC----CCcEEEEEEeeccC----CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcc
Q 004218 456 NFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIES----TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFK 526 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 526 (767)
+|++.+.||+|++|.||+++.. +++.||||++.... ....+.+.+|+++++++ +||||+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4788899999999999999853 47889999986432 22345678999999999 599999999884 4
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEE
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKV 606 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl 606 (767)
.+...++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 5567799999999999999986533 388999999999999999999998 9999999999999999999999
Q ss_pred ccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC--CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhH
Q 004218 607 GDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK--PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 607 ~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 684 (767)
+|||++......... ......|+..|+|||...+.. .+.++||||+|+++|+|++|..||....... .....
T Consensus 147 ~dfg~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~ 220 (288)
T cd05583 147 TDFGLSKEFLAEEEE-----RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEI 220 (288)
T ss_pred EECcccccccccccc-----ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHH
Confidence 999998765332111 112345788999999987655 6889999999999999999999985321110 00000
Q ss_pred hhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 685 VESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 685 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
... .......... .+...+.+++.+||+.||++|||+.++.+.|+.
T Consensus 221 ~~~----------------~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 221 SRR----------------ILKSKPPFPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HHH----------------HHccCCCCCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 000 0000000000 011122336778999999999998877666543
No 377
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-33 Score=271.23 Aligned_cols=274 Identities=23% Similarity=0.324 Sum_probs=211.8
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEEEeCC------CcEEEEEEeecc-CCcchhhHHHHHHHHhcCCCCCceeEEee
Q 004218 447 YDELRRATGNFSHENLIGSGSFGSVYKGYLRE------GISVAVKVLDIE-STGTWKSFFAECEALRNTRHRNLVKLITS 519 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 519 (767)
.+++.....+++....+.+|.||.||.|.|++ .+.|-+|.++.. ++-....++.|.-.+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 35666667788888899999999999997763 345667766432 33345668889989999999999999999
Q ss_pred eecCCcccceeeEEEEeecCCCChhhhhcccCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCee
Q 004218 520 CSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNE--HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNIL 597 (767)
Q Consensus 520 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 597 (767)
+.. +....++++.++.-|+|..|+...+..+ ..+.++..+...++.|++.|++|||++ +|||.||.++|.+
T Consensus 356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCV 428 (563)
T ss_pred Eee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcce
Confidence 853 4556689999999999999998555332 234577888899999999999999999 9999999999999
Q ss_pred eCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCCCCCccc
Q 004218 598 LDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSPTHESFA 676 (767)
Q Consensus 598 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~ 676 (767)
||+..++||+|=.+++.+.+......... ......|||||.+....|+.++||||||+++|||+| |+.|+.+..+
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGDn----EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP 504 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGDN----ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP 504 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCCC----CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH
Confidence 99999999999999998876554433322 224577999999999999999999999999999998 8999866433
Q ss_pred CCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHHH
Q 004218 677 GEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKIL 755 (767)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~~ 755 (767)
.+ +..+.+..++- .+...|..+++. ++..||..+|++||+.+|++.-|.+.....
T Consensus 505 fE--m~~ylkdGyRl---------------------aQP~NCPDeLf~-vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 505 FE--MEHYLKDGYRL---------------------AQPFNCPDELFT-VMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred HH--HHHHHhcccee---------------------cCCCCCcHHHHH-HHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 22 22222222221 122233344444 777899999999999999999998876544
No 378
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=285.25 Aligned_cols=195 Identities=33% Similarity=0.464 Sum_probs=167.8
Q ss_pred CCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 460 ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
.++||+|.||+||-|+++ +|+.||||++++. .++...++.+|+.||+++.||.||.+.-. ++..+.+++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 578999999999999976 5999999999754 34456788999999999999999999887 456678899999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC---CceEEccccchh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED---MTAKVGDFGLAR 613 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~ 613 (767)
-+.| +..+++-... ..++++.....++.||+.||.|||.+ +|||+||||+|||+.+. -++||||||+|+
T Consensus 644 Kl~G-DMLEMILSsE----kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KLHG-DMLEMILSSE----KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hhcc-hHHHHHHHhh----cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 9955 6666554433 23499999999999999999999999 99999999999999754 479999999999
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++++.. ....++||+.|+|||++..+.|...-|+||.|+|+|.-++|..||.+.
T Consensus 716 iIgEks-------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 716 IIGEKS-------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred ecchhh-------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 987642 235678999999999999999999999999999999999999999654
No 379
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-34 Score=310.56 Aligned_cols=209 Identities=27% Similarity=0.343 Sum_probs=181.2
Q ss_pred HHHHHHHhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeec---cCCcchhhHHHHHHHHhcCCCCCceeEEeeeec
Q 004218 447 YDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDI---ESTGTWKSFFAECEALRNTRHRNLVKLITSCSS 522 (767)
Q Consensus 447 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 522 (767)
..+++-....|.++++||+|+||.|..++.+. ++.||+|++.+ -.......|..|-.+|...+.+-|+.++.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 34566667789999999999999999999764 88999999865 234556778899999999999999999877
Q ss_pred CCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 004218 523 LDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM 602 (767)
Q Consensus 523 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 602 (767)
|.+..++|+|||||+||+|-.++.... ++++.-+..++..|..||.-+|+. |+|||||||+|||+|..|
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccC
Confidence 778899999999999999999998765 399999999999999999999999 999999999999999999
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccC----C-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGL----G-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
++||+|||.+-.+..+.. ......+|||-|.|||++. + +.|++.+|+||+||++|||+.|..||+..
T Consensus 213 HikLADFGsClkm~~dG~-----V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad 284 (1317)
T KOG0612|consen 213 HIKLADFGSCLKMDADGT-----VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD 284 (1317)
T ss_pred cEeeccchhHHhcCCCCc-----EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence 999999999987754322 1224567999999999875 2 56899999999999999999999999653
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-32 Score=308.58 Aligned_cols=263 Identities=27% Similarity=0.444 Sum_probs=204.8
Q ss_pred hcCCCCCCccccccceEEEEEEeCC--------CcEEEEEEeecc-CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecC
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE--------GISVAVKVLDIE-STGTWKSFFAECEALRNT-RHRNLVKLITSCSSL 523 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 523 (767)
..+..+.+.+|+|.||.||+|.... ...||||..+.. .....+.+..|+++|+.+ +|+||+.++|+|..
T Consensus 295 ~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~- 373 (609)
T KOG0200|consen 295 RENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ- 373 (609)
T ss_pred hhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc-
Confidence 3444566799999999999998431 456999998644 334567899999999999 59999999999864
Q ss_pred CcccceeeEEEEeecCCCChhhhhcccC---------CCCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCC
Q 004218 524 DFKNMEFLALVYEFLGNGSLGDWIHGER---------KNEHG-NGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKP 593 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 593 (767)
.+..++|+||++.|+|.++++..+ ..... ..++..+.+.++.|||.|++||++. ++||||+.+
T Consensus 374 ----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAa 446 (609)
T KOG0200|consen 374 ----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAA 446 (609)
T ss_pred ----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhh
Confidence 566799999999999999999877 11111 2499999999999999999999999 999999999
Q ss_pred CCeeeCCCCceEEccccchhhhhhhcCCCccccccccccC--CCCccCccccCCCCCCCcccchhhhHHHHHHHh-CCCC
Q 004218 594 GNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKG--SIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT-GMSP 670 (767)
Q Consensus 594 ~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p 670 (767)
+||+++++..+||+|||+|+...+....... ...| ...|||||.+....|+.++||||||+++||++| |..|
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~-----~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P 521 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYRTK-----SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP 521 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceEec-----CCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence 9999999999999999999865443222111 1111 345999999999999999999999999999999 7788
Q ss_pred CCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHH
Q 004218 671 THESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKN 750 (767)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~ 750 (767)
|... .....+.++.+.......+..+.+.+.. ++..||+.+|++||++.|+.+.++.
T Consensus 522 Yp~~-~~~~~l~~~l~~G~r~~~P~~c~~eiY~----------------------iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 522 YPGI-PPTEELLEFLKEGNRMEQPEHCSDEIYD----------------------LMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred CCCC-CcHHHHHHHHhcCCCCCCCCCCCHHHHH----------------------HHHHHhCCCcccCCCHHHHHHHHHH
Confidence 8652 2122234445444444444444444433 5667999999999999999999998
Q ss_pred HH
Q 004218 751 AQ 752 (767)
Q Consensus 751 ~~ 752 (767)
..
T Consensus 579 ~l 580 (609)
T KOG0200|consen 579 HL 580 (609)
T ss_pred HH
Confidence 53
No 381
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.7e-32 Score=283.36 Aligned_cols=198 Identities=28% Similarity=0.379 Sum_probs=163.8
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCC-cchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST-GTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|++.+.||+|++|.||+|...+ ++.||+|.+..... .......+|+..+++++ |||++++++++. .+...++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcEEE
Confidence 6778999999999999999764 78999999864322 22334567999999998 999999999854 3567799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||+ +|+|.+++.... ...+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 779999887643 23489999999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCC-CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLG-EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
....... .....++..|+|||++.+ ..++.++||||||+++|+|++|+.||...
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 148 EIRSRPP-------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred eccCCCC-------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 5533211 122357889999998754 45789999999999999999999998554
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.3e-32 Score=280.33 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=186.3
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc-----CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE-----STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
+|.+.+.||+|+||.||++.+.. +..+++|+.+.. ......++..|+.+++.++||||+++++++. +..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-----ERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh-----cCC
Confidence 58889999999999999999754 455666665321 1223345678999999999999999999853 345
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
..++||||+++++|.+++...... ...+++.+++.++.|++.|++|||+. +++|+||+|+||++++ +.++|+||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 679999999999999988653221 34589999999999999999999998 9999999999999975 56999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
|.+........ ......|+..|+|||...+..++.++|+||+|+++|+|++|..||..... ...........
T Consensus 150 g~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~ 221 (260)
T cd08222 150 GVSRLLMGSCD------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIVEGP 221 (260)
T ss_pred CceeecCCCcc------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHcCC
Confidence 99876533211 11234578899999998888889999999999999999999999854211 00101100000
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..... +.....+.+++.+||+.||++||++.|++++
T Consensus 222 ~~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 222 TPSLP----------------------ETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCCc----------------------chhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 00000 0111122337778999999999999999864
No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-34 Score=278.77 Aligned_cols=212 Identities=29% Similarity=0.413 Sum_probs=175.5
Q ss_pred HhcCCCCCCccccccceEEEEEEe-CCCcEEEEEEeecc-C------CcchhhHHHHHHHHhcCCCCCceeEEeeeecCC
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIE-S------TGTWKSFFAECEALRNTRHRNLVKLITSCSSLD 524 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~-~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 524 (767)
..++|-..++||+|||+.||+|.+ ...+.||||+-... + ..-.+...+|.+|.+.+.||.||++|+++.-
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl-- 538 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL-- 538 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee--
Confidence 345788888999999999999995 45889999986422 1 1123456789999999999999999999752
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC---CC
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD---ED 601 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~---~~ 601 (767)
+...+|-|+|||+|.+|+-|+...+. +++.++..|+.||+.||.||.+. .++|||-||||.|||+- .-
T Consensus 539 --DtdsFCTVLEYceGNDLDFYLKQhkl------mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 539 --DTDSFCTVLEYCEGNDLDFYLKQHKL------MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred --ccccceeeeeecCCCchhHHHHhhhh------hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCccc
Confidence 34567999999999999999987664 99999999999999999999997 67999999999999995 34
Q ss_pred CceEEccccchhhhhhhcCC-CccccccccccCCCCccCccccCC----CCCCCcccchhhhHHHHHHHhCCCCCCCcc
Q 004218 602 MTAKVGDFGLARSLLERIGN-QSSISSTHVLKGSIGYIPPEYGLG----EKPSTAGDVYSFGVMLLEIFTGMSPTHESF 675 (767)
Q Consensus 602 ~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 675 (767)
|.+||+|||+++.+.+.... ......+...+||.+|++||.+.- .+++.++||||.|||+|.++.|+.||....
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnq 688 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQ 688 (775)
T ss_pred ceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCch
Confidence 78999999999998766544 333344566789999999997653 346889999999999999999999997643
No 384
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=3.8e-32 Score=280.73 Aligned_cols=198 Identities=30% Similarity=0.436 Sum_probs=166.5
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC--CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES--TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
|+..+.||+|++|.||+|+... ++.||+|++.... ....+.+.+|+++++.++|+|++++++++. .....++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 5677889999999999999764 8999999987543 334567788999999999999999999854 3467799
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~~-~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 59999997652 2389999999999999999999999 99999999999999999999999999997
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
....... ......++..|+|||.+.+. .++.++||||+|+++||+++|+.||...
T Consensus 147 ~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 202 (282)
T cd07829 147 AFGIPLR------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD 202 (282)
T ss_pred ccCCCcc------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 6533211 11223357789999998766 7899999999999999999999998553
No 385
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.7e-32 Score=275.42 Aligned_cols=192 Identities=35% Similarity=0.440 Sum_probs=164.6
Q ss_pred cccccceEEEEEEeC-CCcEEEEEEeeccCC---cchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeec
Q 004218 463 IGSGSFGSVYKGYLR-EGISVAVKVLDIEST---GTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 463 lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
||+|+||.||++... +++.||+|++..... .....+..|++++++++|||++++++.+ ..+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 689999999999976 488999999865432 2455788999999999999999999884 4566789999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLER 618 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 618 (767)
++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999997653 389999999999999999999998 9999999999999999999999999999765332
Q ss_pred cCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 619 IGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 619 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
. .......++..|+|||...+...+.++|+||||+++|++++|+.||...
T Consensus 147 ~------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 196 (250)
T cd05123 147 G------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196 (250)
T ss_pred C------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 1 1123445788999999998888899999999999999999999999553
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=286.70 Aligned_cols=242 Identities=25% Similarity=0.309 Sum_probs=190.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCccccee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.+..|.....+|.|+|+.|-.+... +++..++|++.... .+..+|+.++... .||||+++.+. +.++.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v-----~~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDV-----YEDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecce-----ecCCce
Confidence 3567888888999999999999865 58889999996542 2334677666655 79999999999 456778
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee-CCCCceEEccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL-DEDMTAKVGDF 609 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~-~~~~~~kl~Df 609 (767)
.|+|||.+.|+-+.+.+...+ ....++..|+.+|+.|+.|||++ ||||||+||+|||+ ++.++++|+||
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP-------EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred eeeeehhccccHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 899999999998888887654 33377888999999999999999 99999999999999 68999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
|.++..... ....+-|..|.|||++....+++++||||||+++|+|++|+.||.....+ ..
T Consensus 461 G~a~~~~~~---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~e--------- 521 (612)
T KOG0603|consen 461 GFWSELERS---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IE--------- 521 (612)
T ss_pred chhhhCchh---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HH---------
Confidence 999876543 12234578899999999999999999999999999999999999765433 11
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRL 748 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L 748 (767)
+...+.. ....+.+....++++..||+.||.+||+|.|+..+=
T Consensus 522 -----------i~~~i~~-----~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~ 564 (612)
T KOG0603|consen 522 -----------IHTRIQM-----PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHP 564 (612)
T ss_pred -----------HHHhhcC-----CccccccCHHHHHHHHHhccCChhhCcChhhhccCc
Confidence 1111111 001133344445577789999999999999997653
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1e-34 Score=267.97 Aligned_cols=254 Identities=24% Similarity=0.288 Sum_probs=187.3
Q ss_pred CCccccccceEEEEEEeC-CCcEEEEEEeeccCC-cchhhHHHHHHHHhc-CCCCCceeEEeeeecCCcccceeeEEEEe
Q 004218 460 ENLIGSGSFGSVYKGYLR-EGISVAVKVLDIEST-GTWKSFFAECEALRN-TRHRNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
...||.|+||+|++..++ .|+..|||+++.... ...++++.|.+...+ -+.||||+++|+++. .+..|+.||
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGdcWiCME 143 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGDCWICME 143 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCceeeeHH
Confidence 357999999999999976 499999999976544 556788888886544 479999999999743 344689999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLL 616 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 616 (767)
.|.- |++.+...-. ......+++.-.-.|+.....||.||.+. ..|+|||+||+|||++..|.+||||||.+..+.
T Consensus 144 LMd~-SlDklYk~vy-~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 144 LMDI-SLDKLYKRVY-SVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred HHhh-hHHHHHHHHH-HHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 9954 7766543211 11134488888889999999999999875 489999999999999999999999999998775
Q ss_pred hhcCCCccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchh
Q 004218 617 ERIGNQSSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQ 694 (767)
Q Consensus 617 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 694 (767)
+.... +..+|...|||||.+.. ..|+-++||||+|+++||+.||+.||.....-..++...+.+..|.-..
T Consensus 220 ~SiAk-------T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 220 DSIAK-------TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLF 292 (361)
T ss_pred HHHHh-------hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecC
Confidence 54322 34468889999998864 3478899999999999999999999866433333333333333332111
Q ss_pred hhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 695 QVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 695 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.. ........+.. ++--|+.+|-+.||...++.++
T Consensus 293 ~~--------------~~~~~s~~~~~----fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 293 DK--------------ECVHYSFSMVR----FINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cc--------------cccccCHHHHH----HHHHHhhcccccCcchhhhhcC
Confidence 10 00111111222 5557999999999999998764
No 388
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=3.4e-32 Score=309.95 Aligned_cols=145 Identities=31% Similarity=0.424 Sum_probs=127.9
Q ss_pred cCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC---CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES---TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
++|++.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.+++.++||||+++++++ ....+
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECCE
Confidence 67999999999999999999976 58999999986432 22346788899999999999999999884 34567
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+|+||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 899999999999999997543 288899999999999999999998 99999999999999999999999999
Q ss_pred chh
Q 004218 611 LAR 613 (767)
Q Consensus 611 ~a~ 613 (767)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 986
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.98 E-value=3.1e-32 Score=302.08 Aligned_cols=274 Identities=21% Similarity=0.213 Sum_probs=168.3
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC-----CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecC-Ccc
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE-----GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSL-DFK 526 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~-~~~ 526 (767)
..++|.+.+.||+|+||.||+|.+.+ +..||+|.+..... .+....| .++...+.++..++..+... ...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 56789999999999999999999753 68999998753221 1111111 12222233333322221111 113
Q ss_pred cceeeEEEEeecCCCChhhhhcccCCC--------------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCC
Q 004218 527 NMEFLALVYEFLGNGSLGDWIHGERKN--------------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLK 592 (767)
Q Consensus 527 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 592 (767)
.+...++||||+++++|.+++...... ..........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 456789999999999999998754210 0001122345678999999999999999 99999999
Q ss_pred CCCeeeCC-CCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCC----------------------CCC
Q 004218 593 PGNILLDE-DMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE----------------------KPS 649 (767)
Q Consensus 593 p~NIl~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~ 649 (767)
|+|||++. ++.+||+|||+|+....... .......+++.|+|||.+... .++
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~-----~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN-----YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc-----cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 99999985 58999999999976532211 112345689999999965322 234
Q ss_pred CcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcch----hhHHHHHHHHHHHHHH
Q 004218 650 TAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSE----SQTIQLHDCLITIIES 725 (767)
Q Consensus 650 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~ 725 (767)
.++||||+||++|||+++..|++.... .+....... .... ..+........ ....+..+.......+
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~---~~~~~l~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~d 428 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLI---QFNRQLKRN-DYDL-----VAWRKLVEPRASPDLRRGFEVLDLDGGAGWE 428 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHH---HHHHHHHhc-CCcH-----HHHHHhhccccchhhhhhhhhccccchHHHH
Confidence 467999999999999998776543211 111111000 0000 00000000000 0000111111111223
Q ss_pred HhccccCCCCCCCCCHHHHHHH
Q 004218 726 VGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 726 l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
++.+|++.||++|||++|++++
T Consensus 429 Li~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 429 LLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred HHHHHccCCcccCCCHHHHhCC
Confidence 7779999999999999999986
No 390
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=9e-33 Score=269.65 Aligned_cols=203 Identities=27% Similarity=0.373 Sum_probs=173.1
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 528 (767)
...|..+.+||+|+||.|.+|.-+. .+.+|||+++++ ..++.+.-+.|-++|... +-|.++++..+ +...
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQTm 422 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQTM 422 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhhh
Confidence 4578889999999999999998664 678999998755 233445556777777766 57788888877 5677
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
+.+|+||||+.||+|--.+++.++ +.+..+..+|..||-||-+||++ ||+.||||.+||+++.+|++||+|
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~Gk------FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~D 493 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVGK------FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIAD 493 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhcc------cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeee
Confidence 788999999999999998887664 77888999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
||+++.- ......+.+++||+.|+|||++...+|+.++|+||||+++|||+.|++||+....
T Consensus 494 FGmcKEn------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 494 FGMCKEN------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ccccccc------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 9999742 2223345678999999999999999999999999999999999999999987543
No 391
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=8.9e-32 Score=269.60 Aligned_cols=180 Identities=24% Similarity=0.201 Sum_probs=150.1
Q ss_pred ccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCCCChh
Q 004218 466 GSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLG 544 (767)
Q Consensus 466 G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 544 (767)
|.+|.||++.+. +++.||+|.+.... .+.+|...+....|||++++++++. .....++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHH
Confidence 899999999975 58899999986432 2234555555667999999999853 456779999999999999
Q ss_pred hhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCcc
Q 004218 545 DWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624 (767)
Q Consensus 545 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 624 (767)
+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----- 139 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----- 139 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----
Confidence 9986543 289999999999999999999998 99999999999999999999999999886543211
Q ss_pred ccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 625 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
....++..|+|||...+..++.++||||+|+++|||++|+.|+..
T Consensus 140 ----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 140 ----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 122356779999999888899999999999999999999988743
No 392
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-33 Score=280.13 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=176.8
Q ss_pred hcCCCCCCccccccceEEEEEEeCCCc-EEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLREGI-SVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 529 (767)
..+++++..||-|+||.|-++..+... .+|+|++++. .+...+.+..|-++|...+.|.||++|-. +.+..
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccch
Confidence 345666778999999999999976433 4888887543 45566778899999999999999999987 67888
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
++|+.||-|-||.++..++..+. ++..++..++..+++|++|||++ +||.|||||+|.+++.+|-+||.||
T Consensus 494 yvYmLmEaClGGElWTiLrdRg~------Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDF 564 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRGS------FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDF 564 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcCC------cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeeh
Confidence 99999999999999999987654 88889999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
|+|+.+... ..+.+++||+.|.|||++.....+.++|.||+|+++||+++|.+||...
T Consensus 565 GFAKki~~g-------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 565 GFAKKIGSG-------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred hhHHHhccC-------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 999987543 4467889999999999999999999999999999999999999999663
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=244.68 Aligned_cols=222 Identities=23% Similarity=0.303 Sum_probs=175.7
Q ss_pred HHhcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccC-CcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIES-TGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 528 (767)
...+.......||+|++|.|-+.++. +|+..|+|.+...- ....++.++|+.+..+. .+|.+|.++|.. .+.
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~-----~re 117 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL-----FRE 117 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh-----hcc
Confidence 33344555678999999999988864 59999999997553 34456778888876554 799999999974 455
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+++.||.|.. ||+.+-..--. .+..+++.-.-+|+..+.+||.|||++ ..++|||+||+|||++.+|++|+||
T Consensus 118 gdvwIcME~M~t-Sldkfy~~v~~--~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCD 192 (282)
T KOG0984|consen 118 GDVWICMELMDT-SLDKFYRKVLK--KGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICD 192 (282)
T ss_pred ccEEEeHHHhhh-hHHHHHHHHHh--cCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcc
Confidence 678999999965 88877654322 245699999999999999999999997 4899999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCC----CCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhH
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG----EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 684 (767)
||.+-.+.+.... +...|...|||||.+.. ..|+-++||||+|+++.||.+++.||+.......++.+.
T Consensus 193 FGIsG~L~dSiAk-------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv 265 (282)
T KOG0984|consen 193 FGISGYLVDSIAK-------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV 265 (282)
T ss_pred cccceeehhhhHH-------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence 9999877554322 22457889999998753 368899999999999999999999998876666666555
Q ss_pred hhhhcc
Q 004218 685 VESNFP 690 (767)
Q Consensus 685 ~~~~~~ 690 (767)
++...|
T Consensus 266 Veep~P 271 (282)
T KOG0984|consen 266 VEEPSP 271 (282)
T ss_pred hcCCCC
Confidence 554433
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=292.44 Aligned_cols=246 Identities=28% Similarity=0.395 Sum_probs=186.6
Q ss_pred CCccccccce-EEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeEEEEee
Q 004218 460 ENLIGSGSFG-SVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLALVYEF 537 (767)
Q Consensus 460 ~~~lg~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 537 (767)
.+.+|.|+.| .||+|... |+.||||++- .+....+.+|+..++.- +|||||++++. ..+..+.||+.|.
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll---~e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YIalEL 584 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE-GREVAVKRLL---EEFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYIALEL 584 (903)
T ss_pred HHHcccCCCCcEEEEEeeC-CceehHHHHh---hHhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEEEehH
Confidence 4568899987 57999997 8899999884 23345677999999988 69999999987 6677888999999
Q ss_pred cCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC---C--CceEEccccch
Q 004218 538 LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE---D--MTAKVGDFGLA 612 (767)
Q Consensus 538 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---~--~~~kl~Dfg~a 612 (767)
|.. +|.+++...... .........+.+..|+++||+|||+. +||||||||.||||+. + .+++|+|||++
T Consensus 585 C~~-sL~dlie~~~~d--~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgls 658 (903)
T KOG1027|consen 585 CAC-SLQDLIESSGLD--VEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLS 658 (903)
T ss_pred hhh-hHHHHHhccccc--hhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccc
Confidence 966 999999875211 11112145678899999999999998 9999999999999975 2 57999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhC-CCCCCCcccCCcchhhHhhhhccc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTG-MSPTHESFAGEVSLVKWVESNFPK 691 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~ 691 (767)
+.+.... .+........||-+|+|||++....-+.++||||+||++|+.++| ..||.+....+.++..-......
T Consensus 659 Kkl~~~~---sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~- 734 (903)
T KOG1027|consen 659 KKLAGGK---SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVH- 734 (903)
T ss_pred cccCCCc---chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceee-
Confidence 9876543 223335667899999999999998889999999999999999986 89998765544333221110000
Q ss_pred chhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 692 NAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 692 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
.+ ...++ ..+++|.+|++++|..||+|.+|+.+
T Consensus 735 --L~------------------~~~d~---eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 735 --LE------------------PLPDC---EAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred --ec------------------cCchH---HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 00 00011 23348889999999999999998753
No 395
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.97 E-value=8e-35 Score=283.56 Aligned_cols=354 Identities=32% Similarity=0.481 Sum_probs=246.9
Q ss_pred ccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeec
Q 004218 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIG 83 (767)
Q Consensus 4 L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (767)
|..|++++|.+. ++|.+++. +-.|..|+..+|++. .+|+.+.++.+|..|++.+|+++ ..|+..-+++.|++|+..
T Consensus 116 l~~l~~s~n~~~-el~~~i~~-~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~ 191 (565)
T KOG0472|consen 116 LVKLDCSSNELK-ELPDSIGR-LLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCN 191 (565)
T ss_pred hhhhhcccccee-ecCchHHH-Hhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccc
Confidence 444455555554 45544443 444455555555554 34444455555555555555554 222222225555555555
Q ss_pred CccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCcc-ccCCCCCCEEECc
Q 004218 84 FNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTS-IGRLRSLTLLNLS 162 (767)
Q Consensus 84 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~-l~~l~~L~~L~l~ 162 (767)
.|-+. .+|..++.+.+|.-|+|..|++. .+| .|..+.. |.+|+++.|+|+ .+|.. ..++++|.+|||+
T Consensus 192 ~N~L~-------tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~-L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 192 SNLLE-------TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSL-LKELHVGENQIE-MLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred hhhhh-------cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHH-HHHHHhcccHHH-hhHHHHhcccccceeeecc
Confidence 55554 45566777788888888888887 666 6667766 888888888887 44444 4478888888888
Q ss_pred CCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCC--------------------------
Q 004218 163 YNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELAS-------------------------- 216 (767)
Q Consensus 163 ~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-------------------------- 216 (767)
+|+++ +.|+.+..+.+|+.||+++|.|+ .+|..++++ .|+.|.+.+|++..
T Consensus 261 dNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dgl 337 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGL 337 (565)
T ss_pred ccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCC
Confidence 88888 67788888888888888888888 567777887 78888888887520
Q ss_pred ----------------------------------------------------------------CCcccccCcccc-ccc
Q 004218 217 ----------------------------------------------------------------EIPTSFGNFQNL-LSI 231 (767)
Q Consensus 217 ----------------------------------------------------------------~~~~~~~~l~~L-~~L 231 (767)
..|..+..+..+ +.+
T Consensus 338 S~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l 417 (565)
T KOG0472|consen 338 SQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDL 417 (565)
T ss_pred CCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHH
Confidence 011111111222 234
Q ss_pred cccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccc
Q 004218 232 DLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKF 311 (767)
Q Consensus 232 ~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l 311 (767)
.+++|.++ .+|..+..++++ ..++|++|.+. .+|..++.+..|+.|++|.|++. ..|..+-.+..|+.+-.++|++
T Consensus 418 ~lsnn~is-fv~~~l~~l~kL-t~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi 493 (565)
T KOG0472|consen 418 VLSNNKIS-FVPLELSQLQKL-TFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQI 493 (565)
T ss_pred HhhcCccc-cchHHHHhhhcc-eeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccc
Confidence 55666666 899999999999 55599999998 78899999999999999999998 7888888888888888888999
Q ss_pred cCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCCccc-cccccccccCCc
Q 004218 312 SGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPREGIF-RHTSMVHLEGNP 381 (767)
Q Consensus 312 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-~~~~~~~l~~Np 381 (767)
....+..+..+.+|..|||.+|.+. .+|..+++|.+|++|.++||++. .|+....+ ++...+.+.+++
T Consensus 494 ~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~iLmkgT~aiL~ylrdr 562 (565)
T KOG0472|consen 494 GSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQILMKGTAAILSYLRDR 562 (565)
T ss_pred cccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHHHhccChHHHHHHhccc
Confidence 9777888999999999999999998 88999999999999999999999 44443222 223334444443
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-31 Score=251.21 Aligned_cols=200 Identities=28% Similarity=0.384 Sum_probs=174.6
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc---CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE---STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 528 (767)
...|...++||+|+|+.|-.+++. +.+.||+|+++++ ..++....+.|-.+..+. +||.+|.+..+ +...
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hccc
Confidence 457889999999999999999965 5888999999765 344556677788888776 79999999887 5667
Q ss_pred eeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcc
Q 004218 529 EFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGD 608 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~D 608 (767)
..+++|.||++||+|--++++.++ ++++.+..+...|..||.|||++ ||+.||+|.+||++|..|++||+|
T Consensus 324 srlffvieyv~ggdlmfhmqrqrk------lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRK------LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhc------CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 788999999999999877776554 99999999999999999999999 999999999999999999999999
Q ss_pred ccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 609 FGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 609 fg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
+|+++.-. .....+.+++||+.|.|||++.+..|+..+|+|++|++++||+.|+.||+.
T Consensus 395 ygmcke~l------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 395 YGMCKEGL------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred cchhhcCC------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 99997532 223345678999999999999999999999999999999999999999975
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.2e-30 Score=279.16 Aligned_cols=212 Identities=22% Similarity=0.296 Sum_probs=154.8
Q ss_pred HhcCCCCCCccccccceEEEEEEe-----------------CCCcEEEEEEeeccCCcchhh--------------HHHH
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYL-----------------REGISVAVKVLDIESTGTWKS--------------FFAE 501 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~e 501 (767)
..++|++.++||+|+||.||+|.. ..++.||||.+........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235689999986543322223 3346
Q ss_pred HHHHhcCCCCC-----ceeEEeeeecCC---cccceeeEEEEeecCCCChhhhhcccCCC------------------CC
Q 004218 502 CEALRNTRHRN-----LVKLITSCSSLD---FKNMEFLALVYEFLGNGSLGDWIHGERKN------------------EH 555 (767)
Q Consensus 502 ~~~l~~l~h~n-----iv~~~~~~~~~~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~ 555 (767)
+.++.+++|.+ +++++++|.... ....+..++||||+++++|.++++..... ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 66777776554 467777765321 11234579999999999999998753210 01
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCC
Q 004218 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635 (767)
Q Consensus 556 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~ 635 (767)
...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++......... ......+|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-----~~~~g~~tp 374 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-----NPLYGMLDP 374 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-----CccccCCCc
Confidence 12357788999999999999999998 9999999999999999999999999999754322110 111223478
Q ss_pred CccCccccCCCCC----------------------CCcccchhhhHHHHHHHhCCC-CCC
Q 004218 636 GYIPPEYGLGEKP----------------------STAGDVYSFGVMLLEIFTGMS-PTH 672 (767)
Q Consensus 636 ~y~aPE~~~~~~~----------------------~~~~Dv~slG~il~el~tg~~-p~~ 672 (767)
.|+|||.+..... ..+.||||+||++|+|++|.. |+.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 9999998754321 124799999999999999885 654
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-30 Score=258.94 Aligned_cols=136 Identities=28% Similarity=0.442 Sum_probs=115.5
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCC-----C---CCceeEEeeeecCC
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTR-----H---RNLVKLITSCSSLD 524 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~~~ 524 (767)
.++|.+.++||-|-|++||+|.+.. .+.||+|+.+.. ..-.+..+.||++|++++ | ..||++++.|...
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs- 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS- 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-
Confidence 3789999999999999999999764 788999998632 233456788999999883 2 4699999987654
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeee
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
-+++.++|+|+|+. |-+|..+|..... ++++...+.+|++|++.||.|||..| ||||-||||+|||+
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~Y----rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNY----RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCC----CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 36788999999999 5699999987653 45999999999999999999999986 99999999999998
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4e-30 Score=259.19 Aligned_cols=238 Identities=34% Similarity=0.425 Sum_probs=184.8
Q ss_pred cceEEEEEEeCC-CcEEEEEEeeccCCcc-hhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCCCChh
Q 004218 467 SFGSVYKGYLRE-GISVAVKVLDIESTGT-WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLG 544 (767)
Q Consensus 467 ~~g~V~~~~~~~-~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 544 (767)
+||.||+|...+ ++.||+|++....... .+.+.+|++.+++++|+|++++++++.. +...++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 589999999874 8999999997654444 6789999999999999999999998643 35679999999999999
Q ss_pred hhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCcc
Q 004218 545 DWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSS 624 (767)
Q Consensus 545 ~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~ 624 (767)
+++..... +++..++.++.+++.++.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 76 ~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRGR------LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhccC------CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 99876432 88999999999999999999999 99999999999999999999999999998654321
Q ss_pred ccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHh
Q 004218 625 ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQL 704 (767)
Q Consensus 625 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 704 (767)
......++..|+|||...+..++.++||||+|+++|++++|..||...... ....+.............
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~-------- 210 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKKIGKPKPPFPPPE-------- 210 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccCCCCcccc--------
Confidence 123345788999999998888899999999999999999999998653111 111111111111000000
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 705 MMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
..+...+.+++.+|+..+|++||++.++++
T Consensus 211 ------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 211 ------------WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ------------ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000111222777899999999999999986
No 400
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=9.1e-31 Score=268.41 Aligned_cols=212 Identities=25% Similarity=0.324 Sum_probs=175.4
Q ss_pred cCCCCCCccccccceEEEEEEe-CCCcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 455 GNFSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
.-|..++.||-|+||.|.++.- .+...||+|.+++. ..........|-+||...+.+-||++|.. |.+.+.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdn 703 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDN 703 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCc
Confidence 4567778899999999999984 34778999988644 23445567789999999999999999987 667788
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
+|+||||++||++-.++.+.+- +.+.-+..++..+..|+++.|+. |+|||||||+|||||.+|++||+|||
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgI------FeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGI------FEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhcc------CHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 9999999999999999877653 88888899999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCC-------C-----------------------------ccccccccccCCCCccCccccCCCCCCCcccc
Q 004218 611 LARSLLERIGN-------Q-----------------------------SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDV 654 (767)
Q Consensus 611 ~a~~~~~~~~~-------~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv 654 (767)
++.-+...... + ......+..+||..|+|||++....++..+|+
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 98643211100 0 00011134679999999999999999999999
Q ss_pred hhhhHHHHHHHhCCCCCCCcccCCcc
Q 004218 655 YSFGVMLLEIFTGMSPTHESFAGEVS 680 (767)
Q Consensus 655 ~slG~il~el~tg~~p~~~~~~~~~~ 680 (767)
||.|||+|||+.|++||....+.+.+
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq 880 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQ 880 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcce
Confidence 99999999999999999887666543
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.9e-31 Score=239.79 Aligned_cols=265 Identities=20% Similarity=0.262 Sum_probs=196.0
Q ss_pred hcCCCCCCccccccceEEEEEE-eCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.+.|++.+++|+|.++.||.|. ..+.++++||+++. ...+.+.+|+.+++.+. ||||+++++...++ .....
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~Sktp 110 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESKTP 110 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCc---cccCc
Confidence 4678999999999999999999 45688999999863 34577889999999996 99999999987643 34456
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-CceEEcccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-MTAKVGDFG 610 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~~kl~Dfg 610 (767)
.+|+||+.+.+...+... ++..++..++.+++.||.|+|+. ||+|||+||.|++||.. -..+|+|+|
T Consensus 111 aLiFE~v~n~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 111 SLIFEYVNNTDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred hhHhhhhccccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecc
Confidence 899999999888877643 77888999999999999999999 99999999999999954 579999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
+|.++.+.... .....+..|.-||.+..- .|+..-|+|||||++..|+..+.||........++++.++.--
T Consensus 179 LAEFYHp~~eY-------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLG 251 (338)
T KOG0668|consen 179 LAEFYHPGKEY-------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLG 251 (338)
T ss_pred hHhhcCCCcee-------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhC
Confidence 99887554322 334467778999987754 4788999999999999999999998665544445544433211
Q ss_pred ccc-------hhhhccHHHHHhhhcch----------hhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 PKN-------AQQVLDRELRQLMMSSE----------SQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ~~~-------~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
..+ ..-.+++.+..++.... ....-..++..+ ++.+.|.+|..+||||+|++++
T Consensus 252 t~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiD----lldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 252 TDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAID----LLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred hHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHH----HHHHHHhhccccccchHHHhcC
Confidence 110 01112222222211110 001111122333 4557888999999999999875
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.7e-30 Score=264.45 Aligned_cols=199 Identities=25% Similarity=0.370 Sum_probs=170.7
Q ss_pred HhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccC--------CcchhhHHHHHHHHhcCC---CCCceeEEeee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIES--------TGTWKSFFAECEALRNTR---HRNLVKLITSC 520 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---h~niv~~~~~~ 520 (767)
....|+..+.+|.|+||.|++|.++. ...|+||.+.++. ....-.+-.|++||..++ |+||++++++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf- 637 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF- 637 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe-
Confidence 34568999999999999999999875 5679999885431 111223557999999997 9999999999
Q ss_pred ecCCcccceeeEEEEeec-CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC
Q 004218 521 SSLDFKNMEFLALVYEFL-GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 521 ~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~ 599 (767)
|++++++|++||-. +|.+|.+++..... +++.++..|++|++.|+++||++ ||||||||-+||.++
T Consensus 638 ----FEddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd 704 (772)
T KOG1152|consen 638 ----FEDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVD 704 (772)
T ss_pred ----eecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhcccccccc---CceecccccccEEEe
Confidence 67888899999975 56799999987654 99999999999999999999999 999999999999999
Q ss_pred CCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCC-CCcccchhhhHHHHHHHhCCCCCCC
Q 004218 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP-STAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 600 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.+|.+||+|||.|..... .+...++||..|.|||++.+.+| +..-||||+|+++|.++...-||..
T Consensus 705 ~~g~~klidfgsaa~~ks--------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 705 SNGFVKLIDFGSAAYTKS--------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred cCCeEEEeeccchhhhcC--------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999999999976432 33467889999999999999988 7789999999999999999988753
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-31 Score=246.96 Aligned_cols=203 Identities=27% Similarity=0.363 Sum_probs=165.2
Q ss_pred CCCCCccccccceEEEEEEe-CCCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 457 FSHENLIGSGSFGSVYKGYL-REGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.+..+.||-|+||.||.+.+ ++|+.||+|.+... +-...+++.+|++++..++|.|++..++.........-..+|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 44568899999999999996 46999999988533 3345678999999999999999999988754333333345688
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
++|.|.. +|..++-.-. .++...+.-+.+||++||.|||+. +|.||||||.|.+++++-..||||||+++
T Consensus 135 ~TELmQS-DLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHHHh-hhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccc
Confidence 9999854 8888876533 388899999999999999999999 99999999999999999999999999998
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
....+.... ++...-|..|+|||++.+. .|+.+.||||.||++.|++..+..|+..
T Consensus 205 vee~d~~~h-----MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq 261 (449)
T KOG0664|consen 205 TWDQRDRLN-----MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA 261 (449)
T ss_pred ccchhhhhh-----hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence 765432221 1223457889999998875 5899999999999999999988887653
No 404
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=241.08 Aligned_cols=270 Identities=24% Similarity=0.307 Sum_probs=196.0
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCC-cccce
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLD-FKNME 529 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 529 (767)
..+|.-.+.+|.|.- .|-.|.+. .+++||+|..... ....+++..+|...+..+.|+||++++.++.-.. .....
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 457778888999988 56666543 4889999987432 4455778899999999999999999999875433 22334
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccc
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDF 609 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Df 609 (767)
.+|+|||+|.. +|.+.+... ++-.++..|..|++.|++|||+. ||+||||||+||++..+..+||.||
T Consensus 95 e~y~v~e~m~~-nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~df 162 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILME--------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDF 162 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccc
Confidence 67999999965 999988732 67788999999999999999999 9999999999999999999999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
|+|+..+.. -..+....|..|.|||++.+..+.+.+||||.||++.||++|+.-|. +...+.+|.+..-
T Consensus 163 g~ar~e~~~-------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~ 231 (369)
T KOG0665|consen 163 GLARTEDTD-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIE 231 (369)
T ss_pred hhhcccCcc-------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHH
Confidence 999864332 12345668899999999999889999999999999999999998874 3333333332110
Q ss_pred ----c-cchhhhccHHHHHhhhcchhh-HH---------------HHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 690 ----P-KNAQQVLDRELRQLMMSSESQ-TI---------------QLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 690 ----~-~~~~~~~~~~l~~~~~~~~~~-~~---------------~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
| ....+.+.+..+......+.. .. +-...-...+++++.+||..||++|.++++++++
T Consensus 232 ~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 232 QLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0 001111111111111000000 00 0001123455668889999999999999999986
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=1.1e-29 Score=255.19 Aligned_cols=210 Identities=26% Similarity=0.296 Sum_probs=173.3
Q ss_pred ccCHHHHHHHhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCC------CCCceeE
Q 004218 444 MISYDELRRATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTR------HRNLVKL 516 (767)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~ 516 (767)
.+++.--+...++|.+....|+|-|++|..|.+.. |..||||++.. +....+.=++|+++|+++. --|++++
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn-NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN-NEVMHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeec-chHHhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 34444445567899999999999999999999765 88999999963 3334556678999999994 3467777
Q ss_pred EeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCe
Q 004218 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNI 596 (767)
Q Consensus 517 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NI 596 (767)
+.. |...+++|+|+|-+. .+|.+++...+. ..++....+..++.|++.||..|... +|+|.||||+||
T Consensus 500 ~r~-----F~hknHLClVFE~Ls-lNLRevLKKyG~---nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNi 567 (752)
T KOG0670|consen 500 FRH-----FKHKNHLCLVFEPLS-LNLREVLKKYGR---NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNI 567 (752)
T ss_pred HHH-----hhhcceeEEEehhhh-chHHHHHHHhCc---ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccce
Confidence 776 667789999999884 499999988765 45688999999999999999999998 999999999999
Q ss_pred eeCCC-CceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 597 LLDED-MTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 597 l~~~~-~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
||++. ..+||||||.|....+.. .+.+..+..|.|||++.|-+|+...|+||.||++||+.||+..|...
T Consensus 568 LVNE~k~iLKLCDfGSA~~~~ene--------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 568 LVNESKNILKLCDFGSASFASENE--------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred EeccCcceeeeccCcccccccccc--------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 99865 568999999997654431 12233466799999999999999999999999999999999888654
No 406
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=2.3e-29 Score=249.02 Aligned_cols=279 Identities=26% Similarity=0.308 Sum_probs=201.5
Q ss_pred HHHHhcCCCCCCccccccceEEEEEEeC----CCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCC
Q 004218 450 LRRATGNFSHENLIGSGSFGSVYKGYLR----EGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLD 524 (767)
Q Consensus 450 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 524 (767)
+....+.|..+++||.|.|++||++.+. .++.||+|.+...+ ...++.+|+++|..+ .+.||+++.++
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~----- 103 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGC----- 103 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhh-----
Confidence 4445678999999999999999999854 36789999986443 346788999999999 59999999998
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC-CCCc
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD-EDMT 603 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~-~~~~ 603 (767)
+..++.+.+|+||++..+..++... ++..++..+++.++.||+++|+. |||||||||.|++.+ ..++
T Consensus 104 ~rnnd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 104 FRNNDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred hccCCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCC
Confidence 6777888999999999999998865 77889999999999999999999 999999999999998 4578
Q ss_pred eEEccccchhhhhhhcC-----C---------------------------------CccccccccccCCCCccCccccCC
Q 004218 604 AKVGDFGLARSLLERIG-----N---------------------------------QSSISSTHVLKGSIGYIPPEYGLG 645 (767)
Q Consensus 604 ~kl~Dfg~a~~~~~~~~-----~---------------------------------~~~~~~~~~~~gt~~y~aPE~~~~ 645 (767)
-.|+|||+|...+.... . ..........+||++|+|||++..
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 89999999983322110 0 000011123569999999999876
Q ss_pred CC-CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhh----------cccc--hhh--h--ccHHHHHhh---
Q 004218 646 EK-PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESN----------FPKN--AQQ--V--LDRELRQLM--- 705 (767)
Q Consensus 646 ~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~----------~~~~--~~~--~--~~~~l~~~~--- 705 (767)
.+ .++++||||.|+|+..+++++.||.....+...+.+.+.-. .+.. ..+ - ...+++..+
T Consensus 252 ~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~ 331 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETL 331 (418)
T ss_pred ccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhcc
Confidence 54 58899999999999999999999976554443333322110 0000 000 0 001111100
Q ss_pred -----hcchh---hHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 706 -----MSSES---QTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 706 -----~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
...+. ......+....++-++..+|++.||.+|.||+|++++
T Consensus 332 ~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 332 HIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 01011 1222333344344458889999999999999999875
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=6.3e-30 Score=264.69 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=199.2
Q ss_pred hcCCCCCCccccccceEEEEEEeC-CCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLR-EGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
...|....++|+|.+|.||+|++. +++..|+|+++.+...+.+-++.|+-+++..+||||+.+++.+ ......|
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-----lr~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-----LRRDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-----hhhcCcE
Confidence 357888999999999999999965 5999999999988888889999999999999999999999985 3455679
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+.||||.+|+|++.-+.... +++.++..+++..++|++|||+. |-+|||||-.||++++.|.+|+.|||.+
T Consensus 89 icMEycgggslQdiy~~Tgp------lselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTGP------LSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred EEEEecCCCcccceeeeccc------chhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCch
Confidence 99999999999998876553 99999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCCccccccccccCCCCccCcccc---CCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhh-hh
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYG---LGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVE-SN 688 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-~~ 688 (767)
..+..... ....+.||+.|||||+. ..+.|...+|||+.|++..|+-.-++|..+..+. +....+. ..
T Consensus 160 aqitati~------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l~LmTkS~ 231 (829)
T KOG0576|consen 160 AQITATIA------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RALFLMTKSG 231 (829)
T ss_pred hhhhhhhh------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHHHHhhccC
Confidence 87755432 33457799999999975 3567899999999999999998888885332111 1111111 11
Q ss_pred cccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 689 FPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 689 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
+.... +++ .......+..++..|+..+|++|||+..++.
T Consensus 232 ~qpp~-------lkD------------k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 FQPPT-------LKD------------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCc-------ccC------------CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11100 000 0011222333666899999999999987765
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-29 Score=232.39 Aligned_cols=208 Identities=21% Similarity=0.349 Sum_probs=167.5
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceee
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
.+.|++.+.+|+|.||.+-++.++. .+.+|+|.++..- ...++|.+|...--.+ .|.||+.-|++. |...+.+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 4679999999999999999999875 7789999886432 3457888888765555 589999988874 5666788
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC--CCCceEEccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD--EDMTAKVGDF 609 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~--~~~~~kl~Df 609 (767)
.+++||++.|+|.+-+...+ +.+....+++.|+++|+.|||+. .+||||||.+||||- +..++|+|||
T Consensus 98 vF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 99999999999998886543 88889999999999999999999 999999999999994 4458999999
Q ss_pred cchhhhhhhcCCCccccccccccCCCCccCccccCCC-----CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhH
Q 004218 610 GLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGE-----KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKW 684 (767)
Q Consensus 610 g~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 684 (767)
|.++..+... ....-+..|.|||..... ...+.+|||.||+++|.++||+.||+..+..+.....|
T Consensus 168 G~t~k~g~tV---------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~ 238 (378)
T KOG1345|consen 168 GLTRKVGTTV---------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEW 238 (378)
T ss_pred ccccccCcee---------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHH
Confidence 9997654322 122245679999975432 24778999999999999999999998766665555544
Q ss_pred h
Q 004218 685 V 685 (767)
Q Consensus 685 ~ 685 (767)
.
T Consensus 239 ~ 239 (378)
T KOG1345|consen 239 E 239 (378)
T ss_pred H
Confidence 3
No 409
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-30 Score=280.11 Aligned_cols=366 Identities=26% Similarity=0.348 Sum_probs=276.7
Q ss_pred ccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeec
Q 004218 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIG 83 (767)
Q Consensus 4 L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (767)
|+.||||+|++. ..|..+.. +.+|+.|+++.|.|. .+|.+.+++.+|++|.|.+|.+. ..|..+..+.+|++|+++
T Consensus 47 L~~l~lsnn~~~-~fp~~it~-l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 47 LKSLDLSNNQIS-SFPIQITL-LSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eEEeeccccccc-cCCchhhh-HHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 889999999998 89999874 899999999999999 78889999999999999999998 889999999999999999
Q ss_pred CccccCCCCCCcc-------------ccccccCCCCCCEEECcCCcceeecCchhhhhcc------------------cc
Q 004218 84 FNKIVGSGDEGLS-------------FITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSN------------------VL 132 (767)
Q Consensus 84 ~n~l~~~~~~~~~-------------~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~------------------~L 132 (767)
+|++...|.-... ....++. ...+.+++..|.+.+.++..+..+.. .|
T Consensus 123 ~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~-~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l 201 (1081)
T KOG0618|consen 123 FNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQ-TSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANL 201 (1081)
T ss_pred hhccCCCchhHHhhhHHHHHhhhcchhhhhhcc-ccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccch
Confidence 9988655421100 0000111 11333444444433333333332221 03
Q ss_pred CeEEccCCcc--------------------cccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCcccc
Q 004218 133 SKLYMGGNRF--------------------YGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISG 192 (767)
Q Consensus 133 ~~L~l~~n~i--------------------~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~ 192 (767)
+.|.+..|++ ....+. ..-.+|++++++.|+++ .+|+++..+.+|+.|++.+|++.
T Consensus 202 ~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~- 277 (1081)
T KOG0618|consen 202 EVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV- 277 (1081)
T ss_pred hhhhhhhcccceEEecCcchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-
Confidence 3333333332 211111 12357888888888888 56688999999999999999997
Q ss_pred ccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcccccc--------------------
Q 004218 193 SIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSL-------------------- 252 (767)
Q Consensus 193 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l-------------------- 252 (767)
.+|..+..+++|+.|.+..|.++ -+|.....++.|++|+|..|+|. ..|..+......
T Consensus 278 ~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e 355 (1081)
T KOG0618|consen 278 ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEE 355 (1081)
T ss_pred hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccc
Confidence 77888888899999999999997 46667778899999999999988 455433222111
Q ss_pred -----cceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceE
Q 004218 253 -----TTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEV 327 (767)
Q Consensus 253 -----~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 327 (767)
...+.+.+|.++...-..+-++++|+.|+|++|+|.......+.+++.|++|+||+|+++ .+|..+..+..|++
T Consensus 356 ~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~t 434 (1081)
T KOG0618|consen 356 NNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHT 434 (1081)
T ss_pred hhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHH
Confidence 133578888888777778889999999999999999777788899999999999999999 77899999999999
Q ss_pred EEcCCcccCCCCCccccccccCceEeccCCcCcCcCCCC-ccccccccccccCCcCc
Q 004218 328 LDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPRE-GIFRHTSMVHLEGNPKL 383 (767)
Q Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~~~~~~l~~Np~~ 383 (767)
|...+|++. ..| .+..++.|+.+|++.|+|+...-.. ...+++..+.+.||+|.
T Consensus 435 L~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 435 LRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred HhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 999999998 777 7889999999999999999764333 33478899999999974
No 410
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=6.3e-27 Score=230.37 Aligned_cols=210 Identities=33% Similarity=0.531 Sum_probs=175.5
Q ss_pred cccccceEEEEEEeCC-CcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCC
Q 004218 463 IGSGSFGSVYKGYLRE-GISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGN 540 (767)
Q Consensus 463 lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 540 (767)
||+|++|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++.. ....++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-----ENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-----CCeEEEEEecCCC
Confidence 6899999999999765 899999998754332 35678999999999999999999999543 3567999999999
Q ss_pred CChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC-CCceEEccccchhhhhhhc
Q 004218 541 GSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE-DMTAKVGDFGLARSLLERI 619 (767)
Q Consensus 541 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~a~~~~~~~ 619 (767)
++|.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999997642 2389999999999999999999999 9999999999999999 8999999999997653321
Q ss_pred CCCccccccccccCCCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhcc
Q 004218 620 GNQSSISSTHVLKGSIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLD 698 (767)
Q Consensus 620 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (767)
. ......+...|++||..... ..+.++|+|++|++++++
T Consensus 148 ~------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 148 S------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred c------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 1 12234477889999998877 788999999999999999
Q ss_pred HHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 699 RELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 699 ~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
. .+.+++..|++.+|++||++.++++.
T Consensus 188 ~----------------------~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 P----------------------ELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred H----------------------HHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 0 01126668999999999999999875
No 411
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=2.2e-26 Score=228.97 Aligned_cols=199 Identities=37% Similarity=0.498 Sum_probs=169.5
Q ss_pred CCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCc-chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTG-TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
|++.+.||.|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.++.++|+|++++++++. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 5677899999999999999875 889999999765544 5678899999999999999999999854 33567999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
+||+++++|.+++...... +++..+..++.+++.++.+||+. +++|+|++|.||+++.++.++|+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 9999999999999764321 78899999999999999999999 999999999999999999999999999976
Q ss_pred hhhhcCCCccccccccccCCCCccCcccc-CCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYG-LGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
...... .......++..|++||.. ....++.++|||++|+++++|++|+.||..
T Consensus 148 ~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDLA-----ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCccc-----ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 643320 012334577889999998 666778899999999999999999999955
No 412
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.93 E-value=7.6e-29 Score=266.22 Aligned_cols=354 Identities=26% Similarity=0.361 Sum_probs=219.0
Q ss_pred ccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeec
Q 004218 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIG 83 (767)
Q Consensus 4 L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (767)
+..|++++|-+. ..|-++.++-.+|+.|++++|.+. ..|..+..+.+|+.|+++.|.|. ..|....++.+|++|+|.
T Consensus 23 ~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~ 99 (1081)
T KOG0618|consen 23 LQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLK 99 (1081)
T ss_pred HHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheec
Confidence 567888888887 777776666667999999999999 78989999999999999999998 788899999999999999
Q ss_pred CccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCC-------------------cccc
Q 004218 84 FNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGN-------------------RFYG 144 (767)
Q Consensus 84 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n-------------------~i~~ 144 (767)
.|.+. ..|.++..+.+|++|+++.|++. .+|..+..++. ++++..++| .+.+
T Consensus 100 ~n~l~-------~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~-~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~ 170 (1081)
T KOG0618|consen 100 NNRLQ-------SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTA-EEELAASNNEKIQRLGQTSIKKLDLRLNVLGG 170 (1081)
T ss_pred cchhh-------cCchhHHhhhcccccccchhccC-CCchhHHhhhH-HHHHhhhcchhhhhhccccchhhhhhhhhccc
Confidence 99987 55777899999999999999998 78887777765 555555555 3333
Q ss_pred cCCccccCCCCCCEEECcCCcCcccCccccCCCC--------------------CCCEEEccCCccccccCcCcccCCCC
Q 004218 145 KIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQ--------------------ELQSLDLAGNQISGSIPNTLGNLKKL 204 (767)
Q Consensus 145 ~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~--------------------~L~~L~L~~n~i~~~~~~~~~~l~~L 204 (767)
.++..+..++. .|+|++|.+... .+..+. +|+.|+.++|.+....+ .+ .-.+|
T Consensus 171 ~~~~~i~~l~~--~ldLr~N~~~~~---dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~-~p-~p~nl 243 (1081)
T KOG0618|consen 171 SFLIDIYNLTH--QLDLRYNEMEVL---DLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDV-HP-VPLNL 243 (1081)
T ss_pred chhcchhhhhe--eeecccchhhhh---hhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeecc-cc-ccccc
Confidence 33333433333 477777766621 122222 23333334443331111 11 11456
Q ss_pred ceeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccC
Q 004218 205 NQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSA 284 (767)
Q Consensus 205 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 284 (767)
+++++++|+++. .|++++.+.+|+.|+..+|++. .+|..+...++|..+ ....|.+. .+|....+++.|+.|+|..
T Consensus 244 ~~~dis~n~l~~-lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l-~~~~nel~-yip~~le~~~sL~tLdL~~ 319 (1081)
T KOG0618|consen 244 QYLDISHNNLSN-LPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSL-SAAYNELE-YIPPFLEGLKSLRTLDLQS 319 (1081)
T ss_pred eeeecchhhhhc-chHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHH-Hhhhhhhh-hCCCcccccceeeeeeehh
Confidence 777777777763 4567777777777777777775 566666666666333 56666665 4455555566666666666
Q ss_pred CCCCCCCCccc-------------------------ccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCC
Q 004218 285 NGLSGNLPNSF-------------------------KNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSI 339 (767)
Q Consensus 285 n~l~~~~~~~~-------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 339 (767)
|+|....+..+ ..++.|+.|++.+|.+++.....+.++++|+.|+|++|++....
T Consensus 320 N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fp 399 (1081)
T KOG0618|consen 320 NNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFP 399 (1081)
T ss_pred ccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCC
Confidence 65542221111 11223445555555555444444555555555555555554333
Q ss_pred CccccccccCceEeccCCcCcCcCCCCccccccccccccCC
Q 004218 340 PSDLQNLRALRSLNLTFNNLEGVVPREGIFRHTSMVHLEGN 380 (767)
Q Consensus 340 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~l~~N 380 (767)
...+.++..|+.|+||||+|+..+.....++.+.++...+|
T Consensus 400 as~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN 440 (1081)
T KOG0618|consen 400 ASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSN 440 (1081)
T ss_pred HHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCC
Confidence 33344555555555555555544433333333333433333
No 413
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=3.1e-24 Score=258.74 Aligned_cols=322 Identities=23% Similarity=0.279 Sum_probs=134.5
Q ss_pred CCccccCCCCCcEEEccCCc------ccccCCccccCCC-CCCEEEcccccCcccCCccCCCCCCCcEEeecCccccCCC
Q 004218 19 PYDVGDKLPNLLGFNFCFNK------FTGKIPGSLHNLT-NIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSG 91 (767)
Q Consensus 19 p~~~~~~l~~L~~L~l~~n~------l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 91 (767)
....|.++++|+.|.+..+. +...+|+.|..++ +|+.|++.++.+. .+|..+ ...+|+.|+|++|++.
T Consensus 550 ~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~--- 624 (1153)
T PLN03210 550 HENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE--- 624 (1153)
T ss_pred cHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc---
Confidence 33344445555555443332 1122344344332 3555555555444 444433 2344555555555443
Q ss_pred CCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCc
Q 004218 92 DEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEIL 171 (767)
Q Consensus 92 ~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 171 (767)
.++..+..+++|+.|+|++|.....+|. ++.+++ |++|+|++|.....+|..+.++++|+.|++++|..-+.+|
T Consensus 625 ----~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~-Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 625 ----KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATN-LETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred ----ccccccccCCCCCEEECCCCCCcCcCCc-cccCCc-ccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccC
Confidence 2223334444555555554433223332 344444 5555555444333444445555555555555443222333
Q ss_pred cccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccC-------CCCCh
Q 004218 172 TEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLN-------GNIPK 244 (767)
Q Consensus 172 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~-------~~~~~ 244 (767)
..+ ++++|+.|++++|.....+|.. .++|+.|+|++|.+. ..|..+ .+++|+.|++.++... ...+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchh
Confidence 322 4445555555554333233321 234445555555543 233322 3444444444432211 00011
Q ss_pred hhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCC
Q 004218 245 EILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKG 324 (767)
Q Consensus 245 ~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 324 (767)
.+...++| +.|++++|.....+|..++++++|+.|+|++|...+.+|..+ .+++|+.|++++|.....+|.. ..+
T Consensus 773 ~~~~~~sL-~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 773 MTMLSPSL-TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhhccccc-hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 11111222 222444444444444445555555555555443222333333 3445555555554332233321 134
Q ss_pred ceEEEcCCcccCCCCCccccccccCceEeccC-CcCcCcC
Q 004218 325 LEVLDLSSNKLSGSIPSDLQNLRALRSLNLTF-NNLEGVV 363 (767)
Q Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~ 363 (767)
|+.|+|++|.+. .+|..+..+++|+.|++++ |++++++
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~ 886 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVS 886 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccC
Confidence 455555555554 3444444555555555544 3344333
No 414
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=6.3e-24 Score=256.10 Aligned_cols=335 Identities=21% Similarity=0.260 Sum_probs=269.2
Q ss_pred CCCccEEeCCCCe------eeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCC
Q 004218 1 MTSLVYLGLASNQ------LWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNL 74 (767)
Q Consensus 1 l~~L~~L~l~~n~------l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l 74 (767)
|++|+.|.+..+. +...+|..+..-..+|+.|++.++.+. .+|..| ...+|+.|+|++|.+. .++..+..+
T Consensus 557 m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l 633 (1153)
T PLN03210 557 MRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSL 633 (1153)
T ss_pred CccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccC
Confidence 5778888886653 333577765542346999999999998 788877 5799999999999998 788889999
Q ss_pred CCCcEEeecCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCC
Q 004218 75 PFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLR 154 (767)
Q Consensus 75 ~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~ 154 (767)
++|+.|+|++|... ...+.+..+++|++|+|++|.....+|..+..+.+ |+.|++++|.....+|..+ +++
T Consensus 634 ~~Lk~L~Ls~~~~l-------~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~-L~~L~L~~c~~L~~Lp~~i-~l~ 704 (1153)
T PLN03210 634 TGLRNIDLRGSKNL-------KEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNK-LEDLDMSRCENLEILPTGI-NLK 704 (1153)
T ss_pred CCCCEEECCCCCCc-------CcCCccccCCcccEEEecCCCCccccchhhhccCC-CCEEeCCCCCCcCccCCcC-CCC
Confidence 99999999987532 22235788999999999999877799999999998 9999999986555777765 789
Q ss_pred CCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCC-------CCCcccccCccc
Q 004218 155 SLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELA-------SEIPTSFGNFQN 227 (767)
Q Consensus 155 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-------~~~~~~~~~l~~ 227 (767)
+|+.|++++|......|.. ..+|++|+|++|.+. .+|..+ .+++|++|++.++... ...+..+...++
T Consensus 705 sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~s 779 (1153)
T PLN03210 705 SLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPS 779 (1153)
T ss_pred CCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhcccc
Confidence 9999999999765455532 468999999999998 667655 5789999999875432 112223334579
Q ss_pred cccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeecc
Q 004218 228 LLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMA 307 (767)
Q Consensus 228 L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~ 307 (767)
|+.|+|++|...+.+|..+.++++|.. |++++|...+.+|..+ .+++|+.|++++|......|.. .++|+.|+|+
T Consensus 780 L~~L~Ls~n~~l~~lP~si~~L~~L~~-L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls 854 (1153)
T PLN03210 780 LTRLFLSDIPSLVELPSSIQNLHKLEH-LEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLS 854 (1153)
T ss_pred chheeCCCCCCccccChhhhCCCCCCE-EECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECC
Confidence 999999999888889999999999954 4999986655777766 7899999999998655455543 3689999999
Q ss_pred CccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCc
Q 004218 308 NNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNN 358 (767)
Q Consensus 308 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 358 (767)
+|.++ .+|..+..+++|+.|+|++|.-...+|..+..+++|+.+++++|.
T Consensus 855 ~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 855 RTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 99998 688899999999999999965444688888999999999999885
No 415
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=9.2e-25 Score=207.98 Aligned_cols=172 Identities=21% Similarity=0.182 Sum_probs=124.1
Q ss_pred CChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcC
Q 004218 541 GSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIG 620 (767)
Q Consensus 541 gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 620 (767)
|||.+++.... ..+++.+++.|+.|++.||+|||++ + ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~-- 62 (176)
T smart00750 1 VSLADILEVRG-----RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPE-- 62 (176)
T ss_pred CcHHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccc--
Confidence 68999997532 3499999999999999999999998 5 999999999999999 9998754321
Q ss_pred CCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHH
Q 004218 621 NQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRE 700 (767)
Q Consensus 621 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 700 (767)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..................+.....
T Consensus 63 ---------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----- 128 (176)
T smart00750 63 ---------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD----- 128 (176)
T ss_pred ---------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc-----
Confidence 124789999999999999999999999999999999999998653221111111111111000000
Q ss_pred HHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHHHHH
Q 004218 701 LRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNAQKI 754 (767)
Q Consensus 701 l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~~~~ 754 (767)
........+ . ..+.+++.+||+.||++|||+.|+++++......
T Consensus 129 --------~~~~~~~~~-~-~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 129 --------RSNLESVSA-A-RSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred --------cccHHHHHh-h-hhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 000000111 0 0233477799999999999999999999776543
No 416
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=2.8e-25 Score=260.19 Aligned_cols=206 Identities=19% Similarity=0.228 Sum_probs=136.9
Q ss_pred cCCC-CCceeEEeeeecCC--cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 004218 507 NTRH-RNLVKLITSCSSLD--FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCE 583 (767)
Q Consensus 507 ~l~h-~niv~~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 583 (767)
.++| +||+++++++.... ...+..++.++||+ +++|.+++.... ..+++.+++.+++||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 3455 57888888753221 12234567888987 559999996432 3489999999999999999999999
Q ss_pred CCeEeecCCCCCeeeCCC-------------------CceEEccccchhhhhhhcC----------CCccccccccccCC
Q 004218 584 VPIVHCDLKPGNILLDED-------------------MTAKVGDFGLARSLLERIG----------NQSSISSTHVLKGS 634 (767)
Q Consensus 584 ~~ivH~Dlkp~NIl~~~~-------------------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~~~~~~gt 634 (767)
||+||||||+|||++.. +.+|++|||+++....... ............||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 99999999999999653 4556666666653211000 00000011124588
Q ss_pred CCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHH
Q 004218 635 IGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQ 714 (767)
Q Consensus 635 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 714 (767)
+.|+|||++.+..++.++|||||||++|||++|.+|+..... ..........+.. .
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~~~~~~--------~------------- 234 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHRVLPPQ--------I------------- 234 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHhhcChh--------h-------------
Confidence 999999999999999999999999999999999888643110 0000000000000 0
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 715 LHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 715 ~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
........ +++.+||+++|.+|||+.|++++
T Consensus 235 -~~~~~~~~-~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 235 -LLNWPKEA-SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred -hhcCHHHH-HHHHHhCCCChhhCcChHHHhhc
Confidence 00011111 25668999999999999999864
No 417
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=1.2e-23 Score=217.32 Aligned_cols=174 Identities=22% Similarity=0.174 Sum_probs=131.8
Q ss_pred HHHHHhcCCCCCCccccccceEEEEEEeC--CCcEEEEEEeecc-----CCcchhhHHHHHHHHhcCCCCCceeEEeeee
Q 004218 449 ELRRATGNFSHENLIGSGSFGSVYKGYLR--EGISVAVKVLDIE-----STGTWKSFFAECEALRNTRHRNLVKLITSCS 521 (767)
Q Consensus 449 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 521 (767)
..+...++|++.+.||+|+||.||+|.+. +++.||||+.... .....+.+.+|++++++++|+|+++.+..+
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 34556788999999999999999999865 4777899986432 112345688999999999999998533221
Q ss_pred cCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC-CCCCeeeCC
Q 004218 522 SLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL-KPGNILLDE 600 (767)
Q Consensus 522 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~NIl~~~ 600 (767)
+..++||||++|++|... . . .. ...++.|+++||+|||++ ||+|||| ||+||+++.
T Consensus 91 -------~~~~LVmE~~~G~~L~~~-~--~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~ 147 (365)
T PRK09188 91 -------GKDGLVRGWTEGVPLHLA-R--P-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGP 147 (365)
T ss_pred -------CCcEEEEEccCCCCHHHh-C--c-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcC
Confidence 235999999999999732 1 1 11 146789999999999999 9999999 999999999
Q ss_pred CCceEEccccchhhhhhhcCCCc--cccccccccCCCCccCccccCCC
Q 004218 601 DMTAKVGDFGLARSLLERIGNQS--SISSTHVLKGSIGYIPPEYGLGE 646 (767)
Q Consensus 601 ~~~~kl~Dfg~a~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~ 646 (767)
++.+||+|||+|+.+........ .........+++.|+|||.+...
T Consensus 148 ~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 148 DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999999987654321111 11122356688999999987643
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=3.1e-23 Score=231.29 Aligned_cols=61 Identities=25% Similarity=0.321 Sum_probs=29.2
Q ss_pred ceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCc
Q 004218 276 NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPS 341 (767)
Q Consensus 276 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 341 (767)
+|+.|++++|.+++ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++|++++..+.
T Consensus 403 ~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred CCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 44555555555553 3322 123444555555554 3444455555555555555555544443
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=2.3e-23 Score=232.39 Aligned_cols=265 Identities=23% Similarity=0.262 Sum_probs=211.6
Q ss_pred ccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeec
Q 004218 4 LVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIG 83 (767)
Q Consensus 4 L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 83 (767)
-..|||+.|+++ ++|..+. ++|+.|++.+|+++ .+|.. .++|++|+|++|+|+ .+|.. .++|+.|+++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeecc
Confidence 468999999998 9999875 37999999999999 57753 589999999999999 56653 3689999999
Q ss_pred CccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcC
Q 004218 84 FNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSY 163 (767)
Q Consensus 84 ~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~ 163 (767)
+|.+...+ . ..++|+.|++++|+++ .+|.. .++ |+.|++++|++++ +|... .+|+.|++++
T Consensus 271 ~N~L~~Lp-------~---lp~~L~~L~Ls~N~Lt-~LP~~---p~~-L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~ 331 (788)
T PRK15387 271 SNPLTHLP-------A---LPSGLCKLWIFGNQLT-SLPVL---PPG-LQELSVSDNQLAS-LPALP---SELCKLWAYN 331 (788)
T ss_pred CCchhhhh-------h---chhhcCEEECcCCccc-ccccc---ccc-cceeECCCCcccc-CCCCc---cccccccccc
Confidence 99987442 2 1257889999999999 56653 344 9999999999985 45433 4688999999
Q ss_pred CcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCC
Q 004218 164 NSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIP 243 (767)
Q Consensus 164 n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 243 (767)
|.+++ +|. ...+|++|+|++|+|+ .+|.. ..+|+.|++++|+|+. +|.. .++|+.|++++|+++ .+|
T Consensus 332 N~L~~-LP~---lp~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP 398 (788)
T PRK15387 332 NQLTS-LPT---LPSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLP 398 (788)
T ss_pred Ccccc-ccc---cccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CCC
Confidence 99984 443 1258999999999999 45653 2578899999999985 5543 367999999999999 466
Q ss_pred hhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhc
Q 004218 244 KEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAE 321 (767)
Q Consensus 244 ~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 321 (767)
... +++ ..|++++|+++. +|.. +.+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..
T Consensus 399 ~l~---s~L-~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 399 VLP---SEL-KELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred Ccc---cCC-CEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 543 334 445999999995 5543 357889999999999 67889999999999999999999877776644
No 420
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=2e-25 Score=218.08 Aligned_cols=270 Identities=19% Similarity=0.224 Sum_probs=210.2
Q ss_pred EEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeecC-
Q 004218 6 YLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGF- 84 (767)
Q Consensus 6 ~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~- 84 (767)
..|-++-+++ +||.++-. .-++++|..|+|+.+.|++|+++.+|++||||+|.|+...|.+|..+++|..|-+-+
T Consensus 50 ~VdCr~~GL~-eVP~~LP~---~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~ 125 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANLPP---ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGN 125 (498)
T ss_pred eEEccCCCcc-cCcccCCC---cceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcC
Confidence 3566677787 89988754 678899999999977788999999999999999999988899999999988877666
Q ss_pred ccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCC
Q 004218 85 NKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYN 164 (767)
Q Consensus 85 n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n 164 (767)
|+|+..+.+ .+.++.+|+.|.+.-|++.-...+.+.+++. |..|.+.+|.+..+--.+|..+..++.+.+..|
T Consensus 126 NkI~~l~k~------~F~gL~slqrLllNan~i~Cir~~al~dL~~-l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~n 198 (498)
T KOG4237|consen 126 NKITDLPKG------AFGGLSSLQRLLLNANHINCIRQDALRDLPS-LSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQN 198 (498)
T ss_pred Cchhhhhhh------HhhhHHHHHHHhcChhhhcchhHHHHHHhhh-cchhcccchhhhhhccccccchhccchHhhhcC
Confidence 889876654 4677888889999999998777888899988 999999999998555558999999999999988
Q ss_pred cCc------------ccCccccCCCCCCCEEEccCCc-------------------------cccccC-cCcccCCCCce
Q 004218 165 SIS------------GEILTEIGQLQELQSLDLAGNQ-------------------------ISGSIP-NTLGNLKKLNQ 206 (767)
Q Consensus 165 ~i~------------~~~~~~~~~l~~L~~L~L~~n~-------------------------i~~~~~-~~~~~l~~L~~ 206 (767)
.+- ...+..++...-..-..+.+++ .....| ..|..+++|+.
T Consensus 199 p~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 199 PFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred ccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceE
Confidence 722 1122233332222222222221 222223 34778889999
Q ss_pred eeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCC
Q 004218 207 IDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANG 286 (767)
Q Consensus 207 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~ 286 (767)
|+|++|+|+.+.+.+|.++..++.|.|..|++...-...|.++..|.. |+|.+|+|+-..|..|..+..|..|++-.|.
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~t-L~L~~N~it~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKT-LSLYDNQITTVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhcccccee-eeecCCeeEEEecccccccceeeeeehccCc
Confidence 999999999888889999999999999999988666677888888855 4899999988888888888888888887775
Q ss_pred C
Q 004218 287 L 287 (767)
Q Consensus 287 l 287 (767)
+
T Consensus 358 ~ 358 (498)
T KOG4237|consen 358 F 358 (498)
T ss_pred c
Confidence 4
No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=3.5e-22 Score=208.42 Aligned_cols=207 Identities=26% Similarity=0.338 Sum_probs=166.4
Q ss_pred CCCCCCccccccceEEEEEEeCCC--cEEEEEEeeccCCcchhhHHHHHHHHhcCC----CCCceeEEeeeecCCcccce
Q 004218 456 NFSHENLIGSGSFGSVYKGYLREG--ISVAVKVLDIESTGTWKSFFAECEALRNTR----HRNLVKLITSCSSLDFKNME 529 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~ 529 (767)
+|++.+.||+|+||.||.|...+. ..+|+|............+..|+.++..+. .+++..+++... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 899999999999999999997653 479999876553333337788999998886 368888888742 3455
Q ss_pred eeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-----Cce
Q 004218 530 FLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-----MTA 604 (767)
Q Consensus 530 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-----~~~ 604 (767)
+-++||+.+ |.+|.++..... ...++..++.+|+.|++.+|+++|+. |++||||||.|+.+... ..+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 669999988 779999886554 34599999999999999999999999 99999999999999854 469
Q ss_pred EEccccchh--hhhhhcCCC--ccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 605 KVGDFGLAR--SLLERIGNQ--SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 605 kl~Dfg~a~--~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
.|.|||+++ .+....... ..........||..|+++....+...+.+.|+||++.++.++..|..||...
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~ 240 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL 240 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence 999999998 433222211 1111124566999999999999999999999999999999999999999553
No 422
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.88 E-value=1.8e-24 Score=211.43 Aligned_cols=283 Identities=22% Similarity=0.245 Sum_probs=210.3
Q ss_pred CCcEEeecCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCC
Q 004218 76 FLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRS 155 (767)
Q Consensus 76 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~ 155 (767)
.-.+++|..|+|+.+|++ +++.+++|+.|||++|+|+.+-|++|..+...++-+..++|+|+....+.|.++.+
T Consensus 68 ~tveirLdqN~I~~iP~~------aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~s 141 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPG------AFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSS 141 (498)
T ss_pred cceEEEeccCCcccCChh------hccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHH
Confidence 345667777777765554 45667777777777777777777888887773344444457888766677888888
Q ss_pred CCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCc-CcccCCCCceeeCCCCcC------------CCCCcccc
Q 004218 156 LTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPN-TLGNLKKLNQIDLSGNEL------------ASEIPTSF 222 (767)
Q Consensus 156 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~~N~l------------~~~~~~~~ 222 (767)
|+.|.+.-|++..+..++|..+++|..|.+.+|.+. .++. .|..+.+++.+.+..|.+ ....|..+
T Consensus 142 lqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~iet 220 (498)
T KOG4237|consen 142 LQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIET 220 (498)
T ss_pred HHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhc
Confidence 888888888888777778888888888888888887 4444 777788888888887773 22344455
Q ss_pred cCccccccccccCcccCCCCChhhccc-ccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCccc
Q 004218 223 GNFQNLLSIDLSNNKLNGNIPKEILSL-SSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSL 301 (767)
Q Consensus 223 ~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L 301 (767)
+.+.-.....+.++++..+.+..|... .++...+....+.........|..+++|+.|+|++|+|+++-+.+|.++..|
T Consensus 221 sgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l 300 (498)
T KOG4237|consen 221 SGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAEL 300 (498)
T ss_pred ccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhh
Confidence 666666666777777765544444322 2332332233333333344579999999999999999999999999999999
Q ss_pred ceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcCCC
Q 004218 302 EKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVVPR 365 (767)
Q Consensus 302 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 365 (767)
++|+|..|+|.......|.++..|+.|+|.+|+|+..-|..|..+.+|.+|+|-.|++.+..--
T Consensus 301 ~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l 364 (498)
T KOG4237|consen 301 QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRL 364 (498)
T ss_pred hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccch
Confidence 9999999999987788899999999999999999999999999999999999999998765433
No 423
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=7.2e-23 Score=187.18 Aligned_cols=208 Identities=25% Similarity=0.346 Sum_probs=167.9
Q ss_pred HhcCCCCCCccccccceEEEEEE-eCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCC-CCceeEEeeeecCCccccee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNTRH-RNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 530 (767)
..+.|.++++||+|+||.+|.|. ..+|..||||+-+. .....++.-|.++.+.+++ ..|..+..+. .+..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~--~a~hpqL~yEskvY~iL~~g~GiP~i~~y~-----~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS--KAKHPQLLYESKVYRILQGGVGIPHIRHYG-----TEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecc--cCCCcchhHHHHHHHHhccCCCCchhhhhc-----ccccc
Confidence 35789999999999999999999 56699999998653 2334567789999998864 5566666553 34445
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC---CCCceEEc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD---EDMTAKVG 607 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~---~~~~~kl~ 607 (767)
-.+|||.. |.||.+++.-+.+ .++..+++-++-|++.-++|+|.+ +++||||||+|+++. ....+.++
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R-----~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSR-----RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhh-----hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEE
Confidence 58999998 7799999876643 399999999999999999999999 999999999999996 34579999
Q ss_pred cccchhhhhhhcCCC-ccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 608 DFGLARSLLERIGNQ-SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
|||+|+.+-+..... ..........||.+|++--...+...+.+.|+=|+|.++..+--|..||+...+
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka 226 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKA 226 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccch
Confidence 999999875543322 222233456799999998888877888999999999999999999999987644
No 424
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.9e-21 Score=186.28 Aligned_cols=207 Identities=21% Similarity=0.305 Sum_probs=171.2
Q ss_pred cCCCCCCccccccceEEEEEE-eCCCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCcccceeeE
Q 004218 455 GNFSHENLIGSGSFGSVYKGY-LREGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 455 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
-.|++.++||+|+||.++.|+ .-++++||||.-+..+ ...++..|.+..+.+ ..++|..++.+ -..+.+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeee-----ccccchhh
Confidence 479999999999999999999 4569999999765332 335677888888888 57888888766 34455568
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-----CceEEc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-----MTAKVG 607 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-----~~~kl~ 607 (767)
+|+|.. |.||+|++.-+. +.++..++..+|.|++.-++|+|++ .+|.|||||+|+||... ..+.|+
T Consensus 101 LVidLL-GPSLEDLFD~Cg-----R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCG-----RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhh-CcCHHHHHHHhc-----CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 999998 779999998765 3499999999999999999999999 99999999999999743 468999
Q ss_pred cccchhhhhhhcCCC-ccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCcccC
Q 004218 608 DFGLARSLLERIGNQ-SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG 677 (767)
Q Consensus 608 Dfg~a~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~ 677 (767)
|||+|+.+.+..... ..........||.+||+--...+...+.+.|+=|+|-++++.+-|..||+.....
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~ 242 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD 242 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc
Confidence 999999886654332 2222334567999999999999999999999999999999999999999875443
No 425
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3.1e-23 Score=192.59 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=182.6
Q ss_pred CCCCCccccccceEEEEEEeCCCcEEEEEEeecc--CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEE
Q 004218 457 FSHENLIGSGSFGSVYKGYLREGISVAVKVLDIE--STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.....+|.+...|..|+|+|. |..+++|++... .....++|..|.-.++-+.||||+++++.|.++ ....++
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~i 265 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVII 265 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEe
Confidence 334557888999999999998 667888887543 233456788999999999999999999998653 445899
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc--cccch
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG--DFGLA 612 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~a 612 (767)
..||+.|+|+..++... +...+..++.+++.++|+|++|||+. ++-|-.--+.+..|++|++..++|+ |--++
T Consensus 266 sq~mp~gslynvlhe~t----~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfs 340 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQT----SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFS 340 (448)
T ss_pred eeeccchHHHHHHhcCc----cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceee
Confidence 99999999999998754 34577889999999999999999997 4344445689999999999887763 33222
Q ss_pred hhhhhhcCCCccccccccccCCCCccCccccCCCCC---CCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 613 RSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKP---STAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
... ....-.+.||+||.+...+. -.++|+|||++++||+.|...||.+..+-+..+.-..++ .
T Consensus 341 fqe-------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeg-l 406 (448)
T KOG0195|consen 341 FQE-------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG-L 406 (448)
T ss_pred eec-------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc-c
Confidence 110 11224678999999887654 357999999999999999999998765544333222221 1
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLKNA 751 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~~~ 751 (767)
...++.-+.+. +.+++.-|++.||.+||.++.++-.|++.
T Consensus 407 rv~ippgis~h----------------------m~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 407 RVHIPPGISRH----------------------MNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cccCCCCccHH----------------------HHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 11111111111 11255579999999999999999988875
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=9.7e-23 Score=225.07 Aligned_cols=256 Identities=23% Similarity=0.254 Sum_probs=180.2
Q ss_pred CCCCccccccceEEEEEEeCC-CcEEEEEEeec-----cCCcc-hhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 458 SHENLIGSGSFGSVYKGYLRE-GISVAVKVLDI-----ESTGT-WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 458 ~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~-----~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
...+.+|.|++|.|+.+.... ....+.|.+.. ..... ...+..|.-+-..+.|||++..+..+.... ..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~----~~ 396 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID----GI 396 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc----cc
Confidence 345789999999888877442 33344443321 11111 122556777777889999988777653321 22
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
.-+||||++ +|..++.... .+...++..+++|++.|++|+|+. ||.|||+|++|++++.+|.+||+|||
T Consensus 397 -~~~mE~~~~-Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 397 -LQSMEYCPY-DLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred -hhhhhcccH-HHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecC
Confidence 333999999 9999997652 288899999999999999999999 99999999999999999999999999
Q ss_pred chhhhhhhcCCCccccccccccCCCCccCccccCCCCCCC-cccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhc
Q 004218 611 LARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPST-AGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNF 689 (767)
Q Consensus 611 ~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 689 (767)
.+......... ........+|+..|+|||++.+..|.+ ..||||.|+++..|.+|+.||......+...... .+
T Consensus 466 ~~~vf~~~~e~--~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~---~~ 540 (601)
T KOG0590|consen 466 AASVFRYPWEK--NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN---NY 540 (601)
T ss_pred cceeeccCcch--hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh---cc
Confidence 99765443222 123345678999999999999999865 5899999999999999999997654443332100 00
Q ss_pred ccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 690 PKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 690 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
..+.. . ......+...+....+.++.+|++.||.+|.|+++|++
T Consensus 541 ~~~~~--~-----------~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 541 SDQRN--I-----------FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccc--c-----------ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00000 0 00111122223333334788999999999999999986
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-22 Score=222.53 Aligned_cols=252 Identities=22% Similarity=0.251 Sum_probs=176.6
Q ss_pred CCCCCCccccccceEEEEEEeCCCcEEEEEEeeccC-Ccc---hhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIES-TGT---WKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 531 (767)
+|...+.||++.|=.|.+|++++|. |+||++-+.. .-. .++-..|++ ...++|||++++.-+ ...+...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~-----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKV-----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHH-----HHhhHHH
Confidence 6778899999999999999999886 9999985443 223 333444555 556699999998776 4455666
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGL 611 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 611 (767)
|+|-+|+.. +|+|.+..+.- +...+.+.|+.|++.|+..+|+. ||+|||||.+||||++-.-+.|+||..
T Consensus 97 ylvRqyvkh-nLyDRlSTRPF------L~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 97 YLVRQYVKH-NLYDRLSTRPF------LVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHhh-hhhhhhccchH------HHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 889999966 99999987553 88889999999999999999999 999999999999999999999999977
Q ss_pred hhhh--hhhcCCCccccccccccCCCCccCccccCCC----------C-CCCcccchhhhHHHHHHHh-CCCCCCCcccC
Q 004218 612 ARSL--LERIGNQSSISSTHVLKGSIGYIPPEYGLGE----------K-PSTAGDVYSFGVMLLEIFT-GMSPTHESFAG 677 (767)
Q Consensus 612 a~~~--~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 677 (767)
-+.. .++.+.... ....+...-..|.|||.+... . .+++.||||+||+++|+++ |++||.-.
T Consensus 167 FKPtYLPeDNPadf~-fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS--- 242 (1431)
T KOG1240|consen 167 FKPTYLPEDNPADFT-FFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS--- 242 (1431)
T ss_pred cCCccCCCCCcccce-EEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH---
Confidence 6432 222111111 111222233469999976431 2 5778999999999999998 57777431
Q ss_pred CcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 678 EVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
++..+.... .... +.+-+.+. ..-++.++..|++.||++|.+|++.++.-.
T Consensus 243 --QL~aYr~~~-~~~~-----e~~Le~Ie-------------d~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 243 --QLLAYRSGN-ADDP-----EQLLEKIE-------------DVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred --HHHhHhccC-ccCH-----HHHHHhCc-------------CccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 122221111 0000 00001110 011233777899999999999999998743
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1.1e-21 Score=220.56 Aligned_cols=246 Identities=23% Similarity=0.373 Sum_probs=126.0
Q ss_pred CccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEee
Q 004218 3 SLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNI 82 (767)
Q Consensus 3 ~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 82 (767)
+..+|+|++++++ .+|..+. ++|+.|+|++|+++ .+|..+. ++|++|++++|.++ .+|..+. .+|+.|+|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP---EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc---cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 3456667766666 6666543 35666677776666 4554443 46666666666666 4454432 35666666
Q ss_pred cCccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECc
Q 004218 83 GFNKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLS 162 (767)
Q Consensus 83 ~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~ 162 (767)
++|++...| ..+. ++|+.|++++|+++ .+|..+. .. |+.|++++|+++ .+|..+. ++|+.|+++
T Consensus 249 s~N~L~~LP-------~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~s-L~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 249 SINRITELP-------ERLP--SALQSLDLFHNKIS-CLPENLP--EE-LRYLSVYDNSIR-TLPAHLP--SGITHLNVQ 312 (754)
T ss_pred cCCccCcCC-------hhHh--CCCCEEECcCCccC-ccccccC--CC-CcEEECCCCccc-cCcccch--hhHHHHHhc
Confidence 666655332 1121 34556666666655 3444332 12 555666655555 2333322 345555555
Q ss_pred CCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCC
Q 004218 163 YNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNI 242 (767)
Q Consensus 163 ~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 242 (767)
+|.++. +|..+ .++|+.|++++|.++ .+|..+. ++|+.|+|++|+++. +|..+ .++|+.|++++|+++ .+
T Consensus 313 ~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~~-LP~~l--p~~L~~LdLs~N~Lt-~L 382 (754)
T PRK15370 313 SNSLTA-LPETL--PPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQITV-LPETL--PPTITTLDVSRNALT-NL 382 (754)
T ss_pred CCcccc-CCccc--cccceeccccCCccc-cCChhhc--CcccEEECCCCCCCc-CChhh--cCCcCEEECCCCcCC-CC
Confidence 555552 23222 134555555555555 2343332 455555555555542 33332 134555555555554 23
Q ss_pred ChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcc----cccCcccceeeccCcccc
Q 004218 243 PKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNS----FKNCKSLEKLLMANNKFS 312 (767)
Q Consensus 243 ~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~----~~~l~~L~~L~l~~n~l~ 312 (767)
|. .+. ..|+.|++++|+++ .+|.. +..++++..|++.+|++.
T Consensus 383 P~-------------------------~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 383 PE-------------------------NLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CH-------------------------hHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 32 221 24566666666665 33332 233466667777777765
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.86 E-value=7.3e-22 Score=188.94 Aligned_cols=177 Identities=14% Similarity=0.116 Sum_probs=135.8
Q ss_pred HHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhh---------HHHHHHHHhcCCCCCceeEEeeeec
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKS---------FFAECEALRNTRHRNLVKLITSCSS 522 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~niv~~~~~~~~ 522 (767)
...++|++.+++|.|+||.||++.. ++..+|+|++........+. +.+|++.+.++.||+|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3478999999999999999999766 57789999996543333222 5789999999999999999888543
Q ss_pred CC---cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC
Q 004218 523 LD---FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLD 599 (767)
Q Consensus 523 ~~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~ 599 (767)
.. +...+..++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||+||+||+++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 22 122356799999999999988732 332 2456999999999999 999999999999999
Q ss_pred CCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHH
Q 004218 600 EDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIF 665 (767)
Q Consensus 600 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 665 (767)
.+| ++|+|||.+........ ...+.....+..++|+||||+++....
T Consensus 170 ~~g-i~liDfg~~~~~~e~~a------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRKA------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchhh------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 988 99999998865422110 011334455677899999999877654
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=2.7e-20 Score=198.23 Aligned_cols=264 Identities=30% Similarity=0.407 Sum_probs=190.7
Q ss_pred CCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCc---chhhHHHHHHHHhcCCCC-CceeEEeeeecCCcccceeeE
Q 004218 457 FSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTG---TWKSFFAECEALRNTRHR-NLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~~ 532 (767)
|.+.+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+.+. .....+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~ 74 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSLY 74 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEEE
Confidence 677889999999999999987 78999998654332 367889999999999988 7999999862 333479
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC-ceEEccccc
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM-TAKVGDFGL 611 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~-~~kl~Dfg~ 611 (767)
++++++.++++.+++...... ..++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 75 LVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred EEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 999999999999777654311 2488999999999999999999999 999999999999999988 799999999
Q ss_pred hhhhhhhcCCCccccccccccCCCCccCccccCC---CCCCCcccchhhhHHHHHHHhCCCCCCCcccC--CcchhhHhh
Q 004218 612 ARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG---EKPSTAGDVYSFGVMLLEIFTGMSPTHESFAG--EVSLVKWVE 686 (767)
Q Consensus 612 a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~ 686 (767)
++...................|+..|+|||.+.+ ..++...|+||+|++++++++|..||...... .......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 9754332211110012355679999999999887 57889999999999999999999996554321 111111111
Q ss_pred hhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 004218 687 SNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALRR 747 (767)
Q Consensus 687 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~ 747 (767)
................ ......+.+++..|+..+|..|.++.+....
T Consensus 229 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ELPTPSLASPLSPSNP--------------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hcCCcccccccCcccc--------------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111000000000000 0011122236667888899999999988775
No 431
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=3.1e-21 Score=217.02 Aligned_cols=222 Identities=23% Similarity=0.434 Sum_probs=128.4
Q ss_pred CCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEc
Q 004218 106 RLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDL 185 (767)
Q Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L 185 (767)
+|++|++++|+++ .+|..+.. +|+.|+|++|++. .+|..+. .+|+.|++++|+++ .+|..+. ++|+.|++
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~~---~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~L 290 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLPD---TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSV 290 (754)
T ss_pred CCCEEECCCCccc-cCChhhhc---cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEEC
Confidence 4445555555544 33433321 2555555555555 3344332 34555555555555 2343332 35666666
Q ss_pred cCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcccccccceeecccccCCC
Q 004218 186 AGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDG 265 (767)
Q Consensus 186 ~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~ 265 (767)
++|+++ .+|..+. ++|+.|++++|+++. +|..+ .++|+.|++++|.++ .+|..+. ++| +.|++++|+++
T Consensus 291 s~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l~--~sL-~~L~Ls~N~L~- 359 (754)
T PRK15370 291 YDNSIR-TLPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALT-SLPASLP--PEL-QVLDVSKNQIT- 359 (754)
T ss_pred CCCccc-cCcccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCccc-cCChhhc--Ccc-cEEECCCCCCC-
Confidence 666655 3343332 356666666666653 33322 245666666666666 3444332 333 34467777666
Q ss_pred CCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhh----ccCCceEEEcCCcccCCCCCc
Q 004218 266 TLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILA----ELKGLEVLDLSSNKLSGSIPS 341 (767)
Q Consensus 266 ~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l~~L~~L~Ls~N~l~~~~~~ 341 (767)
.+|..+ .++|+.|+|++|.|+. +|..+. ..|+.|++++|+++ .+|..+. .++++..|++.+|+++.
T Consensus 360 ~LP~~l--p~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~---- 429 (754)
T PRK15370 360 VLPETL--PPTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE---- 429 (754)
T ss_pred cCChhh--cCCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH----
Confidence 345444 3589999999999995 555554 47999999999998 5555443 45889999999999972
Q ss_pred cccccccCceEeccCCcCcC
Q 004218 342 DLQNLRALRSLNLTFNNLEG 361 (767)
Q Consensus 342 ~~~~l~~L~~L~l~~N~l~~ 361 (767)
..+++|+.| ++.+.+.|
T Consensus 430 --~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 430 --RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred --HHHHHHHHh-hhcccccC
Confidence 345555555 44555554
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=5.8e-21 Score=181.79 Aligned_cols=139 Identities=18% Similarity=0.145 Sum_probs=106.7
Q ss_pred CCccccccceEEEEEEeCCCcEEEEEEeeccCCc--c-------hhh-----------------HHHHHHHHhcCCCCCc
Q 004218 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTG--T-------WKS-----------------FFAECEALRNTRHRNL 513 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~e~~~l~~l~h~ni 513 (767)
...||+|+||.||+|...+|+.||||+++..... . ... ..+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999888999999999654221 1 112 2349999999987776
Q ss_pred eeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCCeEeecCC
Q 004218 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYL-HNDCEVPIVHCDLK 592 (767)
Q Consensus 514 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~Dlk 592 (767)
.....+.. . ..++||||++++++....... .+++..++..++.|++.+|.|+ |+. ||+|||||
T Consensus 82 ~~p~~~~~----~---~~~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlk 145 (190)
T cd05147 82 PCPEPILL----K---SHVLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQDC---RLVHADLS 145 (190)
T ss_pred CCCcEEEe----c---CCEEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 43332211 1 127999999988776543222 2388999999999999999999 688 99999999
Q ss_pred CCCeeeCCCCceEEccccchhhh
Q 004218 593 PGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 593 p~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
|+||+++ ++.++|+|||+|...
T Consensus 146 P~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 146 EYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHEEEE-CCcEEEEEccccccC
Confidence 9999998 478999999999753
No 433
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.1e-20 Score=185.01 Aligned_cols=207 Identities=21% Similarity=0.240 Sum_probs=142.5
Q ss_pred CCCCceeEEeeeecC----------------------CcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHH
Q 004218 509 RHRNLVKLITSCSSL----------------------DFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLN 566 (767)
Q Consensus 509 ~h~niv~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~ 566 (767)
+|||||++.+++.+. ....+..+|+||..++. +|.+++.... .+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-------CchHHHHH
Confidence 599999999876431 12234578999999976 9999998654 67778888
Q ss_pred HHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeC--CCC--ceEEccccchhhhhhhcCCCccccccccccCCCCccCccc
Q 004218 567 IAIDIASALDYLHNDCEVPIVHCDLKPGNILLD--EDM--TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEY 642 (767)
Q Consensus 567 i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~--~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 642 (767)
++.|+++|+.|||++ ||.|||+|++||++. +++ ...++|||.+--.....-.-...+..-...|.-..||||+
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi 422 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEI 422 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhh
Confidence 999999999999999 999999999999994 444 4688999998432211001111111123447778999998
Q ss_pred cCCCC------CCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHH
Q 004218 643 GLGEK------PSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLH 716 (767)
Q Consensus 643 ~~~~~------~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 716 (767)
....+ .-.++|.|+.|.+.||+++..-||...-+.......+-+.+.|. .++.+.+.
T Consensus 423 ~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPa-lp~~vpp~---------------- 485 (598)
T KOG4158|consen 423 ATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPA-LPSRVPPV---------------- 485 (598)
T ss_pred hhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCC-CcccCChH----------------
Confidence 76432 13589999999999999999999976322222222222222222 22222322
Q ss_pred HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHH
Q 004218 717 DCLITIIESVGLSCTTESPGGRIDIREALRRLK 749 (767)
Q Consensus 717 ~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~~L~ 749 (767)
+++++...++.||++|+++.-+...+.
T Consensus 486 ------~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 486 ------ARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred ------HHHHHHHHhcCCccccCCccHHHhHHH
Confidence 333666688899999999877766654
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=3.4e-20 Score=173.05 Aligned_cols=192 Identities=18% Similarity=0.053 Sum_probs=139.3
Q ss_pred CCCCCccccccceEEEEEEeCCCcEEEEEEeeccCC----cchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccceee
Q 004218 457 FSHENLIGSGSFGSVYKGYLREGISVAVKVLDIEST----GTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEFL 531 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 531 (767)
+.+...|++|+||+||.+.. .+.+++.+.+..... -....+.+|+++|+++. |+++++++++. ..
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~ 73 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GR 73 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CE
Confidence 34678899999999997766 588888877753322 11235789999999995 58899998861 23
Q ss_pred EEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecC-CCCCeeeCCCCceEEcccc
Q 004218 532 ALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDL-KPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 532 ~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl-kp~NIl~~~~~~~kl~Dfg 610 (767)
+++|||++|.+|.+.... ....++.|++.+++++|++ ||+|||| ||+||+++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 899999999998754321 1134778999999999999 9999999 7999999999999999999
Q ss_pred chhhhhhhcCC-------CccccccccccCCCCccCccccCC--CCCCCcccchhhhHHHHHHHhCCCCCCCc
Q 004218 611 LARSLLERIGN-------QSSISSTHVLKGSIGYIPPEYGLG--EKPSTAGDVYSFGVMLLEIFTGMSPTHES 674 (767)
Q Consensus 611 ~a~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~ 674 (767)
+|......... +...-.......++.|++|+...- ..--.+.+.++-|+-+|.++|++.|+...
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 99854332110 000000112235777888875322 22235679999999999999999986544
No 435
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=7e-20 Score=175.50 Aligned_cols=138 Identities=21% Similarity=0.185 Sum_probs=108.6
Q ss_pred CCccccccceEEEEEEeCCCcEEEEEEeeccCCcc--------------------------hhhHHHHHHHHhcCCCCCc
Q 004218 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGT--------------------------WKSFFAECEALRNTRHRNL 513 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h~ni 513 (767)
...||+|++|.||+|...+|+.||||+++...... ...+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46899999999999998789999999987542110 1123578899999999887
Q ss_pred eeEEeeeecCCcccceeeEEEEeecCCCChhhh-hcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecC
Q 004218 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDW-IHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDL 591 (767)
Q Consensus 514 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dl 591 (767)
.....+... ..++||||++|+++... +.. ..++..++..++.|++.++.++|+ . ||+||||
T Consensus 82 ~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~-------~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDl 144 (190)
T cd05145 82 PVPEPILLK-------KNVLVMEFIGDDGSPAPRLKD-------VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDL 144 (190)
T ss_pred CCceEEEec-------CCEEEEEEecCCCchhhhhhh-------ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 544433211 12899999998865433 322 127788999999999999999999 8 9999999
Q ss_pred CCCCeeeCCCCceEEccccchhhh
Q 004218 592 KPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 592 kp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+||+++ ++.++|+|||++...
T Consensus 145 kP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 145 SEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred ChhhEEEE-CCCEEEEEcccceec
Confidence 99999998 789999999999754
No 436
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=2.6e-20 Score=183.83 Aligned_cols=207 Identities=24% Similarity=0.310 Sum_probs=131.4
Q ss_pred CCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCC---cchhhHHHHHHHHhcCC----------CCCceeEEeeee
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIEST---GTWKSFFAECEALRNTR----------HRNLVKLITSCS 521 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~----------h~niv~~~~~~~ 521 (767)
.+...+.||.|+++.||.+++.+ ++++|||++..... ..++++.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 44566789999999999999875 89999999854332 24556666654444432 112222222221
Q ss_pred cCC----c---ccce-----eeEEEEeecCCCChhhhhcccCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEe
Q 004218 522 SLD----F---KNME-----FLALVYEFLGNGSLGDWIHGERKNE-HGNGLNFLERLNIAIDIASALDYLHNDCEVPIVH 588 (767)
Q Consensus 522 ~~~----~---~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 588 (767)
... + .+.. ..+++|+-+. +||.+++..-.... ....+....+..+..|+++.+++||+. |+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 100 0 0011 2367888884 59988865321110 012244555677889999999999999 9999
Q ss_pred ecCCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCC--------CCCCCcccchhhhHH
Q 004218 589 CDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLG--------EKPSTAGDVYSFGVM 660 (767)
Q Consensus 589 ~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~i 660 (767)
+||+|+|++++.+|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~---------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC---------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG---------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeec---------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 999999999999999999999888765432111 224577999997543 246889999999999
Q ss_pred HHHHHhCCCCCCCcc
Q 004218 661 LLEIFTGMSPTHESF 675 (767)
Q Consensus 661 l~el~tg~~p~~~~~ 675 (767)
+|.+++|..||+...
T Consensus 240 ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSS 254 (288)
T ss_dssp HHHHHHSS-STCCCG
T ss_pred HHHHHHccCCCCCCC
Confidence 999999999997653
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=4.2e-21 Score=166.38 Aligned_cols=180 Identities=30% Similarity=0.531 Sum_probs=133.9
Q ss_pred cCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeE
Q 004218 200 NLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVT 279 (767)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~ 279 (767)
++.+++.|.||+|+++ ..|..++.+.+|+.|++++|++. .+|..+++++++ ++++++-|++. ..|..|+.++.|+.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~kl-r~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKL-RILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhh-hheecchhhhh-cCccccCCCchhhh
Confidence 3444555555555554 23334555555555555555555 455555555555 33355555555 77788888888888
Q ss_pred EEccCCCCCC-CCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCc
Q 004218 280 IDLSANGLSG-NLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNN 358 (767)
Q Consensus 280 L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 358 (767)
|||++|++.. .+|..|-.+..|+-|+|++|.+. .+|..++++.+|+.|.+..|.+. .+|..++.+..|++|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 9999988864 57888888999999999999998 88889999999999999999998 889999999999999999999
Q ss_pred CcCcCCCCccc---cccccccccCCcCccc
Q 004218 359 LEGVVPREGIF---RHTSMVHLEGNPKLCL 385 (767)
Q Consensus 359 l~~~~~~~~~~---~~~~~~~l~~Np~~c~ 385 (767)
++-.+|+.+.+ .+.....++.|||.-.
T Consensus 185 l~vlppel~~l~l~~~k~v~r~E~NPwv~p 214 (264)
T KOG0617|consen 185 LTVLPPELANLDLVGNKQVMRMEENPWVNP 214 (264)
T ss_pred eeecChhhhhhhhhhhHHHHhhhhCCCCCh
Confidence 99998887554 3345677889998653
No 438
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.1e-18 Score=167.16 Aligned_cols=140 Identities=18% Similarity=0.220 Sum_probs=107.0
Q ss_pred CCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcC-----CCCCceeEEeeeecCCccccee-
Q 004218 457 FSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT-----RHRNLVKLITSCSSLDFKNMEF- 530 (767)
Q Consensus 457 ~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~- 530 (767)
++-.+.||+|+||.||. +.+....+||++........+.+.+|+++++.+ .||||++++|++.... ..+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v 79 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYV 79 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEE
Confidence 34457899999999996 443333479998765455567899999999999 5799999999975421 1234
Q ss_pred eEEEEee--cCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCCeEeecCCCCCeeeCC----CCc
Q 004218 531 LALVYEF--LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASAL-DYLHNDCEVPIVHCDLKPGNILLDE----DMT 603 (767)
Q Consensus 531 ~~lv~e~--~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~Dlkp~NIl~~~----~~~ 603 (767)
+.+|+|| +++|+|.+++.... +++. ..++.|++.++ +|||++ +|+||||||+||+++. ++.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 4478999 55799999996532 5554 35678888777 999999 9999999999999973 348
Q ss_pred eEEccccch
Q 004218 604 AKVGDFGLA 612 (767)
Q Consensus 604 ~kl~Dfg~a 612 (767)
++|+||+.+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995444
No 439
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=4.4e-21 Score=166.30 Aligned_cols=161 Identities=27% Similarity=0.579 Sum_probs=103.5
Q ss_pred CCCCcEEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeecCccccCCCCCCccccccccCCC
Q 004218 26 LPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNST 105 (767)
Q Consensus 26 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~ 105 (767)
+.+++.|.|++|+++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|.+. ..+..++.++
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-------~lprgfgs~p 102 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-------ILPRGFGSFP 102 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-------cCccccCCCc
Confidence 555666666666666 45555666666666666666666 56666666666666666666554 2333445555
Q ss_pred CCCEEECcCCcce-eecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEE
Q 004218 106 RLNFLAFDGNQFE-GEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLD 184 (767)
Q Consensus 106 ~L~~L~l~~n~l~-~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 184 (767)
.|..|||..|++. ..+|..|+.+.. |+.|+|++|.+. .+|..++++++|+.|.+++|.+- .+|..++.+.+|++|.
T Consensus 103 ~levldltynnl~e~~lpgnff~m~t-lralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelh 179 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYMTT-LRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELH 179 (264)
T ss_pred hhhhhhccccccccccCCcchhHHHH-HHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHh
Confidence 5555555555543 246777777766 777777777776 66777777777777777777776 5667777777777777
Q ss_pred ccCCccccccCcCcc
Q 004218 185 LAGNQISGSIPNTLG 199 (767)
Q Consensus 185 L~~n~i~~~~~~~~~ 199 (767)
+.+|++. .+|..++
T Consensus 180 iqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 180 IQGNRLT-VLPPELA 193 (264)
T ss_pred cccceee-ecChhhh
Confidence 7777776 4554444
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.78 E-value=3.4e-21 Score=202.59 Aligned_cols=286 Identities=22% Similarity=0.289 Sum_probs=136.7
Q ss_pred EEEccCCccc-ccCCccccCCCCCCEEEcccccCcc----cCCccCCCCCCCcEEeecCccccCCCCCCccccccccCCC
Q 004218 31 GFNFCFNKFT-GKIPGSLHNLTNIQIIRMAHNLLEG----TVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNST 105 (767)
Q Consensus 31 ~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~ 105 (767)
.|+|..+.+. ...+..+..+.+|++|++++|.+++ .++..+...++|++|+++.+.+...+.....++..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666666 3344556666777777777777743 2344455556677777766655321111112233344455
Q ss_pred CCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcc----cCccccCCC-CCC
Q 004218 106 RLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISG----EILTEIGQL-QEL 180 (767)
Q Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~----~~~~~~~~l-~~L 180 (767)
+|+.|++++|.+....+..+..+... ++|++|++++|++.+ .....+..+ ++|
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~----------------------~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L 139 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRS----------------------SSLQELKLNNNGLGDRGLRLLAKGLKDLPPAL 139 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhcc----------------------CcccEEEeeCCccchHHHHHHHHHHHhCCCCc
Confidence 55555555555543333333332221 124444444444441 111223333 455
Q ss_pred CEEEccCCcccc----ccCcCcccCCCCceeeCCCCcCCCC----CcccccCccccccccccCcccCCCCChhhcccccc
Q 004218 181 QSLDLAGNQISG----SIPNTLGNLKKLNQIDLSGNELASE----IPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSL 252 (767)
Q Consensus 181 ~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l 252 (767)
++|++++|.+++ .++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+.+....
T Consensus 140 ~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~-------- 211 (319)
T cd00116 140 EKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS-------- 211 (319)
T ss_pred eEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH--------
Confidence 555555555442 1122334444555555555555421 112223334555555555554421111
Q ss_pred cceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccc-----cCcccceeeccCccccC----CCCchhhccC
Q 004218 253 TTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFK-----NCKSLEKLLMANNKFSG----PIPNILAELK 323 (767)
Q Consensus 253 ~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~----~~~~~~~~l~ 323 (767)
.++..+..+++|+.|++++|.+++.....+. ..+.|++|++++|.++. .+...+..++
T Consensus 212 -------------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~ 278 (319)
T cd00116 212 -------------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKE 278 (319)
T ss_pred -------------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCC
Confidence 1112234445666666666665532222221 12566666666666542 1223444556
Q ss_pred CceEEEcCCcccCCC----CCcccccc-ccCceEeccCCcC
Q 004218 324 GLEVLDLSSNKLSGS----IPSDLQNL-RALRSLNLTFNNL 359 (767)
Q Consensus 324 ~L~~L~Ls~N~l~~~----~~~~~~~l-~~L~~L~l~~N~l 359 (767)
+|+.+++++|.++.. ....+... +.|+++++.+|++
T Consensus 279 ~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 279 SLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 677777777777633 22233333 5666666666653
No 441
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=8.1e-19 Score=184.29 Aligned_cols=216 Identities=28% Similarity=0.410 Sum_probs=156.1
Q ss_pred HhcCCCCCceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 004218 505 LRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEV 584 (767)
Q Consensus 505 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 584 (767)
|+.+.|.|+.+++|.+... ...++|.+||..|+|.|.+.... ..+++.....++++++.|++|+|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcC---
Confidence 3567899999999997643 66799999999999999998743 3489999999999999999999997
Q ss_pred Ce-EeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCC-------CCCcccchh
Q 004218 585 PI-VHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEK-------PSTAGDVYS 656 (767)
Q Consensus 585 ~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~Dv~s 656 (767)
+| .|+.+++.|.+++....+||+|||+.....+..... ......-..-|.|||.+.... .+.+.||||
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~----~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs 143 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPE----AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYS 143 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhccccccccccc----ccchhHHHHhccCHHHhcccccccccccccccCCeeh
Confidence 44 999999999999999999999999987664311100 011122345699999887631 467899999
Q ss_pred hhHHHHHHHhCCCCCCCcccCCc--chhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCC
Q 004218 657 FGVMLLEIFTGMSPTHESFAGEV--SLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTES 734 (767)
Q Consensus 657 lG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 734 (767)
||++++|+++.+.||+....... .+...+.... .....+.+.... +..+ .++. ++..||..+
T Consensus 144 ~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~----~~~~rP~i~~~~--------e~~~---~l~~-l~~~cw~e~ 207 (484)
T KOG1023|consen 144 FGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGG----SNPFRPSIELLN--------ELPP---ELLL-LVARCWEEI 207 (484)
T ss_pred HHHHHHHHHhccCccccccccCChHHHHHHHHhcC----CCCcCcchhhhh--------hcch---HHHH-HHHHhcccC
Confidence 99999999999999987544332 2222222201 111111111100 1111 2222 677899999
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 004218 735 PGGRIDIREALRRLKNAQK 753 (767)
Q Consensus 735 P~~Rpt~~evl~~L~~~~~ 753 (767)
|.+||+++++-..++.+..
T Consensus 208 P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 208 PEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hhhCccHHHHHhhhhhhcc
Confidence 9999999999888876654
No 442
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1.2e-19 Score=189.75 Aligned_cols=186 Identities=30% Similarity=0.348 Sum_probs=153.8
Q ss_pred ccccccceEEEEEEe----CCCcEEEEEEeeccCCc--chhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccceeeEEE
Q 004218 462 LIGSGSFGSVYKGYL----REGISVAVKVLDIESTG--TWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~----~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
.+|+|.||.|+++.- ..|..+|+|+..+.... .......|-.++...+ ||.++++... +..+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 378999999998762 23778999987543221 1124446777788886 9999999887 5566778999
Q ss_pred EeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 535 YEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 535 ~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
++|..+|.+...+..... +++.....+...++-+++++|+. +|+|||+|++||+++.+|++++.|||.++.
T Consensus 76 ld~~rgg~lft~l~~~~~------f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEVM------FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccCCc------hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 999999999998876554 77888888999999999999999 999999999999999999999999999987
Q ss_pred hhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCC
Q 004218 615 LLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHE 673 (767)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 673 (767)
.-+.. ..+||..|||||++. ....++|.||||++++||+||..||..
T Consensus 147 ~v~~~----------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 147 AVKEK----------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhhh----------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 64421 127899999999987 568899999999999999999999965
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=2.5e-20 Score=195.96 Aligned_cols=203 Identities=23% Similarity=0.266 Sum_probs=130.4
Q ss_pred EEeCCCCeeeecCCCccccCCCCCcEEEccCCcccc----cCCccccCCCCCCEEEcccccCcc------cCCccCCCCC
Q 004218 6 YLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTG----KIPGSLHNLTNIQIIRMAHNLLEG------TVPPGLGNLP 75 (767)
Q Consensus 6 ~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~l~~n~i~~------~~~~~~~~l~ 75 (767)
.|+|+++.+++.--...+..+.+|++|+++++.+.. .++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 588999998743333445568889999999999853 366778889999999999998872 3445677889
Q ss_pred CCcEEeecCccccCCCCCCccccccccCC---CCCCEEECcCCcceee----cCchhhhh-ccccCeEEccCCcccc---
Q 004218 76 FLKMYNIGFNKIVGSGDEGLSFITSLTNS---TRLNFLAFDGNQFEGE----IPESIGNL-SNVLSKLYMGGNRFYG--- 144 (767)
Q Consensus 76 ~L~~L~l~~n~l~~~~~~~~~~~~~l~~l---~~L~~L~l~~n~l~~~----~~~~~~~l-~~~L~~L~l~~n~i~~--- 144 (767)
+|+.|++++|.+... .+..+..+ ++|++|++++|++++. +...+..+ .+ |++|++++|.+++
T Consensus 82 ~L~~L~l~~~~~~~~------~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~-L~~L~L~~n~l~~~~~ 154 (319)
T cd00116 82 GLQELDLSDNALGPD------GCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPA-LEKLVLGRNRLEGASC 154 (319)
T ss_pred ceeEEEccCCCCChh------HHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCC-ceEEEcCCCcCCchHH
Confidence 999999999988642 22222223 5699999999998732 22333444 34 7777777777762
Q ss_pred -cCCccccCCCCCCEEECcCCcCccc----CccccCCCCCCCEEEccCCcccccc----CcCcccCCCCceeeCCCCcCC
Q 004218 145 -KIPTSIGRLRSLTLLNLSYNSISGE----ILTEIGQLQELQSLDLAGNQISGSI----PNTLGNLKKLNQIDLSGNELA 215 (767)
Q Consensus 145 -~~~~~l~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~N~l~ 215 (767)
.++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+.+.. +..+..+++|++|++++|+++
T Consensus 155 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~ 234 (319)
T cd00116 155 EALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLT 234 (319)
T ss_pred HHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCc
Confidence 2333455556666666666666632 1222334456666666666654221 222334445555555555544
No 444
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.77 E-value=9e-20 Score=187.06 Aligned_cols=202 Identities=26% Similarity=0.363 Sum_probs=139.2
Q ss_pred CCCCCCccccccceEEEEEEeCC----CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEe-------eeecCC
Q 004218 456 NFSHENLIGSGSFGSVYKGYLRE----GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLIT-------SCSSLD 524 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~-------~~~~~~ 524 (767)
.+.+.+..+..+++.++..+... .+.++.+..+...........+++..+....|-+..-+.+ ......
T Consensus 245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~ 324 (516)
T KOG1033|consen 245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNK 324 (516)
T ss_pred cccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccc
Confidence 34445556666666666554322 2334444443333222333344444444443333333322 111111
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCce
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTA 604 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~ 604 (767)
.....+++|.|++|+..+|.+++...+. ....++.....++.|++.|++| + +.+|+|+||.||++..+..+
T Consensus 325 v~~~~~lyI~Mn~c~~~tledWl~rr~~---~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~ 395 (516)
T KOG1033|consen 325 VGKKVYLYIQMNLCEKETLEDWLRRRRT---GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQL 395 (516)
T ss_pred cccccchhhhhhhhhhhhHHHHhhCCCc---ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhh
Confidence 2223468999999999999999976554 3457888999999999999999 5 99999999999999999999
Q ss_pred EEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHh
Q 004218 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFT 666 (767)
Q Consensus 605 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t 666 (767)
||+|||+.....................||..||+||.+.+..|+.++||||+|++++|++.
T Consensus 396 kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 396 KIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 99999999765444322222333455679999999999999999999999999999999997
No 445
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=2.1e-18 Score=193.84 Aligned_cols=202 Identities=20% Similarity=0.220 Sum_probs=155.4
Q ss_pred HHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCC---CCCceeEEeeeecCC
Q 004218 448 DELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTR---HRNLVKLITSCSSLD 524 (767)
Q Consensus 448 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~ 524 (767)
.+.......|.+.+.+|+|+||.||+|...+|+.||+|+-+..+. -+|.--.+++.+++ -+.|..+..++.
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~--- 764 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHV--- 764 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHc---
Confidence 344556678889999999999999999988899999998653322 22222233444444 233444444322
Q ss_pred cccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC----
Q 004218 525 FKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE---- 600 (767)
Q Consensus 525 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~---- 600 (767)
..+.-++|+||.+.|||.+++...+ .++|.-++.++.|++..+++||.. +||||||||+|.++..
T Consensus 765 --~~~~S~lv~ey~~~Gtlld~~N~~~------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~ 833 (974)
T KOG1166|consen 765 --FQNASVLVSEYSPYGTLLDLINTNK------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICA 833 (974)
T ss_pred --cCCcceeeeeccccccHHHhhccCC------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCC
Confidence 1222389999999999999998443 499999999999999999999999 9999999999999952
Q ss_pred ---CCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCC
Q 004218 601 ---DMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670 (767)
Q Consensus 601 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p 670 (767)
..-++|+|||.+-.+.- ..........++|-.+--+|+..++++++.+|.|.++.+++.|+.|++-
T Consensus 834 ~~~~~~l~lIDfG~siDm~l----fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 834 DSDSKGLYLIDFGRSIDMKL----FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred CCcccceEEEecccceeeeE----cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 34589999999965422 1222344567789999999999999999999999999999999999864
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=6.4e-18 Score=166.56 Aligned_cols=141 Identities=23% Similarity=0.160 Sum_probs=109.7
Q ss_pred CCCCCCccccccceEEEEEE--eCCCcEEEEEEeeccCCc------------------------chhhHHHHHHHHhcCC
Q 004218 456 NFSHENLIGSGSFGSVYKGY--LREGISVAVKVLDIESTG------------------------TWKSFFAECEALRNTR 509 (767)
Q Consensus 456 ~~~~~~~lg~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 509 (767)
-|++.+.||+|++|.||+|. ..+|+.||+|+++..... ....+.+|++.++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 457999999998643211 0123568999999996
Q ss_pred CC--CceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCC-e
Q 004218 510 HR--NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVP-I 586 (767)
Q Consensus 510 h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-i 586 (767)
+. .+.+++++. ..++||||++++++........ .....++..++.|++.++++||+. + |
T Consensus 109 ~~~i~~p~~~~~~---------~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 109 EAGVPVPKPIAWR---------RNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred hcCCCCCeeeEec---------CceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 53 344444431 1389999999988876643221 255667789999999999999999 9 9
Q ss_pred EeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 587 VHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 587 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
+||||||+||+++ ++.++|+|||.+...
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999999999 889999999998643
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=7.2e-17 Score=156.15 Aligned_cols=144 Identities=24% Similarity=0.167 Sum_probs=111.7
Q ss_pred HHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCc----------------------chhhHHHHHHHH
Q 004218 448 DELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTG----------------------TWKSFFAECEAL 505 (767)
Q Consensus 448 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l 505 (767)
.++.+....|.+.+.||+|+||.||++...+|+.||||+++..... ....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 3444444458889999999999999999888999999987543210 011356788888
Q ss_pred hcCCCCC--ceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 004218 506 RNTRHRN--LVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCE 583 (767)
Q Consensus 506 ~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 583 (767)
..+.|++ +...++. ...++||||++|++|.+.... .....++.+++.++.++|+.
T Consensus 88 ~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~-- 144 (198)
T cd05144 88 KALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH-- 144 (198)
T ss_pred HHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC--
Confidence 8887763 4444432 223899999999999765421 23567889999999999998
Q ss_pred CCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 584 VPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 584 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
+|+||||||+||++++++.++|+|||.+...
T Consensus 145 -gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 145 -GIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred -CCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 9999999999999999999999999999643
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.8e-16 Score=176.92 Aligned_cols=146 Identities=21% Similarity=0.248 Sum_probs=113.2
Q ss_pred cCHHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeecc--CC------cchhhHHHHHHHHhcCCCCCceeE
Q 004218 445 ISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIE--ST------GTWKSFFAECEALRNTRHRNLVKL 516 (767)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~e~~~l~~l~h~niv~~ 516 (767)
.++.........|...+.||+|+||.||+|.+.. ..+++|+.... .. ...+++.+|+++++.++|++++..
T Consensus 323 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~-~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p 401 (535)
T PRK09605 323 VTWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLG-RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTP 401 (535)
T ss_pred eeeccccccccccCccceeccCCcEEEEEEeecC-ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCee
Confidence 3444444555666778999999999999998764 34555543211 11 123467899999999999998887
Q ss_pred EeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCe
Q 004218 517 ITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNI 596 (767)
Q Consensus 517 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NI 596 (767)
..++.. ....++||||+++++|.+++. ....++.|+++++.|||+. +++|||+||+||
T Consensus 402 ~~~~~~-----~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NI 459 (535)
T PRK09605 402 VIYDVD-----PEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNF 459 (535)
T ss_pred EEEEEe-----CCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHE
Confidence 666432 223489999999999999874 3467899999999999999 999999999999
Q ss_pred eeCCCCceEEccccchhh
Q 004218 597 LLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 597 l~~~~~~~kl~Dfg~a~~ 614 (767)
++ +++.++|+|||+++.
T Consensus 460 Ll-~~~~~~liDFGla~~ 476 (535)
T PRK09605 460 IV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EE-ECCcEEEEeCccccc
Confidence 99 678999999999964
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=1.8e-16 Score=155.64 Aligned_cols=133 Identities=24% Similarity=0.331 Sum_probs=108.4
Q ss_pred CccccccceEEEEEEeCCCcEEEEEEeeccCCc--------chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIESTG--------TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
+.||+|++|.||+|.+ .|..|++|+....... ....+.+|++++..+.|+++.....++.. ....+
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-----PENFI 75 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-----CCCCE
Confidence 5799999999999988 5778999986533211 12357789999999999888766655432 23458
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
+||||++|++|.+++... .. ++..++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+
T Consensus 76 lv~e~~~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSN---------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred EEEEEeCCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 999999999999998542 12 7889999999999999999 999999999999999 788999999988
Q ss_pred h
Q 004218 613 R 613 (767)
Q Consensus 613 ~ 613 (767)
.
T Consensus 142 ~ 142 (211)
T PRK14879 142 E 142 (211)
T ss_pred c
Confidence 5
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=6.8e-17 Score=177.71 Aligned_cols=172 Identities=28% Similarity=0.440 Sum_probs=123.2
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeE
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLA 532 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 532 (767)
...|..++.|..|++|.||.++++. .+.+|+|+=+ .+ -|++ ||..+.+. .+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----------lilR-----nilt~a~n-----------pf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----------LILR-----NILTFAGN-----------PF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----------hhhh-----ccccccCC-----------cc
Confidence 3578889999999999999999875 6778885422 11 1111 12222221 12
Q ss_pred EEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccch
Q 004218 533 LVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLA 612 (767)
Q Consensus 533 lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 612 (767)
.| |+-.+.+...+. ++. +++.+++|+|+. ||+|||+||+|.+|+.-|++|++|||++
T Consensus 134 vv------gDc~tllk~~g~------lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 134 VV------GDCATLLKNIGP------LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred ee------chhhhhcccCCC------Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 22 344444443222 332 237899999999 9999999999999999999999999999
Q ss_pred hhhhhhcCCC---------ccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCCCCccc
Q 004218 613 RSLLERIGNQ---------SSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPTHESFA 676 (767)
Q Consensus 613 ~~~~~~~~~~---------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 676 (767)
+......... ...-.....+||+.|.|||++....|+..+|+|++|+|+||.+-|+.||....+
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 8654322110 000111346799999999999999999999999999999999999999977543
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=4.9e-16 Score=150.92 Aligned_cols=130 Identities=24% Similarity=0.301 Sum_probs=101.7
Q ss_pred ccccccceEEEEEEeCCCcEEEEEEeeccCCc--------chhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEE
Q 004218 462 LIGSGSFGSVYKGYLREGISVAVKVLDIESTG--------TWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLAL 533 (767)
Q Consensus 462 ~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 533 (767)
.||+|+||.||+|.+. +..|++|........ ...++.+|+++++.+.|+++.....++. .....++
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~l 74 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKTI 74 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCEE
Confidence 4899999999999964 788999986432111 1245678999999998876544333322 2233489
Q ss_pred EEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 534 VYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 534 v~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
||||++|++|.+++.... . .++.+++.++.++|+. +++|||++|.||+++ ++.++++|||.+.
T Consensus 75 v~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred EEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 999999999999875421 1 7899999999999999 999999999999999 7899999999885
Q ss_pred h
Q 004218 614 S 614 (767)
Q Consensus 614 ~ 614 (767)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 3
No 452
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.60 E-value=3.7e-15 Score=143.19 Aligned_cols=135 Identities=27% Similarity=0.279 Sum_probs=96.5
Q ss_pred CCccccccceEEEEEEeCCCcEEEEEEeeccCCc--chhhH----------------------HHHHHHHhcCCCC--Cc
Q 004218 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTG--TWKSF----------------------FAECEALRNTRHR--NL 513 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~----------------------~~e~~~l~~l~h~--ni 513 (767)
.+.||+|+||.||+|...+++.||||++...... ..... ..|.+.+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999888999999998643221 11111 2455555555333 23
Q ss_pred eeEEeeeecCCcccceeeEEEEeecCCCChhhh-hcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCCeEeecC
Q 004218 514 VKLITSCSSLDFKNMEFLALVYEFLGNGSLGDW-IHGERKNEHGNGLNFLERLNIAIDIASALDYLHN-DCEVPIVHCDL 591 (767)
Q Consensus 514 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~Dl 591 (767)
.+.++. ...++||||++++++... +.... .. .++..++.+++.++.++|. . +|+||||
T Consensus 82 ~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl 141 (187)
T cd05119 82 PKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLYREA---GLVHGDL 141 (187)
T ss_pred CceEec---------CCCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCC
Confidence 444433 123899999999654321 11110 11 5678899999999999999 7 9999999
Q ss_pred CCCCeeeCCCCceEEccccchhhh
Q 004218 592 KPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 592 kp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
||+||+++ ++.++++|||.+...
T Consensus 142 ~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 142 SEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred ChhhEEEE-CCcEEEEECcccccc
Confidence 99999999 899999999999643
No 453
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=1.7e-16 Score=175.75 Aligned_cols=255 Identities=25% Similarity=0.310 Sum_probs=186.4
Q ss_pred hcCCCCCCccccccceEEEEEEeCC--CcEEEEEEeeccC--CcchhhHHHHHHHHhcCC-CCCceeEEeeeecCCcccc
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE--GISVAVKVLDIES--TGTWKSFFAECEALRNTR-HRNLVKLITSCSSLDFKNM 528 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 528 (767)
...|.+.+.||+|+|+.|-.+.... ...+|+|.+.... .........|..+-+.+. |+|++.+++. ..+.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCC
Confidence 4578888889999999998887643 4456777664432 223344556777777776 9999999998 4455
Q ss_pred eeeEEEEeecCCCChhhhh-cccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCCeEeecCCCCCeeeCCCC-ceE
Q 004218 529 EFLALVYEFLGNGSLGDWI-HGERKNEHGNGLNFLERLNIAIDIASALDYLH-NDCEVPIVHCDLKPGNILLDEDM-TAK 605 (767)
Q Consensus 529 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dlkp~NIl~~~~~-~~k 605 (767)
...++++||..++++.+.+ .... ...+...+..++.|+..++.|+| .. ++.|||+||+|.+++..+ ..+
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred cccccccCcccccccccccccCCc-----cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 6669999999999999888 3322 13667778889999999999999 77 999999999999999999 999
Q ss_pred EccccchhhhhhhcCCCccccccccccC-CCCccCccccCCC-CCCCcccchhhhHHHHHHHhCCCCCCCcccCCcchhh
Q 004218 606 VGDFGLARSLLERIGNQSSISSTHVLKG-SIGYIPPEYGLGE-KPSTAGDVYSFGVMLLEIFTGMSPTHESFAGEVSLVK 683 (767)
Q Consensus 606 l~Dfg~a~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 683 (767)
+.|||+|..+....+ .........| ++.|+|||...+. ...+..|+||.|+++..+++|..||+...........
T Consensus 166 ~~df~~At~~~~~~g---~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~ 242 (601)
T KOG0590|consen 166 IADFGLATAYRNKNG---AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS 242 (601)
T ss_pred CCCchhhccccccCC---cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee
Confidence 999999987655211 1122234457 9999999998885 4478899999999999999999999876655554444
Q ss_pred Hhhhhcc--cchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 004218 684 WVESNFP--KNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIREALR 746 (767)
Q Consensus 684 ~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~evl~ 746 (767)
|...... .....-...... ++..+++..+|..|.+.+++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~----------------------~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 243 WKSNKGRFTQLPWNSISDQAH----------------------DLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ecccccccccCccccCChhhh----------------------hcccccccCCchhccccccccc
Confidence 4433211 111111111111 1455688889999999887643
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=7.9e-15 Score=135.91 Aligned_cols=135 Identities=22% Similarity=0.224 Sum_probs=110.3
Q ss_pred CCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCC--CCceeEEeeeecCCcccceeeEEEEe
Q 004218 459 HENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRH--RNLVKLITSCSSLDFKNMEFLALVYE 536 (767)
Q Consensus 459 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e 536 (767)
+.+.+|+|.++.||++...+ ..+++|....... ...+.+|+.+++.++| ..+++++++.. ..+..+++||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-----~~~~~~~v~e 73 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGE-----SDGWSYLLME 73 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-----CCCccEEEEE
Confidence 45789999999999999864 7899999864432 4678899999999976 58888888743 3356799999
Q ss_pred ecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhh
Q 004218 537 FLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARS 614 (767)
Q Consensus 537 ~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 614 (767)
|++++++..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 74 ~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 74 WIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 9998777644 3456677899999999999986444799999999999999989999999999864
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.57 E-value=2e-14 Score=142.07 Aligned_cols=139 Identities=18% Similarity=0.153 Sum_probs=104.8
Q ss_pred CCccc-cccceEEEEEEeCCCcEEEEEEeeccC-------------CcchhhHHHHHHHHhcCCCCCc--eeEEeeeecC
Q 004218 460 ENLIG-SGSFGSVYKGYLREGISVAVKVLDIES-------------TGTWKSFFAECEALRNTRHRNL--VKLITSCSSL 523 (767)
Q Consensus 460 ~~~lg-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~ 523 (767)
...|| .|+.|+||.+... +..++||.+.... ......+.+|++++..+.|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35677 8889999999876 7789999874311 1223567889999999988775 6666654321
Q ss_pred CcccceeeEEEEeecCC-CChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC
Q 004218 524 DFKNMEFLALVYEFLGN-GSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM 602 (767)
Q Consensus 524 ~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~ 602 (767)
. ......++|||+++| .+|.+++.... ++.. .+.+++.++.+||+. ||+||||||.||+++.++
T Consensus 115 ~-~~~~~~~lV~e~l~G~~~L~~~l~~~~-------l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 H-GLFYRADILIERIEGARDLVALLQEAP-------LSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred c-CcceeeeEEEEecCCCCCHHHHHhcCC-------CCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 1 111123699999997 69999886422 4543 357899999999999 999999999999999989
Q ss_pred ceEEccccchhh
Q 004218 603 TAKVGDFGLARS 614 (767)
Q Consensus 603 ~~kl~Dfg~a~~ 614 (767)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998864
No 456
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.52 E-value=1.7e-14 Score=138.75 Aligned_cols=213 Identities=23% Similarity=0.333 Sum_probs=148.1
Q ss_pred HHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 004218 504 ALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCE 583 (767)
Q Consensus 504 ~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 583 (767)
-+-++.|.|+++++.|+.+....+.....+++|||..|++.+++++.+.. ...+......+|+.||..||.|||+. .
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~--~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN--QKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh--hhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 34455799999999999887777778889999999999999999876543 34588888899999999999999995 7
Q ss_pred CCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHH
Q 004218 584 VPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLE 663 (767)
Q Consensus 584 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e 663 (767)
++|+|+++..+-|++..+|-+|++---........ .......+....+-++|.|||.-.....+.++|||+||+...|
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~--~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSV--NSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhh--hhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 89999999999999999998988432211110000 0000111223346789999998777777889999999999999
Q ss_pred HHhCCCCCCCcccCCcchhhHhhhhcccchhhhccHHHHHhhhcchhhHHHHHHHHHHHHHHHhccccCCCCCCCCCHHH
Q 004218 664 IFTGMSPTHESFAGEVSLVKWVESNFPKNAQQVLDRELRQLMMSSESQTIQLHDCLITIIESVGLSCTTESPGGRIDIRE 743 (767)
Q Consensus 664 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rpt~~e 743 (767)
|..+..-.......... ...+...+...... +-+..+..|++..|..||+|.+
T Consensus 275 mailEiq~tnseS~~~~-----------------ee~ia~~i~~len~----------lqr~~i~kcl~~eP~~rp~ar~ 327 (458)
T KOG1266|consen 275 MAILEIQSTNSESKVEV-----------------EENIANVIIGLENG----------LQRGSITKCLEGEPNGRPDARL 327 (458)
T ss_pred HHHheeccCCCcceeeh-----------------hhhhhhheeeccCc----------cccCcCcccccCCCCCCcchhh
Confidence 99887542111110000 00000000000000 0012667899999999999999
Q ss_pred HHHHH
Q 004218 744 ALRRL 748 (767)
Q Consensus 744 vl~~L 748 (767)
++.+.
T Consensus 328 llfHp 332 (458)
T KOG1266|consen 328 LLFHP 332 (458)
T ss_pred hhcCc
Confidence 88764
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=1.3e-13 Score=155.38 Aligned_cols=115 Identities=36% Similarity=0.561 Sum_probs=101.9
Q ss_pred ceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEecc
Q 004218 276 NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLT 355 (767)
Q Consensus 276 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 355 (767)
.++.|+|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcCcCCCCc--cccccccccccCCcCccccC---CCC
Q 004218 356 FNNLEGVVPREG--IFRHTSMVHLEGNPKLCLHL---GCE 390 (767)
Q Consensus 356 ~N~l~~~~~~~~--~~~~~~~~~l~~Np~~c~~~---~c~ 390 (767)
+|+++|..|... ...+...+.+.+|+..|+.. .|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCCCCCc
Confidence 999999888752 22345577899999999732 564
No 458
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.1e-13 Score=149.60 Aligned_cols=201 Identities=33% Similarity=0.549 Sum_probs=149.5
Q ss_pred EEEccCCcccccCCccccCCCCCCEEEcccccCcccCCccCCCCC-CCcEEeecCccccCCCCCCccccccccCCCCCCE
Q 004218 31 GFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLP-FLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNF 109 (767)
Q Consensus 31 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~ 109 (767)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++.. ++..+.+++.|+.
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~~-------l~~~~~~l~~L~~ 167 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIES-------LPSPLRNLPNLKN 167 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchhh-------hhhhhhccccccc
Confidence 5777777775 23444666688888888888888 6676677774 88888888888763 3356778888888
Q ss_pred EECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCc
Q 004218 110 LAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQ 189 (767)
Q Consensus 110 L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 189 (767)
|++++|+++ .+|...+..+. |+.|++++|++. .+|........|++|++++|.+. ..+..+.++.++..|.+.+|+
T Consensus 168 L~l~~N~l~-~l~~~~~~~~~-L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~ 243 (394)
T COG4886 168 LDLSFNDLS-DLPKLLSNLSN-LNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNK 243 (394)
T ss_pred cccCCchhh-hhhhhhhhhhh-hhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCce
Confidence 888888888 66666666666 888888888887 56666556667888888888544 446677788888888888888
Q ss_pred cccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhc
Q 004218 190 ISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEIL 247 (767)
Q Consensus 190 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 247 (767)
+. ..+..+..+++++.|++++|+++...+ ++.+.+|+.|++++|.+....+....
T Consensus 244 ~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 244 LE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhhc
Confidence 87 446777888888888888888875433 77888888888888888755554433
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=2.8e-13 Score=145.87 Aligned_cols=143 Identities=27% Similarity=0.300 Sum_probs=99.9
Q ss_pred CCccccccceEEEEEEeCCCcEEEEEEeeccCCcch----------------------------------------hhHH
Q 004218 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTW----------------------------------------KSFF 499 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~ 499 (767)
.+.||.|++|.||+|+.++|+.||||+.+....... -++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 367999999999999999999999999854311100 0244
Q ss_pred HHHHHHhcC----CCCCceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHH-H
Q 004218 500 AECEALRNT----RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS-A 574 (767)
Q Consensus 500 ~e~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~-~ 574 (767)
+|++.+.++ ++.+-+.+-.++.. .....++||||++|++|.++...... .. ....++.+++. .
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~~~-----~~---~~~~ia~~~~~~~ 269 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALDEA-----GL---DRKALAENLARSF 269 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHHhc-----CC---CHHHHHHHHHHHH
Confidence 555555554 23333333333321 12234899999999999987653221 12 23456666666 4
Q ss_pred HHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhh
Q 004218 575 LDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLE 617 (767)
Q Consensus 575 l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 617 (767)
+..+|.. |++|+|+||.||+++.++.++++|||++..+.+
T Consensus 270 l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 270 LNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 7888988 999999999999999999999999999976643
No 460
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=1.3e-14 Score=149.44 Aligned_cols=193 Identities=29% Similarity=0.513 Sum_probs=126.4
Q ss_pred CCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEE
Q 004218 105 TRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLD 184 (767)
Q Consensus 105 ~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~ 184 (767)
+--...||+.|++. ++|..++.+.. |+.|.|..|.+. .+|..+.++..|+.|+|+.|+++ .+|..++.|+ |+.|-
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~-Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVS-LESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHH-HHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 33455677777777 77777777776 777777777776 66777777777777777777777 5666666665 77777
Q ss_pred ccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcccccccceeecccccCC
Q 004218 185 LAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLD 264 (767)
Q Consensus 185 L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~ 264 (767)
+++|+++ .+|..++.+..|..|+.+.|++. .+|..++++.+|+.|.+..|++. .+|.++.
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~----------------- 209 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC----------------- 209 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-----------------
Confidence 7777777 66666777777777777777776 35666677777777777777766 4444433
Q ss_pred CCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCC---ceEEEcCCc
Q 004218 265 GTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKG---LEVLDLSSN 333 (767)
Q Consensus 265 ~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~---L~~L~Ls~N 333 (767)
.| .|..||+|.|+++ .+|-.|..|..|++|-|.+|.++ ..|..++..-. -++|+..-+
T Consensus 210 --------~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 210 --------SL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred --------CC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 22 3566666666666 55666666666666666666665 44444433322 244555444
No 461
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=7e-15 Score=151.33 Aligned_cols=193 Identities=34% Similarity=0.511 Sum_probs=108.7
Q ss_pred eEEccCCcccccCCc--cccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCC
Q 004218 134 KLYMGGNRFYGKIPT--SIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211 (767)
Q Consensus 134 ~L~l~~n~i~~~~~~--~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 211 (767)
.|.|++-++.. .|. +=..+..-...||+.|++. ++|..+..+..|+.|.|..|.|. .+|..++++..|+.|+|+.
T Consensus 54 ~l~Ls~rrlk~-fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~ 130 (722)
T KOG0532|consen 54 RLLLSGRRLKE-FPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSS 130 (722)
T ss_pred ccccccchhhc-CCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhcc
Confidence 35555555542 221 1133455566677777776 56666666667777777777776 6666677777777777777
Q ss_pred CcCCCCCcccccCccccccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCC
Q 004218 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNL 291 (767)
Q Consensus 212 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~ 291 (767)
|+++ ..|..+..++ |+.|.+++|+++ .+|..++ .+..|..||.+.|.+. .+
T Consensus 131 NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig-------------------------~~~tl~~ld~s~nei~-sl 181 (722)
T KOG0532|consen 131 NQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIG-------------------------LLPTLAHLDVSKNEIQ-SL 181 (722)
T ss_pred chhh-cCChhhhcCc-ceeEEEecCccc-cCCcccc-------------------------cchhHHHhhhhhhhhh-hc
Confidence 7775 4555555444 666666666666 4444444 4444555555555554 34
Q ss_pred CcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcC
Q 004218 292 PNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEG 361 (767)
Q Consensus 292 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 361 (767)
|..++++.+|+.|++..|++. .+|..+..++ |..||+|.|+++ .+|-.|.+|..|++|-|.+|+|+.
T Consensus 182 psql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 182 PSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred hHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCCC
Confidence 444555555555555555554 3344444333 555555555555 455555555555555555555554
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.43 E-value=2e-13 Score=147.63 Aligned_cols=201 Identities=33% Similarity=0.513 Sum_probs=167.3
Q ss_pred EEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCC-CCCEEEcccccCcccCCccCCCCCCCcEEeecC
Q 004218 6 YLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLT-NIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGF 84 (767)
Q Consensus 6 ~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~ 84 (767)
.|+++.|.+. .-+..+. .+..++.|++.+|.+. .+|.....++ +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~-~~~~~~~-~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLR-SNISELL-ELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccc-cCchhhh-cccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 5778888874 3333443 3678999999999999 6777778885 9999999999998 7777889999999999999
Q ss_pred ccccCCCCCCccccccccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCC
Q 004218 85 NKIVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYN 164 (767)
Q Consensus 85 n~l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n 164 (767)
|++.. ++.....++.|+.|++++|++. .+|........ |++|.+++|++. ..+..+.++.++..|.+.+|
T Consensus 173 N~l~~-------l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~-L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 173 NDLSD-------LPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSA-LEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred chhhh-------hhhhhhhhhhhhheeccCCccc-cCchhhhhhhh-hhhhhhcCCcce-ecchhhhhcccccccccCCc
Confidence 99984 3444448899999999999999 78887666666 999999999654 56778999999999999999
Q ss_pred cCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCccccc
Q 004218 165 SISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFG 223 (767)
Q Consensus 165 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 223 (767)
++. ..+..+..++++++|++++|+++.. +. ++.+.+++.|++++|.+....+....
T Consensus 243 ~~~-~~~~~~~~l~~l~~L~~s~n~i~~i-~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 243 KLE-DLPESIGNLSNLETLDLSNNQISSI-SS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred eee-eccchhccccccceecccccccccc-cc-ccccCccCEEeccCccccccchhhhc
Confidence 998 4467888999999999999999944 44 89999999999999999876665543
No 463
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=7.3e-13 Score=139.62 Aligned_cols=200 Identities=30% Similarity=0.296 Sum_probs=153.5
Q ss_pred CCCCCCcccc--ccceEEEEEEe--C-CCcEEEEEEeecc--CCcchhhHHHHHHHHhcC-CCCCceeEEeeeecCCccc
Q 004218 456 NFSHENLIGS--GSFGSVYKGYL--R-EGISVAVKVLDIE--STGTWKSFFAECEALRNT-RHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 456 ~~~~~~~lg~--G~~g~V~~~~~--~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 527 (767)
.+.+.+.+|. |.+|.||.+.. + ++..+|+|.-+.. .......-.+|+...+.+ .|++.++.+.. +..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4566788999 99999999986 3 4888999984332 223334445677766666 48999986655 566
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCCeEeecCCCCCeeeCCC-C
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIAS----ALDYLHNDCEVPIVHCDLKPGNILLDED-M 602 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~ 602 (767)
++..++-+|++. .++.++.+... ..++....+.+..+..+ |+.++|+. +++|-|+||.||+...+ .
T Consensus 190 ~~~lfiqtE~~~-~sl~~~~~~~~-----~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~ 260 (524)
T KOG0601|consen 190 SGILFIQTELCG-ESLQSYCHTPC-----NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWT 260 (524)
T ss_pred CCcceeeecccc-chhHHhhhccc-----ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccc
Confidence 777899999985 68888877643 23777888888899988 99999999 99999999999999998 8
Q ss_pred ceEEccccchhhhhhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCCCC
Q 004218 603 TAKVGDFGLARSLLERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSPT 671 (767)
Q Consensus 603 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~ 671 (767)
..+++|||+...+.+..-....... ....|...|++||... +.++.++|+|++|.++.+..++..+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~ 327 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVS-KRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLP 327 (524)
T ss_pred eeecCCcceeEEccCCccccceeee-ecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccc
Confidence 8999999999877654322221111 2224778899999854 46788999999999999999987664
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.32 E-value=3.4e-12 Score=138.57 Aligned_cols=150 Identities=20% Similarity=0.169 Sum_probs=95.2
Q ss_pred hcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeeccCCc----------------------------------chh--
Q 004218 454 TGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIESTG----------------------------------TWK-- 496 (767)
Q Consensus 454 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~-- 496 (767)
...|+. +.+|+|++|.||+|+.++ |+.||||+.++.... ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 789999999999999987 999999998643110 001
Q ss_pred ----hHHHHHHHHhcC----CCCCceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHH
Q 004218 497 ----SFFAECEALRNT----RHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIA 568 (767)
Q Consensus 497 ----~~~~e~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~ 568 (767)
++.+|+..+.++ .+...+.+-.++.+ .....++||||++|+++.++-.-.........+....+..++
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~ 273 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFF 273 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHH
Confidence 234455444444 23333333333221 122348999999999998753211110000113333334444
Q ss_pred HHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC----ceEEccccchhhhhhh
Q 004218 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM----TAKVGDFGLARSLLER 618 (767)
Q Consensus 569 ~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~----~~kl~Dfg~a~~~~~~ 618 (767)
.|++ .. |++|+|+||.||+++.++ +++++|||++..+.+.
T Consensus 274 ~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 274 TQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 4443 45 999999999999999888 9999999999866543
No 465
>PLN03150 hypothetical protein; Provisional
Probab=99.32 E-value=6.2e-12 Score=141.99 Aligned_cols=111 Identities=35% Similarity=0.527 Sum_probs=101.9
Q ss_pred ceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCc
Q 004218 254 TIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSN 333 (767)
Q Consensus 254 ~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N 333 (767)
..++|++|.+.+.+|..++.+++|+.|+|++|.+++.+|..++.+++|+.|+|++|++++.+|+.+..+++|+.|+|++|
T Consensus 421 ~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N 500 (623)
T PLN03150 421 DGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN 500 (623)
T ss_pred EEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC
Confidence 44699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcccccc-ccCceEeccCCcCcCcCC
Q 004218 334 KLSGSIPSDLQNL-RALRSLNLTFNNLEGVVP 364 (767)
Q Consensus 334 ~l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~ 364 (767)
.+++.+|..+..+ .++..+++.+|+..+..|
T Consensus 501 ~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 501 SLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred cccccCChHHhhccccCceEEecCCccccCCC
Confidence 9999999988764 467889999998665443
No 466
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.29 E-value=4.8e-14 Score=137.29 Aligned_cols=236 Identities=17% Similarity=0.247 Sum_probs=140.4
Q ss_pred CCCccEEeCCCCeeeecCCC---ccccCCCCCcEEEccCC---cccccCCc-------cccCCCCCCEEEcccccCcccC
Q 004218 1 MTSLVYLGLASNQLWGEIPY---DVGDKLPNLLGFNFCFN---KFTGKIPG-------SLHNLTNIQIIRMAHNLLEGTV 67 (767)
Q Consensus 1 l~~L~~L~l~~n~l~~~ip~---~~~~~l~~L~~L~l~~n---~l~~~~~~-------~l~~l~~L~~L~l~~n~i~~~~ 67 (767)
+.+++.|+||+|.+..+-.. ....+.++|++.++++- ++...+|. .+...++|++||||.|.+.-..
T Consensus 29 ~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 29 MDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred cCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 45678888888887532211 12224567777777653 22334443 3456678888888888877544
Q ss_pred Ccc----CCCCCCCcEEeecCccccCCCCCCcc---------ccccccCCCCCCEEECcCCcceeecCchh----hhhcc
Q 004218 68 PPG----LGNLPFLKMYNIGFNKIVGSGDEGLS---------FITSLTNSTRLNFLAFDGNQFEGEIPESI----GNLSN 130 (767)
Q Consensus 68 ~~~----~~~l~~L~~L~l~~n~l~~~~~~~~~---------~~~~l~~l~~L~~L~l~~n~l~~~~~~~~----~~l~~ 130 (767)
++. +..+..|++|+|.+|.+. |.++-. ...-...-++|+.+...+|++.......+ ...+.
T Consensus 109 ~~~l~~ll~s~~~L~eL~L~N~Glg--~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 109 IRGLEELLSSCTDLEELYLNNCGLG--PEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPT 186 (382)
T ss_pred hHHHHHHHHhccCHHHHhhhcCCCC--hhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccc
Confidence 443 345677888888888764 222222 11223344667777777777764433222 23333
Q ss_pred ccCeEEccCCcccc----cCCccccCCCCCCEEECcCCcCccc----CccccCCCCCCCEEEccCCccccccCcCc----
Q 004218 131 VLSKLYMGGNRFYG----KIPTSIGRLRSLTLLNLSYNSISGE----ILTEIGQLQELQSLDLAGNQISGSIPNTL---- 198 (767)
Q Consensus 131 ~L~~L~l~~n~i~~----~~~~~l~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~---- 198 (767)
|+.+.+..|.|.. .+..+|.++++|++|||++|-++.. +...+..+++|++|++++|.++.....+|
T Consensus 187 -leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al 265 (382)
T KOG1909|consen 187 -LEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDAL 265 (382)
T ss_pred -cceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHH
Confidence 7777777777652 2234466777777777777777632 23445566777777777777764333332
Q ss_pred -ccCCCCceeeCCCCcCCCC----CcccccCccccccccccCcccC
Q 004218 199 -GNLKKLNQIDLSGNELASE----IPTSFGNFQNLLSIDLSNNKLN 239 (767)
Q Consensus 199 -~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~ 239 (767)
...++|+.|.|.+|.|+.. +...+...+.|+.|+|++|.+.
T Consensus 266 ~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 266 KESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred hccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 2356777777777777632 1223345677777777777773
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.29 E-value=1.5e-11 Score=130.66 Aligned_cols=167 Identities=21% Similarity=0.231 Sum_probs=127.7
Q ss_pred eCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCC
Q 004218 476 LREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEH 555 (767)
Q Consensus 476 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~ 555 (767)
-.++.+|.|...+..+........+.++.++.++||||+++++. ....+..|+|+|.+. .|..++..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk~------ 100 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLKE------ 100 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHHH------
Confidence 34588899998876655445667788999999999999999998 455568899999984 68888765
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCccccccccccCCC
Q 004218 556 GNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSISSTHVLKGSI 635 (767)
Q Consensus 556 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~ 635 (767)
++...+...+.||+.||.|||+.+ +++|++|.-..|+|+..|+.||++|.++........ ......--.
T Consensus 101 ---l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------~~~~~~~~~ 169 (690)
T KOG1243|consen 101 ---LGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------PAKSLYLIE 169 (690)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc------ccccchhhh
Confidence 446678889999999999999764 999999999999999999999999998864322211 011111223
Q ss_pred CccCccccCCCCCCCcccchhhhHHHHHHHhCC
Q 004218 636 GYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGM 668 (767)
Q Consensus 636 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~ 668 (767)
.|..|+.+.... -..|.|.|||++||++.|.
T Consensus 170 s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 170 SFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 466676543322 3469999999999999993
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.27 E-value=1.6e-12 Score=123.67 Aligned_cols=133 Identities=29% Similarity=0.374 Sum_probs=94.2
Q ss_pred ccCCCCCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCC
Q 004218 101 LTNSTRLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQEL 180 (767)
Q Consensus 101 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L 180 (767)
+...+-|+++||++|.|+ .+.++..-+++ ++.|+++.|+|..+ +.+..+++|+.|||++|.++ ...+.-.++.|+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pk-ir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNI 354 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPK-LRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNI 354 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccc-eeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCE
Confidence 334456778888888887 66666666676 88888888888632 33777788888888888777 444555567788
Q ss_pred CEEEccCCccccccCcCcccCCCCceeeCCCCcCCCC-CcccccCccccccccccCcccCC
Q 004218 181 QSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASE-IPTSFGNFQNLLSIDLSNNKLNG 240 (767)
Q Consensus 181 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~n~l~~ 240 (767)
++|.|++|.|... ..+..+.+|..||+++|+|... ....++++|-|++|.|.+|.+.+
T Consensus 355 KtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 355 KTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 8888888887632 3466777788888888887643 23466777888888888887773
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.26 E-value=7.2e-11 Score=110.97 Aligned_cols=136 Identities=20% Similarity=0.161 Sum_probs=97.6
Q ss_pred CCccccccceEEEEEEeCC-------CcEEEEEEeeccC------------C----------cchhhH----HHHHHHHh
Q 004218 460 ENLIGSGSFGSVYKGYLRE-------GISVAVKVLDIES------------T----------GTWKSF----FAECEALR 506 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~~----~~e~~~l~ 506 (767)
...||.|--+.||.|...+ +..+|||+.+... + ...+.+ .+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999998553 4799999875321 0 001122 37999998
Q ss_pred cCC--CCCceeEEeeeecCCcccceeeEEEEeecCCCChhh-hhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HhCC
Q 004218 507 NTR--HRNLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGD-WIHGERKNEHGNGLNFLERLNIAIDIASALDYL-HNDC 582 (767)
Q Consensus 507 ~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~ 582 (767)
++. .-++.+.+++. .-++||||+++..+.. .+.. ..++..+...+..+++.++..+ |+.
T Consensus 82 rl~~~Gv~vP~pi~~~---------~~~lvME~Ig~~~~~~~~Lkd-------~~~~~~~~~~i~~~i~~~l~~l~H~~- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVLK---------KHVLVMSFIGDDQVPAPKLKD-------AKLNDEEMKNAYYQVLSMMKQLYKEC- 144 (197)
T ss_pred HHHHcCCCCCeEEEec---------CCEEEEEEcCCCCccchhhhc-------cccCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 884 34566666541 1289999997654322 2221 1255566778889999999999 888
Q ss_pred CCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 583 EVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 583 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
++||||+++.||+++ ++.++|+|||.+...
T Consensus 145 --glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 --NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred --CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999997 468999999998654
No 470
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=1.1e-13 Score=134.75 Aligned_cols=257 Identities=19% Similarity=0.253 Sum_probs=127.1
Q ss_pred cccCCCCCCEEEcccccCcc----cCCccCCCCCCCcEEeecCccccCCCC-----CCccccccccCCCCCCEEECcCCc
Q 004218 46 SLHNLTNIQIIRMAHNLLEG----TVPPGLGNLPFLKMYNIGFNKIVGSGD-----EGLSFITSLTNSTRLNFLAFDGNQ 116 (767)
Q Consensus 46 ~l~~l~~L~~L~l~~n~i~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~~~~l~~l~~L~~L~l~~n~ 116 (767)
.+..+.+++.|+||+|.+.. .+...+.+.++|+.-+++.-- ++-+. ....+...|..+++|++|+||+|-
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~f-tGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMF-TGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhh-cCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 34556667777777777664 233445555666666666421 11111 011223344555678888888888
Q ss_pred ceeecCchhhhh----ccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCcccc
Q 004218 117 FEGEIPESIGNL----SNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISG 192 (767)
Q Consensus 117 l~~~~~~~~~~l----~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~ 192 (767)
|....+..+..+ .. |++|+|.+|++.-.-...++. -|..|. .| .....-+.|+++..+.|.+..
T Consensus 104 ~G~~g~~~l~~ll~s~~~-L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~-------kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTD-LEELYLNNCGLGPEAGGRLGR--ALFELA--VN-------KKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred cCccchHHHHHHHHhccC-HHHHhhhcCCCChhHHHHHHH--HHHHHH--HH-------hccCCCcceEEEEeecccccc
Confidence 776666655544 33 777777777775222222111 111111 00 111223445555555555542
Q ss_pred cc----CcCcccCCCCceeeCCCCcCCCC----CcccccCccccccccccCcccCCCCChhhcccccccceeecccccCC
Q 004218 193 SI----PNTLGNLKKLNQIDLSGNELASE----IPTSFGNFQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLD 264 (767)
Q Consensus 193 ~~----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~ 264 (767)
.. ...|...+.|+.+.++.|.|... ....|..+++|+.|||.+|-++.....
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~-------------------- 231 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV-------------------- 231 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH--------------------
Confidence 11 12334445555555555555421 112344556666666666655521111
Q ss_pred CCCchhhcCCCceeEEEccCCCCCCCCCccc-----ccCcccceeeccCccccCC----CCchhhccCCceEEEcCCccc
Q 004218 265 GTLPEEIGMLGNVVTIDLSANGLSGNLPNSF-----KNCKSLEKLLMANNKFSGP----IPNILAELKGLEVLDLSSNKL 335 (767)
Q Consensus 265 ~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~-----~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l 335 (767)
.+...++.+++|+.|++++|.++..-...| ...|+|+.|.|.+|.|+.. +.......+.|..|+|++|++
T Consensus 232 -~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 232 -ALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred -HHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 112233444555555555555543322222 2245666666666666531 222344466777777777777
Q ss_pred C
Q 004218 336 S 336 (767)
Q Consensus 336 ~ 336 (767)
.
T Consensus 311 ~ 311 (382)
T KOG1909|consen 311 G 311 (382)
T ss_pred c
Confidence 4
No 471
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.24 E-value=3.6e-11 Score=113.46 Aligned_cols=130 Identities=22% Similarity=0.168 Sum_probs=95.0
Q ss_pred CCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCc-eeEEeeeecCCcccceeeEEEEeec
Q 004218 460 ENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNL-VKLITSCSSLDFKNMEFLALVYEFL 538 (767)
Q Consensus 460 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~e~~ 538 (767)
.+.++.|.++.||++... ++.|++|+...... ....+.+|+++++.+.+.++ .+++.+.. ...++||||+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~-------~~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP-------ETGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC-------CCCeEEEEec
Confidence 357899999999999876 77899998754321 23456789999998865444 34444321 1237999999
Q ss_pred CCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--CCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 539 GNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC--EVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 539 ~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
+|.++.+.- . ....++.+++++++.||+.. +.+++|||++|.||+++ ++.++++|||.+.
T Consensus 74 ~G~~l~~~~-----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 74 EGSELLTED-----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCCcccccc-----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 998876430 1 11235689999999999982 12359999999999999 6689999999885
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.23 E-value=1.6e-12 Score=123.65 Aligned_cols=131 Identities=32% Similarity=0.401 Sum_probs=83.5
Q ss_pred CCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCCcccccCccccccc
Q 004218 152 RLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEIPTSFGNFQNLLSI 231 (767)
Q Consensus 152 ~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 231 (767)
..+.|++|||++|.|+ .+.++..-+|.++.|++++|.|.. +. .+..+++|+.||||+|.++ ...++-..+-+.++|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 3456677777777776 444555666777777777777762 22 2666777777777777775 234444456667777
Q ss_pred cccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCC-CcccccCcccceeeccCcc
Q 004218 232 DLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNL-PNSFKNCKSLEKLLMANNK 310 (767)
Q Consensus 232 ~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~ 310 (767)
.|++|.|. +| ..++.+-+|..||+++|+|.... ...++++|-|+.|.|.+|+
T Consensus 358 ~La~N~iE-----------------~L----------SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 358 KLAQNKIE-----------------TL----------SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred ehhhhhHh-----------------hh----------hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 77777665 11 12334456677777777765322 3567888888888888888
Q ss_pred ccC
Q 004218 311 FSG 313 (767)
Q Consensus 311 l~~ 313 (767)
+.+
T Consensus 411 l~~ 413 (490)
T KOG1259|consen 411 LAG 413 (490)
T ss_pred ccc
Confidence 874
No 473
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.23 E-value=6.1e-12 Score=144.66 Aligned_cols=290 Identities=19% Similarity=0.276 Sum_probs=129.7
Q ss_pred CCcEEEccCCcccccCCccccCCCCCCEEEccccc--CcccCCccCCCCCCCcEEeecCccccCCCCCCccccccccCCC
Q 004218 28 NLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNL--LEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLTNST 105 (767)
Q Consensus 28 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~--i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~ 105 (767)
..+...+.+|.+. .++.. ...++|++|=+.+|. +....+..|..++.|+.|||++|.-. ..+|..++++-
T Consensus 524 ~~rr~s~~~~~~~-~~~~~-~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l------~~LP~~I~~Li 595 (889)
T KOG4658|consen 524 SVRRMSLMNNKIE-HIAGS-SENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSL------SKLPSSIGELV 595 (889)
T ss_pred heeEEEEeccchh-hccCC-CCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCcc------CcCChHHhhhh
Confidence 3444444444444 23322 122244444444443 22122223444555555555543211 03444445555
Q ss_pred CCCEEECcCCcceeecCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCc--ccCccccCCCCCCCEE
Q 004218 106 RLNFLAFDGNQFEGEIPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSIS--GEILTEIGQLQELQSL 183 (767)
Q Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~--~~~~~~~~~l~~L~~L 183 (767)
+|++|++++..+. .+|..+.++.. |.+|++..+.-...+|.....|++|++|.+...... ......+..+.+|+.|
T Consensus 596 ~LryL~L~~t~I~-~LP~~l~~Lk~-L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~l 673 (889)
T KOG4658|consen 596 HLRYLDLSDTGIS-HLPSGLGNLKK-LIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENL 673 (889)
T ss_pred hhhcccccCCCcc-ccchHHHHHHh-hheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhh
Confidence 5555555555555 55555555555 555555555443344444455555555555544311 1112223333333333
Q ss_pred EccCCccccccCcCcccCCCCc----eeeCCCCcCCCCCcccccCccccccccccCcccCCCCChhhcc------ccccc
Q 004218 184 DLAGNQISGSIPNTLGNLKKLN----QIDLSGNELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKEILS------LSSLT 253 (767)
Q Consensus 184 ~L~~n~i~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------l~~l~ 253 (767)
........ +-..+..++.|. .+.+..+... ..+..+..+.+|+.|.+.++.+.......... ++++.
T Consensus 674 s~~~~s~~--~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~ 750 (889)
T KOG4658|consen 674 SITISSVL--LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLS 750 (889)
T ss_pred eeecchhH--hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHH
Confidence 33222210 001112222222 2222222222 23344555666666666666654221111111 11111
Q ss_pred ceeecccccCCCCCchhhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCC-CCchhhccCCceEEEcCC
Q 004218 254 TIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGP-IPNILAELKGLEVLDLSS 332 (767)
Q Consensus 254 ~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~ 332 (767)
+. ...++... ..+.+.-..++|+.|.+..+.....+.+....+..++.+-+..+.+.+. .-.....++++..+.+++
T Consensus 751 ~~-~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~ 828 (889)
T KOG4658|consen 751 KV-SILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWLPLSF 828 (889)
T ss_pred HH-Hhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEecccCc
Confidence 11 11111111 2333444567888888888887766666777777777766666666654 334444555555444443
No 474
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.1e-12 Score=131.41 Aligned_cols=143 Identities=19% Similarity=0.206 Sum_probs=82.5
Q ss_pred CCCCCCEEECcCCcCcccCc-cccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCCCcCCCCC-cccccCccccc
Q 004218 152 RLRSLTLLNLSYNSISGEIL-TEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSGNELASEI-PTSFGNFQNLL 229 (767)
Q Consensus 152 ~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~ 229 (767)
.+++|+.|.|++|+++.... .....+|+|+.|+|..|............+..|++|+|++|++-... -...+.++.|+
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLN 274 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchh
Confidence 34566677777776663211 22345677777777777433233334455667777777777765322 13445677777
Q ss_pred cccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCC-CCCcccccCcccceeeccC
Q 004218 230 SIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSG-NLPNSFKNCKSLEKLLMAN 308 (767)
Q Consensus 230 ~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~ 308 (767)
.|+++.|.+........ ..-+-...+++|++|+++.|++.+ .....+..+++|+.|.+..
T Consensus 275 ~Lnls~tgi~si~~~d~-------------------~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~ 335 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPDV-------------------ESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITL 335 (505)
T ss_pred hhhccccCcchhcCCCc-------------------cchhhhcccccceeeecccCccccccccchhhccchhhhhhccc
Confidence 77777777662110000 000112346678888888888753 1224556667788888888
Q ss_pred ccccC
Q 004218 309 NKFSG 313 (767)
Q Consensus 309 n~l~~ 313 (767)
|.++.
T Consensus 336 n~ln~ 340 (505)
T KOG3207|consen 336 NYLNK 340 (505)
T ss_pred ccccc
Confidence 88764
No 475
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=2.4e-12 Score=129.00 Aligned_cols=209 Identities=20% Similarity=0.205 Sum_probs=148.4
Q ss_pred CCCCCcEEEccCCcccccCC--ccccCCCCCCEEEcccccCccc--CCccCCCCCCCcEEeecCccccCCCCCCcccccc
Q 004218 25 KLPNLLGFNFCFNKFTGKIP--GSLHNLTNIQIIRMAHNLLEGT--VPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITS 100 (767)
Q Consensus 25 ~l~~L~~L~l~~n~l~~~~~--~~l~~l~~L~~L~l~~n~i~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 100 (767)
.+.+|++..|+++.+. ..+ +....+++++.||||+|-+... +..-...|++|+.|+|+.|.+........
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~----- 192 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT----- 192 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc-----
Confidence 5778888899988887 344 4678899999999999988752 23445668899999999998764321110
Q ss_pred ccCCCCCCEEECcCCcceeec-CchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccC-ccccCCCC
Q 004218 101 LTNSTRLNFLAFDGNQFEGEI-PESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEI-LTEIGQLQ 178 (767)
Q Consensus 101 l~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~-~~~~~~l~ 178 (767)
-..++.|+.|.|+.|.++..- ...+..++. |+.|+|..|...........-+..|+.|||++|++-... ....+.++
T Consensus 193 ~~~l~~lK~L~l~~CGls~k~V~~~~~~fPs-l~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 193 TLLLSHLKQLVLNSCGLSWKDVQWILLTFPS-LEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred hhhhhhhheEEeccCCCCHHHHHHHHHhCCc-HHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 114678899999999987332 222334565 999999999533344444555788999999999887432 14567789
Q ss_pred CCCEEEccCCccccc-cCcC-----cccCCCCceeeCCCCcCCCC-CcccccCccccccccccCcccCC
Q 004218 179 ELQSLDLAGNQISGS-IPNT-----LGNLKKLNQIDLSGNELASE-IPTSFGNFQNLLSIDLSNNKLNG 240 (767)
Q Consensus 179 ~L~~L~L~~n~i~~~-~~~~-----~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~n~l~~ 240 (767)
.|+.|+++.|.|..+ .|+. ...+++|++|+++.|++... .-..+..+++|+.|....|.++.
T Consensus 272 ~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 272 GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 999999999998842 2322 35678999999999999521 12345567888999999998874
No 476
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.18 E-value=1.5e-11 Score=113.24 Aligned_cols=123 Identities=26% Similarity=0.345 Sum_probs=34.5
Q ss_pred CCcEEEccCCcccccCCcccc-CCCCCCEEEcccccCcccCCccCCCCCCCcEEeecCccccCCCCCCccccccc-cCCC
Q 004218 28 NLLGFNFCFNKFTGKIPGSLH-NLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNKIVGSGDEGLSFITSL-TNST 105 (767)
Q Consensus 28 ~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l-~~l~ 105 (767)
.+++|+|++|.|. .+. .++ .+.+|+.|+|++|.|+ .+. .+..++.|++|++++|.|++. ...+ ..++
T Consensus 20 ~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i-------~~~l~~~lp 88 (175)
T PF14580_consen 20 KLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSI-------SEGLDKNLP 88 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--------CHHHHHH-T
T ss_pred ccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCcc-------ccchHHhCC
Confidence 4555666666655 232 233 3555666666666655 222 355555566666666655432 1122 2345
Q ss_pred CCCEEECcCCcceeec-CchhhhhccccCeEEccCCcccccC---CccccCCCCCCEEECc
Q 004218 106 RLNFLAFDGNQFEGEI-PESIGNLSNVLSKLYMGGNRFYGKI---PTSIGRLRSLTLLNLS 162 (767)
Q Consensus 106 ~L~~L~l~~n~l~~~~-~~~~~~l~~~L~~L~l~~n~i~~~~---~~~l~~l~~L~~L~l~ 162 (767)
+|+.|++++|+|...- -..+..+++ |+.|+|.+|.+.... .-.+..+++|+.||-.
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~-L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPK-LRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT---EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCC-cceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 5666666666554221 133444555 666666666655210 1124567777777743
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.18 E-value=1.5e-11 Score=113.14 Aligned_cols=119 Identities=25% Similarity=0.399 Sum_probs=31.5
Q ss_pred cCCcccccCCccccCCCCCCEEEcccccCcccCCccCC-CCCCCcEEeecCccccCCCCCCccccccccCCCCCCEEECc
Q 004218 35 CFNKFTGKIPGSLHNLTNIQIIRMAHNLLEGTVPPGLG-NLPFLKMYNIGFNKIVGSGDEGLSFITSLTNSTRLNFLAFD 113 (767)
Q Consensus 35 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~~L~~L~l~ 113 (767)
..+.|. .+|. +.+..++++|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+.. ..+..+++|++|+++
T Consensus 5 t~~~i~-~~~~-~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--------~~l~~L~~L~~L~L~ 72 (175)
T PF14580_consen 5 TANMIE-QIAQ-YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--------EGLPGLPRLKTLDLS 72 (175)
T ss_dssp -----------------------------------S--TT-TT--EEE-TTS--S----------TT----TT--EEE--
T ss_pred cccccc-cccc-cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--------cCccChhhhhhcccC
Confidence 344444 3443 455567788888888887 332 454 467788888888887532 345666777777777
Q ss_pred CCcceeecCchhh-hhccccCeEEccCCccccc-CCccccCCCCCCEEECcCCcCc
Q 004218 114 GNQFEGEIPESIG-NLSNVLSKLYMGGNRFYGK-IPTSIGRLRSLTLLNLSYNSIS 167 (767)
Q Consensus 114 ~n~l~~~~~~~~~-~l~~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~l~~n~i~ 167 (767)
+|+++ .+++.+. .+++ |++|++++|+|... .-..+..+++|++|+|.+|.+.
T Consensus 73 ~N~I~-~i~~~l~~~lp~-L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 73 NNRIS-SISEGLDKNLPN-LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp SS----S-CHHHHHH-TT---EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCCCC-ccccchHHhCCc-CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 77777 3444443 4555 77777777776531 1133445556666666666555
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.15 E-value=6.7e-12 Score=135.71 Aligned_cols=235 Identities=30% Similarity=0.356 Sum_probs=122.4
Q ss_pred cCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCcCcccCCCCceeeCCC
Q 004218 132 LSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPNTLGNLKKLNQIDLSG 211 (767)
Q Consensus 132 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 211 (767)
++.+++..|.+.. .-..+..+++|+.|++.+|.|..+ ...+..+++|++|++++|+|+.+. .+..++.|+.|++++
T Consensus 74 l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 74 LKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSG 149 (414)
T ss_pred HHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhheecc
Confidence 4445555555542 223345555555555555555531 222455555666666666655332 244455556666666
Q ss_pred CcCCCCCcccccCccccccccccCcccCCCCChh-hcccccccceeecccccCCCCCchhhcCCCceeEEEccCCCCCCC
Q 004218 212 NELASEIPTSFGNFQNLLSIDLSNNKLNGNIPKE-ILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNVVTIDLSANGLSGN 290 (767)
Q Consensus 212 N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L~~L~ls~n~l~~~ 290 (767)
|.|+. ...+..++.|+.+++++|.+...-+ . ...+..+..+ .+.+|.+... ..+..+..+..+++..|.++..
T Consensus 150 N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l-~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 150 NLISD--ISGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEEL-DLGGNSIREI--EGLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred Ccchh--ccCCccchhhhcccCCcchhhhhhh-hhhhhccchHHH-hccCCchhcc--cchHHHHHHHHhhcccccceec
Confidence 66542 2334445556666666665552222 1 2333333222 5555555422 2233334445556777776633
Q ss_pred CCcccccCc--ccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCCCccccccccCceEeccCCcCcCcC---CC
Q 004218 291 LPNSFKNCK--SLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSIPSDLQNLRALRSLNLTFNNLEGVV---PR 365 (767)
Q Consensus 291 ~~~~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~---~~ 365 (767)
.+ +..+. .|+.+++++|++.. .+..+..+..+..|++++|++... ..+...+.+..+....|.+.... ..
T Consensus 224 ~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (414)
T KOG0531|consen 224 EG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQE 298 (414)
T ss_pred cC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcc
Confidence 22 22222 37778888887773 335566677788888888887632 23445566667777777765321 11
Q ss_pred --CccccccccccccCCc
Q 004218 366 --EGIFRHTSMVHLEGNP 381 (767)
Q Consensus 366 --~~~~~~~~~~~l~~Np 381 (767)
....+.+..+.+.+||
T Consensus 299 ~~~~~~~~~~~~~~~~~~ 316 (414)
T KOG0531|consen 299 YITSAAPTLVTLTLELNP 316 (414)
T ss_pred ccccccccccccccccCc
Confidence 1234455556666665
No 479
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.14 E-value=7.4e-12 Score=135.39 Aligned_cols=86 Identities=28% Similarity=0.311 Sum_probs=56.4
Q ss_pred ceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCC---CCcc-ccccccCce
Q 004218 276 NVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGS---IPSD-LQNLRALRS 351 (767)
Q Consensus 276 ~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~-~~~l~~L~~ 351 (767)
+|+.+++++|.+. ..+..+..+..+..|++.+|++... ..+...+.+..+.++.|.+... .... ....+.+..
T Consensus 233 ~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (414)
T KOG0531|consen 233 HLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVT 309 (414)
T ss_pred HHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccc
Confidence 3677777777776 3335666777788888888877632 2244555677777777776521 1111 456678888
Q ss_pred EeccCCcCcCcCC
Q 004218 352 LNLTFNNLEGVVP 364 (767)
Q Consensus 352 L~l~~N~l~~~~~ 364 (767)
+.+.+|+.....+
T Consensus 310 ~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 310 LTLELNPIRKISS 322 (414)
T ss_pred cccccCccccccc
Confidence 8888888877554
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.11 E-value=7.3e-10 Score=109.70 Aligned_cols=145 Identities=21% Similarity=0.186 Sum_probs=110.0
Q ss_pred CccccccceEEEEEEeCCCcEEEEEEeeccCC-cchhhHHHHHHHHhcCCC--CCceeEEeeeecCCcccceeeEEEEee
Q 004218 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIEST-GTWKSFFAECEALRNTRH--RNLVKLITSCSSLDFKNMEFLALVYEF 537 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e~ 537 (767)
+.++.|.++.||++...+|+.+++|....... .....+.+|+++++.+.+ ..+.+++.+..... ..+..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEEE
Confidence 56899999999999987678999998754322 235678899999999965 34567777643321 12345899999
Q ss_pred cCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 004218 538 LGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDC----------------------------------- 582 (767)
Q Consensus 538 ~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------- 582 (767)
++|.++.+.+.. ..++..+...++.++++++++||+..
T Consensus 82 i~G~~l~~~~~~-------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 82 VDGRVLRDRLLR-------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred eCCEecCCCCCC-------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 999888876532 12677788888899999999998531
Q ss_pred ------------------CCCeEeecCCCCCeeeCC--CCceEEccccchhh
Q 004218 583 ------------------EVPIVHCDLKPGNILLDE--DMTAKVGDFGLARS 614 (767)
Q Consensus 583 ------------------~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg~a~~ 614 (767)
+..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998853
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=1.1e-09 Score=98.65 Aligned_cols=128 Identities=23% Similarity=0.277 Sum_probs=94.5
Q ss_pred CccccccceEEEEEEeCCCcEEEEEEeeccC---Cc-----chhhHHHHHHHHhcCCC--CCceeEEeeeecCCccccee
Q 004218 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIES---TG-----TWKSFFAECEALRNTRH--RNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~-----~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~ 530 (767)
..+++|+-+.+|.+.+. |.++++|.-.+.. +. ...+-.+|++++.+++- -+...++++ +...
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~~ 73 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPDN 73 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCCC
Confidence 46789999999999875 5567777642221 11 12345689999988753 333444544 2223
Q ss_pred eEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEcccc
Q 004218 531 LALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFG 610 (767)
Q Consensus 531 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 610 (767)
..|+|||++|..|.+++... ...++..+-.-+.-||.. ||||+|+.++||++..+. +.++|||
T Consensus 74 ~~I~me~I~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 74 GLIVMEYIEGELLKDALEEA-------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred CEEEEEEeCChhHHHHHHhc-------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECC
Confidence 37999999999999888653 134677777888899999 999999999999998765 9999999
Q ss_pred chh
Q 004218 611 LAR 613 (767)
Q Consensus 611 ~a~ 613 (767)
++.
T Consensus 137 Lg~ 139 (204)
T COG3642 137 LGE 139 (204)
T ss_pred ccc
Confidence 996
No 482
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.05 E-value=6.8e-11 Score=131.24 Aligned_cols=211 Identities=26% Similarity=0.337 Sum_probs=146.3
Q ss_pred HHhcCCCCCCccccccceEEEEEEeCC-CcEEEEEEeecc---CCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccc
Q 004218 452 RATGNFSHENLIGSGSFGSVYKGYLRE-GISVAVKVLDIE---STGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKN 527 (767)
Q Consensus 452 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 527 (767)
...+.+.+.+.+.+|.++.++.+.-.. |...+.|+.... ...+.+....+-.+.-...+|-++..... +..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCC
Confidence 345567777788999999999887442 433444433211 12223333333333333345655554433 344
Q ss_pred ceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEc
Q 004218 528 MEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVG 607 (767)
Q Consensus 528 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~ 607 (767)
....+++++|..+++|...++.... .+..-+......+..+.+|||.. .+.|+|++|.|.+...++..+++
T Consensus 876 rsP~~L~~~~~~~~~~~Skl~~~~~------~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~ 946 (1205)
T KOG0606|consen 876 RSPLPLVGHYLNGGDLPSKLHNSGC------LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLT 946 (1205)
T ss_pred CCCcchhhHHhccCCchhhhhcCCC------cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccC
Confidence 5566999999999999999887653 44444555667788899999997 79999999999999999999999
Q ss_pred cccchhhhhhhcC-----------------------CCcc--ccccccccCCCCccCccccCCCCCCCcccchhhhHHHH
Q 004218 608 DFGLARSLLERIG-----------------------NQSS--ISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLL 662 (767)
Q Consensus 608 Dfg~a~~~~~~~~-----------------------~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~ 662 (767)
|||.....+-... .... ........||+.|.|||...+.....++|+|+.|++++
T Consensus 947 ~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~ 1026 (1205)
T KOG0606|consen 947 DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLF 1026 (1205)
T ss_pred ccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhh
Confidence 9984332211100 0000 01124466899999999999999999999999999999
Q ss_pred HHHhCCCCCCCccc
Q 004218 663 EIFTGMSPTHESFA 676 (767)
Q Consensus 663 el~tg~~p~~~~~~ 676 (767)
|.++|.+||.....
T Consensus 1027 e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 1027 EVLTGIPPFNAETP 1040 (1205)
T ss_pred hhhcCCCCCCCcch
Confidence 99999999976544
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.03 E-value=2.2e-09 Score=96.05 Aligned_cols=142 Identities=24% Similarity=0.230 Sum_probs=99.5
Q ss_pred CCCccccccceEEEEEEeCCCcEEEEEEeeccC--------CcchhhHHHHHHHHhcCCCCCceeEEeeeecCCccccee
Q 004218 459 HENLIGSGSFGSVYKGYLREGISVAVKVLDIES--------TGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEF 530 (767)
Q Consensus 459 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 530 (767)
....+-+|+-+.|+++.+. |+.+.||.-.... .-..++..+|++.+.++.--.|.-..-++.+ ...
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D-----~~~ 84 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFID-----TYG 84 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEe-----cCC
Confidence 5678999999999999987 8888888542211 1123566789999988753333222112111 111
Q ss_pred eEEEEeecCC-CChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCC---ceEE
Q 004218 531 LALVYEFLGN-GSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKV 606 (767)
Q Consensus 531 ~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~---~~kl 606 (767)
-.++|||++| .++.+++...-.. .....-...++.+|-+.+.-||.. +|+||||..+||++..++ .+.+
T Consensus 85 ~~i~ME~~~g~~~vk~~i~~~~~~----~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~l 157 (229)
T KOG3087|consen 85 GQIYMEFIDGASTVKDFILSTMED----ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPIL 157 (229)
T ss_pred CeEEEEeccchhHHHHHHHHHccC----cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEE
Confidence 2799999977 5788888765432 122223367899999999999999 999999999999997554 4689
Q ss_pred ccccchh
Q 004218 607 GDFGLAR 613 (767)
Q Consensus 607 ~Dfg~a~ 613 (767)
+|||++.
T Consensus 158 Idfgls~ 164 (229)
T KOG3087|consen 158 IDFGLSS 164 (229)
T ss_pred Eeecchh
Confidence 9999985
No 484
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.03 E-value=1.8e-09 Score=101.23 Aligned_cols=124 Identities=27% Similarity=0.276 Sum_probs=82.4
Q ss_pred EEEEEEeCCCcEEEEEEeeccCC-------------c--------c-----hhhHHHHHHHHhcCCCC--CceeEEeeee
Q 004218 470 SVYKGYLREGISVAVKVLDIEST-------------G--------T-----WKSFFAECEALRNTRHR--NLVKLITSCS 521 (767)
Q Consensus 470 ~V~~~~~~~~~~vavK~~~~~~~-------------~--------~-----~~~~~~e~~~l~~l~h~--niv~~~~~~~ 521 (767)
.||.|...+|..+|||+.+.... . . .....+|.+.|.++... ++.+.+++..
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 48999998899999998743200 0 0 12356899999999655 5667766521
Q ss_pred cCCcccceeeEEEEeecC--CCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCCeEeecCCCCCeee
Q 004218 522 SLDFKNMEFLALVYEFLG--NGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDY-LHNDCEVPIVHCDLKPGNILL 598 (767)
Q Consensus 522 ~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~Dlkp~NIl~ 598 (767)
-.+||||++ |..+..+.... ++..+...++.+++..+.. +|+. ||+|||+.+.||++
T Consensus 81 ---------~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv 140 (188)
T PF01163_consen 81 ---------NVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILV 140 (188)
T ss_dssp ---------TEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEE
T ss_pred ---------CEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEe
Confidence 289999998 65555443322 1133456678888886666 4677 99999999999999
Q ss_pred CCCCceEEccccchhh
Q 004218 599 DEDMTAKVGDFGLARS 614 (767)
Q Consensus 599 ~~~~~~kl~Dfg~a~~ 614 (767)
+++ .+.|+|||.+..
T Consensus 141 ~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVD 155 (188)
T ss_dssp ETT-CEEE--GTTEEE
T ss_pred ecc-eEEEEecCccee
Confidence 987 899999998864
No 485
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=2.4e-10 Score=120.83 Aligned_cols=197 Identities=25% Similarity=0.209 Sum_probs=141.9
Q ss_pred HHHhcCCCCCCccccccceEEEEEEeC--CCcEEEEEEeeccCCcch--hhHHHHHHHHhcC-CCCCceeEEeeeecCCc
Q 004218 451 RRATGNFSHENLIGSGSFGSVYKGYLR--EGISVAVKVLDIESTGTW--KSFFAECEALRNT-RHRNLVKLITSCSSLDF 525 (767)
Q Consensus 451 ~~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~--~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 525 (767)
..-..+|..+..||.|.|+.|+....+ ++..|++|.......... ..-..|+.+...+ .|.+++..+..+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~---- 336 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS---- 336 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc----
Confidence 345668888999999999999998744 477899997743322222 2223455555555 4777777665532
Q ss_pred ccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCC-Cce
Q 004218 526 KNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDED-MTA 604 (767)
Q Consensus 526 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~-~~~ 604 (767)
.....++--|||++++......... .+++..++++..|++.++.++|+. .++|+|+||+||++..+ +..
T Consensus 337 -~~r~~~ip~e~~~~~s~~l~~~~~~------~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~ 406 (524)
T KOG0601|consen 337 -QLRQGYIPLEFCEGGSSSLRSVTSQ------MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFS 406 (524)
T ss_pred -ccccccCchhhhcCcchhhhhHHHH------hcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhh
Confidence 2333468889999998887663322 277788899999999999999998 99999999999999886 788
Q ss_pred EEccccchhhhhhhcCCCccccccccccCCCCcc--CccccCCCCCCCcccchhhhHHHHHHHhCCCC
Q 004218 605 KVGDFGLARSLLERIGNQSSISSTHVLKGSIGYI--PPEYGLGEKPSTAGDVYSFGVMLLEIFTGMSP 670 (767)
Q Consensus 605 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p 670 (767)
+++|||.+..+.-. . ....+.-++. +|+......+..+.|+||||..+.+..+|..-
T Consensus 407 ~~~~~~~~t~~~~~--------~-~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~l 465 (524)
T KOG0601|consen 407 KLGDFGCWTRLAFS--------S-GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPL 465 (524)
T ss_pred hcccccccccccee--------c-ccccccccccccchhhccccccccccccccccccccccccCccc
Confidence 99999998642111 0 1111223333 55555666788999999999999999998754
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.98 E-value=4e-10 Score=129.90 Aligned_cols=157 Identities=23% Similarity=0.347 Sum_probs=119.3
Q ss_pred CCccccCCCCCCEEEcccccCcccCCccCCCCCCCcEEeecCcc--ccCCCCCCccccccccCCCCCCEEECcCCcceee
Q 004218 43 IPGSLHNLTNIQIIRMAHNLLEGTVPPGLGNLPFLKMYNIGFNK--IVGSGDEGLSFITSLTNSTRLNFLAFDGNQFEGE 120 (767)
Q Consensus 43 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~--l~~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~ 120 (767)
.|. ..+....+...+-+|.+. .++.... .++|++|-+..|. +..+ ....+..++.|+.|||++|.=.+.
T Consensus 516 ~~~-~~~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~i------s~~ff~~m~~LrVLDLs~~~~l~~ 586 (889)
T KOG4658|consen 516 IPQ-VKSWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEI------SGEFFRSLPLLRVLDLSGNSSLSK 586 (889)
T ss_pred ccc-ccchhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhc------CHHHHhhCcceEEEECCCCCccCc
Confidence 443 344477889999999987 5555443 3589999999886 4321 122377899999999999977779
Q ss_pred cCchhhhhccccCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccc--cccCcCc
Q 004218 121 IPESIGNLSNVLSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQIS--GSIPNTL 198 (767)
Q Consensus 121 ~~~~~~~l~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~--~~~~~~~ 198 (767)
+|+.++++.+ |++|++++..+. .+|..+.+++.|.+|++..+.-....+.....+++|++|.+..-... ...-..+
T Consensus 587 LP~~I~~Li~-LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el 664 (889)
T KOG4658|consen 587 LPSSIGELVH-LRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKEL 664 (889)
T ss_pred CChHHhhhhh-hhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhh
Confidence 9999999998 999999999998 78999999999999999998876566778888999999999776532 1222233
Q ss_pred ccCCCCceeeCC
Q 004218 199 GNLKKLNQIDLS 210 (767)
Q Consensus 199 ~~l~~L~~L~L~ 210 (767)
.++.+|+.|...
T Consensus 665 ~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 665 ENLEHLENLSIT 676 (889)
T ss_pred hcccchhhheee
Confidence 445555555543
No 487
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=3e-08 Score=99.82 Aligned_cols=202 Identities=14% Similarity=0.124 Sum_probs=132.4
Q ss_pred CCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHHHHHHHHhcC-CCCCceeEEeeeec--CCcccceeeEEE
Q 004218 458 SHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFFAECEALRNT-RHRNLVKLITSCSS--LDFKNMEFLALV 534 (767)
Q Consensus 458 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--~~~~~~~~~~lv 534 (767)
...+.||+|+-+.+|..-. -...+.|++.........+ .+..|... .||-+-.-+.|=.. ..-..+..+.+.
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHHHH---HHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 3457799999999996532 1224567775443332222 22333333 56644331222100 001223347888
Q ss_pred EeecCCC-ChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 535 YEFLGNG-SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 535 ~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
|+.+.+. ...++.....+.+.-....|...+++++.++.+.+.||+. |.+-||+.++|+|+++++.+.|.|-....
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence 9888764 2333333222222233478999999999999999999999 99999999999999999999998875544
Q ss_pred hhhhhcCCCccccccccccCCCCccCccccC-----CCCCCCcccchhhhHHHHHHHhC-CCCCCCc
Q 004218 614 SLLERIGNQSSISSTHVLKGSIGYIPPEYGL-----GEKPSTAGDVYSFGVMLLEIFTG-MSPTHES 674 (767)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg-~~p~~~~ 674 (767)
... ......+.+|...|.+||.-. +-.-+...|-|.+|+++++++.| +.||...
T Consensus 166 i~~-------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI 225 (637)
T COG4248 166 INA-------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI 225 (637)
T ss_pred ecc-------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence 321 112234567899999999644 33346789999999999999887 8898654
No 488
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=1e-08 Score=105.89 Aligned_cols=176 Identities=19% Similarity=0.184 Sum_probs=133.0
Q ss_pred cceEEEEEEe-CCCcEEEEEEeeccCCcchhhHHHHHHHHhcCCCCCceeEEeeeecCCcccceeeEEEEeecCC-CChh
Q 004218 467 SFGSVYKGYL-REGISVAVKVLDIESTGTWKSFFAECEALRNTRHRNLVKLITSCSSLDFKNMEFLALVYEFLGN-GSLG 544 (767)
Q Consensus 467 ~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 544 (767)
...+.|++.. .+|..|++|++.............-+++++++.|+|+|++.+++....+ .+..+++||+|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 3467899984 5799999999954433333334466889999999999999998764444 35567899999987 6787
Q ss_pred hhhcccCCC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhh
Q 004218 545 DWIHGERKN---------EHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSL 615 (767)
Q Consensus 545 ~~l~~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 615 (767)
+........ ..+...++...|.++.|+..||.++|+. |..-+-+.|.+|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 765433221 2345688999999999999999999999 9999999999999999999999988887554
Q ss_pred hhhcCCCccccccccccCCCCccCccccCCCCCCCcccchhhhHHHHHHHhCCC
Q 004218 616 LERIGNQSSISSTHVLKGSIGYIPPEYGLGEKPSTAGDVYSFGVMLLEIFTGMS 669 (767)
Q Consensus 616 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~ 669 (767)
..+. . |-+. --.+-|.=.+|.+++.+.||..
T Consensus 444 ~~d~------------------~--~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDP------------------T--EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCC------------------C--cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 3321 0 1111 1235789999999999999954
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.92 E-value=8e-10 Score=83.53 Aligned_cols=61 Identities=34% Similarity=0.497 Sum_probs=43.8
Q ss_pred CCccEEeCCCCeeeecCCCccccCCCCCcEEEccCCcccccCCccccCCCCCCEEEcccccC
Q 004218 2 TSLVYLGLASNQLWGEIPYDVGDKLPNLLGFNFCFNKFTGKIPGSLHNLTNIQIIRMAHNLL 63 (767)
Q Consensus 2 ~~L~~L~l~~n~l~~~ip~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i 63 (767)
++|++|+|++|+++ .+|...|..+++|++|++++|.+....|++|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 45677777777776 77777777777777777777777766666777777777777777764
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.91 E-value=5.9e-09 Score=99.83 Aligned_cols=147 Identities=26% Similarity=0.183 Sum_probs=105.2
Q ss_pred ccCHHHHHHHhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccC-----------------Cc-----chhhHHHH
Q 004218 444 MISYDELRRATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIES-----------------TG-----TWKSFFAE 501 (767)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----------------~~-----~~~~~~~e 501 (767)
.+....+..-..=+.+...||-|--+.||.|...+|.++|||.-+... .. ......+|
T Consensus 80 ~LAL~~l~~r~~ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rE 159 (304)
T COG0478 80 ALALHALVKRGIVEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAERE 159 (304)
T ss_pred HHHHHHHHHcChHHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHH
Confidence 333444444444456778999999999999999999999999753210 00 12346789
Q ss_pred HHHHhcCCCC--CceeEEeeeecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004218 502 CEALRNTRHR--NLVKLITSCSSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLH 579 (767)
Q Consensus 502 ~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 579 (767)
.++|.++... .+.+.+++ +...+||||++|-.|...- ++......++..|++-+..+-
T Consensus 160 f~~L~~L~~~G~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----------~~~en~~~il~~il~~~~~~~ 219 (304)
T COG0478 160 FEALQRLYPEGVKVPKPIAW---------NRHAVVMEYIEGVELYRLR-----------LDVENPDEILDKILEEVRKAY 219 (304)
T ss_pred HHHHHHhhhcCCCCCCcccc---------ccceeeeehcccceeeccc-----------CcccCHHHHHHHHHHHHHHHH
Confidence 9999998654 67776665 3348999999986655432 223344455666666666665
Q ss_pred hCCCCCeEeecCCCCCeeeCCCCceEEccccchh
Q 004218 580 NDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLAR 613 (767)
Q Consensus 580 ~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 613 (767)
.. ||||||+.+-||+++++|.+.++||-.+.
T Consensus 220 ~~---GiVHGDlSefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 220 RR---GIVHGDLSEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred Hc---CccccCCchheEEEecCCCEEEEeCcccc
Confidence 66 99999999999999999999999996664
No 491
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.91 E-value=2.1e-08 Score=100.25 Aligned_cols=145 Identities=17% Similarity=0.023 Sum_probs=98.1
Q ss_pred CccccccceEEEEEEeCCCcEEEEEEeeccCCc-----------chhhHHHHHHHHhcCCCC--CceeEEeeeecCCccc
Q 004218 461 NLIGSGSFGSVYKGYLREGISVAVKVLDIESTG-----------TWKSFFAECEALRNTRHR--NLVKLITSCSSLDFKN 527 (767)
Q Consensus 461 ~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~ 527 (767)
+.+-......|+++... |+.|.||........ ....+.+|.+.+.++... ..++.+++........
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 34444444557777664 788999977432210 111377888888777322 2334444432211111
Q ss_pred ceeeEEEEeecCCC-ChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC------
Q 004218 528 MEFLALVYEFLGNG-SLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE------ 600 (767)
Q Consensus 528 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~------ 600 (767)
....++|||++++. +|.+++..... ...+...+..++.+++..+.-||.. ||+|+|+++.||+++.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCC
Confidence 23458999999885 89999853211 1255677789999999999999999 9999999999999975
Q ss_pred -CCceEEccccchh
Q 004218 601 -DMTAKVGDFGLAR 613 (767)
Q Consensus 601 -~~~~kl~Dfg~a~ 613 (767)
++.+.++||+.+.
T Consensus 180 ~~~~~~LIDl~r~~ 193 (268)
T PRK15123 180 EDLKLSVIDLHRAQ 193 (268)
T ss_pred CCceEEEEECCccc
Confidence 4689999999885
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.86 E-value=1.6e-09 Score=81.94 Aligned_cols=61 Identities=39% Similarity=0.570 Sum_probs=36.4
Q ss_pred CceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCccc
Q 004218 275 GNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKL 335 (767)
Q Consensus 275 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (767)
++|+.|++++|+++.+.+..|.++++|++|++++|.++...+..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3556666666666655555666666666666666666555555566666666666666553
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.83 E-value=1.3e-10 Score=123.43 Aligned_cols=89 Identities=34% Similarity=0.273 Sum_probs=39.1
Q ss_pred hhcCCCceeEEEccCCCCCCCCCcccccCcccceeeccCccccCCCCchhhccCCceEEEcCCcccCCCC-Ccccccccc
Q 004218 270 EIGMLGNVVTIDLSANGLSGNLPNSFKNCKSLEKLLMANNKFSGPIPNILAELKGLEVLDLSSNKLSGSI-PSDLQNLRA 348 (767)
Q Consensus 270 ~~~~l~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~ 348 (767)
.+..+++|++|||++|.+..+.--...++. |+.|.+++|.++.. ..+.++.+|+.||+++|-|.+.- -..+..+..
T Consensus 204 ~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~ 280 (1096)
T KOG1859|consen 204 NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSS 280 (1096)
T ss_pred HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHH
Confidence 344455555555555555422222222332 55555555555421 12344445555555555544211 111334444
Q ss_pred CceEeccCCcCcC
Q 004218 349 LRSLNLTFNNLEG 361 (767)
Q Consensus 349 L~~L~l~~N~l~~ 361 (767)
|+.|+|.||++.+
T Consensus 281 L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 281 LIVLWLEGNPLCC 293 (1096)
T ss_pred HHHHhhcCCcccc
Confidence 5555555555543
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=1.9e-09 Score=102.94 Aligned_cols=189 Identities=25% Similarity=0.283 Sum_probs=107.6
Q ss_pred hhhhccccCeEEccCCcccc--cCCccccCCCCCCEEECcCCcCcccCcccc-CCCCCCCEEEccCCccc-cccCcCccc
Q 004218 125 IGNLSNVLSKLYMGGNRFYG--KIPTSIGRLRSLTLLNLSYNSISGEILTEI-GQLQELQSLDLAGNQIS-GSIPNTLGN 200 (767)
Q Consensus 125 ~~~l~~~L~~L~l~~n~i~~--~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~n~i~-~~~~~~~~~ 200 (767)
++.....+++|||.+|.|+. .+...+.+|+.|++|+|+.|.+...+ +.+ ..+.+|++|-|.+..+. ......+..
T Consensus 66 ~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I-~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~ 144 (418)
T KOG2982|consen 66 FGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDI-KSLPLPLKNLRVLVLNGTGLSWTQSTSSLDD 144 (418)
T ss_pred HHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCcc-ccCcccccceEEEEEcCCCCChhhhhhhhhc
Confidence 34443447778888887762 34445677888888888888887432 233 46678888888887776 233345567
Q ss_pred CCCCceeeCCCCcCCCC--CcccccC-ccccccccccCcccCCCCChhhcccccccceeecccccCCCCCchhhcCCCce
Q 004218 201 LKKLNQIDLSGNELASE--IPTSFGN-FQNLLSIDLSNNKLNGNIPKEILSLSSLTTIVNLSKNFLDGTLPEEIGMLGNV 277 (767)
Q Consensus 201 l~~L~~L~L~~N~l~~~--~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~l~~~l~l~~n~l~~~~~~~~~~l~~L 277 (767)
++.+++|++|.|.+... ..+.... -+.+++|.+..|... +++..|++. .-++++
T Consensus 145 lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~----------------~w~~~~~l~-------r~Fpnv 201 (418)
T KOG2982|consen 145 LPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQ----------------LWLNKNKLS-------RIFPNV 201 (418)
T ss_pred chhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHH----------------HHHHHHhHH-------hhcccc
Confidence 77778888887744321 1111111 124444444444322 123333333 235667
Q ss_pred eEEEccCCCCCCCC-CcccccCcccceeeccCccccCC-CCchhhccCCceEEEcCCcccCC
Q 004218 278 VTIDLSANGLSGNL-PNSFKNCKSLEKLLMANNKFSGP-IPNILAELKGLEVLDLSSNKLSG 337 (767)
Q Consensus 278 ~~L~ls~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~ 337 (767)
..+.+..|.+.+.. ...+..++.+.-|+|+.|+|..- ..+.+.+++.|..|.+++|++.+
T Consensus 202 ~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 202 NSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred hheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 77777777665322 23344555666666666666531 22455566666666666666653
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.77 E-value=1.4e-07 Score=88.77 Aligned_cols=143 Identities=15% Similarity=0.071 Sum_probs=104.9
Q ss_pred cccccceEEEEEEeCCCcEEEEEEeeccC------CcchhhHHHHHHHHhcCCC--CCceeEEeeeecCCcccceeeEEE
Q 004218 463 IGSGSFGSVYKGYLREGISVAVKVLDIES------TGTWKSFFAECEALRNTRH--RNLVKLITSCSSLDFKNMEFLALV 534 (767)
Q Consensus 463 lg~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv 534 (767)
-|+||.+.|+..... |..+-+|.-.... +-....|.+|...++++.. -.+.+.+ ++........-..+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467899999998776 5578888764211 3355789999999988842 2244444 3322212233456899
Q ss_pred EeecCC-CChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCc--eEEccccc
Q 004218 535 YEFLGN-GSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMT--AKVGDFGL 611 (767)
Q Consensus 535 ~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~--~kl~Dfg~ 611 (767)
+|-+++ .||.+++..... .+.+......+..+++..++-||+. |+.|+|+.+.||+++.++. ++++||.-
T Consensus 104 Te~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 998764 589888865331 2367778889999999999999999 9999999999999986666 99999987
Q ss_pred hhh
Q 004218 612 ARS 614 (767)
Q Consensus 612 a~~ 614 (767)
++.
T Consensus 177 ~r~ 179 (216)
T PRK09902 177 SRR 179 (216)
T ss_pred cch
Confidence 754
No 496
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.75 E-value=7.8e-10 Score=104.18 Aligned_cols=235 Identities=17% Similarity=0.168 Sum_probs=137.0
Q ss_pred CCCccEEeCCCCeeeec----CCCccccCCCCCcEEEccCCcc---cccC-------CccccCCCCCCEEEcccccCccc
Q 004218 1 MTSLVYLGLASNQLWGE----IPYDVGDKLPNLLGFNFCFNKF---TGKI-------PGSLHNLTNIQIIRMAHNLLEGT 66 (767)
Q Consensus 1 l~~L~~L~l~~n~l~~~----ip~~~~~~l~~L~~L~l~~n~l---~~~~-------~~~l~~l~~L~~L~l~~n~i~~~ 66 (767)
|..++++|||+|.|.++ +...+. .-.+|+..+++.--. .+.+ ...+-++++|+..+||.|.++..
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia-~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~ 107 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIA-NVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSE 107 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHh-hhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCcc
Confidence 45688899999988743 222333 255677777765422 2222 24567888999999999988765
Q ss_pred CCc----cCCCCCCCcEEeecCccccCCCCCCcccccccc---------CCCCCCEEECcCCcceeecCchhhhh----c
Q 004218 67 VPP----GLGNLPFLKMYNIGFNKIVGSGDEGLSFITSLT---------NSTRLNFLAFDGNQFEGEIPESIGNL----S 129 (767)
Q Consensus 67 ~~~----~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~---------~l~~L~~L~l~~n~l~~~~~~~~~~l----~ 129 (767)
.|+ .++.-..|.+|.|++|.+. |..+-.+..++. +-+.|+...+..|++. ..|...+.. -
T Consensus 108 ~~e~L~d~is~~t~l~HL~l~NnGlG--p~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle-ngs~~~~a~~l~sh 184 (388)
T COG5238 108 FPEELGDLISSSTDLVHLKLNNNGLG--PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE-NGSKELSAALLESH 184 (388)
T ss_pred cchHHHHHHhcCCCceeEEeecCCCC--ccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc-cCcHHHHHHHHHhh
Confidence 554 4555688889999888763 333333433222 3367777778887776 334333321 1
Q ss_pred cccCeEEccCCcccccC-----CccccCCCCCCEEECcCCcCccc----CccccCCCCCCCEEEccCCccccccCcCc--
Q 004218 130 NVLSKLYMGGNRFYGKI-----PTSIGRLRSLTLLNLSYNSISGE----ILTEIGQLQELQSLDLAGNQISGSIPNTL-- 198 (767)
Q Consensus 130 ~~L~~L~l~~n~i~~~~-----~~~l~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~-- 198 (767)
..|+++.+..|.|.... .-.+..+.+|++|||++|-++.. +..++...+.|+.|.+..|-++......+
T Consensus 185 ~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~lnDClls~~G~~~v~~ 264 (388)
T COG5238 185 ENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLNDCLLSNEGVKSVLR 264 (388)
T ss_pred cCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccccchhhccccHHHHHH
Confidence 12677777777765221 11234566777777777776632 22344556667777777776663332221
Q ss_pred --c--cCCCCceeeCCCCcCCCCCccc-----c--cCccccccccccCcccC
Q 004218 199 --G--NLKKLNQIDLSGNELASEIPTS-----F--GNFQNLLSIDLSNNKLN 239 (767)
Q Consensus 199 --~--~l~~L~~L~L~~N~l~~~~~~~-----~--~~l~~L~~L~l~~n~l~ 239 (767)
. ..++|..|-..+|.+.+..-.. | ..++-|..|.+.+|++.
T Consensus 265 ~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 265 RFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred HhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 1 2356666666666655321111 1 24555666666666655
No 497
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.68 E-value=1.9e-07 Score=88.04 Aligned_cols=142 Identities=17% Similarity=0.160 Sum_probs=97.1
Q ss_pred HhcCCCCCCccccccceEEEEEEeCCCcEEEEEEeeccCCcchhhHH---------HHHHHHhcC---CCCCceeEEeee
Q 004218 453 ATGNFSHENLIGSGSFGSVYKGYLREGISVAVKVLDIESTGTWKSFF---------AECEALRNT---RHRNLVKLITSC 520 (767)
Q Consensus 453 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~---------~e~~~l~~l---~h~niv~~~~~~ 520 (767)
..++|...+++-......|.+.... |+.+++|.........++.|. +++..+.++ .-.....++.++
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEID-GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 4678888888888887778777765 789999988654433333222 233333333 333444444444
Q ss_pred ecCCcccceeeEEEEeecCCCChhhhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeecCCCCCeeeCC
Q 004218 521 SSLDFKNMEFLALVYEFLGNGSLGDWIHGERKNEHGNGLNFLERLNIAIDIASALDYLHNDCEVPIVHCDLKPGNILLDE 600 (767)
Q Consensus 521 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~ 600 (767)
....+.-....+++|||++|..|.++.. +++ .++..+.+++.-+|+. |++|+|.+|.|+++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~----------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED----------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSN 170 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh----------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEEC
Confidence 3333333455679999999988876642 222 2456778889999999 9999999999999986
Q ss_pred CCceEEccccchh
Q 004218 601 DMTAKVGDFGLAR 613 (767)
Q Consensus 601 ~~~~kl~Dfg~a~ 613 (767)
++ ++++||+..+
T Consensus 171 ~~-i~iID~~~k~ 182 (229)
T PF06176_consen 171 NG-IRIIDTQGKR 182 (229)
T ss_pred Cc-EEEEECcccc
Confidence 55 9999997764
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.66 E-value=2e-07 Score=90.26 Aligned_cols=110 Identities=23% Similarity=0.168 Sum_probs=82.7
Q ss_pred hhhHHHHHHHHhcCC--CCCceeEEeeeecCCcccceeeEEEEeecCC-CChhhhhcccCCCCCCCCCCHHHHHHHHHHH
Q 004218 495 WKSFFAECEALRNTR--HRNLVKLITSCSSLDFKNMEFLALVYEFLGN-GSLGDWIHGERKNEHGNGLNFLERLNIAIDI 571 (767)
Q Consensus 495 ~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~l~~~~~~~i~~~i 571 (767)
.....+|.+.+..+. .-.+.+.+++........ ...++|+|++++ .+|.+++..... .+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~-~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGG-YRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCc-eeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHHHH
Confidence 345777888777663 223455555543322122 456899999988 479999876332 5566778899999
Q ss_pred HHHHHHHHhCCCCCeEeecCCCCCeeeCCCC---ceEEccccchhh
Q 004218 572 ASALDYLHNDCEVPIVHCDLKPGNILLDEDM---TAKVGDFGLARS 614 (767)
Q Consensus 572 ~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~a~~ 614 (767)
+..++-||.. ||+|+|+++.|||++.++ .+.++||+-++.
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999 999999999999999887 899999988754
No 499
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.66 E-value=2.8e-10 Score=120.97 Aligned_cols=101 Identities=30% Similarity=0.429 Sum_probs=56.0
Q ss_pred cCeEEccCCcccccCCccccCCCCCCEEECcCCcCcccCccccCCCCCCCEEEccCCccccccCc-CcccCCCCceeeCC
Q 004218 132 LSKLYMGGNRFYGKIPTSIGRLRSLTLLNLSYNSISGEILTEIGQLQELQSLDLAGNQISGSIPN-TLGNLKKLNQIDLS 210 (767)
Q Consensus 132 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~L~~L~L~ 210 (767)
|...+++.|++. .+..++.-++.|+.|+|++|+++. ...+..++.|++|||++|++. .+|. ....+. |..|.|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~--v~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK--VDNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh--hHHHHhcccccccccccchhc-cccccchhhhh-heeeeec
Confidence 445556666665 455555556666666666666654 225556666666666666665 3332 122222 6666666
Q ss_pred CCcCCCCCcccccCccccccccccCcccC
Q 004218 211 GNELASEIPTSFGNFQNLLSIDLSNNKLN 239 (767)
Q Consensus 211 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 239 (767)
+|.++.. ..+.++.+|+.||+++|-|.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~ 267 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLS 267 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhh
Confidence 6666522 33455666666666666555
No 500
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.64 E-value=1.2e-08 Score=109.51 Aligned_cols=100 Identities=25% Similarity=0.467 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHhCCCCCeEeecCCCCCeeeCCCCceEEccccchhhhhhhcCCCcccc---ccccccCCCCccCccccCC
Q 004218 569 IDIASALDYLHNDCEVPIVHCDLKPGNILLDEDMTAKVGDFGLARSLLERIGNQSSIS---STHVLKGSIGYIPPEYGLG 645 (767)
Q Consensus 569 ~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~ 645 (767)
.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+++.............+ ......-...|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3445899999987 4999999999999999999999999999876544221111111 1111224567999999999
Q ss_pred CCCCCcccchhhhHHHHHHHhCCCC
Q 004218 646 EKPSTAGDVYSFGVMLLEIFTGMSP 670 (767)
Q Consensus 646 ~~~~~~~Dv~slG~il~el~tg~~p 670 (767)
...+.++|+||+|+.+|.+..|..+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~ 208 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKS 208 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcc
Confidence 8889999999999999999954443
Done!