Query 004220
Match_columns 767
No_of_seqs 499 out of 4009
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 18:06:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 2.7E-74 9.1E-79 676.6 42.1 560 87-763 6-626 (632)
2 1ots_A Voltage-gated CLC-type 100.0 9.3E-63 3.2E-67 557.1 43.2 417 88-564 32-450 (465)
3 3nd0_A SLL0855 protein; CLC fa 100.0 1.9E-62 6.5E-67 552.7 41.0 416 86-563 26-441 (466)
4 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 6.3E-62 2.2E-66 547.1 44.4 415 87-563 16-434 (446)
5 3org_A CMCLC; transporter, tra 99.8 7.5E-19 2.6E-23 206.2 19.3 191 348-551 9-210 (632)
6 4esy_A CBS domain containing m 99.8 7.4E-19 2.5E-23 171.7 12.1 133 619-763 13-163 (170)
7 3k6e_A CBS domain protein; str 99.7 4.7E-18 1.6E-22 164.0 12.2 128 623-763 14-143 (156)
8 3lv9_A Putative transporter; C 99.7 1.7E-17 5.9E-22 157.8 15.6 124 620-762 19-145 (148)
9 3i8n_A Uncharacterized protein 99.7 2E-17 6.9E-22 153.9 12.6 124 621-762 3-129 (130)
10 3kpb_A Uncharacterized protein 99.7 3.1E-17 1.1E-21 150.3 13.6 121 624-763 1-121 (122)
11 3nqr_A Magnesium and cobalt ef 99.7 1.3E-17 4.6E-22 154.4 11.2 122 623-762 2-126 (127)
12 2ef7_A Hypothetical protein ST 99.7 4.3E-17 1.5E-21 151.8 13.8 125 622-763 2-126 (133)
13 3hf7_A Uncharacterized CBS-dom 99.7 3.2E-17 1.1E-21 152.7 12.8 124 623-762 1-127 (130)
14 3jtf_A Magnesium and cobalt ef 99.7 3.9E-17 1.3E-21 151.8 12.4 121 622-762 3-126 (129)
15 2p9m_A Hypothetical protein MJ 99.7 7.6E-17 2.6E-21 151.0 14.1 128 619-762 3-136 (138)
16 3gby_A Uncharacterized protein 99.7 2.8E-17 9.5E-22 152.4 10.8 124 622-762 3-126 (128)
17 3lhh_A CBS domain protein; str 99.7 9.1E-17 3.1E-21 157.2 14.7 125 620-763 38-165 (172)
18 3lfr_A Putative metal ION tran 99.7 2.3E-17 7.8E-22 154.9 9.8 124 623-763 2-128 (136)
19 3lqn_A CBS domain protein; csg 99.7 3.9E-17 1.3E-21 155.5 11.1 134 617-763 8-144 (150)
20 3ctu_A CBS domain protein; str 99.7 5.9E-17 2E-21 155.5 12.1 134 617-763 8-143 (156)
21 2rih_A Conserved protein with 99.7 1E-16 3.4E-21 151.1 13.3 122 623-761 4-127 (141)
22 3fv6_A YQZB protein; CBS domai 99.7 2E-16 6.9E-21 152.5 15.5 133 617-763 10-145 (159)
23 1pbj_A Hypothetical protein; s 99.7 1.9E-16 6.4E-21 145.5 14.5 123 624-763 1-123 (125)
24 3oco_A Hemolysin-like protein 99.7 9.3E-17 3.2E-21 153.8 12.8 125 620-763 16-144 (153)
25 2yzi_A Hypothetical protein PH 99.7 2.1E-16 7.2E-21 148.1 15.0 127 621-763 4-130 (138)
26 3fhm_A Uncharacterized protein 99.7 1.3E-16 4.3E-21 154.9 13.6 132 617-763 17-151 (165)
27 4gqw_A CBS domain-containing p 99.7 7.9E-17 2.7E-21 153.1 11.5 131 622-763 3-144 (152)
28 2o16_A Acetoin utilization pro 99.7 2.2E-16 7.7E-21 152.4 13.9 129 622-762 3-135 (160)
29 3k2v_A Putative D-arabinose 5- 99.7 1.5E-16 5.1E-21 151.6 12.4 120 623-758 27-148 (149)
30 1y5h_A Hypothetical protein RV 99.7 8.7E-17 3E-21 149.7 10.5 127 620-762 4-131 (133)
31 2pfi_A Chloride channel protei 99.7 3.2E-16 1.1E-20 151.1 13.8 137 621-763 10-148 (164)
32 1ots_A Voltage-gated CLC-type 99.7 1.2E-15 4E-20 172.3 20.1 193 348-559 34-239 (465)
33 3kxr_A Magnesium transporter, 99.7 3.1E-16 1.1E-20 158.1 13.6 122 621-763 51-175 (205)
34 2rc3_A CBS domain; in SITU pro 99.7 4.8E-16 1.7E-20 145.2 13.6 123 625-763 7-132 (135)
35 1yav_A Hypothetical protein BS 99.7 1.9E-16 6.7E-21 152.4 11.0 132 619-763 9-143 (159)
36 3nd0_A SLL0855 protein; CLC fa 99.7 1.1E-15 3.7E-20 172.1 18.3 193 348-560 30-235 (466)
37 3oi8_A Uncharacterized protein 99.7 1.5E-16 5E-21 153.1 9.6 119 620-757 34-155 (156)
38 3sl7_A CBS domain-containing p 99.7 1.7E-16 5.8E-21 155.5 10.2 129 623-762 3-156 (180)
39 2emq_A Hypothetical conserved 99.7 3.4E-16 1.2E-20 150.1 11.8 132 619-763 6-140 (157)
40 2uv4_A 5'-AMP-activated protei 99.7 8.3E-16 2.8E-20 146.9 14.4 137 616-762 15-151 (152)
41 2j9l_A Chloride channel protei 99.7 6.4E-16 2.2E-20 152.2 13.9 134 618-763 5-166 (185)
42 3ocm_A Putative membrane prote 99.6 1.1E-15 3.8E-20 149.8 14.7 125 619-763 31-158 (173)
43 1pvm_A Conserved hypothetical 99.6 8.2E-16 2.8E-20 152.0 13.8 125 624-762 9-133 (184)
44 1o50_A CBS domain-containing p 99.6 8.8E-16 3E-20 147.5 13.6 133 618-763 10-154 (157)
45 4ene_A CLC-EC1, H(+)/CL(-) exc 99.6 6.4E-15 2.2E-19 165.3 22.2 193 348-560 19-225 (446)
46 2nyc_A Nuclear protein SNF4; b 99.6 1.6E-15 5.6E-20 142.7 14.2 134 622-763 6-142 (144)
47 2d4z_A Chloride channel protei 99.6 1.8E-15 6.1E-20 156.9 15.5 137 620-762 9-246 (250)
48 3l2b_A Probable manganase-depe 99.6 9.8E-16 3.3E-20 158.6 11.4 129 623-762 6-244 (245)
49 4fry_A Putative signal-transdu 99.6 2.4E-15 8.1E-20 144.3 13.2 124 624-763 7-136 (157)
50 1vr9_A CBS domain protein/ACT 99.6 4.7E-15 1.6E-19 150.3 12.9 120 622-762 11-130 (213)
51 3ddj_A CBS domain-containing p 99.6 9.1E-15 3.1E-19 155.2 13.6 131 622-763 154-286 (296)
52 2oux_A Magnesium transporter; 99.6 5.4E-15 1.9E-19 156.8 11.4 121 622-763 135-260 (286)
53 2yvy_A MGTE, Mg2+ transporter 99.6 1.6E-14 5.3E-19 152.6 13.0 122 621-763 132-258 (278)
54 3t4n_C Nuclear protein SNF4; C 99.5 5.6E-14 1.9E-18 151.0 16.5 135 621-763 184-321 (323)
55 2yzq_A Putative uncharacterize 99.5 2.9E-14 9.8E-19 150.0 11.8 130 622-762 124-279 (282)
56 3pc3_A CG1753, isoform A; CBS, 99.5 4.4E-14 1.5E-18 162.5 13.4 133 618-763 378-512 (527)
57 3kh5_A Protein MJ1225; AMPK, A 99.5 5.3E-14 1.8E-18 147.5 11.3 126 623-760 147-279 (280)
58 3kh5_A Protein MJ1225; AMPK, A 99.5 1.4E-13 5E-18 144.1 14.5 122 623-761 83-204 (280)
59 3ddj_A CBS domain-containing p 99.5 7.7E-14 2.6E-18 148.0 12.4 123 622-761 91-213 (296)
60 2zy9_A Mg2+ transporter MGTE; 99.5 7.6E-14 2.6E-18 158.1 12.2 121 622-763 153-278 (473)
61 2qrd_G Protein C1556.08C; AMPK 99.5 3.2E-13 1.1E-17 145.8 15.4 134 622-763 180-316 (334)
62 2yzq_A Putative uncharacterize 99.4 1.1E-13 3.8E-18 145.4 9.2 117 624-761 1-118 (282)
63 2v8q_E 5'-AMP-activated protei 99.4 9.3E-13 3.2E-17 142.0 13.2 136 616-761 27-176 (330)
64 2v8q_E 5'-AMP-activated protei 99.4 1.3E-12 4.5E-17 140.8 13.4 132 624-763 190-324 (330)
65 3t4n_C Nuclear protein SNF4; C 99.4 9.3E-13 3.2E-17 141.5 12.2 127 624-762 114-248 (323)
66 3usb_A Inosine-5'-monophosphat 99.4 1.5E-12 5.2E-17 148.4 12.6 124 620-762 109-234 (511)
67 4fxs_A Inosine-5'-monophosphat 99.3 5.1E-13 1.8E-17 151.7 3.9 120 624-762 89-209 (496)
68 2qrd_G Protein C1556.08C; AMPK 99.3 1.5E-11 5.2E-16 132.6 14.8 135 616-761 14-171 (334)
69 1me8_A Inosine-5'-monophosphat 99.3 1.9E-13 6.7E-18 155.8 -0.2 125 619-762 91-221 (503)
70 1zfj_A Inosine monophosphate d 99.3 1.2E-11 4.1E-16 141.0 13.1 120 624-762 90-211 (491)
71 4avf_A Inosine-5'-monophosphat 99.3 5.2E-13 1.8E-17 151.5 -0.4 121 622-761 86-206 (490)
72 1vrd_A Inosine-5'-monophosphat 99.2 7.7E-13 2.6E-17 151.0 0.1 123 623-763 94-216 (494)
73 4af0_A Inosine-5'-monophosphat 99.2 1.3E-12 4.4E-17 145.1 0.0 114 627-761 141-257 (556)
74 1jcn_A Inosine monophosphate d 99.1 3.6E-12 1.2E-16 146.1 -5.4 122 624-761 108-232 (514)
75 2cu0_A Inosine-5'-monophosphat 99.1 1.7E-11 5.6E-16 139.5 -0.0 115 624-761 93-207 (486)
76 3ghd_A A cystathionine beta-sy 98.8 9.7E-09 3.3E-13 84.6 7.3 65 633-701 1-65 (70)
77 1vr9_A CBS domain protein/ACT 98.7 1.6E-08 5.4E-13 102.1 8.2 102 623-738 71-172 (213)
78 3fio_A A cystathionine beta-sy 98.5 3E-07 1E-11 74.9 7.3 65 633-701 1-65 (70)
79 4esy_A CBS domain containing m 98.3 3.5E-07 1.2E-11 88.5 4.8 60 690-760 15-74 (170)
80 3ghd_A A cystathionine beta-sy 98.3 1.7E-06 5.9E-11 71.0 7.3 46 709-760 2-47 (70)
81 3lhh_A CBS domain protein; str 98.2 1.7E-06 5.9E-11 83.8 6.8 64 690-762 39-103 (172)
82 3nqr_A Magnesium and cobalt ef 98.2 3.3E-06 1.1E-10 77.2 7.7 58 622-680 67-124 (127)
83 3kpb_A Uncharacterized protein 98.1 2.9E-06 9.9E-11 76.6 6.9 58 624-681 62-119 (122)
84 3i8n_A Uncharacterized protein 98.1 3.5E-06 1.2E-10 77.4 6.8 59 622-681 70-128 (130)
85 3k6e_A CBS domain protein; str 98.1 2.6E-06 8.7E-11 81.4 6.0 60 620-681 82-141 (156)
86 4gqw_A CBS domain-containing p 98.1 3.8E-06 1.3E-10 78.7 6.7 60 622-681 83-142 (152)
87 3gby_A Uncharacterized protein 98.1 2.6E-06 8.8E-11 77.9 5.4 58 624-681 68-125 (128)
88 2ef7_A Hypothetical protein ST 98.1 5.7E-06 2E-10 75.9 7.7 60 623-682 66-125 (133)
89 3lv9_A Putative transporter; C 98.1 6.3E-06 2.1E-10 77.4 8.1 58 623-681 87-144 (148)
90 3lfr_A Putative metal ION tran 98.1 5.4E-06 1.9E-10 76.8 7.3 59 622-681 68-126 (136)
91 3kxr_A Magnesium transporter, 98.1 6.8E-06 2.3E-10 82.2 8.5 62 622-683 114-175 (205)
92 3jtf_A Magnesium and cobalt ef 98.1 7.6E-06 2.6E-10 75.0 8.1 59 622-681 67-125 (129)
93 3sl7_A CBS domain-containing p 98.1 5E-06 1.7E-10 80.5 6.9 61 622-682 96-156 (180)
94 3fio_A A cystathionine beta-sy 98.0 9.3E-06 3.2E-10 65.8 7.3 47 709-761 2-48 (70)
95 3oco_A Hemolysin-like protein 98.0 7.2E-06 2.5E-10 77.6 7.6 58 623-681 85-142 (153)
96 3hf7_A Uncharacterized CBS-dom 98.0 6.2E-06 2.1E-10 75.8 6.8 58 623-681 69-126 (130)
97 3lqn_A CBS domain protein; csg 98.0 1.2E-05 3.9E-10 75.6 8.7 60 621-682 84-143 (150)
98 3l2b_A Probable manganase-depe 98.0 7.2E-06 2.5E-10 84.1 7.6 60 692-762 6-65 (245)
99 2d4z_A Chloride channel protei 98.0 7E-06 2.4E-10 84.7 7.3 63 690-761 10-72 (250)
100 1o50_A CBS domain-containing p 98.0 7.3E-06 2.5E-10 77.8 6.8 59 622-681 94-152 (157)
101 1pbj_A Hypothetical protein; s 98.0 8.3E-06 2.8E-10 73.8 6.8 59 622-681 63-121 (125)
102 2rc3_A CBS domain; in SITU pro 98.0 9.5E-06 3.3E-10 74.7 7.0 60 621-681 71-130 (135)
103 2yzi_A Hypothetical protein PH 98.0 1.3E-05 4.3E-10 74.1 7.8 59 690-759 4-62 (138)
104 2rih_A Conserved protein with 98.0 1.2E-05 4.1E-10 74.7 7.6 58 693-761 5-64 (141)
105 2uv4_A 5'-AMP-activated protei 97.9 1.5E-05 5E-10 75.2 7.7 58 623-680 86-149 (152)
106 2p9m_A Hypothetical protein MJ 97.9 1.4E-05 4.8E-10 73.7 7.3 60 691-761 6-66 (138)
107 3fv6_A YQZB protein; CBS domai 97.9 1.1E-05 3.7E-10 76.8 6.4 62 621-682 78-144 (159)
108 2o16_A Acetoin utilization pro 97.9 1.2E-05 4.2E-10 76.6 6.8 59 692-761 4-62 (160)
109 3ocm_A Putative membrane prote 97.9 1.7E-05 5.8E-10 77.0 7.7 81 667-761 15-96 (173)
110 3k2v_A Putative D-arabinose 5- 97.9 1.9E-05 6.6E-10 74.1 7.6 61 693-762 28-88 (149)
111 3fhm_A Uncharacterized protein 97.9 1.6E-05 5.4E-10 76.2 6.8 60 621-681 90-149 (165)
112 2emq_A Hypothetical conserved 97.9 2.7E-05 9.2E-10 73.5 8.3 60 621-682 80-139 (157)
113 3ctu_A CBS domain protein; str 97.9 1.4E-05 4.9E-10 75.5 6.3 62 691-761 13-74 (156)
114 4fry_A Putative signal-transdu 97.9 1.4E-05 4.8E-10 75.7 6.1 60 622-682 76-135 (157)
115 1y5h_A Hypothetical protein RV 97.9 1.1E-05 3.7E-10 74.0 5.1 58 622-680 72-129 (133)
116 3oi8_A Uncharacterized protein 97.8 2.5E-05 8.5E-10 74.2 7.4 55 622-677 101-155 (156)
117 3usb_A Inosine-5'-monophosphat 97.8 6.9E-05 2.4E-09 85.2 12.3 103 622-737 173-276 (511)
118 1pvm_A Conserved hypothetical 97.8 1.5E-05 5.3E-10 77.8 6.0 61 621-681 72-132 (184)
119 2pfi_A Chloride channel protei 97.8 2.8E-05 9.5E-10 73.9 7.1 63 690-761 10-72 (164)
120 2j9l_A Chloride channel protei 97.8 2.9E-05 9.8E-10 75.4 7.4 61 621-682 105-165 (185)
121 2nyc_A Nuclear protein SNF4; b 97.8 3.9E-05 1.3E-09 71.0 7.7 60 692-762 7-69 (144)
122 1yav_A Hypothetical protein BS 97.8 2.9E-05 1E-09 73.7 6.3 60 621-682 83-142 (159)
123 1me8_A Inosine-5'-monophosphat 97.8 5.9E-06 2E-10 94.0 1.7 100 622-735 159-260 (503)
124 2oux_A Magnesium transporter; 97.7 4.4E-05 1.5E-09 80.4 7.6 61 622-682 199-259 (286)
125 2yvy_A MGTE, Mg2+ transporter 97.7 4E-05 1.4E-09 80.2 6.7 60 622-681 197-256 (278)
126 2zy9_A Mg2+ transporter MGTE; 97.6 7.8E-05 2.7E-09 84.1 8.4 61 622-682 217-277 (473)
127 3pc3_A CG1753, isoform A; CBS, 97.5 0.0001 3.5E-09 84.4 6.4 61 690-761 381-443 (527)
128 1zfj_A Inosine monophosphate d 97.2 0.0011 3.8E-08 75.1 11.7 60 622-681 150-210 (491)
129 4af0_A Inosine-5'-monophosphat 97.2 0.00012 4E-09 81.8 2.5 59 623-681 199-257 (556)
130 2cu0_A Inosine-5'-monophosphat 97.1 0.00011 3.7E-09 83.3 1.9 100 622-737 148-247 (486)
131 4avf_A Inosine-5'-monophosphat 97.1 0.00022 7.5E-09 80.7 3.8 60 622-681 145-206 (490)
132 1vrd_A Inosine-5'-monophosphat 96.9 0.00032 1.1E-08 79.6 3.3 60 622-681 153-214 (494)
133 4fxs_A Inosine-5'-monophosphat 96.8 0.0016 5.4E-08 73.8 7.6 52 695-757 91-142 (496)
134 1jcn_A Inosine monophosphate d 96.4 0.00045 1.5E-08 78.8 -0.8 59 622-680 171-231 (514)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=2.7e-74 Score=676.57 Aligned_cols=560 Identities=19% Similarity=0.239 Sum_probs=422.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 004220 87 GNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYALS 166 (767)
Q Consensus 87 ~~~~~~l~~~lvG~l~Gl~~~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggll~gll~~~~~~~~ 166 (767)
..++++++++++|+++|+++++|+.+++++++++.... .+... ...|+.++++|++++++++++.++ ..
T Consensus 6 ~~~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~--~~- 74 (632)
T 3org_A 6 YLLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKIS-----RLAGR---FAGYILYVVSGVALCLLSTFWCAV--LS- 74 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHSCH---HHHHHHHHHHHHHHHHHHHHHHHH--SC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhhh---hHHHHHHHHHHHHHHHHHHHHHHh--cC-
Confidence 35678999999999999999999999999998753210 00000 123444567899999888887532 12
Q ss_pred CCCCCCcccccccccCCCCCCCcccccccchhhhhccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhHHH
Q 004220 167 LDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVE 246 (767)
Q Consensus 167 ~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~l~~~l~l~~G~s~G~EgP~v~ 246 (767)
+...|+||||+++......+ +.++..++++.+.|++++++++++|+|+|||||++|
T Consensus 75 -p~a~GsGIp~v~~~l~g~~~-----------------------~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vq 130 (632)
T 3org_A 75 -TEAEGSGLPQMKSILSGFYD-----------------------KMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVH 130 (632)
T ss_dssp -GGGCBCSHHHHHHHTTTTHH-----------------------HHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHH
T ss_pred -CccCCCCHHHHHHHHhCccc-----------------------cccccccHHHHHHHHHHHHHHHhcCCCccccchHHH
Confidence 23456779998753210000 023345667889999999999999999999999999
Q ss_pred HHHHHHHHHHh--hhc---CCchhhHHHHhhhhhHHHHHhccchhHHHHHHHHhhccccccccchhhhhhhHHHHHHHHH
Q 004220 247 IGKSIAKGVGN--LFD---RRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAV 321 (767)
Q Consensus 247 iga~ig~~~~~--~~~---~~~~~~~~l~~~g~aAg~aa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~aa~ 321 (767)
+|+++|+.+++ +|+ .++.++|.+++||+|||+||+||||++|++|++|++..++ +.+++++ ++++|+
T Consensus 131 iGa~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~-------~~~~~~~-~~~as~ 202 (632)
T 3org_A 131 IACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFY-------LVQAFWK-GVLSAL 202 (632)
T ss_dssp HHHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEE-------ETTHHHH-HHHHHH
T ss_pred HHHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHH-------hHHHHHH-HHHHHH
Confidence 99999999999 787 4777889999999999999999999999999999997642 2344554 578899
Q ss_pred HHHHHHhhhcCCCC---ccccC---cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHH
Q 004220 322 IASVVSEVGLGSEP---AFKVP---EYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVM 395 (767)
Q Consensus 322 ~a~~v~~~~~g~~~---~f~~~---~~~~~~~~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l 395 (767)
+|+++++.+.+..+ +|... +.+ +++.++ +++++|++||++|.+|++++.++.++ ++.++.+.++++++.+
T Consensus 203 ~a~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l-~~~~lGi~~Gl~g~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~ 278 (632)
T 3org_A 203 SGAIVYELLYTTPLVEAFEGTNFDASDV-SRTQTL-LYAILGALMGVLGALFIRCVRSIYEL--RMRHYPGTNRYFLVGV 278 (632)
T ss_dssp HHHHHTTC------------------CC-CCSCTH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHSSTTCCTHHHHHH
T ss_pred HHHHHHHHhccCccccccccccccccCC-CcHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcchhHHHHHHH
Confidence 99998876544332 23211 122 356788 99999999999999999988877654 2233334456778888
Q ss_pred HHHHHHHHHHHhcccccC--CHHHHHHHHccCCCcc--CccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHH
Q 004220 396 GGLAVGLIALMFPEILYW--GFENVDILLESRPFVK--GLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATG 471 (767)
Q Consensus 396 ggl~vg~i~~~~P~~~g~--G~~~i~~ll~~~~~~~--~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G 471 (767)
++++++. +.+|+..|. |++.++.++++..+.. ...+..++.++++|+++|.+|+|+|+|||+|+|++++||++|
T Consensus 279 ~~~~~~~--l~~p~~~g~~~~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G 356 (632)
T 3org_A 279 VALFASA--LQYPFRLFALDPRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFG 356 (632)
T ss_dssp HHHHHHH--HTTTC------CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHH
T ss_pred HHHHHHH--HHHHHHhcCCcHHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHH
Confidence 8877663 468888665 5788888887653211 112224566789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCccccccccccchhHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhh
Q 004220 472 MAYGKFINFAIAQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSG 551 (767)
Q Consensus 472 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~alvG~aA~la~~~~aPlt~~vi~~Eltg~~~~~lP~~~a~~va~~v~~~ 551 (767)
+++|.+++.++|. ..+|+.|+++||||+++|++|+|++++ +++||||++++++|+|+++++|+++++.
T Consensus 357 ~~~g~~~~~~~p~-----------~~~p~~~a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~ 424 (632)
T 3org_A 357 RLYGELMRVVFGN-----------AIVPGSYAVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNA 424 (632)
T ss_dssp HHHHHHHHHHHCT-----------TSCHHHHHHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCc-----------ccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHH
Confidence 9999999877764 147899999999999999999999875 8999999999999999999999998875
Q ss_pred hccCcchhhhhHHhhhccccccchhhhccccccCCCcchhhcccccccccccccccccccccchhhhhhhccCccccccc
Q 004220 552 QMRRRDVKETKVAVHANTNRKRQFEIYTSRTRGLSSSDLLAEEEPYAINLCEVESSLCIDDWNLEVEELKRRVFVSEVMR 631 (767)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~l~~~~~~~~~L~~~~~~l~l~d~~~~~~~~l~~~~V~dvM~ 631 (767)
+ ++++|+..... +++| +..+. .++..++++|+|+|+
T Consensus 425 ~--~~~iY~~~~~~----------k~lp-----------------~l~~~---------------~~~~~~~~~V~diM~ 460 (632)
T 3org_A 425 F--NRSLYETLVLM----------KHLP-----------------YMPIL---------------RRDRSPEMTAREIMH 460 (632)
T ss_dssp H--CCCHHHHHHHH----------TTCC-----------------EEEEE---------------CTTCCTTSBHHHHCB
T ss_pred h--CCCHHHHHHHh----------cCCC-----------------ccccc---------------cccccccCcHHHHhh
Confidence 5 47899976532 1111 11110 012237889999999
Q ss_pred --cCceEEeCCCCHHHHHHHHH-HcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhh-c--------------------
Q 004220 632 --TRYVTVLMTTLLIEALTLML-AEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK-T-------------------- 687 (767)
Q Consensus 632 --~~~~~V~~~~tl~eal~~m~-~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~-~-------------------- 687 (767)
+++.++++++|++|+.+.|. +++++.+||+|++++++|+||++|+++.+.+.... .
T Consensus 461 p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 540 (632)
T 3org_A 461 PIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSEN 540 (632)
T ss_dssp CTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC-------------------------
T ss_pred cCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhh
Confidence 89999999999999999999 79999999999999999999999999765321100 0
Q ss_pred --ccc--------------------cccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC
Q 004220 688 --SRS--------------------KKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG 745 (767)
Q Consensus 688 --~~~--------------------~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g 745 (767)
... .+.+++|+|++ ++.++++|+++.|+.++|.+++.+++||+ | +|
T Consensus 541 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~------~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e-----~G 608 (632)
T 3org_A 541 IEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV------SPIVVTSYSLVRQLHFLFVMLMPSMIYVT-E-----RG 608 (632)
T ss_dssp ------------------------------CCSCCC------CCCEEETTCBHHHHHHHHHHTCCSEEEEE-E-----TT
T ss_pred cccCCCCCcccchhhhcccceEeeccccccchhhcC------CCceecCCCcHHHHHHHHHhcCCCEEEEE-E-----CC
Confidence 000 00136778887 89999999999999999999999999999 4 79
Q ss_pred eEEEEEeHHHHHHHhhhc
Q 004220 746 QLVGLLDRESIILACRFC 763 (767)
Q Consensus 746 ~lvGIVt~~DIl~~~~~~ 763 (767)
+++|+||++|+++++.++
T Consensus 609 ~lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 609 KLVGIVEREDVAYGYSNS 626 (632)
T ss_dssp EEEEEEEGGGTEECCCC-
T ss_pred EEEEEEehhhHHHHHhhh
Confidence 999999999999887665
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=9.3e-63 Score=557.09 Aligned_cols=417 Identities=22% Similarity=0.339 Sum_probs=347.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 004220 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAI-WIRVVLVPACGGFIVSILNQLRYALS 166 (767)
Q Consensus 88 ~~~~~l~~~lvG~l~Gl~~~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-w~~~~l~p~~ggll~gll~~~~~~~~ 166 (767)
.+.++++++++|+++|+++.+|+++++++++++++..+... ....+ |+.++++|+++|++++++.+.. .|
T Consensus 32 ~~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ll~~~l~~~~--~p 102 (465)
T 1ots_A 32 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA-------DNYPLLLTVAFLCSAVLAMFGYFLVRKY--AP 102 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-------SSHHHHHHHHHHHHHHHHHHHHHHHHHH--CG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-------cccccHHHHHHHHHHHHHHHHHHHHHHh--Cc
Confidence 46789999999999999999999999999999987532110 01123 4334678889899998886421 12
Q ss_pred CCCCCCcccccccccCCCCCCCcccccccchhhhhccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhHHH
Q 004220 167 LDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVE 246 (767)
Q Consensus 167 ~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~l~~~l~l~~G~s~G~EgP~v~ 246 (767)
...|+++||+++..... +.....++.+.|++++++++++|+|+|||||++|
T Consensus 103 --~a~GsGip~v~~~l~~~---------------------------~~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vq 153 (465)
T 1ots_A 103 --EAGGSGIPEIEGALEDQ---------------------------RPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQ 153 (465)
T ss_dssp --GGSSCSHHHHHHHHTTC---------------------------SCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHH
T ss_pred --cccCCChHHHHHHHhCC---------------------------CCCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHH
Confidence 23456799987632110 1122245678999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcC-CchhhHHHHhhhhhHHHHHhccchhHHHHHHHHhhccccccccchhhhhhhHHHHHHHHHHHHH
Q 004220 247 IGKSIAKGVGNLFDR-RPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIASV 325 (767)
Q Consensus 247 iga~ig~~~~~~~~~-~~~~~~~l~~~g~aAg~aa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~ 325 (767)
+|+++|++++|++++ +++++|.+++||+|||+||+||||++|++|++|++..++.. ..+.+.+ ++++|++|++
T Consensus 154 iGa~ig~~l~~~~~l~~~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~-----~~~~~~~-~~~as~~a~~ 227 (465)
T 1ots_A 154 IGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRY-----TLISIKA-VFIGVIMSTI 227 (465)
T ss_dssp HHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSC-----CCCCHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcch-----HHHHHHH-HHHHHHHHHH
Confidence 999999999999995 88899999999999999999999999999999999754321 1122444 6789999999
Q ss_pred HHhhhcCCCCccccCcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHH
Q 004220 326 VSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLIAL 405 (767)
Q Consensus 326 v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lggl~vg~i~~ 405 (767)
+++.++|++|.|.++.++..++.+++.++++|+++|++|.+|++++.+..++++++.+..+++..++++++|++++++++
T Consensus 228 v~~~~~G~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gl~~g~l~~ 307 (465)
T 1ots_A 228 MYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGF 307 (465)
T ss_dssp HHHHHSCSCCSSCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCceeecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHHHHHHH
Confidence 99998999999998887666778899999999999999999999998888877765432212234789999999999999
Q ss_pred HhcccccCCHHHHHHHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHHHHHHhhhcC
Q 004220 406 MFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQS 485 (767)
Q Consensus 406 ~~P~~~g~G~~~i~~ll~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~~~~~~~~~~ 485 (767)
++|+.+|+|++.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|++++.++|.
T Consensus 308 ~~P~~lG~G~~~i~~~~~~~-----~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~- 381 (465)
T 1ots_A 308 VAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQ- 381 (465)
T ss_dssp HCGGGSSCSTTHHHHHHHTC-----SCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred HhHhhcCChHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCc-
Confidence 99999999999999998764 466678888999999999999999999999999999999999999999987775
Q ss_pred CCccccccccccchhHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhccCcchhhhhHH
Q 004220 486 NPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKVA 564 (767)
Q Consensus 486 ~~~~~~~~~~~~~~~~~alvG~aA~la~~~~aPlt~~vi~~Eltg~~~~~lP~~~a~~va~~v~~~~~~~~~~~~~~~~ 564 (767)
...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++ .+.++++|+....
T Consensus 382 ---------~~~~~~~~alvGmaa~~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~-~~~~~~iY~~~l~ 450 (465)
T 1ots_A 382 ---------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQ-FTGGKPLYSAILA 450 (465)
T ss_dssp ---------GTCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHH-TTTCCCHHHHHHH
T ss_pred ---------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HhCCCChHHHHHH
Confidence 34689999999999999999999999999999999999999999999999998875 4457899997653
No 3
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=1.9e-62 Score=552.66 Aligned_cols=416 Identities=22% Similarity=0.343 Sum_probs=340.2
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 004220 86 VGNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYAL 165 (767)
Q Consensus 86 ~~~~~~~l~~~lvG~l~Gl~~~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggll~gll~~~~~~~ 165 (767)
..+.++++.++++|+++|+++.+|+++++++++++++..... ...+ ...|..+++++.+++++++++.+ +..
T Consensus 26 ~~~~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~-----~~~~-~~~~~l~~~~~~~~~~l~~~l~~--~~~ 97 (466)
T 3nd0_A 26 SLHPRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQIL-----APIP-PLAWLVTALISGGMVALSFWLMK--RFA 97 (466)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----TTSC-THHHHHHHHHHHHHHHHHHHHHT--TTC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccc-HHHHHHHHHHHHHHHHHHHHHHH--HHC
Confidence 345678999999999999999999999999999998753211 1111 01233223344444555554432 222
Q ss_pred cCCCCCCcccccccccCCCCCCCcccccccchhhhhccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchhHH
Q 004220 166 SLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSV 245 (767)
Q Consensus 166 ~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~l~~~l~l~~G~s~G~EgP~v 245 (767)
+...|++|||+++..... +.....+..+.|++++++++++|+|+|||||++
T Consensus 98 --p~a~GsGIp~v~~~l~g~---------------------------~~~~~~~~~~~k~~~~~ltig~G~S~GrEGP~v 148 (466)
T 3nd0_A 98 --PDTSGSGIPQIEGHLEGK---------------------------LPLVWQRVLPIKLVGGFLSLGAGMLAGFEGPTI 148 (466)
T ss_dssp --GGGSBCSHHHHHHHTTSS---------------------------SCCCHHHHHHHHHHHHHHHHHTTCSCCTHHHHH
T ss_pred --CCcCCCCHHHHHHHHcCC---------------------------CCCchHHHHHHHHHHHHHHHhcCCCCCCcchHH
Confidence 233467799988642211 112224567889999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCchhhHHHHhhhhhHHHHHhccchhHHHHHHHHhhccccccccchhhhhhhHHHHHHHHHHHHH
Q 004220 246 EIGKSIAKGVGNLFDRRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIASV 325 (767)
Q Consensus 246 ~iga~ig~~~~~~~~~~~~~~~~l~~~g~aAg~aa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~ 325 (767)
|+|+++|++++|+++++++++|.+++||+|||+||+||||++|++|++|++..++. ++...+.+ ++++|++|++
T Consensus 149 qiGa~ig~~l~~~~~~~~~~~r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~-----~~~~~~~~-~~~as~~a~~ 222 (466)
T 3nd0_A 149 QMGGSIGQMTGGWFKATQENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFR-----SQTLAYHS-LLFGCVMATI 222 (466)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCS-----SCCTTHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhCCchHHHHHHHHhhhcccc-----HHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999875432 12233444 6889999999
Q ss_pred HHhhhcCCCCccccCcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHH
Q 004220 326 VSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLIAL 405 (767)
Q Consensus 326 v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lggl~vg~i~~ 405 (767)
+++.++|+++.|.++.++..++.+++.++++|+++|++|.+|++++.+..++++++.+ .+++++++++|++++++.+
T Consensus 223 v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~lf~~~~~~~~~~~~~~~~---~~~~~~~~l~g~~~g~l~~ 299 (466)
T 3nd0_A 223 ILRMIRGQSAIISLTEFKRVPLDSLWMFIILGILFGVMGYTFNRGLFKVLDWFDRLPP---LATKWKGFLLGSIIGILSL 299 (466)
T ss_dssp HHHHHTCSSCSSCCTTCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCCCceecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccHHHHHHHHHHHHHHHHH
Confidence 9999899999999987665678899999999999999999999988877666543321 2456788999999999999
Q ss_pred HhcccccCCHHHHHHHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHHHHHHhhhcC
Q 004220 406 MFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQS 485 (767)
Q Consensus 406 ~~P~~~g~G~~~i~~ll~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~~~~~~~~~~ 485 (767)
++|+.+|+|++.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++.++|.
T Consensus 300 ~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~- 373 (466)
T 3nd0_A 300 FPLPLTDGGDNAVLWAFNSQ-----SHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLLFPS- 373 (466)
T ss_dssp SSSSCSSSSHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHHHHHHHCTT-
T ss_pred HHHHHcCCcHHHHHHHHcCC-----ccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHHHHHHhCCc-
Confidence 99999999999999988764 466678889999999999999999999999999999999999999999987764
Q ss_pred CCccccccccccchhHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhccCcchhhhhH
Q 004220 486 NPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKV 563 (767)
Q Consensus 486 ~~~~~~~~~~~~~~~~~alvG~aA~la~~~~aPlt~~vi~~Eltg~~~~~lP~~~a~~va~~v~~~~~~~~~~~~~~~ 563 (767)
...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++ .+.++++||...
T Consensus 374 ---------~~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~-~~~~~~iY~~~l 441 (466)
T 3nd0_A 374 ---------QIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAE-ALGGKPIYTVLL 441 (466)
T ss_dssp ---------TCSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHT-TSCCCCHHHHHH
T ss_pred ---------cccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHH-HhCCCChHHHHH
Confidence 23578999999999999999999999999999999999999999999999998875 556899999865
No 4
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=6.3e-62 Score=547.10 Aligned_cols=415 Identities=22% Similarity=0.336 Sum_probs=337.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHHH---HHHHHHHHHHHHHHHHHHHh
Q 004220 87 GNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIR---VVLVPACGGFIVSILNQLRY 163 (767)
Q Consensus 87 ~~~~~~l~~~lvG~l~Gl~~~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~---~~l~p~~ggll~gll~~~~~ 163 (767)
...++++.++++|+++|+++.+|+++++++++++++..+... ..+|+. .++++.+++++++++.+.
T Consensus 16 ~~~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 84 (446)
T 4ene_A 16 TPLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA---------DNYPLLLTVAFLCSAVLAMFGYFLVRK-- 84 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------ccchHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 356779999999999999999999999999999987532111 113322 233345566666666432
Q ss_pred hhcCCCCCCcccccccccCCCCCCCcccccccchhhhhccCCCCCccccchhhhhHHHHHHHHHHHHHHhcCCccCCchh
Q 004220 164 ALSLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGP 243 (767)
Q Consensus 164 ~~~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~k~l~~~l~l~~G~s~G~EgP 243 (767)
..| ...|+++||+++.... .+....++..+.|++++++++++|+|+|||||
T Consensus 85 ~~p--~a~GsGip~v~~~l~~---------------------------~~~~~~~r~~~~k~~~~~lti~~G~s~GrEGP 135 (446)
T 4ene_A 85 YAP--EAGGSGIPEIEGALED---------------------------QRPVRWWRVLPVKFFGGLGTLGGGMVLGREGP 135 (446)
T ss_dssp HCG--GGSSCSHHHHHHHHHT---------------------------CSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHH
T ss_pred hCc--ccCCCCHHHHHHHHhC---------------------------CCccchHHHHHHHHHHHHHHHhcCCccCCcch
Confidence 222 2345679998753110 01122345678899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCchhhH-HHHhhhhhHHHHHhccchhHHHHHHHHhhccccccccchhhhhhhHHHHHHHHHH
Q 004220 244 SVEIGKSIAKGVGNLFDRRPRRKV-SLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVI 322 (767)
Q Consensus 244 ~v~iga~ig~~~~~~~~~~~~~~~-~l~~~g~aAg~aa~F~aPl~g~lf~~E~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 322 (767)
++|+|+++|++++|+++++++++| .+++||+|||+||+||||++|++|++|++..++. ++.+.+.+ +++++++
T Consensus 136 ~vqiGa~ig~~~~~~~~~~~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~-----~~~~~~~~-~~~as~~ 209 (446)
T 4ene_A 136 TVQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFR-----YTLISIKA-VFIGVIM 209 (446)
T ss_dssp HHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSS-----CCCCCHHH-HHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcc-----hhHHHHHH-HHHHHHH
Confidence 999999999999999999888886 9999999999999999999999999999975421 12234444 6889999
Q ss_pred HHHHHhhhcCCCCccccCcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHH
Q 004220 323 ASVVSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGL 402 (767)
Q Consensus 323 a~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lggl~vg~ 402 (767)
|+++++.+.|+++.|.+++++..+..+++.++++|+++|++|.+|++++.+..++++++.++...+..+.+.+.|+++++
T Consensus 210 a~~v~~~~~g~~~~~~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~ 289 (446)
T 4ene_A 210 STIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGL 289 (446)
T ss_dssp HHHHHHHTTTTCCSCCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 99999998999999999887766778899999999999999999999998888877765432111112223456778888
Q ss_pred HHHHhcccccCCHHHHHHHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHHHHHHhh
Q 004220 403 IALMFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAI 482 (767)
Q Consensus 403 i~~~~P~~~g~G~~~i~~ll~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~~~~~~~ 482 (767)
+.+++|+.+|+|++.++.+++++ ++...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++.++
T Consensus 290 l~~~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~ 364 (446)
T 4ene_A 290 LGFVAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELF 364 (446)
T ss_dssp HHHHCGGGSSCCSTHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhHhhcCCcHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999999988764 4666778889999999999999999999999999999999999999999877
Q ss_pred hcCCCccccccccccchhHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhccCcchhhhh
Q 004220 483 AQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETK 562 (767)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~alvG~aA~la~~~~aPlt~~vi~~Eltg~~~~~lP~~~a~~va~~v~~~~~~~~~~~~~~ 562 (767)
|. ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++ .+.++++||..
T Consensus 365 p~----------~~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~-~~~~~~iY~~~ 433 (446)
T 4ene_A 365 PQ----------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQ-FTGGKPLYSAI 433 (446)
T ss_dssp GG----------GTCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHH-HTTCCCHHHHH
T ss_pred Cc----------cccCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHH-HhCCCChHHHH
Confidence 65 23689999999999999999999999999999999999999999999999998875 55689999976
Q ss_pred H
Q 004220 563 V 563 (767)
Q Consensus 563 ~ 563 (767)
.
T Consensus 434 l 434 (446)
T 4ene_A 434 L 434 (446)
T ss_dssp H
T ss_pred H
Confidence 5
No 5
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.80 E-value=7.5e-19 Score=206.16 Aligned_cols=191 Identities=16% Similarity=0.100 Sum_probs=145.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----C-CchhHHHHHHHHHHHHHH-HHhcccccCCHHHHHHH
Q 004220 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN----G-IPKAVFPVMGGLAVGLIA-LMFPEILYWGFENVDIL 421 (767)
Q Consensus 348 ~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~----~-~~~~~~~~lggl~vg~i~-~~~P~~~g~G~~~i~~l 421 (767)
..+.+.+++|+++|+++.+|..++.+..+++..+.... + +.+...|++++++++.+. .+.|+..|+|.++++..
T Consensus 9 r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp~v~~~ 88 (632)
T 3org_A 9 RLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGSGLPQMKSI 88 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHH
Confidence 34567789999999999999999888877654333211 1 112235667777777665 67899999999999888
Q ss_pred HccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHH--HHHHhhhcCCCccccccccccch
Q 004220 422 LESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGK--FINFAIAQSNPTIHFSILEVASP 499 (767)
Q Consensus 422 l~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 499 (767)
+++.. +.......+...+.|++.+.+|+|+|.+.|+++|++++||++|..+++ .++.... +..+.
T Consensus 89 l~g~~--~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~-----------~~~~~ 155 (632)
T 3org_A 89 LSGFY--DKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCT-----------DRALR 155 (632)
T ss_dssp TTTTH--HHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHH-----------SHHHH
T ss_pred HhCcc--ccccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccC-----------CHHHH
Confidence 76641 001112335678899999999999999999999999999999998888 6663221 12345
Q ss_pred hHHHHHHHHHHHHHhcCchHHHHHHHHHHhCC---chhHHHHHHHHHHHHHHHhh
Q 004220 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELTQD---YRIVLPLLGAVGLSSWFTSG 551 (767)
Q Consensus 500 ~~~alvG~aA~la~~~~aPlt~~vi~~Eltg~---~~~~lP~~~a~~va~~v~~~ 551 (767)
..+..||+||.+|++++||+++++|.+|.... ...+.|.++++++++++++.
T Consensus 156 r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~ 210 (632)
T 3org_A 156 LQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYEL 210 (632)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999998753 24678999999888887653
No 6
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=7.4e-19 Score=171.67 Aligned_cols=133 Identities=26% Similarity=0.307 Sum_probs=115.0
Q ss_pred hhhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHh--------------
Q 004220 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ-------------- 684 (767)
Q Consensus 619 ~~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~-------------- 684 (767)
..+++++|+|+|+++++++++++|+.+|++.|.+++++.+||+|++|+++|+||.+|+++......
T Consensus 13 ~~l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~ 92 (170)
T 4esy_A 13 RAIRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPA 92 (170)
T ss_dssp HHHHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCH
T ss_pred HHHcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccch
Confidence 457789999999999999999999999999999999999999999999999999999976432100
Q ss_pred ----hhcccccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHh
Q 004220 685 ----AKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (767)
Q Consensus 685 ----~~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~ 760 (767)
.......+.+++++|++ ++.++++++++.+|+++|.+++++++||+| +|+++|+||++||++++
T Consensus 93 ~~~~~~~~~~~~~~v~~im~~------~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd------~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 93 PEVEHLFETGRKLTASAVMTQ------PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ------DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHHHHHTTCBHHHHCBC------CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHTTTS
T ss_pred hhHHhhhccccccchhhhccc------CcccCCcchhHHHHHHHHHHcCCcEEEEEE------CCEEEEEEEHHHHHHHH
Confidence 00112345679999998 899999999999999999999999999998 68999999999999986
Q ss_pred hhc
Q 004220 761 RFC 763 (767)
Q Consensus 761 ~~~ 763 (767)
-++
T Consensus 161 ~~~ 163 (170)
T 4esy_A 161 LLE 163 (170)
T ss_dssp CCC
T ss_pred Hhc
Confidence 544
No 7
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.75 E-value=4.7e-18 Score=163.96 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=112.2
Q ss_pred cCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 623 ~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
..+++++|++ ++.++++++|+.+|++.|.+++++++||+|++++++|+||.+|+.+.............+.+++++|+
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~ 93 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTK 93 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCB
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhc
Confidence 4578999986 89999999999999999999999999999999999999999999988765443333456778999999
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+ ++.++++++++.+|+++|.++++ +||||+ +|+++|+||++|+++++.+.
T Consensus 94 ~------~~~~v~~~~~l~~~~~~m~~~~~--lpVVd~-----~g~l~GiiT~~Dil~~~~~~ 143 (156)
T 3k6e_A 94 T------DVAVVSPDFTITEVLHKLVDESF--LPVVDA-----EGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp C------SCCCBCTTCCHHHHHHHTTTSSE--EEEECT-----TSBEEEEEEHHHHHHHHHHH
T ss_pred C------CceecccccHHHHHHHHHHHcCC--eEEEec-----CCEEEEEEEHHHHHHHHHHH
Confidence 8 89999999999999999988764 999997 89999999999999998543
No 8
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.74 E-value=1.7e-17 Score=157.82 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=113.0
Q ss_pred hhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccchh
Q 004220 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (767)
Q Consensus 620 ~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (767)
.++..+|+|+|++ ++.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+.+...... +.+++
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-------~~~v~ 91 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN-------KIELE 91 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS-------CCCGG
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC-------CccHH
Confidence 4677899999999 99999999999999999999999999999987 89999999999998865321 56789
Q ss_pred hccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 697 dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
++| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 92 ~~m-~------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 92 EIL-R------DIIYISENLTIDKALERIRKEKLQLAIVVDE-----YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp GTC-B------CCEEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSSEEEEEEHHHHHHHHHH
T ss_pred Hhc-C------CCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 999 6 6899999999999999999999999999997 7999999999999998754
No 9
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.73 E-value=2e-17 Score=153.85 Aligned_cols=124 Identities=19% Similarity=0.121 Sum_probs=107.8
Q ss_pred hccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccchhh
Q 004220 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (767)
Q Consensus 621 l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (767)
++..+|+|+|++ ++.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+.+..... ..+.++++
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~------~~~~~v~~ 76 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSG------SGQKQLGA 76 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTT------TTTSBHHH
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcC------CCcCCHHH
Confidence 567899999995 56789999999999999999999999999987 8999999999999887532 13567999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+|++ +.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 77 ~m~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 77 VMRP-------IQVVLNNTALPKVFDQMMTHRLQLALVVDE-----YGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp HSEE-------CCEEETTSCHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHHHHHT
T ss_pred HhcC-------CcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-----CCCEEEEEEHHHHHHHHcC
Confidence 9954 789999999999999999999999999997 8999999999999998754
No 10
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.72 E-value=3.1e-17 Score=150.29 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=109.8
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccCC
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~ 703 (767)
++|+|+|++++.++++++++.++++.|.+++.+.+||+|++|+++|+|+.+|+.+.+.. ...+++++|.+
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~--------~~~~v~~~~~~-- 70 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--------NKKTIEEIMTR-- 70 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT--------TCCBGGGTSBS--
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh--------cccCHHHHhcC--
Confidence 47899999999999999999999999999999999999999999999999999987742 12378999987
Q ss_pred CCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 704 ~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.++
T Consensus 71 ----~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-----~g~~~Givt~~dl~~~l~~~ 121 (122)
T 3kpb_A 71 ----NVITAHEDEPVDHVAIKMSKYNISGVPVVDD-----YRRVVGIVTSEDISRLFGGK 121 (122)
T ss_dssp ----SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHC--
T ss_pred ----CCeEECCCCCHHHHHHHHHHhCCCeEEEECC-----CCCEEEEEeHHHHHHHhhcC
Confidence 7899999999999999999999999999997 79999999999999988654
No 11
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.72 E-value=1.3e-17 Score=154.40 Aligned_cols=122 Identities=17% Similarity=0.203 Sum_probs=107.4
Q ss_pred cCccccccccC--ceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccchhhcc
Q 004220 623 RVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (767)
Q Consensus 623 ~~~V~dvM~~~--~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm 699 (767)
+++|+|+|+++ +.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+.+.+.. ...+.+++++|
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~------~~~~~~v~~~m 75 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS------DAEAFSMDKVL 75 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST------TCCCCCHHHHC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc------cCCCCCHHHHc
Confidence 57899999965 9999999999999999999999999999987 899999999999876531 12466799999
Q ss_pred ccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 76 ~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 76 RT-------AVVVPESKRVDRMLKEFRSQRYHMAIVIDE-----FGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp BC-------CCEEETTCBHHHHHHHHHHTTCCEEEEECT-----TSCEEEEEEHHHHHHHC--
T ss_pred CC-------CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 65 679999999999999999999999999997 8999999999999998643
No 12
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.72 E-value=4.3e-17 Score=151.84 Aligned_cols=125 Identities=24% Similarity=0.333 Sum_probs=112.9
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
++++|+++|++++.++++++++.+|++.|.+++.+.+||+| +++++|+||.+|+.+.+... ...+.+++++|.+
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~-----~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKG-----KSLETKAEEFMTA 75 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTT-----CCTTCBGGGTSEE
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcC-----CCcccCHHHHcCC
Confidence 56899999999999999999999999999999999999999 89999999999998876532 1235679999987
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.+.
T Consensus 76 ------~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 76 ------SLITIREDSPITGALALMRQFNIRHLPVVDD-----KGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp ------CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHH
T ss_pred ------CCEEECCCCCHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEEHHHHHHHHHHH
Confidence 7899999999999999999999999999997 79999999999999988654
No 13
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.72 E-value=3.2e-17 Score=152.72 Aligned_cols=124 Identities=15% Similarity=0.112 Sum_probs=108.6
Q ss_pred cCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCC-CCcEEEEEehhhHHHHHHHHhhhcccccccchhhcc
Q 004220 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDN-DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (767)
Q Consensus 623 ~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~-~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm 699 (767)
+++|+|+|++ ++.++++++++.+|++.|.+++++.+||+|+ +++++|+||.+|+++..... ....+.+++++|
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~----~~~~~~~v~~~m 76 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEK----KEFTKEIMLRAA 76 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSS----SCCCHHHHHHHS
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhcc----CccchhhHHHhc
Confidence 3689999975 7899999999999999999999999999975 58999999999999876421 123346789999
Q ss_pred ccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+ ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 77 ~-------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 77 D-------EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-----YGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp B-------CCCEEETTCBHHHHHHHHHHHCCCEEEEECT-----TSCEEEEEEHHHHHHHHHC
T ss_pred c-------CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-----CCCEEEEeeHHHHHHHHhC
Confidence 4 4789999999999999999999999999997 8999999999999998754
No 14
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.71 E-value=3.9e-17 Score=151.82 Aligned_cols=121 Identities=17% Similarity=0.178 Sum_probs=107.3
Q ss_pred ccCccccccc--cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccchhhc
Q 004220 622 RRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (767)
Q Consensus 622 ~~~~V~dvM~--~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dv 698 (767)
..++|+|+|+ +++.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+.+... ..+.+++++
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~--------~~~~~v~~~ 74 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYML--------EPALDIRSL 74 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGT--------CTTSCGGGG
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhc--------cCCcCHHHH
Confidence 4678999999 578999999999999999999999999999985 89999999999987652 134568899
Q ss_pred cccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
|++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 75 m~~-------~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-----~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 75 VRP-------AVFIPEVKRLNVLLREFRASRNHLAIVIDE-----HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp CBC-------CCEEETTCBHHHHHHHHHTSSCCEEEEECC------CCEEEEEEHHHHHHHHHH
T ss_pred hCC-------CeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 864 789999999999999999999999999997 7999999999999998754
No 15
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.71 E-value=7.6e-17 Score=151.02 Aligned_cols=128 Identities=26% Similarity=0.361 Sum_probs=113.0
Q ss_pred hhhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhH-HHHHHHHhhhcccccccchhh
Q 004220 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDI-EEFSKYAQAKTSRSKKLLVSE 697 (767)
Q Consensus 619 ~~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL-~~~l~~~~~~~~~~~~~~V~d 697 (767)
+.+.+.+++++|++++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+ .+.+.. ....+.++++
T Consensus 3 ~~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~-----~~~~~~~v~~ 77 (138)
T 2p9m_A 3 DTLKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD-----KYTLETTIGD 77 (138)
T ss_dssp --CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT-----CCCSSCBHHH
T ss_pred cccccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh-----cccCCcCHHH
Confidence 3567889999999999999999999999999999999999999988999999999999 776531 2234667999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcC-----CCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYG-----VNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~-----~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+|++ ++.++++++++.++++.|.+++ .+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 78 ~m~~------~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 78 VMTK------DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-----NNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp HSCS------SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred HhCC------CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 9988 7899999999999999999999 999999997 7999999999999998764
No 16
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.71 E-value=2.8e-17 Score=152.40 Aligned_cols=124 Identities=21% Similarity=0.212 Sum_probs=111.2
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
..++++++|++++.++++++++.+|++.|.+++.+.+||+|+ ++++|+||.+|+.+.... ....+.+++++|++
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~-----~~~~~~~v~~~m~~ 76 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKG-----WPTVKEKLGEELLE 76 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSS-----SCCTTCBCCGGGCB
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhh-----CCcccCcHHHHccC
Confidence 467999999999999999999999999999999999999998 999999999999976531 11123678999988
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 77 ------~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-----~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 77 ------TVRSYRPGEQLFDNLISVAAAKCSVVPLADE-----DGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp ------CCCCBCTTSBGGGSHHHHHHCSSSEEEEECT-----TCBEEEEEEHHHHHHHHHT
T ss_pred ------CCcEECCCCCHHHHHHHHHhCCCcEEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 7889999999999999999999999999997 8999999999999998864
No 17
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.70 E-value=9.1e-17 Score=157.23 Aligned_cols=125 Identities=17% Similarity=0.138 Sum_probs=110.0
Q ss_pred hhccCccccccc--cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccchh
Q 004220 620 LKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (767)
Q Consensus 620 ~l~~~~V~dvM~--~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (767)
.+...+|+|+|+ +++.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+.+..... .+.+++
T Consensus 38 ~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~ 110 (172)
T 3lhh_A 38 RLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG-------ERLELV 110 (172)
T ss_dssp -----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT-------CCCCGG
T ss_pred ccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc-------CcccHH
Confidence 466789999999 688999999999999999999999999999987 9999999999999877421 256799
Q ss_pred hccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 697 dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++..+
T Consensus 111 ~im-~------~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 111 DLV-K------NCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-----YGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp GGC-B------CCEEEETTCCHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHTT
T ss_pred HHh-c------CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-----CCCEEEEeeHHHHHHHHhCC
Confidence 999 6 6899999999999999999999999999997 79999999999999988654
No 18
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.70 E-value=2.3e-17 Score=154.91 Aligned_cols=124 Identities=15% Similarity=0.123 Sum_probs=107.7
Q ss_pred cCccccccc--cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccchhhcc
Q 004220 623 RVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (767)
Q Consensus 623 ~~~V~dvM~--~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm 699 (767)
+++|+|+|+ +++.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+++.+.. ....+.+++++|
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~-----~~~~~~~v~~~m 76 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK-----ADGDSDDVKKLL 76 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS-----SSGGGCCGGGTC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh-----ccCCCcCHHHHc
Confidence 568999999 578999999999999999999999999999987 899999999999976531 122456789999
Q ss_pred ccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+..+
T Consensus 77 ~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 77 RP-------ATFVPESKRLNVLLREFRANHNHMAIVIDE-----YGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp BC-------CCEEETTCBHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHTTC---
T ss_pred CC-------CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhCC
Confidence 65 789999999999999999999999999997 89999999999999877543
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.70 E-value=3.9e-17 Score=155.49 Aligned_cols=134 Identities=18% Similarity=0.148 Sum_probs=115.7
Q ss_pred hhhhhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhh-hccccccc
Q 004220 617 VEELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-KTSRSKKL 693 (767)
Q Consensus 617 ~~~~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~-~~~~~~~~ 693 (767)
....+..++|+|+|++ ++.++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+..... ......+.
T Consensus 8 ~~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 8 PKDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp CHHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HHHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3456788999999995 69999999999999999999999999999999999999999999987632110 01123567
Q ss_pred chhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 694 LVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 694 ~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++++|++ ++.++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++.+.+.
T Consensus 88 ~v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-----~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 88 KVEQVMKQ------DIPVLKLEDSFAKALEMTIDHPF--ICAVNE-----DGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp BGGGTCBS------SCCEEETTCBHHHHHHHHHHCSE--EEEECT-----TCBEEEEEEHHHHHHHHHHH
T ss_pred CHHHHhcC------CCceeCCCCCHHHHHHHHHhCCE--EEEECC-----CCcEEEEEEHHHHHHHHHHH
Confidence 79999988 78999999999999999999987 999997 89999999999999988654
No 20
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.70 E-value=5.9e-17 Score=155.46 Aligned_cols=134 Identities=16% Similarity=0.144 Sum_probs=115.0
Q ss_pred hhhhhccCccccccc--cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccc
Q 004220 617 VEELKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLL 694 (767)
Q Consensus 617 ~~~~l~~~~V~dvM~--~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~ 694 (767)
....+...+++|+|+ +++.++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.............+.+
T Consensus 8 ~~~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~ 87 (156)
T 3ctu_A 8 EFETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTD 87 (156)
T ss_dssp HHHHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSB
T ss_pred HHHHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCc
Confidence 344566778999999 589999999999999999999999999999999999999999999988764322222234678
Q ss_pred hhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 695 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 695 V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++++|++ ++.++++++++.+|++.|.+++ .+||+|+ +|+++|+||++|+++.+.+.
T Consensus 88 v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-----~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 88 IVHMTKT------DVAVVSPDFTITEVLHKLVDES--FLPVVDA-----EGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp GGGGCBC------SCCCBCSSCCHHHHHHHTTTSS--EEEEECT-----TSBEEEEEETTHHHHHHHHH
T ss_pred HHHhccC------CceeeCCCCcHHHHHHHHHHcC--eEEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 9999988 7899999999999999999886 7999997 89999999999999998654
No 21
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.70 E-value=1e-16 Score=151.10 Aligned_cols=122 Identities=18% Similarity=0.177 Sum_probs=109.3
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCC--cEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN--ILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g--~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
.++|+|+|++++.++++++++.++++.|.+++.+.+||+|+++ +++|+||.+|+.+.+.+. ...+.+++++|.
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~-----~~~~~~v~~~m~ 78 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQR-----LDLDGPAMPIAN 78 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTT-----CCTTSBSGGGCB
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcC-----CCCCCCHHHHcC
Confidence 3689999999999999999999999999999999999999888 999999999999876422 123567899998
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
+ ++.+++++ ++.+++++|.+++.+.+||+|+ +|+++|+||++|++++..
T Consensus 79 ~------~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 79 S------PITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-----NGELVGVLSIRDLCFERA 127 (141)
T ss_dssp C------CCEEETTS-BHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHSCHH
T ss_pred C------CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-----CCcEEEEEEHHHHHHHHH
Confidence 8 79999999 9999999999999999999997 799999999999987554
No 22
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.70 E-value=2e-16 Score=152.46 Aligned_cols=133 Identities=13% Similarity=0.180 Sum_probs=115.4
Q ss_pred hhhhhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchh
Q 004220 617 VEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (767)
Q Consensus 617 ~~~~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (767)
....+..++|+|+|++ ++++++++++.+|++.|.+++.+.+||+|++++++|+||.+|+.+.+.. .....+.+++
T Consensus 10 l~~~l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~----~~~~~~~~v~ 84 (159)
T 3fv6_A 10 LADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIG----QQELTSVPVH 84 (159)
T ss_dssp HHHHHTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTS----CSCTTTCBGG
T ss_pred HHHHHhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhc----cCcccCcCHH
Confidence 3567888999999997 5599999999999999999999999999999999999999999987632 1233566799
Q ss_pred hccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC---eEEEEEeHHHHHHHhhhc
Q 004220 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG---QLVGLLDRESIILACRFC 763 (767)
Q Consensus 697 dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g---~lvGIVt~~DIl~~~~~~ 763 (767)
++|++ ..++.++++++++.+|+++|.+++.+.+||+|+ +| +++|+||++|+++.+.+.
T Consensus 85 ~~m~~----~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~~~vGiit~~dil~~l~~~ 145 (159)
T 3fv6_A 85 IIMTR----MPNITVCRREDYVMDIAKHLIEKQIDALPVIKD-----TDKGFEVIGRVTKTNMTKILVSL 145 (159)
T ss_dssp GTSEE----TTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-----CSSSEEEEEEEEHHHHHHHHHHH
T ss_pred HHHcC----CCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-----CCcceeEEEEEEHHHHHHHHHHH
Confidence 99974 124788999999999999999999999999997 67 999999999999988643
No 23
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.69 E-value=1.9e-16 Score=145.55 Aligned_cols=123 Identities=20% Similarity=0.195 Sum_probs=109.2
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccCC
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~ 703 (767)
++|+|+|++++.++++++++.+|++.|.+++.+.+||+| +|+++|+||.+|+.+.+.+. ....+.+++++|++
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~----~~~~~~~v~~~m~~-- 73 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEG----DDLAEVKVWEVMER-- 73 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHT----CCTTTSBHHHHCBC--
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcC----CcccccCHHHHcCC--
Confidence 478999999999999999999999999999999999999 89999999999999876432 12346789999988
Q ss_pred CCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 704 ~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+++.+.++
T Consensus 74 ----~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd------~~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 74 ----DLVTISPRATIKEAAEKMVKNVVWRLLVEE------DDEIIGVISATDILRAKMAK 123 (125)
T ss_dssp ----GGGEECTTSCHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHC--
T ss_pred ----CCeEECCCCCHHHHHHHHHhcCCcEEEEEE------CCEEEEEEEHHHHHHHHHhc
Confidence 789999999999999999999999999999 58999999999999987653
No 24
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.69 E-value=9.3e-17 Score=153.82 Aligned_cols=125 Identities=21% Similarity=0.165 Sum_probs=112.2
Q ss_pred hhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEe-CC-CCcEEEEEehhhHHHHHHHHhhhcccccccch
Q 004220 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIV-DN-DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (767)
Q Consensus 620 ~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVv-d~-~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (767)
.++..+|+++|++ ++.++++++++.+|++.|.+++++.+||+ |+ +++++|+||.+|+.+.+... .+.++
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~-------~~~~v 88 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARID-------DKAKI 88 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHH-------TTSBG
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcC-------CCCcH
Confidence 4677899999997 89999999999999999999999999999 65 48999999999999887532 15678
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++| + ++.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||++|+++.+..+
T Consensus 89 ~~~m-~------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-----~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 89 STIM-R------DIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-----YGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp GGTC-B------CCEEEETTSBHHHHHHHHHHTTCSCEEEECT-----TSCEEEEECHHHHHHHHHC-
T ss_pred HHHh-C------CCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-----CCCEEEEeeHHHHHHHHhcc
Confidence 9999 6 6899999999999999999999999999997 79999999999999988654
No 25
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.69 E-value=2.1e-16 Score=148.07 Aligned_cols=127 Identities=20% Similarity=0.249 Sum_probs=112.6
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
+...+|+++|++++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+.+.... .....+.+++++|+
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~----~~~~~~~~v~~~m~ 79 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIV----PGLPYDIPVERIMT 79 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTT----TCCCTTSBGGGTCB
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHh----cCCcccCCHHHHhh
Confidence 56789999999999999999999999999999999999999989999999999999743221 11134567999998
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+ ++.++++++++.+++++|.+++.+++ |+|+ +|+++|+||++|+++.+.++
T Consensus 80 ~------~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-----~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 80 R------NLITANVNTPLGEVLRKMAEHRIKHI-LIEE-----EGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp C------SCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-----TTEEEEEEEHHHHHHHHHCC
T ss_pred C------CCeEECCCCcHHHHHHHHHhcCCCEE-EECC-----CCCEEEEEEHHHHHHHHHHH
Confidence 8 78999999999999999999999999 9997 89999999999999998754
No 26
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=1.3e-16 Score=154.90 Aligned_cols=132 Identities=20% Similarity=0.169 Sum_probs=117.7
Q ss_pred hhhhhccCcccccccc---CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhccccccc
Q 004220 617 VEELKRRVFVSEVMRT---RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKL 693 (767)
Q Consensus 617 ~~~~l~~~~V~dvM~~---~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~ 693 (767)
....+..++|+|+|++ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ....+.
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---~~~~~~ 93 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQG---AASLQQ 93 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHG---GGGGTS
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcC---CccccC
Confidence 3456788999999996 7999999999999999999999999999999999999999999998876432 123467
Q ss_pred chhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 694 LVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 694 ~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++++|.+ ++.++++++++.+++++|.+++.+.+||+| +|+++|+||++|+++.+.++
T Consensus 94 ~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd------~g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 94 SVSVAMTK------NVVRCQHNSTTDQLMEIMTGGRFRHVPVEE------NGRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp BGGGTSBS------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHTTCC
T ss_pred CHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHHH
Confidence 79999988 789999999999999999999999999999 58999999999999998654
No 27
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.69 E-value=7.9e-17 Score=153.08 Aligned_cols=131 Identities=25% Similarity=0.305 Sum_probs=110.7
Q ss_pred ccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHH---------hhhcccc
Q 004220 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA---------QAKTSRS 690 (767)
Q Consensus 622 ~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~---------~~~~~~~ 690 (767)
+.++|+|+|++ +++++++++++.+|++.|.+++++.+||+|++++++|+||.+|+.+..... .......
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 45789999998 899999999999999999999999999999999999999999998543211 0000123
Q ss_pred cccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 691 KKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 691 ~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
.+.+++++|++ ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.+.
T Consensus 83 ~~~~v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 83 NGKLVGDLMTP------APLVVEEKTNLEDAAKILLETKYRRLPVVDS-----DGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp -CCBHHHHSEE------SCCCEESSSBHHHHHHHHHHSSCCEEEEECT-----TSBEEEEEEHHHHHHHHHC-
T ss_pred ccccHHHhcCC------CceEECCCCcHHHHHHHHHHCCCCEEEEECC-----CCcEEEEEEHHHHHHHHHhc
Confidence 45679999998 7889999999999999999999999999997 89999999999999987643
No 28
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.68 E-value=2.2e-16 Score=152.40 Aligned_cols=129 Identities=22% Similarity=0.254 Sum_probs=112.1
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhh----cccccccchhh
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK----TSRSKKLLVSE 697 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~----~~~~~~~~V~d 697 (767)
..++|+|+|++++.++++++|+.+|++.|.+++.+.+||+|++|+++|+||.+|+.+........ .....+.++++
T Consensus 3 ~~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (160)
T 2o16_A 3 LMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE 82 (160)
T ss_dssp CCCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH
T ss_pred CcCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH
Confidence 45789999999999999999999999999999999999999899999999999999876532110 11234678999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+|++ ++.++++++++.+|+++|.+++.+.+||+| +|+++|+||++|+++.+.+
T Consensus 83 im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd------~g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 83 VMHT------DVTSVAPQAGLKESAIYMQKHKIGCLPVVA------KDVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp HSCS------CEEEBCTTSBHHHHHHHHHHTTCSCEEEEE------TTEEEEEECHHHHHHHHHH
T ss_pred HhcC------CCeEECCCCCHHHHHHHHHHhCCCEEEEEE------CCEEEEEEEHHHHHHHHHH
Confidence 9988 789999999999999999999999999999 5899999999999998654
No 29
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.68 E-value=1.5e-16 Score=151.58 Aligned_cols=120 Identities=20% Similarity=0.258 Sum_probs=108.7
Q ss_pred cCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 623 ~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
.++|+|+|++ ++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+.. .....+.+++++|+
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~----~~~~~~~~v~~~m~ 102 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT----GVDMRDASIADVMT 102 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS----SSCCTTCBHHHHSE
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc----CCCcccCcHHHHcC
Confidence 3699999999 99999999999999999999999999999999999999999999987642 12235678999998
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 758 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~ 758 (767)
+ ++.++++++++.+++++|.+++.+.+||+|+ ++++|+||++|+++
T Consensus 103 ~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~------~~~~Giit~~dil~ 148 (149)
T 3k2v_A 103 R------GGIRIRPGTLAVDALNLMQSRHITCVLVADG------DHLLGVVHMHDLLR 148 (149)
T ss_dssp E------SCCEECTTCBHHHHHHHHHHHTCSEEEEEET------TEEEEEEEHHHHTC
T ss_pred C------CCeEECCCCCHHHHHHHHHHcCCCEEEEecC------CEEEEEEEHHHhhc
Confidence 8 7899999999999999999999999999995 49999999999975
No 30
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=8.7e-17 Score=149.73 Aligned_cols=127 Identities=20% Similarity=0.159 Sum_probs=109.3
Q ss_pred hhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHH-HHHHHhhhcccccccchhhc
Q 004220 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE-FSKYAQAKTSRSKKLLVSEM 698 (767)
Q Consensus 620 ~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~-~l~~~~~~~~~~~~~~V~dv 698 (767)
.++.++|+++|++++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+ .+... ....+.+++++
T Consensus 4 ~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----~~~~~~~v~~~ 79 (133)
T 1y5h_A 4 PFTMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAG----LDPNTATAGEL 79 (133)
T ss_dssp ----CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGT----CCTTTSBHHHH
T ss_pred hhhhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcC----CCccccCHHHH
Confidence 45667999999999999999999999999999999999999998999999999999984 43211 12245789999
Q ss_pred cccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
|.+ ++.++++++++.+++++|.+++.+.+||+| +|+++|+||++|+++.+.+
T Consensus 80 m~~------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd------~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 80 ARD------SIYYVDANASIQEMLNVMEEHQVRRVPVIS------EHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp HTT------CCCCEETTCCHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHTCC-
T ss_pred hcC------CCEEECCCCCHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHh
Confidence 988 789999999999999999999999999999 5899999999999988754
No 31
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=151.13 Aligned_cols=137 Identities=17% Similarity=0.165 Sum_probs=112.2
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCC--CCcEEEEEehhhHHHHHHHHhhhcccccccchhhc
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~--~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dv 698 (767)
...++|+|+|++++.++++++++.+|++.|.+++.+.+||+|+ +++++|+||.+|+.+.............+.++.++
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~ 89 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDI 89 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHH
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhh
Confidence 4678999999999999999999999999999999999999996 79999999999999877432211111234578889
Q ss_pred cccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
|.++......+.++++++++.+++++|.+++.+.+||+| +|+++|+||++|+++.+.+.
T Consensus 90 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~l~Giit~~dil~~~~~~ 148 (164)
T 2pfi_A 90 LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS------RGRAVGCVSWVEMKKAISNL 148 (164)
T ss_dssp HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHHHHH
T ss_pred hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE------CCEEEEEEEHHHHHHHHHhh
Confidence 887211111168999999999999999999999999999 58999999999999987653
No 32
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.67 E-value=1.2e-15 Score=172.28 Aligned_cols=193 Identities=16% Similarity=0.177 Sum_probs=150.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---Cchh----HHHHHHHHHHHHHHH-HhcccccCCHHHHH
Q 004220 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNG---IPKA----VFPVMGGLAVGLIAL-MFPEILYWGFENVD 419 (767)
Q Consensus 348 ~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~~---~~~~----~~~~lggl~vg~i~~-~~P~~~g~G~~~i~ 419 (767)
..+...+++|+++|+++.+|.+++++..+++........ .+.| ..+++++++++.+.. +.|+..|+|.++++
T Consensus 34 ~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a~GsGip~v~ 113 (465)
T 1ots_A 34 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 113 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccccCCChHHHH
Confidence 446678999999999999999999988887765543221 0112 234455666665554 67999999999999
Q ss_pred HHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHHHHHHhhhcCCCccccccccccch
Q 004220 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (767)
Q Consensus 420 ~ll~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 499 (767)
..+++. .+.. .....+.|++.+.+++++|.|.|+++|++++||++|..+++.++.. +..+.
T Consensus 114 ~~l~~~---~~~~---~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l~-------------~~~~~ 174 (465)
T 1ots_A 114 GALEDQ---RPVR---WWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLK-------------GDEAR 174 (465)
T ss_dssp HHHTTC---SCCC---HHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTCC-------------SHHHH
T ss_pred HHHhCC---CCCC---cHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhccC-------------CHHHH
Confidence 888764 1222 2567889999999999999999999999999999999999987520 22456
Q ss_pred hHHHHHHHHHHHHHhcCchHHHHHHHHHHh-CCch--h--HHHHHHHHHHHHHHHhhhccCcchh
Q 004220 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDYR--I--VLPLLGAVGLSSWFTSGQMRRRDVK 559 (767)
Q Consensus 500 ~~~alvG~aA~la~~~~aPlt~~vi~~Elt-g~~~--~--~lP~~~a~~va~~v~~~~~~~~~~~ 559 (767)
..+..||+||.+|+++++|+++++|.+|.. ++++ . +.|.+++++++.++++.+...++.|
T Consensus 175 r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~G~~~~f 239 (465)
T 1ots_A 175 HTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALI 239 (465)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHHSCSCCSS
T ss_pred HHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence 889999999999999999999999999965 4433 4 8999999999998887665555444
No 33
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.67 E-value=3.1e-16 Score=158.15 Aligned_cols=122 Identities=16% Similarity=0.141 Sum_probs=111.2
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHc---CCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhh
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE---KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~---~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (767)
....+|+++|+++++++++++|+.+|++.|.++ +.+.+||+|++++++|+||.+|+... ..+.++++
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------~~~~~v~~ 120 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH----------EPHEPLIS 120 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS----------CTTSBGGG
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC----------CCcchHHH
Confidence 345689999999999999999999999999987 78999999999999999999998742 13567999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+|++ ++.++++++++.++++.|.+++.+.+||||+ +|+++|+||.+|+++.++++
T Consensus 121 im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-----~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 121 LLSE------DSRALTANTTLLDAAEAIEHSREIELPVIDD-----AGELIGRVTLRAATALVREH 175 (205)
T ss_dssp GCCS------SCCCEETTSCHHHHHHHHHTSSCSEEEEECT-----TSBEEEEEEHHHHHHHHHHH
T ss_pred HhcC------CCeEECCCCCHHHHHHHHHhcCCCEEEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 9988 7899999999999999999999999999997 89999999999999998765
No 34
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.66 E-value=4.8e-16 Score=145.15 Aligned_cols=123 Identities=20% Similarity=0.260 Sum_probs=108.8
Q ss_pred ccccccc---cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 625 FVSEVMR---TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 625 ~V~dvM~---~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
+|+|+|+ +++.++++++++.+|++.|.+++.+.+||+| +++++|+||.+|+.+..... .....+.+++++|++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~---~~~~~~~~v~~~m~~ 82 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLL---DKPVKDTQVKEIMTR 82 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGS---SSCGGGSBGGGTSBC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHc---CCCcccCCHHHhccC
Confidence 8999999 8999999999999999999999999999998 89999999999998643211 112356789999988
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++.++++++++.+++++|.+++.+.+||+| +|+++|+||++|+++.+.++
T Consensus 83 ------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 83 ------QVAYVDLNNTNEDCMALITEMRVRHLPVLD------DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp ------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHHC-
T ss_pred ------CCeEECCCCcHHHHHHHHHHhCCCEEEEEe------CCEEEEEEEHHHHHHHHHhc
Confidence 789999999999999999999999999999 58999999999999988654
No 35
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.66 E-value=1.9e-16 Score=152.40 Aligned_cols=132 Identities=14% Similarity=0.094 Sum_probs=112.9
Q ss_pred hhhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhh-hcccccccch
Q 004220 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-KTSRSKKLLV 695 (767)
Q Consensus 619 ~~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~-~~~~~~~~~V 695 (767)
..+..++|+++|++ ++.++++++++.+|++.|.+++.+.+||+|++++++|+||.+|+.+....... ......+.++
T Consensus 9 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v 88 (159)
T 1yav_A 9 DQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITV 88 (159)
T ss_dssp --CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBH
T ss_pred HHHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCH
Confidence 34667899999998 89999999999999999999999999999999999999999999987632110 0111356789
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++|.+ ++.++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++.+.++
T Consensus 89 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-----~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 89 EEVMLT------DIPRLHINDPIMKGFGMVINNGF--VCVEND-----EQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp HHHSBC------SCCEEETTSBHHHHHHHTTTCSE--EEEECT-----TCBEEEEEEHHHHHHHHHHH
T ss_pred HHhcCC------CCceEcCCCCHHHHHHHHHhCCE--EEEEeC-----CCeEEEEEEHHHHHHHHHHH
Confidence 999998 78999999999999999999877 999997 79999999999999987654
No 36
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.66 E-value=1.1e-15 Score=172.08 Aligned_cols=193 Identities=17% Similarity=0.215 Sum_probs=147.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCchhHHHHH-HHH---HHHHHH-HHhcccccCCHHHHH
Q 004220 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN---GIPKAVFPVM-GGL---AVGLIA-LMFPEILYWGFENVD 419 (767)
Q Consensus 348 ~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~l-ggl---~vg~i~-~~~P~~~g~G~~~i~ 419 (767)
..+...+++|+++|+++.+|..++++.++++....... +++.|+.+++ +++ +.+.+. .+.|+..|+|.++++
T Consensus 30 ~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsGIp~v~ 109 (466)
T 3nd0_A 30 RTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQIE 109 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCCHHHHH
Confidence 34667899999999999999999999888776553322 2222333332 222 222222 346899999999998
Q ss_pred HHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHHHHHHhhhcCCCccccccccccch
Q 004220 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (767)
Q Consensus 420 ~ll~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 499 (767)
..+++. .+.. .......|++.+.+|+++|.|.|+++|++++||++|..+++.++. +..+.
T Consensus 110 ~~l~g~---~~~~---~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~--------------~~~~~ 169 (466)
T 3nd0_A 110 GHLEGK---LPLV---WQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKA--------------TQENQ 169 (466)
T ss_dssp HHTTSS---SCCC---HHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTC--------------CHHHH
T ss_pred HHHcCC---CCCc---hHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCC--------------ChhHH
Confidence 888764 1222 245678899999999999999999999999999999999998763 22456
Q ss_pred hHHHHHHHHHHHHHhcCchHHHHHHHHHHh-CCc----hhHHHHHHHHHHHHHHHhhhccCcchhh
Q 004220 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDY----RIVLPLLGAVGLSSWFTSGQMRRRDVKE 560 (767)
Q Consensus 500 ~~~alvG~aA~la~~~~aPlt~~vi~~Elt-g~~----~~~lP~~~a~~va~~v~~~~~~~~~~~~ 560 (767)
..+..||+||.+|+++++|+++++|.+|.. +++ ..+.|.+++++++.+++..+..+++.|.
T Consensus 170 r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~f~ 235 (466)
T 3nd0_A 170 RILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMIRGQSAIIS 235 (466)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHHTCSSCSSC
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHHcCCCCcee
Confidence 889999999999999999999999999965 444 2367999999999998877665555544
No 37
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.66 E-value=1.5e-16 Score=153.10 Aligned_cols=119 Identities=16% Similarity=0.166 Sum_probs=107.1
Q ss_pred hhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCC-cEEEEEehhhHHHHHHHHhhhcccccccchh
Q 004220 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN-ILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (767)
Q Consensus 620 ~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g-~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (767)
.++..+|+|+|++ ++.++++++++.+|++.|.+++++.+||+|+++ +++|+||.+|+.+..... .+.+++
T Consensus 34 ~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~-------~~~~v~ 106 (156)
T 3oi8_A 34 DFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP-------EQFHLK 106 (156)
T ss_dssp HHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG-------GGCCHH
T ss_pred ccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC-------CcccHH
Confidence 4677899999997 799999999999999999999999999999874 999999999998764211 456799
Q ss_pred hccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHH
Q 004220 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 757 (767)
Q Consensus 697 dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl 757 (767)
++|++ +.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||++|++
T Consensus 107 ~im~~-------~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~g~~~Givt~~Dil 155 (156)
T 3oi8_A 107 SILRP-------AVFVPEGKSLTALLKEFREQRNHMAIVIDE-----YGGTSGLVTFEDII 155 (156)
T ss_dssp HHCBC-------CCEEETTSBHHHHHHHHHHTTCCEEEEECT-----TSSEEEEEEHHHHC
T ss_pred HHcCC-------CEEECCCCCHHHHHHHHHhcCCeEEEEECC-----CCCEEEEEEHHHhc
Confidence 99965 789999999999999999999999999997 89999999999986
No 38
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=1.7e-16 Score=155.49 Aligned_cols=129 Identities=22% Similarity=0.306 Sum_probs=110.3
Q ss_pred cCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHh----------------
Q 004220 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ---------------- 684 (767)
Q Consensus 623 ~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~---------------- 684 (767)
.++|+|+|++ ++.++++++++.+|++.|.+++++.+||+|++++++|+||.+|+.+......
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4689999999 8999999999999999999999999999999999999999999985321000
Q ss_pred -------hhcccccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHH
Q 004220 685 -------AKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 757 (767)
Q Consensus 685 -------~~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl 757 (767)
.......+.+++++|++ ++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dil 151 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTP------SPLVVRDSTNLEDAARLLLETKFRRLPVVDA-----DGKLIGILTRGNVV 151 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEE------SCCCEETTSBHHHHHHHHTTSTTCEEEEECT-----TCBEEEEEEHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCC------CceEeCCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEEHHHHH
Confidence 00012345679999998 7899999999999999999999999999997 89999999999999
Q ss_pred HHhhh
Q 004220 758 LACRF 762 (767)
Q Consensus 758 ~~~~~ 762 (767)
+.+.+
T Consensus 152 ~~~~~ 156 (180)
T 3sl7_A 152 RAALQ 156 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98754
No 39
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.66 E-value=3.4e-16 Score=150.07 Aligned_cols=132 Identities=16% Similarity=0.123 Sum_probs=111.4
Q ss_pred hhhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhh-hcccccccch
Q 004220 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-KTSRSKKLLV 695 (767)
Q Consensus 619 ~~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~-~~~~~~~~~V 695 (767)
..+..++|+++|++ ++.++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+....... ......+.++
T Consensus 6 ~~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v 85 (157)
T 2emq_A 6 NEFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKV 85 (157)
T ss_dssp ----CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBG
T ss_pred hhHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcH
Confidence 34678899999997 89999999999999999999999999999989999999999999976532100 0012346679
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++|.+ ++.++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++.+.+.
T Consensus 86 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-----~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 86 EEVMNR------NIPRLRLDDSLMKAVGLIVNHPF--VCVEND-----DGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GGTCBC------CCCEEETTSBHHHHHHHHHHSSE--EEEECS-----SSSEEEEEEHHHHHHHHHHT
T ss_pred HHHhCC------CCceecCCCcHHHHHHHHhhCCE--EEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 999988 78999999999999999999987 999997 79999999999999988654
No 40
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.66 E-value=8.3e-16 Score=146.90 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=114.0
Q ss_pred hhhhhhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccch
Q 004220 616 EVEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (767)
Q Consensus 616 ~~~~~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (767)
.....++.++|+++ +++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+.+...... ....+.++
T Consensus 15 ~~~~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~---~~~~~~~v 89 (152)
T 2uv4_A 15 FMSKSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT---YNNLDVSV 89 (152)
T ss_dssp HHTSBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSS---CCCTTSBG
T ss_pred HHHhhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchh---hhhhcchH
Confidence 44566788899998 88999999999999999999999999999999999999999999998764211 01235678
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
.++|.....+.+++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 90 ~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 90 TKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-----NDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp GGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHC-
T ss_pred HHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 8998621111126889999999999999999999999999997 7999999999999998754
No 41
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.65 E-value=6.4e-16 Score=152.18 Aligned_cols=134 Identities=19% Similarity=0.265 Sum_probs=113.7
Q ss_pred hhhhccCccccccccC----ceEE--eCCCCHHHHHHHHHHcCCcEEEEe--CCCCcEEEEEehhhHHHHHHHHhhhc--
Q 004220 618 EELKRRVFVSEVMRTR----YVTV--LMTTLLIEALTLMLAEKQSCAMIV--DNDNILIGLLTLGDIEEFSKYAQAKT-- 687 (767)
Q Consensus 618 ~~~l~~~~V~dvM~~~----~~~V--~~~~tl~eal~~m~~~~~~~lpVv--d~~g~lvGiVt~~dL~~~l~~~~~~~-- 687 (767)
++.++..+|+|+|+++ +.++ ++++++.+|++.|.+++++.+||+ |++++++|+||.+|+.+.+.......
T Consensus 5 ~~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 5 EEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp ----CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hhhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCC
Confidence 4567889999999987 7888 999999999999999999999999 78899999999999998875432100
Q ss_pred ------------------ccccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEE
Q 004220 688 ------------------SRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVG 749 (767)
Q Consensus 688 ------------------~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvG 749 (767)
....+.+++++|++ ++.++++++++.+|+++|.+++.+.+||+| +|+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd------~g~~vG 152 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL------SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH------NGRLLG 152 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCCCEECGGGEES------SCCEEETTSBHHHHHHHHHHHTCSEEEEEE------TTEEEE
T ss_pred ccccceeecccCCcccccccccCccHHHhhCc------CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE------CCEEEE
Confidence 11345678999987 789999999999999999999999999999 689999
Q ss_pred EEeHHHHHHHhhhc
Q 004220 750 LLDRESIILACRFC 763 (767)
Q Consensus 750 IVt~~DIl~~~~~~ 763 (767)
+||++|+++.+.+.
T Consensus 153 iit~~dll~~l~~~ 166 (185)
T 2j9l_A 153 IITKKDVLKHIAQM 166 (185)
T ss_dssp EEEHHHHHHHHHHH
T ss_pred EEEHHHHHHHHHHh
Confidence 99999999987644
No 42
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.65 E-value=1.1e-15 Score=149.85 Aligned_cols=125 Identities=13% Similarity=0.032 Sum_probs=109.5
Q ss_pred hhhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhhhcccccccch
Q 004220 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (767)
Q Consensus 619 ~~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (767)
..+..++|+++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+++..... .+.++
T Consensus 31 l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~-------~~~~v 103 (173)
T 3ocm_A 31 LTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE-------GRVRR 103 (173)
T ss_dssp HHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH-------SSCCG
T ss_pred hccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC-------Ccchh
Confidence 34677899999974 68999999999999999999999999999986 8999999999999886532 13456
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+ +| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+..+
T Consensus 104 ~-~~-~------~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-----~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 104 N-RL-R------DPIIVHESIGILRLMDTLKRSRGQLVLVADE-----FGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp G-GS-B------CCCEECGGGCHHHHHHHHHHSTTCCEEEECT-----TCCEEEEECHHHHHHHHHCC
T ss_pred H-hc-C------CCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-----CCCEEEEEeHHHHHHHHhCc
Confidence 6 44 4 5889999999999999999999999999997 89999999999999998654
No 43
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.65 E-value=8.2e-16 Score=151.99 Aligned_cols=125 Identities=14% Similarity=0.202 Sum_probs=112.1
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccCC
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~ 703 (767)
++|+++|+++++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+... .....+.+++++|++
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~---~~~~~~~~v~~im~~-- 83 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR---NKKPDEVPIRLVMRK-- 83 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG---CCCGGGSBGGGTSBS--
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc---ccCcccCCHHHHhCC--
Confidence 789999999999999999999999999999999999999889999999999999865321 112345679999988
Q ss_pred CCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 704 ~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
++.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 84 ----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 84 ----PIPKVKSDYDVKDVAAYLSENGLERCAVVDD-----PGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp ----SCCEEETTCBHHHHHHHHHHHTCSEEEEECT-----TCCEEEEEEHHHHTTTSCH
T ss_pred ----CCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHHHHHh
Confidence 7899999999999999999999999999997 7999999999999987655
No 44
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.65 E-value=8.8e-16 Score=147.55 Aligned_cols=133 Identities=21% Similarity=0.247 Sum_probs=113.9
Q ss_pred hhhhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcE-EEEeCCCCcEEEEEehhhHHHHHHHHh-----------h
Q 004220 618 EELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSC-AMIVDNDNILIGLLTLGDIEEFSKYAQ-----------A 685 (767)
Q Consensus 618 ~~~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~-lpVvd~~g~lvGiVt~~dL~~~l~~~~-----------~ 685 (767)
.+.....+|+++|++++.++++++++.+|++.|.+++.+. +||+|++ +++|+||.+|+.+...... .
T Consensus 10 ~~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~ 88 (157)
T 1o50_A 10 HHHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRS 88 (157)
T ss_dssp CTTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------
T ss_pred hhhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHH
Confidence 3456778999999999999999999999999999999999 9999987 9999999999998754210 0
Q ss_pred hcccccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 686 KTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 686 ~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
......+.+++++|++ +.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||++|+++.+.++
T Consensus 89 ~~~~~~~~~v~~im~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 89 SMKRLIAKNASEIMLD-------PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-----KGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp CCCCCSSCBHHHHCBC-------CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHS
T ss_pred HHHHHcCCcHHHHcCC-------CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-----CCEEEEEEEHHHHHHHHHHh
Confidence 0012346678898874 678999999999999999999999999997 78999999999999988654
No 45
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.64 E-value=6.4e-15 Score=165.32 Aligned_cols=193 Identities=15% Similarity=0.165 Sum_probs=146.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchh---HHHH----HHHHHHHHHH-HHhcccccCCHHHHH
Q 004220 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKA---VFPV----MGGLAVGLIA-LMFPEILYWGFENVD 419 (767)
Q Consensus 348 ~~l~~~illGii~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~---~~~~----lggl~vg~i~-~~~P~~~g~G~~~i~ 419 (767)
..+...+++|+++|+.+.+|..++++.++++...........+ ..+. +++++++.+. .+.|+..|+|.++++
T Consensus 19 ~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGip~v~ 98 (446)
T 4ene_A 19 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 98 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 4566789999999999999999999998877655433222211 1111 2233444343 346999999999998
Q ss_pred HHHccCCCccCccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHHHHHHHHHHHhhhcCCCccccccccccch
Q 004220 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (767)
Q Consensus 420 ~ll~~~~~~~~~~~~~l~~~~~~K~l~t~~t~gsG~~GG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 499 (767)
..+++. ..... ......|++.+.+|+++|.|.|+++|++++||++|..+++.++. +..+.
T Consensus 99 ~~l~~~---~~~~~---~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~--------------~~~~~ 158 (446)
T 4ene_A 99 GALEDQ---RPVRW---WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL--------------KGDEA 158 (446)
T ss_dssp HHHHTC---SCCCH---HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC--------------CSHHH
T ss_pred HHHhCC---Cccch---HHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCC--------------CHHHH
Confidence 888764 22331 45678999999999999999999999999999999999998763 12344
Q ss_pred h-HHHHHHHHHHHHHhcCchHHHHHHHHHHhC-Cc----hhHHHHHHHHHHHHHHHhhhccCcchhh
Q 004220 500 Q-AYGLVGMAATLAGVCQVPLTSVLLLFELTQ-DY----RIVLPLLGAVGLSSWFTSGQMRRRDVKE 560 (767)
Q Consensus 500 ~-~~alvG~aA~la~~~~aPlt~~vi~~Eltg-~~----~~~lP~~~a~~va~~v~~~~~~~~~~~~ 560 (767)
. .+..||+||.+|+++++|+++++|.+|... ++ ..+.|.+++++++.++++.+..+++.|+
T Consensus 159 r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~~~ 225 (446)
T 4ene_A 159 RHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALID 225 (446)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHHTTTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHcCCCceee
Confidence 4 899999999999999999999999999764 32 3589999999999998876655444443
No 46
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.64 E-value=1.6e-15 Score=142.65 Aligned_cols=134 Identities=20% Similarity=0.220 Sum_probs=109.1
Q ss_pred ccCcccc---ccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhc
Q 004220 622 RRVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (767)
Q Consensus 622 ~~~~V~d---vM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dv 698 (767)
.+.++++ +|.+++.++++++++.+|++.|.+++.+.+||+|++++++|+||.+|+.+.+.... ....+.+++++
T Consensus 6 ~~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---~~~~~~~v~~~ 82 (144)
T 2nyc_A 6 LKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI---YNDLSLSVGEA 82 (144)
T ss_dssp GGSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC-------CCSBHHHH
T ss_pred hhcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc---cccCCccHHHH
Confidence 3456667 88899999999999999999999999999999998999999999999998764211 11235678998
Q ss_pred cccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
|.+.+...+++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.++
T Consensus 83 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~l~~~ 142 (144)
T 2nyc_A 83 LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-----VGRLVGVLTLSDILKYILLG 142 (144)
T ss_dssp HHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHHC
T ss_pred HhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-----CCCEEEEEEHHHHHHHHHhc
Confidence 8751100014789999999999999999999999999997 79999999999999987653
No 47
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.64 E-value=1.8e-15 Score=156.90 Aligned_cols=137 Identities=18% Similarity=0.185 Sum_probs=107.9
Q ss_pred hhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC--CcEEEEEehhhHHHHHHHHhhhccc--------
Q 004220 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND--NILIGLLTLGDIEEFSKYAQAKTSR-------- 689 (767)
Q Consensus 620 ~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~--g~lvGiVt~~dL~~~l~~~~~~~~~-------- 689 (767)
....++|+|+|+++++++.+++++.++.++|.+++++.+||||++ ++++|+||++||.+++.........
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 567889999999999999999999999999999999999999974 6899999999999876533100000
Q ss_pred ----------------------cc--------------------c-----------------------------------
Q 004220 690 ----------------------SK--------------------K----------------------------------- 692 (767)
Q Consensus 690 ----------------------~~--------------------~----------------------------------- 692 (767)
.. +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 00 0
Q ss_pred --cchh-------hcccc-----CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH
Q 004220 693 --LLVS-------EMCSA-----DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 758 (767)
Q Consensus 693 --~~V~-------dvm~~-----~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~ 758 (767)
.... +.|.. ...+++.+.++.+++++.++.++|.+.+++++||++ +|+++||||++|+++
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~------~GrLVGIVTrkDl~k 242 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS------MGKLVGVVALAEIQA 242 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHH
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE------CCEEEEEEEHHHHHH
Confidence 0000 00111 012344899999999999999999999999999998 699999999999999
Q ss_pred Hhhh
Q 004220 759 ACRF 762 (767)
Q Consensus 759 ~~~~ 762 (767)
++..
T Consensus 243 ai~~ 246 (250)
T 2d4z_A 243 AIEG 246 (250)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 9864
No 48
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.62 E-value=9.8e-16 Score=158.56 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=105.1
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhc---------------
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT--------------- 687 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~--------------- 687 (767)
..+|+|+|++++.++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+.......
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999998874211000
Q ss_pred --------------------------------------------------------------------------------
Q 004220 688 -------------------------------------------------------------------------------- 687 (767)
Q Consensus 688 -------------------------------------------------------------------------------- 687 (767)
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~ 165 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNI 165 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTC
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCC
Confidence
Q ss_pred --------------ccccccchhhccc-cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEe
Q 004220 688 --------------SRSKKLLVSEMCS-ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLD 752 (767)
Q Consensus 688 --------------~~~~~~~V~dvm~-~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt 752 (767)
....+.+++++|+ + ++.++++++++.++.++|.+++++.+||+|+ +|+++|+||
T Consensus 166 ~~i~t~~d~~~~~~~~~~~~~v~~im~~~------~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~~~~Giit 234 (245)
T 3l2b_A 166 TVITTPHDSFTASRLIVQSLPVDYVMTKD------NLVAVSTDDLVEDVKVTMSETRYSNYPVIDE-----NNKVVGSIA 234 (245)
T ss_dssp EEEECSSCHHHHHHHGGGGSBHHHHSBCT------TCCCEETTSBHHHHHHHHHHHCCSEEEEECT-----TCBEEEEEE
T ss_pred eEEEeCCChHHHHHHHhcCCceeeEecCC------ccEEECCCCcHHHHHHHHHhcCCceEEEEcC-----CCeEEEEEE
Confidence 0012356888888 6 7899999999999999999999999999997 899999999
Q ss_pred HHHHHHHhhh
Q 004220 753 RESIILACRF 762 (767)
Q Consensus 753 ~~DIl~~~~~ 762 (767)
++|+++..++
T Consensus 235 ~~dll~~~~~ 244 (245)
T 3l2b_A 235 RFHLISTHKK 244 (245)
T ss_dssp CC--------
T ss_pred HHHhhchhhc
Confidence 9999998765
No 49
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.62 E-value=2.4e-15 Score=144.33 Aligned_cols=124 Identities=20% Similarity=0.295 Sum_probs=109.3
Q ss_pred Cccccccc------cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhh
Q 004220 624 VFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (767)
Q Consensus 624 ~~V~dvM~------~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (767)
.+|+|+|+ +++.++++++++.+|++.|.+++++.+||+| +++++|+||.+|+.+.+.... ....+.++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~---~~~~~~~v~~ 82 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQE---RSSKATRVEE 82 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGT---CCSSSCBHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhcc---CCccccCHHH
Confidence 57999999 4569999999999999999999999999965 899999999999998764221 1234678999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+|++ ++.++++++++.+++++|.+++.+.+||+| +|+++|+||++|+++.+.++
T Consensus 83 ~m~~------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 83 IMTA------KVRYVEPSQSTDECMALMTEHRMRHLPVLD------GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp HSBS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHHTT
T ss_pred HcCC------CCcEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHHH
Confidence 9998 789999999999999999999999999999 68999999999999998654
No 50
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.59 E-value=4.7e-15 Score=150.34 Aligned_cols=120 Identities=18% Similarity=0.144 Sum_probs=108.8
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
...+++++|.+++.++++++|+.+|++.|.+++.+.+||+|++++++|+||.+|+.+.. .+.+++++|++
T Consensus 11 ~~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~----------~~~~v~~im~~ 80 (213)
T 1vr9_A 11 HHMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLD----------LDSSVFNKVSL 80 (213)
T ss_dssp --CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSC----------TTSBSGGGCBC
T ss_pred cccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhc----------CCCcHHHHccC
Confidence 34578999999999999999999999999999999999999889999999999998643 24579999988
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
++.++++++++.+|+++|.+++++.+||+|+ +|+++|+||.+|+++.+..
T Consensus 81 ------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 81 ------PDFFVHEEDNITHALLLFLEHQEPYLPVVDE-----EMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp ------TTCCEETTSBHHHHHHHHHHCCCSEEEEECT-----TCBEEEEEEHHHHHHHHHH
T ss_pred ------CCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHH
Confidence 7899999999999999999999999999997 7999999999999998754
No 51
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.57 E-value=9.1e-15 Score=155.23 Aligned_cols=131 Identities=17% Similarity=0.157 Sum_probs=115.5
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhh--cccccccchhhcc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK--TSRSKKLLVSEMC 699 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~--~~~~~~~~V~dvm 699 (767)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+...... .....+.+++++|
T Consensus 154 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m 233 (296)
T 3ddj_A 154 EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVM 233 (296)
T ss_dssp CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHS
T ss_pred ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHh
Confidence 45689999999999999999999999999999999999999999999999999999887632211 0122456799999
Q ss_pred ccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++ ++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||++|+++++.++
T Consensus 234 ~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 234 VT------NLVTIDELASVNRAAAEMIVKRIGSLLILNK-----DNTIRGIITERDLLIALHHI 286 (296)
T ss_dssp BC------CCCBCCTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHH
T ss_pred CC------CCeEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEcHHHHHHHHHHH
Confidence 98 7899999999999999999999999999997 89999999999999988654
No 52
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.57 E-value=5.4e-15 Score=156.84 Aligned_cols=121 Identities=17% Similarity=0.250 Sum_probs=110.7
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHc-----CCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchh
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~-----~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (767)
...+|+++|+++++++++++|+.++++.|.++ +++.+||+|++++++|+||.+|+.+. ..+.+++
T Consensus 135 ~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~----------~~~~~v~ 204 (286)
T 2oux_A 135 EDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN----------DDDTLIA 204 (286)
T ss_dssp CTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS----------CTTSBHH
T ss_pred ChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC----------CCCCcHH
Confidence 45689999999999999999999999999987 78889999999999999999999753 1356799
Q ss_pred hccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 697 dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++|++ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||.+|+++.+.++
T Consensus 205 ~im~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 205 DILNE------RVISVHVGDDQEDVAQTIRDYDFLAVPVTDY-----DDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp HHSBS------CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHHH
T ss_pred HHcCC------CCeeecCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 99988 7899999999999999999999999999997 89999999999999988765
No 53
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.55 E-value=1.6e-14 Score=152.63 Aligned_cols=122 Identities=21% Similarity=0.263 Sum_probs=108.9
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHc-----CCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccch
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~-----~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (767)
....+++++|+++++++++++++.++++.|.++ +.+.+||+|++++++|+||.+|+... ..+.++
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~----------~~~~~v 201 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----------DPRTRV 201 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS----------CTTCBS
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC----------CCCCcH
Confidence 345689999999999999999999999999987 68999999999999999999999853 135679
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++|++ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||.+|+++.+.++
T Consensus 202 ~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 202 AEIMNP------KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-----EGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp TTTSBS------SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHC---
T ss_pred HHHhCC------CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-----CCeEEEEEEHHHHHHHHHHH
Confidence 999987 7899999999999999999999999999997 89999999999999988765
No 54
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.54 E-value=5.6e-14 Score=151.03 Aligned_cols=135 Identities=20% Similarity=0.206 Sum_probs=115.7
Q ss_pred hccCccccc---cccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhh
Q 004220 621 KRRVFVSEV---MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (767)
Q Consensus 621 l~~~~V~dv---M~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (767)
....+++++ |++++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+..... ...+.++++
T Consensus 184 ~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~---~~~~~~v~~ 260 (323)
T 3t4n_C 184 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY---NDLSLSVGE 260 (323)
T ss_dssp GCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHH---HHTTSBHHH
T ss_pred hhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchh---hhccCCHHH
Confidence 345689999 99999999999999999999999999999999999999999999999998753221 123567999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+|++.+...+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+..+
T Consensus 261 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 261 ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-----VGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT-----TSBEEEEEEHHHHHHHHHHC
T ss_pred HHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC-----CCcEEEEEEHHHHHHHHHhc
Confidence 99863222225789999999999999999999999999997 89999999999999988643
No 55
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.52 E-value=2.9e-14 Score=149.95 Aligned_cols=130 Identities=22% Similarity=0.287 Sum_probs=109.7
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHH------HHHH------HH------
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE------EFSK------YA------ 683 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~------~~l~------~~------ 683 (767)
...+++++|.+++.++++++++.++.+.|.+++.+.+||+|++++++|++|.+|+. +.+. ..
T Consensus 124 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (282)
T 2yzq_A 124 KGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWIL 203 (282)
T ss_dssp GGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC-----------------
T ss_pred ccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhc
Confidence 35689999999999999999999999999999999999999899999999999998 4442 00
Q ss_pred -h-------hhcccccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHH
Q 004220 684 -Q-------AKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRES 755 (767)
Q Consensus 684 -~-------~~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~D 755 (767)
. .......+.+++++|++ ++.++++++++.+|+++|.+++++++||+|+ +|+++|+||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~~~lvGiit~~D 272 (282)
T 2yzq_A 204 ESHPTLLFEKFELQLPNKPVAEIMTR------DVIVATPHMTVHEVALKMAKYSIEQLPVIRG-----EGDLIGLIRDFD 272 (282)
T ss_dssp ---------------CCCBGGGTCBS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEET-----TTEEEEEEEHHH
T ss_pred ccchHHHHhHhhhhhccCCHHHhcCC------CCceeCCCCCHHHHHHHHHHcCcceeEEECC-----CCCEEEEEeHHH
Confidence 0 00012346789999988 8999999999999999999999999999996 789999999999
Q ss_pred HHHHhhh
Q 004220 756 IILACRF 762 (767)
Q Consensus 756 Il~~~~~ 762 (767)
+++.+.+
T Consensus 273 il~~~~~ 279 (282)
T 2yzq_A 273 LLKVLVK 279 (282)
T ss_dssp HGGGGCC
T ss_pred HHHHHHh
Confidence 9988754
No 56
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.51 E-value=4.4e-14 Score=162.53 Aligned_cols=133 Identities=12% Similarity=0.060 Sum_probs=114.2
Q ss_pred hhhhccCccccccccCceEEeCC-CCHHHHHHHHHHcCCcEEEEeC-CCCcEEEEEehhhHHHHHHHHhhhcccccccch
Q 004220 618 EELKRRVFVSEVMRTRYVTVLMT-TLLIEALTLMLAEKQSCAMIVD-NDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLV 695 (767)
Q Consensus 618 ~~~l~~~~V~dvM~~~~~~V~~~-~tl~eal~~m~~~~~~~lpVvd-~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V 695 (767)
+..+...+|+|+|+++++++.++ +|+.++++.|.+++++.+||+| ++++++|+||.+||++.+.... ...+.++
T Consensus 378 ~~~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~----~~~~~~V 453 (527)
T 3pc3_A 378 GHWWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN----RQQSDPA 453 (527)
T ss_dssp CCTTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC----CCTTSBG
T ss_pred cccccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc----CcCCCcH
Confidence 34577889999999999999999 9999999999999999999999 7899999999999998875421 2346689
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
+++|++ ++.++++++++.+++++|.++++ +||||++ +..+|+++||||++||++.+.+.
T Consensus 454 ~~im~~------~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~-~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 454 IKALNK------RVIRLNESEILGKLARVLEVDPS--VLILGKN-PAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp GGGEET------TCCEEETTSBHHHHHHHHTTCSE--EEEEEEC-SSSCEEEEEEEEHHHHHHHHHTC
T ss_pred HHHhcC------CCeEECCCCcHHHHHHHHhhCCE--EEEEeCC-cccCCeEEEEEEHHHHHHHHHhc
Confidence 999988 89999999999999999987765 7999960 00028999999999999998754
No 57
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.50 E-value=5.3e-14 Score=147.48 Aligned_cols=126 Identities=14% Similarity=0.160 Sum_probs=110.1
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhc-------ccccccch
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT-------SRSKKLLV 695 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~-------~~~~~~~V 695 (767)
..+++++|++++.++++++++.++++.|.+++.+.+||+ ++|+++|+||.+|+.+.+....... ....+.++
T Consensus 147 ~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v 225 (280)
T 3kh5_A 147 NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRM 225 (280)
T ss_dssp TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBH
T ss_pred CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcH
Confidence 358999999999999999999999999999999999999 5899999999999998874321100 11245679
Q ss_pred hhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHh
Q 004220 696 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (767)
Q Consensus 696 ~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~ 760 (767)
+++|++ ++.++++++++.+|++.|.+++.+++||+|+ +|+++|+||++|+++++
T Consensus 226 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 226 EEIMKR------DVITAKEGDKLKKIAEIMVTNDIGALPVVDE-----NLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHHSBS------SCCCBCTTCBHHHHHHHHHHHTCCEEEEECT-----TCBEEEEEEHHHHGGGG
T ss_pred HHHhcC------CCEEECCCCCHHHHHHHHHHCCCCEEEEECC-----CCeEEEEEeHHHHHHhh
Confidence 999988 7899999999999999999999999999997 78999999999998765
No 58
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.50 E-value=1.4e-13 Score=144.13 Aligned_cols=122 Identities=25% Similarity=0.303 Sum_probs=110.1
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccC
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~ 702 (767)
+.+++++|++++.++++++++.++++.|.+++++.+||+|++|+++|++|.+|+.+.+.... ..+.+++++|++
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~-----~~~~~v~~~m~~- 156 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI-----DENEVIDDYITR- 156 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS-----CTTCBSGGGCBC-
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC-----CCCCCHHHHhCC-
Confidence 56899999999999999999999999999999999999999999999999999998764221 234478999987
Q ss_pred CCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 703 ~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
++.++++++++.++++.|.+++.+.+||++ +|+++|+||.+|+++.+.
T Consensus 157 -----~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~------~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 157 -----DVIVATPGERLKDVARTMVRNGFRRLPVVS------EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp -----SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHT
T ss_pred -----CCeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHh
Confidence 789999999999999999999999999995 789999999999998874
No 59
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.49 E-value=7.7e-14 Score=148.03 Aligned_cols=123 Identities=21% Similarity=0.232 Sum_probs=111.7
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
...+++++|++++.++.+++++.++++.|.+++++.+||+|++++++|++|.+|+.+.+. ....+.+++++|++
T Consensus 91 ~~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~------~~~~~~~v~~~m~~ 164 (296)
T 3ddj_A 91 STTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYK------DLDEIFPVKVFMST 164 (296)
T ss_dssp HTSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGG------GSCCCCBHHHHSBC
T ss_pred hcccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhh------cccccccHHHhhcC
Confidence 357899999999999999999999999999999999999999999999999999987653 12245589999987
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||.+|+++.+.
T Consensus 165 ------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 165 ------KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD-----DNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp ------SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHH
T ss_pred ------CCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHH
Confidence 7899999999999999999999999999997 899999999999998865
No 60
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.48 E-value=7.6e-14 Score=158.09 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=109.8
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHc-----CCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchh
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVS 696 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~-----~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~ 696 (767)
...+++++|+++++++++++|+.++++.|+++ +.+.+||+|++++++|+||.+|+... ..+.+++
T Consensus 153 ~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~----------~~~~~v~ 222 (473)
T 2zy9_A 153 EEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA----------DPRTRVA 222 (473)
T ss_dssp CTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS----------CTTSBGG
T ss_pred CCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC----------CCCCcHH
Confidence 45689999999999999999999999999986 47899999999999999999999853 1456799
Q ss_pred hccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 697 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 697 dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
++|++ ++.+++++++++++.+.|.+++.+.+||||+ +|+++|+||.+|+++.+.++
T Consensus 223 dim~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-----~g~lvGiIT~~Dil~~i~~e 278 (473)
T 2zy9_A 223 EIMNP------KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-----EGRLVGIVTVDDVLDVLEAE 278 (473)
T ss_dssp GTSBS------SCCCEESSSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHHH
T ss_pred HHhCC------CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-----CCEEEEEEehHhhHHHHHHH
Confidence 99987 7899999999999999999999999999997 89999999999999987654
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.47 E-value=3.2e-13 Score=145.76 Aligned_cols=134 Identities=17% Similarity=0.137 Sum_probs=112.5
Q ss_pred ccCcccc---ccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhc
Q 004220 622 RRVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (767)
Q Consensus 622 ~~~~V~d---vM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dv 698 (767)
...++++ +|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ....+.+++++
T Consensus 180 ~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~---~~~~~~~v~~~ 256 (334)
T 2qrd_G 180 LRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGD---YSNLDLSVGEA 256 (334)
T ss_dssp CCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSC---GGGGGSBHHHH
T ss_pred hhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccc---cccccCcHHHH
Confidence 3467888 58999999999999999999999999999999998899999999999998764211 11235678999
Q ss_pred cccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 699 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 699 m~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
|++.....+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+.++
T Consensus 257 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 257 LLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE-----NLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp HTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT-----TCBEEEEEEHHHHHHHHHSC
T ss_pred HhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEeHHHHHHHHHhc
Confidence 9831000026889999999999999999999999999997 79999999999999988654
No 62
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.45 E-value=1.1e-13 Score=145.38 Aligned_cols=117 Identities=23% Similarity=0.227 Sum_probs=89.4
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccCC
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~ 703 (767)
++|+++|++++.++++++|+.+|++.|.+++++.+||+|++|+++|+++.+|+.+.. .+.+++++|.+
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~----------~~~~v~~~m~~-- 68 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNP----------DEEQLAMLVKR-- 68 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC--------------------CCCBS--
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhh----------ccCCHHHHcCC--
Confidence 478999999999999999999999999999999999999889999999999998654 24568899987
Q ss_pred CCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHH-Hhh
Q 004220 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL-ACR 761 (767)
Q Consensus 704 ~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~-~~~ 761 (767)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|++|.+|+++ .+.
T Consensus 69 ----~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 69 ----DVPVVKENDTLKKAAKLMLEYDYRRVVVVDS-----KGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp ----CCCEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHTTT
T ss_pred ----CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHh
Confidence 7889999999999999999999999999997 789999999999998 654
No 63
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.41 E-value=9.3e-13 Score=141.99 Aligned_cols=136 Identities=13% Similarity=0.171 Sum_probs=112.3
Q ss_pred hhhhhhccCcccccc--ccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHh-hhc---c
Q 004220 616 EVEELKRRVFVSEVM--RTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQ-AKT---S 688 (767)
Q Consensus 616 ~~~~~l~~~~V~dvM--~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~-~~~---~ 688 (767)
.-++.++..+|+|+| ++++.++++++++.+|++.|.+++++.+||+|++ ++++|++|.+|+.+.+.... ... .
T Consensus 27 ~~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~ 106 (330)
T 2v8q_E 27 VYTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIY 106 (330)
T ss_dssp HHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchh
Confidence 456678889999999 6789999999999999999999999999999987 78999999999998765321 100 1
Q ss_pred cccccc-------hhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 689 RSKKLL-------VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 689 ~~~~~~-------V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
...+.. ++++|.+ ++.++++++++.++++.|.+++.+.+||+|++ +|+++|+||.+|+++...
T Consensus 107 ~l~~~~~~~~~~~~~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----~~~~~Givt~~dl~~~~~ 176 (330)
T 2v8q_E 107 ELEEHKIETWREVYLQDSFK------PLVCISPNASLFDAVSSLIRNKIHRLPVIDPE----SGNTLYILTHKRILKFLK 176 (330)
T ss_dssp CGGGCBHHHHHHHHSSSSCC------CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTT----TCCEEEEECHHHHHHHHH
T ss_pred HHhhccHHHHHHHHhhcccC------CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCC----CCcEEEEEcHHHHHHHHH
Confidence 111222 3456766 78999999999999999999999999999941 479999999999998764
No 64
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.39 E-value=1.3e-12 Score=140.82 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=109.2
Q ss_pred Cccccc--cc-cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 624 VFVSEV--MR-TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 624 ~~V~dv--M~-~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
.+++++ |+ +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+...... ....+.++.++|.
T Consensus 190 ~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~---~~~~~~~v~~~~~ 266 (330)
T 2v8q_E 190 KSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT---YNNLDVSVTKALQ 266 (330)
T ss_dssp SBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSC---CCCCSSBHHHHGG
T ss_pred CCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccc---cccccCcHHHHHh
Confidence 455555 55 78999999999999999999999999999998999999999999987653110 1112567888885
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
....+.+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+.++
T Consensus 267 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 267 HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE-----HDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHSS
T ss_pred ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC-----CCcEEEEEeHHHHHHHHHhh
Confidence 32222337899999999999999999999999999997 79999999999999988654
No 65
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.39 E-value=9.3e-13 Score=141.46 Aligned_cols=127 Identities=15% Similarity=0.192 Sum_probs=106.2
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCc-----EEEEEehhhHHHHHHHHhhhcccccccchhhc
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNI-----LIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEM 698 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~-----lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dv 698 (767)
+++.++|.+++.++++++++.++++.|.+++.+.+||+|++++ ++|++|.+|+.+.+...... ....+.+++++
T Consensus 114 ~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~-~~~~~~~v~~~ 192 (323)
T 3t4n_C 114 ERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRE-THFLKIPIGDL 192 (323)
T ss_dssp HHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGG-GGGCCSBGGGT
T ss_pred HHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCc-hhhhhCcHHHc
Confidence 3456677889999999999999999999999999999998775 99999999999987543221 23345678898
Q ss_pred ---cccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 699 ---CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 699 ---m~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
|++ ++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 193 ~~~m~~------~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 193 NIITQD------NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-----NGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp TCSBCT------TCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEETTHHHHHHHT
T ss_pred CCCCCC------CcEEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEeHHHHHHHHhh
Confidence 766 7899999999999999999999999999997 8999999999999987654
No 66
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.37 E-value=1.5e-12 Score=148.37 Aligned_cols=124 Identities=19% Similarity=0.236 Sum_probs=110.1
Q ss_pred hhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCC--CCcEEEEEehhhHHHHHHHHhhhcccccccchhh
Q 004220 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSE 697 (767)
Q Consensus 620 ~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~--~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~d 697 (767)
..+-++.++.|.+++.++++++|+.|+++.|.+++++.+||+|+ +++++|+||.+|++. ....+.++++
T Consensus 109 V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~---------~~~~~~~V~~ 179 (511)
T 3usb_A 109 VDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRF---------IQDYSIKISD 179 (511)
T ss_dssp HHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTT---------CCCSSSBHHH
T ss_pred HHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhh---------hccCCCcHHH
Confidence 34445677889999999999999999999999999999999998 899999999999974 1224677999
Q ss_pred ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 698 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 698 vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+|++ .++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++....
T Consensus 180 vM~~-----~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-----~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 180 VMTK-----EQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-----NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp HCCC-----CCCCCEETTCCHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred hccc-----CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-----CCCEeeeccHHHHHHhhhc
Confidence 9984 25789999999999999999999999999998 8999999999999998865
No 67
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.31 E-value=5.1e-13 Score=151.69 Aligned_cols=120 Identities=18% Similarity=0.105 Sum_probs=94.1
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc-cC
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS-AD 702 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~-~~ 702 (767)
.+++++|+++++++++++|+.|+++.|.+++++.+||+|++++++|+||.+|++.. ...+.+++++|+ +
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~---------~~~~~~v~diM~p~- 158 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV---------TDLTKSVAAVMTPK- 158 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC---------CCTTSBGGGTSEEG-
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc---------ccCCCcHHHHhcCC-
Confidence 46788999999999999999999999999999999999999999999999999621 224667999998 3
Q ss_pred CCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 703 ~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
.++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++..+.
T Consensus 159 ----~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-----~G~l~GiIT~~DIl~~~~~ 209 (496)
T 4fxs_A 159 ----ERLATVKEGATGAEVQEKMHKARVEKILVVND-----EFQLKGMITAKDFHKAESK 209 (496)
T ss_dssp ----GGCCEEECC----CGGGTCC---CCCEEEECT-----TSBCCEEECCC-----CCC
T ss_pred ----CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCCEEEeehHhHHHHhhcc
Confidence 13889999999999999999999999999998 8999999999999987643
No 68
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.30 E-value=1.5e-11 Score=132.59 Aligned_cols=135 Identities=21% Similarity=0.322 Sum_probs=107.6
Q ss_pred hhhhhhccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC-CcEEEEEehhhHHHHHHHHhh---hcc-
Q 004220 616 EVEELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQA---KTS- 688 (767)
Q Consensus 616 ~~~~~l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~-g~lvGiVt~~dL~~~l~~~~~---~~~- 688 (767)
+..++++..+|+|+|++ +++++++++|+.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+..... ...
T Consensus 14 ~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~~~~~~~~~~~~ 93 (334)
T 2qrd_G 14 EIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIKYYYQSSSFPEA 93 (334)
T ss_dssp HHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHHHHHHHCSCGGG
T ss_pred HHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHHHHhhccCCccH
Confidence 33456778999999976 57888999999999999999999999999976 899999999999987643211 010
Q ss_pred --cccccchh-------hccccCCCCccCC--eEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC-e----EEEEEe
Q 004220 689 --RSKKLLVS-------EMCSADGETCCVP--CTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG-Q----LVGLLD 752 (767)
Q Consensus 689 --~~~~~~V~-------dvm~~~~~~~~~~--~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g-~----lvGIVt 752 (767)
...+..++ ++|.+ ++ .++.+++++.++++.|.+++.+++||+|+ ++ + ++|+||
T Consensus 94 ~~~~~~~~~~~i~~~l~~im~~------~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~~~~Givt 162 (334)
T 2qrd_G 94 IAEIDKFRLLGLREVERKIGAI------PPETIYVHPMHSLMDACLAMSKSRARRIPLIDV-----DGETGSEMIVSVLT 162 (334)
T ss_dssp GGGGGSCBHHHHHHHHHHHTCS------CSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEE-----ETTTTEEEEEEEEE
T ss_pred HHHHhhhchhhHHHHHHhhccC------CCceeeeCCCCcHHHHHHHHHHCCceEEEEEeC-----CCCcCccceEEEee
Confidence 11122232 33554 45 89999999999999999999999999997 44 4 999999
Q ss_pred HHHHHHHhh
Q 004220 753 RESIILACR 761 (767)
Q Consensus 753 ~~DIl~~~~ 761 (767)
.+|+++...
T Consensus 163 ~~dl~~~~~ 171 (334)
T 2qrd_G 163 QYRILKFIS 171 (334)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.30 E-value=1.9e-13 Score=155.82 Aligned_cols=125 Identities=16% Similarity=0.146 Sum_probs=6.2
Q ss_pred hhhccCccccc-cccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCC---CcEEEEEehhhHHHHHHHHhhhcccccccc
Q 004220 619 ELKRRVFVSEV-MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND---NILIGLLTLGDIEEFSKYAQAKTSRSKKLL 694 (767)
Q Consensus 619 ~~l~~~~V~dv-M~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~---g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~ 694 (767)
...++++..++ |+++++++++++|+.|+++.|.+++++.+||+|++ ++++|+||.+|+++. . ...+.+
T Consensus 91 ~~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~-------~~~~~~ 162 (503)
T 1me8_A 91 AMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L-------TQTETK 162 (503)
T ss_dssp HHHHHHHTTTC---------------------------------------------------------------------
T ss_pred HHHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h-------ccccCc
Confidence 34455566666 99999999999999999999999999999999987 899999999999864 1 124567
Q ss_pred hhhccccCCCCccC--CeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 695 VSEMCSADGETCCV--PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 695 V~dvm~~~~~~~~~--~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
++++|++ + +.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+..
T Consensus 163 V~diM~~------~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-----~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 163 VSDMMTP------FSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD-----DQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp ----------------------------------------------------------------------
T ss_pred HHHHhCC------CCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-----CCeEEEEEEecHHHHhhhc
Confidence 9999987 5 899999999999999999999999999998 8999999999999998754
No 70
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.28 E-value=1.2e-11 Score=141.03 Aligned_cols=120 Identities=22% Similarity=0.208 Sum_probs=107.8
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeC--CCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVD--NDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd--~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
.+++++|++++.++++++++.++++.|.+++++.+||+| ++++++|+||.+|+++.. ..+.+++++|++
T Consensus 90 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~---------~~~~~v~~im~~ 160 (491)
T 1zfj_A 90 KRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS---------DYNAPISEHMTS 160 (491)
T ss_dssp HHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS---------CSSSBTTTSCCC
T ss_pred hhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc---------cCCCcHHHHcCC
Confidence 357899999999999999999999999999999999999 789999999999998531 145678999974
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
.++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.+
T Consensus 161 -----~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-----~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 161 -----EHLVTAAVGTDLETAERILHEHRIEKLPLVDN-----SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -----SCCCCEETTCCHHHHHHHHHHTTCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred -----CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEEHHHHHHHHhc
Confidence 14789999999999999999999999999998 8999999999999998874
No 71
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.25 E-value=5.2e-13 Score=151.53 Aligned_cols=121 Identities=21% Similarity=0.090 Sum_probs=4.6
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
+..+++++|.+++.++++++|+.|+++.|.+++++.+||+| +++++|+||.+|++... ..+.+++++|++
T Consensus 86 ~vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~---------~~~~~V~~vMtp 155 (490)
T 4avf_A 86 KVKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP---------NAGDTVAAIMTP 155 (490)
T ss_dssp HHHHCCC-------------------------------------------------------------------------
T ss_pred hhcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc---------ccCCcHHHHhcc
Confidence 33578899999999999999999999999999999999999 89999999999996422 235679999983
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
..++.++++++++.+++++|.+++++.+||||+ +|+++|+||++|+++..+
T Consensus 156 ----~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-----~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 156 ----KDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-----NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ------------------------------------------------------------
T ss_pred ----CCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEehHHhhhhcc
Confidence 014889999999999999999999999999998 899999999999999864
No 72
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.24 E-value=7.7e-13 Score=150.97 Aligned_cols=123 Identities=21% Similarity=0.236 Sum_probs=8.3
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccC
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~ 702 (767)
-.+++++|+++++++++++++.++++.|.+++++.+||+|++++++|+||.+|+++.. ..+.+++++|++
T Consensus 94 v~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~---------~~~~~v~~im~~- 163 (494)
T 1vrd_A 94 VKKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK---------NLSKKIKDLMTP- 163 (494)
T ss_dssp HHTC----------------------------------------------------------------------------
T ss_pred hhhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc---------CCCCcHHHHhCC-
Confidence 3468899999999999999999999999999999999999889999999999998631 135678999974
Q ss_pred CCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhhc
Q 004220 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 763 (767)
Q Consensus 703 ~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~~ 763 (767)
.+++.++++++++.+++++|.+++++.+||||+ +|+++|+||++|+++.....
T Consensus 164 ---~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 164 ---REKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-----DNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -----------------------------------------------------CHHHHTCT
T ss_pred ---CCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHhhhccc
Confidence 125789999999999999999999999999998 89999999999999987643
No 73
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.21 E-value=1.3e-12 Score=145.13 Aligned_cols=114 Identities=17% Similarity=0.188 Sum_probs=0.9
Q ss_pred ccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCC---CCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccCC
Q 004220 627 SEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (767)
Q Consensus 627 ~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~---~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~ 703 (767)
+..|..+++++.|++|+.|+.++|.+++++.+||+|+ +++++|+||.+|++.. . .+.+++++|++
T Consensus 141 e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~-d---------~~~~V~evMT~-- 208 (556)
T 4af0_A 141 ENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ-D---------AETPIKSVMTT-- 208 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc-c---------cceEhhhhccc--
Confidence 4467789999999999999999999999999999986 6899999999998742 1 34679999998
Q ss_pred CCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 704 ~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
++++++++.++++|.++|.++++..+||||+ +++++|+||++|+.+..+
T Consensus 209 ----~lvt~~~~~~leeA~~iL~~~kieklpVVd~-----~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 209 ----EVVTGSSPITLEKANSLLRETKKGKLPIVDS-----NGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------------------------------------------------
T ss_pred ----ceEEecCCCCHHHHHHHHHHccccceeEEcc-----CCcEEEEEEechhhhhhh
Confidence 7999999999999999999999999999998 899999999999998654
No 74
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.06 E-value=3.6e-12 Score=146.08 Aligned_cols=122 Identities=18% Similarity=0.214 Sum_probs=72.3
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCC---CCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~---~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
.+++++|.+++.++++++++.++++.|.+++++.+||+|+ +++++|+||.+|+++... ...+.+++++|+
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~-------~~~~~~v~~vm~ 180 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE-------KDHTTLLSEVMT 180 (514)
T ss_dssp HTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC-----------------------
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh-------ccCCCCHHHHhC
Confidence 4788999999999999999999999999999999999998 589999999999976421 123456888887
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
+ ..++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.
T Consensus 181 ~----~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 181 P----RIELVVAPAGVTLKEANEILQRSKKGKLPIVND-----CDELVAIIARTDLKKNRD 232 (514)
T ss_dssp C----CBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-----SSCCC----CCCCSSCCC
T ss_pred C----CCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-----CCeEEEEEEHHHHHHHhh
Confidence 4 125789999999999999999999999999997 899999999999987654
No 75
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.05 E-value=1.7e-11 Score=139.49 Aligned_cols=115 Identities=23% Similarity=0.328 Sum_probs=2.8
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccCC
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADG 703 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~ 703 (767)
.+.++.|..++.++++++++.++++.|.+++++.+||+|+ ++++|+|+.+|++. . .+.+++++|++
T Consensus 93 ~~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~--~---------~~~~v~~im~~-- 158 (486)
T 2cu0_A 93 KRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA--R---------EGKLVKELMTK-- 158 (486)
T ss_dssp HTCC----------------------------------------------------------------------------
T ss_pred cchhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc--C---------CCCCHHHHccC--
Confidence 3567889999999999999999999999999999999997 99999999999985 1 34578999987
Q ss_pred CCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 704 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 704 ~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++...
T Consensus 159 ----~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-----~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 159 ----EVITVPESIEVEEALKIMIENRIDRLPVVDE-----RGKLVGLITMSDLVARKK 207 (486)
T ss_dssp ---------------------------------------------------------C
T ss_pred ----CCeEECCcCcHHHHHHHHHHcCCCEEEEEec-----CCeEEEEEEHHHHHHhhh
Confidence 7889999999999999999999999999997 899999999999999875
No 76
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.79 E-value=9.7e-09 Score=84.55 Aligned_cols=65 Identities=17% Similarity=0.255 Sum_probs=54.9
Q ss_pred CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 633 ~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
+++++++++|+.||++.|.+++++++||+| +|+++|++|.+|+.+.+.. ......+.+++++|++
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~---~~~~~~~~~V~~iMt~ 65 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVA---KGKNPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTT---TTCCGGGCBGGGTCEE
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHh---cCCCcccCCHHHhcCC
Confidence 367899999999999999999999999998 6899999999999876532 1233457789999998
No 77
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.73 E-value=1.6e-08 Score=102.12 Aligned_cols=102 Identities=17% Similarity=0.059 Sum_probs=56.4
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccccC
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSAD 702 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~ 702 (767)
+.+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ...+.+.+
T Consensus 71 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~---------~~~~~~~~- 140 (213)
T 1vr9_A 71 DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL---------AMDVPGIR- 140 (213)
T ss_dssp TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC---------C--------
T ss_pred CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh---------cCCCCcEE-
Confidence 46799999999999999999999999999999999999998899999999999998764211 12233322
Q ss_pred CCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEec
Q 004220 703 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVME 738 (767)
Q Consensus 703 ~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~ 738 (767)
-.+.+.....++.++.+.|.+++.+.++|++.
T Consensus 141 ----l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 141 ----FSVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp ------------------------------------
T ss_pred ----EEEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 01112244456999999999999999999865
No 78
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.46 E-value=3e-07 Score=74.88 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=54.6
Q ss_pred CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 633 ~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
++.++++++++.++++.|.+++++.+||+|+ ++++|+||.+|+.+.+.... ....+.+++++|++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~---~~~~~~~v~~im~~ 65 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKG---KNPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTT---CCGGGCBGGGTCEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcC---CCcccCCHHHhcCC
Confidence 3578999999999999999999999999997 99999999999998764211 12346789999987
No 79
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.31 E-value=3.5e-07 Score=88.46 Aligned_cols=60 Identities=17% Similarity=0.271 Sum_probs=55.4
Q ss_pred ccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHh
Q 004220 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (767)
Q Consensus 690 ~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~ 760 (767)
..+.+|+|+|++ ++.++++++++.+|++.|.+++++.+||+|+ +|+++|+||..|+++..
T Consensus 15 l~~~~V~diM~~------~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 15 IRQVPIRDILTS------PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-----NGHLVGIITESDFLRGS 74 (170)
T ss_dssp HHTSBGGGGCCS------CCCCEETTSBHHHHHHHHHHTTCSEEEEECT-----TSCEEEEEEGGGGGGGT
T ss_pred HcCCCHHHhcCC------CCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-----CccEEEEEEHHHHHHHH
Confidence 457889999998 8999999999999999999999999999997 89999999999997653
No 80
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.27 E-value=1.7e-06 Score=70.97 Aligned_cols=46 Identities=11% Similarity=0.213 Sum_probs=43.1
Q ss_pred CeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHh
Q 004220 709 PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 760 (767)
Q Consensus 709 ~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~ 760 (767)
++++++++++.+|+++|.+++++++||+| +|+++||+|..|+++..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d------~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME------GDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHH
Confidence 57899999999999999999999999998 68999999999998765
No 81
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.19 E-value=1.7e-06 Score=83.80 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=53.6
Q ss_pred ccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCC-CeEEEEEeHHHHHHHhhh
Q 004220 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR-GQLVGLLDRESIILACRF 762 (767)
Q Consensus 690 ~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~-g~lvGIVt~~DIl~~~~~ 762 (767)
..+.+++++|++ .+++.++++++++.+|++.|.+++.+.+||+|+ + ++++|+||.+|+++...+
T Consensus 39 l~~~~v~diM~~----~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~~ 103 (172)
T 3lhh_A 39 LDERTISSLMVP----RSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN-----NVDDMVGIISAKQLLSESIA 103 (172)
T ss_dssp ----CTTTTSEE----GGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS-----STTSEEEEEEHHHHHHHHHT
T ss_pred cCCCCHHHhCcc----HHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCeEEEEEEHHHHHHHHhh
Confidence 456789999983 126889999999999999999999999999996 6 899999999999998753
No 82
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.16 E-value=3.3e-06 Score=77.16 Aligned_cols=58 Identities=24% Similarity=0.285 Sum_probs=53.5
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l 680 (767)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 67 ~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 46789999965 78999999999999999999999999999999999999999999865
No 83
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.15 E-value=2.9e-06 Score=76.59 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=54.9
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 62 ~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 62 KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 4899999999999999999999999999999999999999899999999999998763
No 84
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.12 E-value=3.5e-06 Score=77.36 Aligned_cols=59 Identities=31% Similarity=0.381 Sum_probs=54.1
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 70 ~~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 70 GQKQLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TTSBHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred CcCCHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 3578999995 5889999999999999999999999999999999999999999998763
No 85
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.11 E-value=2.6e-06 Score=81.40 Aligned_cols=60 Identities=18% Similarity=0.223 Sum_probs=54.7
Q ss_pred hhccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 620 ~l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
.....+|+++|++++.++++++++.++++.|.+++ .+||+|++|+++|+||.+|+++.+.
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~ 141 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVN 141 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHH
Confidence 45678999999999999999999999999998765 5999999999999999999999875
No 86
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.09 E-value=3.8e-06 Score=78.73 Aligned_cols=60 Identities=25% Similarity=0.337 Sum_probs=56.2
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999999875
No 87
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.09 E-value=2.6e-06 Score=77.95 Aligned_cols=58 Identities=19% Similarity=0.132 Sum_probs=55.1
Q ss_pred CccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 624 ~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 68 ~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ 125 (128)
T 3gby_A 68 EKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLA 125 (128)
T ss_dssp CBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 6799999999999999999999999999999999999999999999999999998874
No 88
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.09 E-value=5.7e-06 Score=75.92 Aligned_cols=60 Identities=22% Similarity=0.252 Sum_probs=56.3
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.+
T Consensus 66 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 66 ETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp TCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 578999999999999999999999999999999999999989999999999999988753
No 89
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.09 E-value=6.3e-06 Score=77.37 Aligned_cols=58 Identities=22% Similarity=0.244 Sum_probs=55.0
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 87 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 87 KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 67899999 88999999999999999999999999999999999999999999998874
No 90
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.08 E-value=5.4e-06 Score=76.81 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=54.0
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 68 ~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 46789999976 899999999999999999999999999999999999999999997653
No 91
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.07 E-value=6.8e-06 Score=82.21 Aligned_cols=62 Identities=15% Similarity=0.164 Sum_probs=57.7
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYA 683 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~ 683 (767)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+...
T Consensus 114 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 114 PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREH 175 (205)
T ss_dssp TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHH
T ss_pred CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHH
Confidence 35689999999999999999999999999999999999999999999999999999988643
No 92
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.07 E-value=7.6e-06 Score=74.99 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=53.2
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 67 ~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 67 PALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp TTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 35689999965 889999999999999999999999999999999999999999998874
No 93
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.06 E-value=5e-06 Score=80.46 Aligned_cols=61 Identities=30% Similarity=0.313 Sum_probs=57.4
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 96 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 96 YGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999998864
No 94
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.04 E-value=9.3e-06 Score=65.81 Aligned_cols=47 Identities=11% Similarity=0.195 Sum_probs=43.7
Q ss_pred CeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 709 PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 709 ~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
+.++++++++.+|+++|.+++.+.+||+| +|+++|+||.+|+++.+.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d------~~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME------GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHH
Confidence 56899999999999999999999999999 589999999999999863
No 95
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.04 E-value=7.2e-06 Score=77.56 Aligned_cols=58 Identities=21% Similarity=0.209 Sum_probs=55.3
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 85 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELF 142 (153)
T ss_dssp TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHH
T ss_pred CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHh
Confidence 67899999 89999999999999999999999999999999999999999999999875
No 96
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.03 E-value=6.2e-06 Score=75.82 Aligned_cols=58 Identities=22% Similarity=0.190 Sum_probs=53.3
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 69 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 35688999 67889999999999999999999999999999999999999999998874
No 97
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.03 E-value=1.2e-05 Score=75.58 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=55.1
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
....+++++|++++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+.+
T Consensus 84 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 84 LEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 35678999999999999999999999999999886 9999999999999999999998753
No 98
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.02 E-value=7.2e-06 Score=84.05 Aligned_cols=60 Identities=22% Similarity=0.292 Sum_probs=55.5
Q ss_pred ccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 692 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 692 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+.+++|+|++ ++.++++++++.+|+++|.+++++++||+|+ +|+++|+||..|+++.+.+
T Consensus 6 ~~~v~~im~~------~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-----~~~l~Giit~~di~~~~~~ 65 (245)
T 3l2b_A 6 KLKVEDLEMD------KIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-----NNHLLGMLSTSNITATYMD 65 (245)
T ss_dssp CCBGGGSCCB------CCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-----TCBEEEEEEHHHHHHHHHC
T ss_pred cCcHHHhcCC------CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHH
Confidence 4679999988 7899999999999999999999999999997 7999999999999998743
No 99
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.01 E-value=7e-06 Score=84.70 Aligned_cols=63 Identities=13% Similarity=0.148 Sum_probs=55.5
Q ss_pred ccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 690 ~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
..+..++|+|++ ++.++.+++++.+|.++|.+++++.+||||++ ++++++|+||++||++++.
T Consensus 10 ~~~~~v~diMt~------~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~---~~~~LvGiIt~~dl~~~l~ 72 (250)
T 2d4z_A 10 KYNIQVGDIMVR------DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTP---DTNTLLGSIDRTEVEGLLQ 72 (250)
T ss_dssp CSSCBTTSSSBS------SCCCEETTCBHHHHHHHHHHCCCSEEEEESCT---TTCBEEEEEEHHHHHHHHH
T ss_pred cCCCChHHhcCC------CCeEECCCCCHHHHHHHHHhcCCCEEEEEecC---CCCeEEEEEEHHHHHHHHH
Confidence 456789999998 89999999999999999999999999999961 1368999999999998754
No 100
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.00 E-value=7.3e-06 Score=77.82 Aligned_cols=59 Identities=31% Similarity=0.193 Sum_probs=55.5
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 94 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 94 IAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALW 152 (157)
T ss_dssp SSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred cCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHH
Confidence 45789999999 999999999999999999999999999998899999999999998874
No 101
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.00 E-value=8.3e-06 Score=73.78 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=55.3
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+.
T Consensus 63 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999999999997 99999999999998763
No 102
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.98 E-value=9.5e-06 Score=74.69 Aligned_cols=60 Identities=22% Similarity=0.324 Sum_probs=55.8
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
....+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+.
T Consensus 71 ~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHH
Confidence 356789999999999999999999999999999999999999 799999999999998774
No 103
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.98 E-value=1.3e-05 Score=74.11 Aligned_cols=59 Identities=20% Similarity=0.307 Sum_probs=53.7
Q ss_pred ccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHH
Q 004220 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILA 759 (767)
Q Consensus 690 ~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~ 759 (767)
..+.+++++|++ ++.++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++.
T Consensus 4 l~~~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~ 62 (138)
T 2yzi_A 4 DMKAPIKVYMTK------KLLGVKPSTSVQEASRLMMEFDVGSLVVIND-----DGNVVGFFTKSDIIRR 62 (138)
T ss_dssp CTTSBGGGTCBC------CCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHH
T ss_pred hhhhhHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHH
Confidence 356779999988 7899999999999999999999999999997 7999999999999853
No 104
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.97 E-value=1.2e-05 Score=74.66 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=53.4
Q ss_pred cchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCC--eEEEEEeHHHHHHHhh
Q 004220 693 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG--QLVGLLDRESIILACR 761 (767)
Q Consensus 693 ~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g--~lvGIVt~~DIl~~~~ 761 (767)
.+++++|++ ++.++++++++.+|++.|.+++.+.+||+|+ ++ +++|+||.+|+++.+.
T Consensus 5 ~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~Givt~~dl~~~~~ 64 (141)
T 2rih_A 5 IRTSELLKR------PPVSLPETATIREVATELAKNRVGLAVLTAR-----DNPKRPVAVVSERDILRAVA 64 (141)
T ss_dssp CBGGGGCCS------CCEEEETTCBHHHHHHHHHHHTCSEEEEEET-----TEEEEEEEEEEHHHHHHHHH
T ss_pred eEHHHHhcC------CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcceeEEEEEHHHHHHHHh
Confidence 568999988 7999999999999999999999999999996 67 9999999999998763
No 105
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.94 E-value=1.5e-05 Score=75.24 Aligned_cols=58 Identities=16% Similarity=0.318 Sum_probs=53.8
Q ss_pred cCccccccc------cCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHH
Q 004220 623 RVFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (767)
Q Consensus 623 ~~~V~dvM~------~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l 680 (767)
..+++++|. +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 457888996 7899999999999999999999999999999889999999999999876
No 106
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.94 E-value=1.4e-05 Score=73.71 Aligned_cols=60 Identities=20% Similarity=0.365 Sum_probs=54.5
Q ss_pred cccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHH-HHHhh
Q 004220 691 KKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESI-ILACR 761 (767)
Q Consensus 691 ~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DI-l~~~~ 761 (767)
.+.+++++|++ ++.++++++++.++.+.|.+++.+.+||+|+ +|+++|+||.+|+ .+...
T Consensus 6 ~~~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 6 KNIKVKDVMTK------NVITAKRHEGVVEAFEKMLKYKISSLPVIDD-----ENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp TTCBGGGTSBC------SCCCEETTSBHHHHHHHHHHHTCCEEEEECT-----TCBEEEEEEHHHHHHHHTT
T ss_pred ccCCHHHhhcC------CceEECCCCcHHHHHHHHHHCCCcEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 46779999987 7899999999999999999999999999997 7999999999999 87653
No 107
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.92 E-value=1.1e-05 Score=76.80 Aligned_cols=62 Identities=10% Similarity=0.153 Sum_probs=57.3
Q ss_pred hccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCC---cEEEEEehhhHHHHHHH
Q 004220 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN---ILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 621 l~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g---~lvGiVt~~dL~~~l~~ 682 (767)
....+++++|++ ++.++++++++.++++.|.+++.+.+||+|++| +++|+||.+|+.+.+.+
T Consensus 78 ~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 78 LTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred ccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 356789999998 999999999999999999999999999999888 99999999999998864
No 108
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.92 E-value=1.2e-05 Score=76.57 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=53.9
Q ss_pred ccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 692 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 692 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
..+++++|++ ++.++++++++.+|+++|.+++.+.+||+|+ +|+++|+||.+|+++...
T Consensus 4 ~~~v~dim~~------~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 4 MIKVEDMMTR------HPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-----NKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp CCBGGGTSEE------SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHHH
Confidence 4578999988 7899999999999999999999999999997 799999999999998753
No 109
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.91 E-value=1.7e-05 Score=77.01 Aligned_cols=81 Identities=6% Similarity=-0.012 Sum_probs=60.9
Q ss_pred EEEEEehhhHHHHHHHHhhhcccccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCC-C
Q 004220 667 LIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR-G 745 (767)
Q Consensus 667 lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~-g 745 (767)
--|.++..+-...... ....+.+++++|++ .+++.++++++++.+|+++|.+++++.+||+|+ + +
T Consensus 15 ~~g~l~~~e~~~i~~~-----l~l~~~~v~diM~~----~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-----~~~ 80 (173)
T 3ocm_A 15 AVPAFGVEERNMVSGV-----LTLAERSIRSIMTP----RTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG-----SLD 80 (173)
T ss_dssp ---CCCHHHHHHHHHH-----HHHTTSCSTTTSEE----GGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS-----STT
T ss_pred hcCCcCHHHHHHHHHH-----hccCCCCHHHhCCc----HHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC-----CCC
Confidence 3466775553322110 12456789999974 125789999999999999999999999999986 5 8
Q ss_pred eEEEEEeHHHHHHHhh
Q 004220 746 QLVGLLDRESIILACR 761 (767)
Q Consensus 746 ~lvGIVt~~DIl~~~~ 761 (767)
+++|+||.+|+++...
T Consensus 81 ~lvGivt~~Dl~~~~~ 96 (173)
T 3ocm_A 81 EVVGIGRAKDLVADLI 96 (173)
T ss_dssp SEEEEEEHHHHHHHHH
T ss_pred CEEEEEEHHHHHHHHh
Confidence 9999999999998764
No 110
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.89 E-value=1.9e-05 Score=74.12 Aligned_cols=61 Identities=11% Similarity=0.122 Sum_probs=53.9
Q ss_pred cchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 693 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 693 ~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
.+++++|++ ..++.++++++++.+|++.|.+++.+.+||+|+ +|+++|+||.+|+.+.+.+
T Consensus 28 ~~v~dim~~----~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 28 LRVNDIMHT----GDEIPHVGLQATLRDALLEITRKNLGMTAICDD-----DMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp SBGGGTSBC----GGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-----TCBEEEEEEHHHHHHHHCS
T ss_pred cCHHHHhcC----CCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCcEEEEecHHHHHHHHhc
Confidence 478999875 125789999999999999999999999999997 7999999999999987654
No 111
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.88 E-value=1.6e-05 Score=76.19 Aligned_cols=60 Identities=17% Similarity=0.211 Sum_probs=56.1
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
....+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+.
T Consensus 90 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 90 SLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTT
T ss_pred cccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 4567899999999999999999999999999999999999998 99999999999998864
No 112
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.88 E-value=2.7e-05 Score=73.53 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=54.9
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+..
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 35678999999999999999999999999999876 9999989999999999999988753
No 113
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.87 E-value=1.4e-05 Score=75.52 Aligned_cols=62 Identities=18% Similarity=0.132 Sum_probs=53.9
Q ss_pred cccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 691 KKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 691 ~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
...+++++|++ .+++.++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++...
T Consensus 13 ~~~~v~dim~p----~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 13 LLGQEETFLTP----AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-----EKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp HHTTGGGGEEE----GGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------CBEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHcCc----ccCceEECCCCCHHHHHHHHHHCCCceEeEECC-----CCEEEEEEcHHHHHHHHH
Confidence 34568999984 226889999999999999999999999999997 899999999999998764
No 114
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.87 E-value=1.4e-05 Score=75.69 Aligned_cols=60 Identities=23% Similarity=0.305 Sum_probs=56.3
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
...+++++|++++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+..
T Consensus 76 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 76 KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 7999999999999998863
No 115
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.86 E-value=1.1e-05 Score=74.01 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=54.1
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l 680 (767)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 72 NTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTC
T ss_pred cccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 457899999999999999999999999999999999999997 8999999999998764
No 116
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.84 E-value=2.5e-05 Score=74.16 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=51.3
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE 677 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~ 677 (767)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.
T Consensus 101 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 46789999976 88999999999999999999999999999999999999999985
No 117
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.84 E-value=6.9e-05 Score=85.22 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=77.0
Q ss_pred ccCcccccccc-CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhccc
Q 004220 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCS 700 (767)
Q Consensus 622 ~~~~V~dvM~~-~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~ 700 (767)
.+.+++++|++ +++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++..... ..++|.+.
T Consensus 173 ~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p---------~a~~D~~~ 243 (511)
T 3usb_A 173 YSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFP---------NSAKDKQG 243 (511)
T ss_dssp SSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCT---------TCCBCTTS
T ss_pred CCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcc---------cchhhhcc
Confidence 45789999998 999999999999999999999999999999999999999999999987521 11223222
Q ss_pred cCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEe
Q 004220 701 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVM 737 (767)
Q Consensus 701 ~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd 737 (767)
+ ......+.......+.++.+.+.+.+.+.|-.
T Consensus 244 r----l~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 244 R----LLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp C----BCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred c----eeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 2 01122344444445556677778888776654
No 118
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.84 E-value=1.5e-05 Score=77.79 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=56.2
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
....+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 72 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 3457899999999999999999999999999999999999998899999999999987653
No 119
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.81 E-value=2.8e-05 Score=73.87 Aligned_cols=63 Identities=19% Similarity=0.283 Sum_probs=55.1
Q ss_pred ccccchhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 690 SKKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 690 ~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
..+.+++++|++ ++.++++++++.+|++.|.+++.+.+||+|++ ++|+++|+||.+|+.+...
T Consensus 10 ~~~~~v~dim~~------~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~---~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 10 SHHVRVEHFMNH------SITTLAKDTPLEEVVKVVTSTDVTEYPLVEST---ESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp CCSCBHHHHCBC------CCCCEETTCBHHHHHHHHHTCCCSEEEEESCT---TTCBEEEEEEHHHHHHHHH
T ss_pred ccCCCHHHHcCC------CCeEECCCCcHHHHHHHHHhCCCCceeEEecC---CCCEEEEEEEHHHHHHHHH
Confidence 346779999998 78999999999999999999999999999830 1589999999999998764
No 120
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.81 E-value=2.9e-05 Score=75.43 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=56.4
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
....+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+..
T Consensus 105 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 105 PPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 345689999999999999999999999999999999999999 8999999999999998764
No 121
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.79 E-value=3.9e-05 Score=71.02 Aligned_cols=60 Identities=12% Similarity=0.249 Sum_probs=52.7
Q ss_pred ccchhh---ccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHHHHhhh
Q 004220 692 KLLVSE---MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 762 (767)
Q Consensus 692 ~~~V~d---vm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl~~~~~ 762 (767)
+.++++ +|.+ ++.++++++++.+|++.|.+++.+.+||+|+ +|+++|+||.+|+.+...+
T Consensus 7 ~~~v~~~~~~~~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 7 KIPIGDLNIITQD------NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-----NGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp GSBGGGSSCCBCS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHT
T ss_pred hcchhhcCCCCCC------CceEECCCCcHHHHHHHHHHcCcceeeEEcC-----CCcEEEEEcHHHHHHHhcc
Confidence 455677 6766 7889999999999999999999999999997 7999999999999987643
No 122
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.76 E-value=2.9e-05 Score=73.67 Aligned_cols=60 Identities=12% Similarity=0.210 Sum_probs=54.6
Q ss_pred hccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 621 l~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+..
T Consensus 83 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 83 LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 35678999999999999999999999999998876 9999989999999999999998753
No 123
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.75 E-value=5.9e-06 Score=94.00 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=19.3
Q ss_pred ccCccccccccC--ceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcc
Q 004220 622 RRVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMC 699 (767)
Q Consensus 622 ~~~~V~dvM~~~--~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm 699 (767)
...+|+++|+++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..... ..+ ....++
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~----~~d-~~~~l~ 233 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE----LVD-SQKRYL 233 (503)
T ss_dssp ---------------------------------------------------------------CCC----CBC-TTSCBC
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc----hhc-cccccc
Confidence 456899999987 9999999999999999999999999999999999999999999987742111 111 111121
Q ss_pred ccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEE
Q 004220 700 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPV 735 (767)
Q Consensus 700 ~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpV 735 (767)
. ...+.. .+..+..+.|.+.+.+.+.|
T Consensus 234 v--------~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 234 V--------GAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp C--------EEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred c--------ccccCc-hhHHHHHHHHHhhhccceEE
Confidence 1 124455 56666688888889987655
No 124
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.72 E-value=4.4e-05 Score=80.37 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=57.2
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 199 ~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999998764
No 125
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.69 E-value=4e-05 Score=80.25 Aligned_cols=60 Identities=27% Similarity=0.329 Sum_probs=56.0
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 197 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 197 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-
T ss_pred CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999998764
No 126
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.63 E-value=7.8e-05 Score=84.14 Aligned_cols=61 Identities=26% Similarity=0.312 Sum_probs=57.5
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHH
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~ 682 (767)
.+.+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 217 ~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999998754
No 127
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.46 E-value=0.0001 Score=84.38 Aligned_cols=61 Identities=25% Similarity=0.374 Sum_probs=55.7
Q ss_pred ccccchhhccccCCCCccCCeEecCC-CCHHHHHHHHHhcCCCEeEEEe-ccCCCCCCeEEEEEeHHHHHHHhh
Q 004220 690 SKKLLVSEMCSADGETCCVPCTATPN-MNLLSALILMDRYGVNQVPVVM-EHIPGQRGQLVGLLDRESIILACR 761 (767)
Q Consensus 690 ~~~~~V~dvm~~~~~~~~~~~~V~~d-~sL~ea~~~m~~~~~~~lpVVd-~~~~~~~g~lvGIVt~~DIl~~~~ 761 (767)
..+.+|+|+|++ ++.+++++ +++.+|+++|.+++++.+||+| + +++++|+||.+|+++.+.
T Consensus 381 l~~~~V~diM~~------~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~-----~g~lvGiVt~~Dll~~l~ 443 (527)
T 3pc3_A 381 WWSLAIAELELP------APPVILKSDATVGEAIALMKKHRVDQLPVVDQD-----DGSVLGVVGQETLITQIV 443 (527)
T ss_dssp TTTSBGGGGCCC------CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT-----TCCEEEEEEHHHHHHHHH
T ss_pred ccCCcHHHhCcC------CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC-----CCEEEEEEEHHHHHHHHH
Confidence 446789999998 78999999 9999999999999999999999 6 789999999999998764
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.25 E-value=0.0011 Score=75.09 Aligned_cols=60 Identities=30% Similarity=0.318 Sum_probs=56.6
Q ss_pred ccCcccccccc-CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~-~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
.+.+++++|++ ++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+...
T Consensus 150 ~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHh
Confidence 45789999998 8999999999999999999999999999999999999999999999875
No 129
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.17 E-value=0.00012 Score=81.78 Aligned_cols=59 Identities=25% Similarity=0.242 Sum_probs=0.0
Q ss_pred cCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 623 ~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
..+|+|+|++++++++++.++++|.++|.+++...+||||++++++|+||.+|+.+...
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -----------------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 46899999999999999999999999999999999999999999999999999987653
No 130
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.15 E-value=0.00011 Score=83.28 Aligned_cols=100 Identities=27% Similarity=0.367 Sum_probs=17.5
Q ss_pred ccCccccccccCceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHHHHhhhcccccccchhhcccc
Q 004220 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKKLLVSEMCSA 701 (767)
Q Consensus 622 ~~~~V~dvM~~~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~~V~dvm~~ 701 (767)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+..... ....+.+..
T Consensus 148 ~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~---------~~~~~~~g~ 218 (486)
T 2cu0_A 148 EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYK---------NAVRDENGE 218 (486)
T ss_dssp -----------------------------------------------------------CCT---------TCCBCTTSC
T ss_pred CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhcc---------ccccccCCc
Confidence 45689999999999999999999999999999999999999999999999999999875310 011111110
Q ss_pred CCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEe
Q 004220 702 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVM 737 (767)
Q Consensus 702 ~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd 737 (767)
.. ....+..++ .+....+.+.+.+.+ |+|
T Consensus 219 --~~--v~~~~~~~~--~~~a~~l~~~gvd~l-vvd 247 (486)
T 2cu0_A 219 --LL--VAAAVSPFD--IKRAIELDKAGVDVI-VVD 247 (486)
T ss_dssp --BC--CEEEECTTC--HHHHHHHHHTTCSEE-EEE
T ss_pred --ee--ecceechhh--HHHHHHHHHhcCCce-EEE
Confidence 00 011234433 556777888888875 566
No 131
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.10 E-value=0.00022 Score=80.71 Aligned_cols=60 Identities=27% Similarity=0.294 Sum_probs=0.0
Q ss_pred ccCccccccc-c-CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMR-T-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~-~-~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|+ + ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+...
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 4568999999 4 6999999999999999999999999999999999999999999998764
No 132
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.94 E-value=0.00032 Score=79.61 Aligned_cols=60 Identities=20% Similarity=0.275 Sum_probs=4.7
Q ss_pred ccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHHH
Q 004220 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (767)
Q Consensus 622 ~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l~ 681 (767)
...+++++|++ ++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+...
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp --------------------------------------------------------CHHHHT
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 35689999998 9999999999999999999999999999999999999999999998764
No 133
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.82 E-value=0.0016 Score=73.75 Aligned_cols=52 Identities=23% Similarity=0.386 Sum_probs=46.6
Q ss_pred hhhccccCCCCccCCeEecCCCCHHHHHHHHHhcCCCEeEEEeccCCCCCCeEEEEEeHHHHH
Q 004220 695 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 757 (767)
Q Consensus 695 V~dvm~~~~~~~~~~~~V~~d~sL~ea~~~m~~~~~~~lpVVd~~~~~~~g~lvGIVt~~DIl 757 (767)
++++|.+ ++.++++++++.++.++|.+++++.+||+|+ +++++|+||.+|+.
T Consensus 91 ~~~~m~~------d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-----~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 91 FEAGVVT------HPVTVRPEQTIADVMELTHYHGFAGFPVVTE-----NNELVGIITGRDVR 142 (496)
T ss_dssp CCC--CB------CCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-----SSBEEEEEEHHHHT
T ss_pred ccccccc------CceEECCCCCHHHHHHHHHHcCCcEEEEEcc-----CCEEEEEEEHHHHh
Confidence 4667777 7899999999999999999999999999997 78999999999996
No 134
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.37 E-value=0.00045 Score=78.81 Aligned_cols=59 Identities=22% Similarity=0.275 Sum_probs=42.8
Q ss_pred ccCcccccccc--CceEEeCCCCHHHHHHHHHHcCCcEEEEeCCCCcEEEEEehhhHHHHH
Q 004220 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (767)
Q Consensus 622 ~~~~V~dvM~~--~~~~V~~~~tl~eal~~m~~~~~~~lpVvd~~g~lvGiVt~~dL~~~l 680 (767)
...+++++|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 45689999998 999999999999999999999999999999999999999999998754
Done!