Query 004225
Match_columns 767
No_of_seqs 396 out of 3632
Neff 10.5
Searched_HMMs 13730
Date Mon Mar 25 18:16:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004225.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004225hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 4.3E-38 3.2E-42 345.8 43.9 401 357-762 74-502 (503)
2 d1q1sc_ a.118.1.1 (C:) Importi 100.0 3.4E-37 2.5E-41 332.2 43.3 391 360-759 14-434 (434)
3 d1wa5b_ a.118.1.1 (B:) Karyoph 100.0 8.1E-28 5.9E-32 263.3 31.3 347 398-759 76-446 (503)
4 d1q1sc_ a.118.1.1 (C:) Importi 100.0 9.3E-28 6.8E-32 257.8 29.8 346 397-759 12-386 (434)
5 d1jdha_ a.118.1.1 (A:) beta-Ca 100.0 4E-27 2.9E-31 259.6 35.3 388 348-757 90-528 (529)
6 d1jdha_ a.118.1.1 (A:) beta-Ca 100.0 5.4E-27 4E-31 258.5 31.9 399 359-761 17-491 (529)
7 d1xm9a1 a.118.1.24 (A:244-700) 99.9 5.2E-23 3.8E-27 221.0 24.8 348 398-763 2-453 (457)
8 d1xm9a1 a.118.1.24 (A:244-700) 99.8 2.9E-19 2.1E-23 191.3 25.1 314 360-705 3-450 (457)
9 d1xqra1 a.118.1.21 (A:87-350) 99.7 3.9E-17 2.8E-21 160.6 17.8 192 413-630 31-226 (264)
10 d1xqra1 a.118.1.21 (A:87-350) 99.7 1.9E-16 1.4E-20 155.6 18.2 228 492-759 28-264 (264)
11 d1b3ua_ a.118.1.2 (A:) Constan 99.6 6.2E-14 4.5E-18 155.2 26.1 363 361-757 205-585 (588)
12 d2vglb_ a.118.1.10 (B:) Adapti 99.6 4E-13 2.9E-17 146.9 30.3 349 360-758 47-453 (579)
13 d1b3ua_ a.118.1.2 (A:) Constan 99.5 2.4E-13 1.7E-17 150.3 22.6 364 361-759 166-548 (588)
14 d2omza2 c.10.2.1 (A:33-416) In 99.4 4.7E-12 3.4E-16 131.5 23.1 290 5-341 43-382 (384)
15 d2astb2 c.10.1.3 (B:2136-2419) 99.4 7.1E-14 5.2E-18 138.0 8.4 191 29-260 43-235 (284)
16 d2omza2 c.10.2.1 (A:33-416) In 99.4 5.8E-12 4.2E-16 130.8 22.0 256 4-317 64-382 (384)
17 d1xkua_ c.10.2.7 (A:) Decorin 99.4 1.2E-11 9.1E-16 123.5 22.2 91 18-130 21-111 (305)
18 d2vglb_ a.118.1.10 (B:) Adapti 99.4 2.3E-12 1.7E-16 140.8 17.5 358 360-758 84-489 (579)
19 d2astb2 c.10.1.3 (B:2136-2419) 99.4 3.7E-13 2.7E-17 132.7 9.1 215 63-324 44-261 (284)
20 d1ogqa_ c.10.2.8 (A:) Polygala 99.2 5.6E-11 4.1E-15 119.1 13.7 66 59-130 70-136 (313)
21 d1jl5a_ c.10.2.6 (A:) Leucine 99.2 6.8E-10 5E-14 113.2 21.5 94 7-131 39-132 (353)
22 d1xkua_ c.10.2.7 (A:) Decorin 99.1 2.8E-09 2E-13 106.0 23.1 248 6-319 31-283 (305)
23 d1p9ag_ c.10.2.7 (G:) von Will 99.1 5.6E-10 4.1E-14 108.5 16.9 194 7-260 11-205 (266)
24 d1qbkb_ a.118.1.1 (B:) Karyoph 99.1 5.5E-10 4E-14 129.2 19.3 364 373-757 371-776 (888)
25 d1oyza_ a.118.1.16 (A:) Hypoth 99.1 3.7E-09 2.7E-13 103.4 21.8 256 397-755 18-274 (276)
26 d1oyza_ a.118.1.16 (A:) Hypoth 99.1 8.2E-09 6E-13 100.8 23.6 251 360-700 20-274 (276)
27 d1ogqa_ c.10.2.8 (A:) Polygala 99.1 6.4E-10 4.7E-14 111.2 15.4 113 7-134 51-164 (313)
28 d1p9ag_ c.10.2.7 (G:) von Will 99.1 1.7E-09 1.2E-13 105.1 17.4 174 64-291 30-204 (266)
29 d1h6ua2 c.10.2.1 (A:36-262) In 99.1 8.6E-10 6.3E-14 104.4 14.9 57 197-259 170-226 (227)
30 d2vgla_ a.118.1.10 (A:) Adapti 99.1 4.4E-09 3.2E-13 114.5 22.1 141 360-512 67-210 (584)
31 d1h6ua2 c.10.2.1 (A:36-262) In 99.0 9.2E-10 6.7E-14 104.2 14.4 97 200-316 129-225 (227)
32 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.0 2.4E-09 1.7E-13 102.5 16.9 104 9-130 11-114 (242)
33 d1ozna_ c.10.2.7 (A:) Reticulo 99.0 4.3E-09 3.2E-13 103.3 18.6 201 32-291 32-234 (284)
34 d1u6gc_ a.118.1.2 (C:) Cullin- 99.0 7.4E-09 5.4E-13 123.9 24.6 387 361-758 5-459 (1207)
35 d1ibrb_ a.118.1.1 (B:) Importi 99.0 9.7E-10 7.1E-14 116.3 12.5 336 361-707 36-439 (458)
36 d1qbkb_ a.118.1.1 (B:) Karyoph 99.0 9.5E-09 6.9E-13 118.6 22.0 338 361-707 397-823 (888)
37 d2omxa2 c.10.2.1 (A:37-235) In 99.0 3E-09 2.2E-13 98.0 13.8 61 199-266 127-187 (199)
38 d1h6ta2 c.10.2.1 (A:31-240) In 99.0 3E-09 2.2E-13 99.0 13.7 166 30-259 44-209 (210)
39 d1h6ta2 c.10.2.1 (A:31-240) In 98.9 6.9E-09 5E-13 96.4 13.3 165 64-291 45-209 (210)
40 d1ozna_ c.10.2.7 (A:) Reticulo 98.9 1.9E-08 1.4E-12 98.5 17.0 108 7-130 33-140 (284)
41 d2omxa2 c.10.2.1 (A:37-235) In 98.9 9.1E-09 6.6E-13 94.7 13.5 162 30-255 38-199 (199)
42 d1jl5a_ c.10.2.6 (A:) Leucine 98.8 4.5E-08 3.3E-12 99.3 18.9 80 1-104 53-132 (353)
43 d1ibrb_ a.118.1.1 (B:) Importi 98.8 7.8E-08 5.7E-12 101.2 20.3 368 362-758 3-435 (458)
44 d1u6gc_ a.118.1.2 (C:) Cullin- 98.8 1.8E-07 1.3E-11 111.6 24.0 335 360-707 46-463 (1207)
45 d1qgra_ a.118.1.1 (A:) Importi 98.7 1.8E-07 1.3E-11 107.3 21.5 372 360-758 36-478 (876)
46 d2bpta1 a.118.1.1 (A:1-861) Im 98.7 4.2E-07 3.1E-11 103.8 23.2 335 360-707 40-443 (861)
47 d2bpta1 a.118.1.1 (A:1-861) Im 98.7 1.8E-06 1.3E-10 98.5 27.6 376 361-757 226-709 (861)
48 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.7 5.9E-07 4.3E-11 85.3 19.3 65 200-267 153-217 (242)
49 d2vgla_ a.118.1.10 (A:) Adapti 98.6 1.8E-06 1.3E-10 93.4 24.5 315 399-757 67-423 (584)
50 d1a9na_ c.10.2.4 (A:) Spliceso 98.5 2.9E-07 2.1E-11 80.8 10.4 130 4-161 16-145 (162)
51 d1qgra_ a.118.1.1 (A:) Importi 98.4 1.3E-06 9.8E-11 99.8 17.5 309 361-706 130-481 (876)
52 d1ho8a_ a.118.1.9 (A:) Regulat 98.3 2.2E-05 1.6E-09 78.5 20.0 335 361-704 76-473 (477)
53 d1ho8a_ a.118.1.9 (A:) Regulat 98.2 3.6E-05 2.6E-09 76.8 20.1 320 399-758 75-472 (477)
54 d1a9na_ c.10.2.4 (A:) Spliceso 98.1 1.6E-06 1.2E-10 75.8 7.3 38 221-260 60-97 (162)
55 d1te4a_ a.118.1.16 (A:) MTH187 98.1 3E-07 2.2E-11 75.0 1.8 89 633-757 23-111 (111)
56 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.1 7E-06 5.1E-10 74.3 10.9 87 63-167 52-138 (192)
57 d1te4a_ a.118.1.16 (A:) MTH187 98.1 1.9E-07 1.4E-11 76.3 0.0 104 413-547 6-109 (111)
58 d1dcea3 c.10.2.2 (A:444-567) R 98.1 7.4E-06 5.4E-10 67.7 10.0 102 9-131 1-102 (124)
59 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.0 9.4E-07 6.9E-11 92.8 2.4 115 6-130 2-123 (460)
60 d1dcea3 c.10.2.2 (A:444-567) R 97.8 1.8E-05 1.3E-09 65.3 7.5 85 3-103 17-101 (124)
61 d1m9la_ c.10.3.1 (A:) Outer ar 97.7 7.5E-07 5.5E-11 81.0 -3.6 82 29-130 45-126 (198)
62 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.7 1.3E-05 9.1E-10 80.3 4.9 260 29-319 28-313 (344)
63 d1m9la_ c.10.3.1 (A:) Outer ar 97.6 4E-06 2.9E-10 76.1 -0.7 56 200-260 70-125 (198)
64 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.5 0.00025 1.9E-08 63.5 10.2 85 222-318 52-136 (192)
65 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.4 4.5E-05 3.3E-09 76.1 4.1 252 5-292 30-312 (344)
66 d2ifga3 c.10.2.7 (A:36-191) Hi 97.2 0.00073 5.3E-08 57.8 9.3 88 219-318 26-113 (156)
67 d2ifga3 c.10.2.7 (A:36-191) Hi 97.1 0.00066 4.8E-08 58.2 8.7 110 4-131 6-115 (156)
68 d1z7xw1 c.10.1.1 (W:1-460) Rib 97.1 6.7E-05 4.9E-09 78.1 2.4 183 149-341 220-435 (460)
69 d1upka_ a.118.1.15 (A:) Mo25 p 96.7 0.17 1.2E-05 46.8 21.7 198 521-758 68-273 (330)
70 d1wa5c_ a.118.1.1 (C:) Exporti 96.3 0.15 1.1E-05 57.3 23.5 105 360-467 36-152 (959)
71 d1upka_ a.118.1.15 (A:) Mo25 p 96.3 0.21 1.6E-05 46.0 19.5 226 476-741 65-303 (330)
72 d1lrva_ a.118.1.5 (A:) Leucine 96.3 0.0006 4.4E-08 62.2 1.9 168 396-697 64-231 (233)
73 d1lrva_ a.118.1.5 (A:) Leucine 95.1 0.0056 4E-07 55.6 3.5 28 356-383 63-90 (233)
74 d1wa5c_ a.118.1.1 (C:) Exporti 94.4 0.25 1.8E-05 55.4 16.2 181 413-598 472-673 (959)
75 d1lsha1 a.118.4.1 (A:285-620) 91.9 1.2 9E-05 42.2 14.3 159 371-556 139-313 (336)
76 d1pgva_ c.10.1.1 (A:) Tropomod 91.1 0.056 4.1E-06 46.1 3.2 39 91-129 71-110 (167)
77 d1pgva_ c.10.1.1 (A:) Tropomod 90.8 0.1 7.5E-06 44.4 4.6 16 91-106 14-29 (167)
78 d1io0a_ c.10.1.1 (A:) Tropomod 90.4 0.06 4.4E-06 45.9 2.7 68 91-164 73-141 (166)
79 d1lsha1 a.118.4.1 (A:285-620) 89.9 7.8 0.00057 36.3 21.6 175 482-705 125-309 (336)
80 d1io0a_ c.10.1.1 (A:) Tropomod 89.8 0.12 9E-06 43.8 4.2 40 91-130 16-57 (166)
81 d1koha1 c.10.2.3 (A:201-362) m 89.7 0.046 3.4E-06 46.4 1.3 12 199-210 64-75 (162)
82 d1koha1 c.10.2.3 (A:201-362) m 89.5 0.093 6.8E-06 44.4 3.1 14 117-130 63-76 (162)
83 d2bnxa1 a.118.1.23 (A:133-475) 87.3 3 0.00022 39.5 12.9 136 606-749 72-220 (343)
84 d1ujka_ a.118.9.2 (A:) ADP-rib 85.9 1.2 8.8E-05 36.1 7.8 93 633-732 46-144 (145)
85 d2bnxa1 a.118.1.23 (A:133-475) 83.4 9.2 0.00067 35.9 14.3 126 373-500 70-220 (343)
86 d1dvpa1 a.118.9.2 (A:1-145) Hr 80.5 2.1 0.00015 34.6 7.2 70 676-757 43-113 (145)
87 d1ujka_ a.118.9.2 (A:) ADP-rib 79.2 4.3 0.00031 32.6 8.6 71 676-758 46-122 (145)
88 d1mhqa_ a.118.9.2 (A:) ADP-rib 78.9 2.2 0.00016 34.4 6.7 74 633-706 39-118 (143)
89 d1mhqa_ a.118.9.2 (A:) ADP-rib 76.9 4.7 0.00034 32.3 8.2 70 676-757 39-114 (143)
90 d1juqa_ a.118.9.2 (A:) ADP-rib 75.0 6.3 0.00046 31.8 8.6 71 676-758 40-116 (151)
91 d1dvpa1 a.118.9.2 (A:1-145) Hr 66.7 3.9 0.00029 32.9 5.4 75 633-707 43-118 (145)
92 d1juqa_ a.118.9.2 (A:) ADP-rib 66.4 4.4 0.00032 32.8 5.6 74 633-706 40-119 (151)
93 d2jaka1 a.118.1.20 (A:30-372) 50.9 36 0.0026 31.4 9.8 77 435-512 130-206 (343)
94 d2jaka1 a.118.1.20 (A:30-372) 46.8 9.2 0.00067 35.6 4.9 73 396-470 131-207 (343)
95 d2b6ca1 a.118.1.17 (A:3-215) H 37.4 1.1E+02 0.008 25.6 12.9 139 404-564 56-196 (213)
96 d1j2jb_ a.7.8.1 (B:) ADP-ribos 35.6 35 0.0026 19.7 4.2 29 678-706 9-37 (41)
97 d1elka_ a.118.9.2 (A:) Tom1 pr 27.2 91 0.0066 24.5 7.4 70 676-757 50-124 (153)
98 d1elka_ a.118.9.2 (A:) Tom1 pr 27.1 49 0.0036 26.2 5.7 72 634-705 51-127 (153)
99 d1eo0a_ a.48.3.1 (A:) Transcri 20.3 36 0.0026 23.4 2.9 35 723-757 38-72 (77)
No 1
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=4.3e-38 Score=345.83 Aligned_cols=401 Identities=51% Similarity=0.724 Sum_probs=362.2
Q ss_pred hhcCHHHHHhhhcCCCHHHHHHHHHHHHHhc----CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh---h
Q 004225 357 KLVSLPGMLAGVWSDDSGLQLEATTWFRKLL----LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---E 429 (767)
Q Consensus 357 ~~~~i~~l~~~l~s~~~~~~~~a~~~L~~l~----~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~ 429 (767)
..+.++.++..+.++++..+..|+..++++. .++.+.+++.|+++.|+++++.+.++.++..|+++|.+++. .
T Consensus 74 ~~~~l~~~~~~~~s~~~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~ 153 (503)
T d1wa5b_ 74 LQQELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSA 153 (503)
T ss_dssp --CCHHHHHHHHSCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHH
Confidence 3457999999999999999999999999987 55678899999999999999977668899999999999998 5
Q ss_pred hhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhc
Q 004225 430 NTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFC 509 (767)
Q Consensus 430 ~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~ 509 (767)
....+.+.|+++.++.+|.+++.+++..|+|+|+|++.+++..++.+.+.|+++.++.++ .+.+..+++.++|++.+++
T Consensus 154 ~~~~~~~~g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll-~~~~~~~~~~~~~~l~nl~ 232 (503)
T d1wa5b_ 154 QTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLF-NSNKPSLIRTATWTLSNLC 232 (503)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGG-GSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCChHHHHHHhcCCChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhc-ccCCHHHHHHHHHHHHHHh
Confidence 677788999999999999999999999999999999999999999999999999999999 7888999999999999999
Q ss_pred CCC-CCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHH
Q 004225 510 QGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLW 588 (767)
Q Consensus 510 ~~~-~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~ 588 (767)
... +........+++|.+..++.++|.+++..++|++.+++...++....+.+.++++.++.++.+++. .++..|++
T Consensus 233 ~~~~~~~~~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--~v~~~al~ 310 (503)
T d1wa5b_ 233 RGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHEST--LVQTPALR 310 (503)
T ss_dssp CCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCH--HHHHHHHH
T ss_pred cCCccchHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCch--hhhhhHHH
Confidence 876 555666778999999999999999999999999999999988888889999999999999999998 99999999
Q ss_pred HHhhhhccCCcceeeh------------------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHH
Q 004225 589 TVRYIVKGDGFLTQCT------------------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKK 650 (767)
Q Consensus 589 ~L~~l~~~~~~~~~~l------------------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~ 650 (767)
++++++.+.+.....+ .++++++|+++|++.++++....+++.|+++.+++++.+.+.+++.
T Consensus 311 ~l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~ 390 (503)
T d1wa5b_ 311 AVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKK 390 (503)
T ss_dssp HHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhccHHHHHHHHHccccchhHHhcccCChhHHH
Confidence 9999998777655443 7789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCC--CHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHh
Q 004225 651 EAARAISNAISGG--THEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEA 728 (767)
Q Consensus 651 ~a~~~L~nl~~~~--~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 728 (767)
+|+|+|+|++..+ .++.+..+++.|++++|++++++.++++...++.+|.+++..++........ ..+.+...+++
T Consensus 391 ~a~~~l~nl~~~~~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~~~~~~~~~~~--~~~~~~~~iee 468 (503)
T d1wa5b_ 391 EACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGL--NINENADFIEK 468 (503)
T ss_dssp HHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTC--SSCHHHHHHHH
T ss_pred HHHHHHHHHHhcccccHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcc--cchHHHHHHHH
Confidence 9999999998743 3567888999999999999999999999999999999999866543322111 45778999999
Q ss_pred hchHHHHHHHhcCCChHHHHHHHHHHHHhcCCCc
Q 004225 729 AEGFKKIEDLKRHDSNGICEKAVKILEIYWSCGV 762 (767)
Q Consensus 729 ~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~~~~~ 762 (767)
.|+++.|+.++++++.+|+++|.+++++||+.|+
T Consensus 469 ~g~~~~i~~Lq~~~~~~i~~~A~~il~~~f~~~~ 502 (503)
T d1wa5b_ 469 AGGMEKIFNCQQNENDKIYEKAYKIIETYFGEEE 502 (503)
T ss_dssp TTHHHHHHGGGGCSCHHHHHHHHHHHHHHSSSCC
T ss_pred CCCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCcC
Confidence 9999999999999999999999999999999875
No 2
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=3.4e-37 Score=332.24 Aligned_cols=391 Identities=44% Similarity=0.664 Sum_probs=353.2
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhc----CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh---hhhH
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLL----LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTN 432 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~----~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~~~~ 432 (767)
.|..+++.+.+++++.+..|+..++++. ++..+.+++.|+++.|++++++.+++++|..|+++|.+++. +.+.
T Consensus 14 ~i~~lv~~l~s~~~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~~~~ 93 (434)
T d1q1sc_ 14 SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTK 93 (434)
T ss_dssp CHHHHHHHHTSSCHHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChhhhh
Confidence 6999999999999999999999999987 44468899999999999999876658999999999999987 6677
Q ss_pred HHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCC----ChHHHHHHHHHHHhh
Q 004225 433 VVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHA----KPSMLRNATKTLSRF 508 (767)
Q Consensus 433 ~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~----~~~~~~~~~~~L~~l 508 (767)
.+++.|++|.++.+|.++++++++.|+++|+|++.+++..++.+.+.|+++.++.++.... .....+.+++++.++
T Consensus 94 ~i~~~~~i~~l~~~L~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~ 173 (434)
T d1q1sc_ 94 AVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNL 173 (434)
T ss_dssp HHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHHHHHH
T ss_pred HhhhccchhhhhhccccCCHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999998999999999999999999994222 235677899999999
Q ss_pred cCCC-CCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHH
Q 004225 509 CQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPL 587 (767)
Q Consensus 509 ~~~~-~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~ 587 (767)
+... +........++++.+..++.+++++++..+++++.+++...++....+.+.++++.+++++.+.+. +++..|+
T Consensus 174 ~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~--~~~~~al 251 (434)
T d1q1sc_ 174 CRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATEL--PIVTPAL 251 (434)
T ss_dssp TCCCTTCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCH--HHHHHHH
T ss_pred hhcccccchhhhhhhHHHHHHHHHhccccchhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchh--hhhhchh
Confidence 9887 444555678899999999999999999999999999999988888888889999999999999998 9999999
Q ss_pred HHHhhhhccCCcceeeh------------------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhH
Q 004225 588 WTVRYIVKGDGFLTQCT------------------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTK 649 (767)
Q Consensus 588 ~~L~~l~~~~~~~~~~l------------------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~ 649 (767)
+++++++.+++.....+ +++..|++++++++....+....+.+.|+++.+++++.+.+++++
T Consensus 252 ~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~ 331 (434)
T d1q1sc_ 252 RAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQ 331 (434)
T ss_dssp HHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHH
T ss_pred hhhhhHHhhhhHHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccccchhHHHHhhhhhHHHHHHHHhccChHHH
Confidence 99999998776543333 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhh
Q 004225 650 KEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAA 729 (767)
Q Consensus 650 ~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 729 (767)
..|+++++|++...+.+....+.+.|++++|++++++++++++..++++|.+++..++... ..+.+...+++.
T Consensus 332 ~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~~~~~~~-------~~~~~~~~~~~~ 404 (434)
T d1q1sc_ 332 KEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLG-------ETEKLSIMIEEC 404 (434)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHTTT-------CHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcC-------CcHHHHHHHHHc
Confidence 9999999999988788999999999999999999999999999999999999998765433 456789999999
Q ss_pred chHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 004225 730 EGFKKIEDLKRHDSNGICEKAVKILEIYWS 759 (767)
Q Consensus 730 g~~~~l~~l~~~~~~~v~~~a~~~l~~~~~ 759 (767)
|+++.|+.+++|+++++++.|.++|++||.
T Consensus 405 ~~~~~i~~L~~~~n~~i~~~a~~il~~~f~ 434 (434)
T d1q1sc_ 405 GGLDKIEALQRHENESVYKASLNLIEKYFS 434 (434)
T ss_dssp TSHHHHHHHHTCSSHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999995
No 3
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=8.1e-28 Score=263.35 Aligned_cols=347 Identities=26% Similarity=0.311 Sum_probs=304.9
Q ss_pred CchHHHHhhccCCCCHHHHHHHHHHHHHHHh----hhhHHHHhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCchh
Q 004225 398 GVVARFVEFLTREDNPQLQLEAARALTNIAS----ENTNVVIDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSPRD 472 (767)
Q Consensus 398 g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~----~~~~~~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~~ 472 (767)
..++.++..+.+++ .+.+..|+..++++.. ...+.+++.|++|.|++++.. .++.++..|+|+|+|++.+++..
T Consensus 76 ~~l~~~~~~~~s~~-~~~~~~a~~~~r~~ls~~~~~~i~~ii~~g~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~ 154 (503)
T d1wa5b_ 76 QELPQMTQQLNSDD-MQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQ 154 (503)
T ss_dssp CCHHHHHHHHSCSS-HHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHhcCCC-HHHHHHHHHHHHHHHhcCCCchHHHHHHCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHH
Confidence 45788888888888 8999999999999887 346788999999999999986 67889999999999999988888
Q ss_pred HHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCC-CCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhcc
Q 004225 473 RDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSD 551 (767)
Q Consensus 473 ~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~-~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~ 551 (767)
...+.+.|+++.++.++ .+++.+++..|+|+++|++... ..+......|+++.++.++.+.+..++..++|++.+++.
T Consensus 155 ~~~~~~~g~i~~l~~lL-~s~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~ 233 (503)
T d1wa5b_ 155 TKVVVDADAVPLFIQLL-YTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCR 233 (503)
T ss_dssp HHHHHHTTCHHHHHHHH-HHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHhCCChHHHHHHh-cCCChhHHHHHHHHHHHHhhhhHHHHHHHHhhcccccchhhcccCCHHHHHHHHHHHHHHhc
Confidence 88999999999999999 7889999999999999999876 334556678999999999999999999999999999997
Q ss_pred CChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeeh------------------hhhHHHHHH
Q 004225 552 GTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCT------------------GIAKEACRT 613 (767)
Q Consensus 552 ~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l------------------~v~~~a~~~ 613 (767)
+...........++++.++.++.+.+. +++..+++++.+++.+.++....+ .++..|+.+
T Consensus 234 ~~~~~~~~~~~~~~l~~l~~~l~~~d~--~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~ 311 (503)
T d1wa5b_ 234 GKKPQPDWSVVSQALPTLAKLIYSMDT--ETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRA 311 (503)
T ss_dssp CSSSCCCHHHHGGGHHHHHHHTTCCCH--HHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHHHHHHHhccccH--HHHHHHHHHHHhhccCCchhhhhhhhhhhhhhhhhcccCCchhhhhhHHHH
Confidence 755433333446899999999999998 999999999999997766443322 778999999
Q ss_pred HhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHH
Q 004225 614 ISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVT 693 (767)
Q Consensus 614 l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~ 693 (767)
++|++.+.......+++.|+++.+..+++++++.++.+++|+++|++.+ +++....+++.|+++.++.++.+++.+++.
T Consensus 312 l~nl~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~~-~~~~~~~i~~~~~l~~li~~l~~~~~~v~~ 390 (503)
T d1wa5b_ 312 VGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITAG-NTEQIQAVIDANLIPPLVKLLEVAEYKTKK 390 (503)
T ss_dssp HHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccchHHHHHHHhcCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHHccccchhHHhcccCChhHHH
Confidence 9999999999999999999999999999999999999999999999986 788899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 004225 694 ICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYWS 759 (767)
Q Consensus 694 ~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~~ 759 (767)
.|+|+|.+++..+... ......+.+.|+++.+..++.+.++++...+.+++.+++.
T Consensus 391 ~a~~~l~nl~~~~~~~----------~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~ 446 (503)
T d1wa5b_ 391 EACWAISNASSGGLQR----------PDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILK 446 (503)
T ss_dssp HHHHHHHHHHHHTTTC----------THHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccc----------HHHHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999865432 2346677799999999999999999999999998888763
No 4
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.96 E-value=9.3e-28 Score=257.75 Aligned_cols=346 Identities=24% Similarity=0.300 Sum_probs=299.8
Q ss_pred cCchHHHHhhccCCCCHHHHHHHHHHHHHHHh--h--hhHHHHhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCch
Q 004225 397 SGVVARFVEFLTREDNPQLQLEAARALTNIAS--E--NTNVVIDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSPR 471 (767)
Q Consensus 397 ~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~--~--~~~~~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~ 471 (767)
.+.++.+++.+++++ ++.+..|+.+++++.+ . ..+.+++.|++|.|+++|++ ++++++..|+++|++++.++++
T Consensus 12 ~~~i~~lv~~l~s~~-~~~~~~a~~~l~~l~s~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~~v~~~a~~~L~~la~~~~~ 90 (434)
T d1q1sc_ 12 NWSVEDIVKGINSNN-LESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSE 90 (434)
T ss_dssp SCCHHHHHHHHTSSC-HHHHHHHHHHHHHHHHSSSCCCHHHHHHTTCHHHHHHHTTCGGGHHHHHHHHHHHHHHHTSCHH
T ss_pred hhhHHHHHHHHcCCC-HHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHhcCChh
Confidence 356889999999998 9999999999999987 3 25678899999999999976 5689999999999999998888
Q ss_pred hHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCC-CCccchhchHHHHHHHhcCCC-----HHHHHHHHHH
Q 004225 472 DRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPE-PPFDQVRPALPALAQLVHSND-----NDVLRYACEA 545 (767)
Q Consensus 472 ~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~-~~~~~~~~~i~~L~~ll~~~~-----~~v~~~a~~~ 545 (767)
.+..+++.|+++.+++++ .+++.++++.|+++|+|++.+++. .......++++.++.++...+ ......++++
T Consensus 91 ~~~~i~~~~~i~~l~~~L-~~~~~~~~~~a~~~L~nl~~~~~~~~~~i~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 169 (434)
T d1q1sc_ 91 QTKAVVDGGAIPAFISLL-ASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWT 169 (434)
T ss_dssp HHHHHHHTTHHHHHHHHT-TCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCGGGSCHHHHHHHHHH
T ss_pred hhhHhhhccchhhhhhcc-ccCCHHHHHHHHHHHHHHhccchHHHHHHHHhhhhhHHHHHHHhcccccchHHHHHHHHHH
Confidence 899999999999999999 889999999999999999987743 344566789999999997544 3566788999
Q ss_pred HHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeeh------------------hhh
Q 004225 546 LSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCT------------------GIA 607 (767)
Q Consensus 546 L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l------------------~v~ 607 (767)
+.+++.............++++.+..++.+.++ +++..|++++++++.+++.....+ .++
T Consensus 170 l~~~~~~~~~~~~~~~~~~~l~~l~~ll~~~~~--~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~ 247 (434)
T d1q1sc_ 170 LSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDP--EVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIV 247 (434)
T ss_dssp HHHHTCCCTTCCCHHHHHHHHHHHHHHTTCSCH--HHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHH
T ss_pred HHHHhhcccccchhhhhhhHHHHHHHHHhcccc--chhhhHHhhhcccchhhhhhHHHHhhcccchhcccccccchhhhh
Confidence 999998765433333345688999999999998 999999999999987765443322 788
Q ss_pred HHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCC
Q 004225 608 KEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYA 687 (767)
Q Consensus 608 ~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~ 687 (767)
..|++++++++.+++.....+++.|+++.++.++++.+++++..|++++++++.. +.+....+.+.|+++.++.++.++
T Consensus 248 ~~al~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~-~~~~~~~i~~~~~i~~li~~l~~~ 326 (434)
T d1q1sc_ 248 TPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAG-RQDQIQQVVNHGLVPFLVGVLSKA 326 (434)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTS-CHHHHHHHHHTTCHHHHHHHHHSS
T ss_pred hchhhhhhhHHhhhhHHHHHHHhccccchHHHhhcccchhhhHHHHHHHhhhccc-cchhHHHHhhhhhHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999986 678888889999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhcC
Q 004225 688 DPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYWS 759 (767)
Q Consensus 688 ~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~~ 759 (767)
+++++..|+++|.+++...+.. ....+.+.|+++.|.+++.++++++...+.+++.+++.
T Consensus 327 ~~~v~~~a~~~l~nl~~~~~~~------------~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~l~~ll~ 386 (434)
T d1q1sc_ 327 DFKTQKEAAWAITNYTSGGTVE------------QIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQ 386 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHH------------HHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHhcCCHH------------HHHHHHHCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999865432 35567789999999999999999999999999988764
No 5
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=4e-27 Score=259.56 Aligned_cols=388 Identities=16% Similarity=0.155 Sum_probs=327.0
Q ss_pred cccchHHHHhhcCHHHHHhhhcCCCHHHHHHHHHHHHHhc--CCC-hHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHH
Q 004225 348 KDDLNTTIQKLVSLPGMLAGVWSDDSGLQLEATTWFRKLL--LPP-SEKVIQSGVVARFVEFLTREDNPQLQLEAARALT 424 (767)
Q Consensus 348 ~~~~~~~~~~~~~i~~l~~~l~s~~~~~~~~a~~~L~~l~--~~~-~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~ 424 (767)
+.+......+.|++|.+++.|+++++.++..|+.+|.+++ ++. ...+.+.|+++.|+.++++++ ++++..|++++.
T Consensus 90 ~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~-~~~~~~a~~~L~ 168 (529)
T d1jdha_ 90 HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN-VKFLAITTDCLQ 168 (529)
T ss_dssp SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCC-HHHHHHHHHHHH
T ss_pred CchhHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHHHccC-hHHHHHHHHHHH
Confidence 3444455667789999999999999999999999999999 444 456678999999999999988 999999999999
Q ss_pred HHHh---hhhHHHHhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHH
Q 004225 425 NIAS---ENTNVVIDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRN 500 (767)
Q Consensus 425 ~l~~---~~~~~~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~ 500 (767)
+++. +.+..+.+.|+++.++.++.. ++..++..+++++.+++.+ ++.+..+++.|+++.++.++ .+++.+++..
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~-~~~~~~~~~~g~~~~L~~ll-~~~~~~~~~~ 246 (529)
T d1jdha_ 169 ILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVC-SSNKPAIVEAGGMQALGLHL-TDPSQRLVQN 246 (529)
T ss_dssp HHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTS-TTHHHHHHHTTHHHHHHTTT-TSSCHHHHHH
T ss_pred HHhhhhhHHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhcc-ccccchhhhhhhhhhHHHHh-cccchhhhhh
Confidence 9997 667788899999999999966 5678999999999999864 66788899999999999999 8899999999
Q ss_pred HHHHHHhhcCCCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCC
Q 004225 501 ATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFP 580 (767)
Q Consensus 501 ~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~ 580 (767)
+++++.+++... .......++++.|++++.+++.+++..+++++.+++..++.....+.+.++++.++..+......+
T Consensus 247 a~~~l~~ls~~~--~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~ 324 (529)
T d1jdha_ 247 CLWTLRNLSDAA--TKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDRE 324 (529)
T ss_dssp HHHHHHHHHTTC--TTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCH
T ss_pred hhhHHHhccccc--cchhhhhhcchhhhhhcccccHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHHHHHHHhhhcch
Confidence 999999998654 334455789999999999999999999999999999988888888889999999999886433323
Q ss_pred cccchHHHHHhhhhccCCccee---eh-------------------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHH
Q 004225 581 FGLTPPLWTVRYIVKGDGFLTQ---CT-------------------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLV 638 (767)
Q Consensus 581 ~v~~~a~~~L~~l~~~~~~~~~---~l-------------------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~ 638 (767)
+++..|++++.+++........ .+ .+...+++++.|++.. +.....+.+.|+++.++
T Consensus 325 ~~~~~a~~aL~~l~~~~~~~~~~~~~i~~~~~l~~L~~ll~~~~~~~~~~~~~~~l~~l~~~-~~~~~~l~~~g~i~~L~ 403 (529)
T d1jdha_ 325 DITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALC-PANHAPLREQGAIPRLV 403 (529)
T ss_dssp HHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTS-GGGHHHHHHTTHHHHHH
T ss_pred hHHHHHHHHhhcccchhhcchhhhhhHHhcccchhHHHHHhccchHHHHHHHHHHHhhcchh-hhhhhhhhhcccHHHHH
Confidence 7888999999999865442211 00 5677888999999876 35566788999999999
Q ss_pred HHHhcCCc----------------------hhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHH
Q 004225 639 DLLQNAEF----------------------FTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICL 696 (767)
Q Consensus 639 ~ll~~~~~----------------------~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al 696 (767)
+++.+.+. ++...++.++..++. .+.....+.+.|++++|++++.++++.++..|+
T Consensus 404 ~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~la~--~~~~r~~~~~~~~i~~Lv~lL~~~~~~v~~~a~ 481 (529)
T d1jdha_ 404 QLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILAR--DVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAA 481 (529)
T ss_dssp HHHHHHHHHHC-----------CBTTBCHHHHHHHHHHHHHHHTT--SHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHhhhhhHHhhcccchHHHHHHHHHHHHHHcc--CHHHHHHHHHCCCHHHHHHHhCCCCHHHHHHHH
Confidence 99975432 456677788888876 466667777899999999999999999999999
Q ss_pred HHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHh
Q 004225 697 KGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIY 757 (767)
Q Consensus 697 ~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~ 757 (767)
++|.++....+ .+..+.+.|+++.|.+++++++++++..|..+|.++
T Consensus 482 ~aL~~L~~~~~--------------~~~~i~~~g~~~~L~~Ll~s~n~~v~~~a~~aL~~l 528 (529)
T d1jdha_ 482 GVLCELAQDKE--------------AAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 528 (529)
T ss_dssp HHHHHHTTSHH--------------HHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhcChh--------------hHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 99999875432 366888999999999999999999999999999764
No 6
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=5.4e-27 Score=258.53 Aligned_cols=399 Identities=17% Similarity=0.140 Sum_probs=324.4
Q ss_pred cCHHHHHhhhcCCCHHHHHHHHHHHHHhc-C-CChHHHHh-cCchHHHHhhccCCCCHHHHHHHHHHHHHHHh--hhhHH
Q 004225 359 VSLPGMLAGVWSDDSGLQLEATTWFRKLL-L-PPSEKVIQ-SGVVARFVEFLTREDNPQLQLEAARALTNIAS--ENTNV 433 (767)
Q Consensus 359 ~~i~~l~~~l~s~~~~~~~~a~~~L~~l~-~-~~~~~i~~-~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~--~~~~~ 433 (767)
+++|.+++.|++++..++..|+..+.+++ . .....++. .|+++.++++|+++++++++..|+++|.+++. +.+..
T Consensus 17 ~aip~L~~lL~~~~~~v~~~A~~~l~~l~~~~~~~~~~~~~~~~v~~l~~~L~~~~~~~~~~~a~~~L~~l~~~~~~~~~ 96 (529)
T d1jdha_ 17 RAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLA 96 (529)
T ss_dssp CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccHHHHHHHHhhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHhCCchhHHH
Confidence 56999999999999999999999999999 3 33444444 47899999999876558999999999999998 77888
Q ss_pred HHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCC-
Q 004225 434 VIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK- 512 (767)
Q Consensus 434 ~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~- 512 (767)
+++.|++|.|+.+|++++++++..|+++|+|++.+++..++.+.+.|+++.|+.++ ++++++++..+++++.+++..+
T Consensus 97 i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~Lv~lL-~~~~~~~~~~a~~~L~~l~~~~~ 175 (529)
T d1jdha_ 97 IFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL-NKTNVKFLAITTDCLQILAYGNQ 175 (529)
T ss_dssp HHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGG-GCCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHhhcccchhhhHHHhcCCchHHHHHH-HccChHHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999998888888899999999999999 8899999999999999999876
Q ss_pred CCCCccchhchHHHHHHHhcC-CCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHh
Q 004225 513 PEPPFDQVRPALPALAQLVHS-NDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVR 591 (767)
Q Consensus 513 ~~~~~~~~~~~i~~L~~ll~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~ 591 (767)
.........++++.++.++.+ ++..++..+++++.+++... +....+.+.|+++.++.++.+.+. +++..+++++.
T Consensus 176 ~~~~~~~~~~~~~~L~~ll~~~~~~~~~~~~~~~l~~ls~~~-~~~~~~~~~g~~~~L~~ll~~~~~--~~~~~a~~~l~ 252 (529)
T d1jdha_ 176 ESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCS-SNKPAIVEAGGMQALGLHLTDPSQ--RLVQNCLWTLR 252 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTST-THHHHHHHTTHHHHHHTTTTSSCH--HHHHHHHHHHH
T ss_pred HHHHHHHhcccchHHHHHHHhhhhHHHHHHHHHHHhhhhccc-cccchhhhhhhhhhHHHHhcccch--hhhhhhhhHHH
Confidence 344555678899999999975 45789999999999998765 455668889999999999999988 99999999999
Q ss_pred hhhccCCcceeeh---------------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHh--cCCchhHHHHHH
Q 004225 592 YIVKGDGFLTQCT---------------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQ--NAEFFTKKEAAR 654 (767)
Q Consensus 592 ~l~~~~~~~~~~l---------------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~--~~~~~v~~~a~~ 654 (767)
+++.........- .++..|++++++++.+++.....+.+.++++.++..+. +..++++..|++
T Consensus 253 ~ls~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~~~a~~ 332 (529)
T d1jdha_ 253 NLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAIC 332 (529)
T ss_dssp HHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hccccccchhhhhhcchhhhhhcccccHHHHHHHHHHHHhhccchhHHHHHHHHhhhHHHHHHHHHhhhcchhHHHHHHH
Confidence 9985544322111 78899999999999999999999999999999999885 355688999999
Q ss_pred HHHHhhcCCC--HHHHHHHHHcCChHHHHhhhcCC-CHHHHHHHHHHHHHHHHhhhhhhccCCccc--------------
Q 004225 655 AISNAISGGT--HEQIKYLVRKGCIKPLCDLLLYA-DPEIVTICLKGLENILKVGEAEMNTGTANR-------------- 717 (767)
Q Consensus 655 ~L~nl~~~~~--~~~~~~l~~~~~i~~L~~ll~~~-~~~v~~~al~aL~~l~~~~~~~~~~~~~~~-------------- 717 (767)
+|.+++.... ......+...++++.++.+++.+ +..++..+++++.++....+......++|.
T Consensus 333 aL~~l~~~~~~~~~~~~~i~~~~~l~~L~~ll~~~~~~~~~~~~~~~l~~l~~~~~~~~~l~~~g~i~~L~~lL~~~~~~ 412 (529)
T d1jdha_ 333 ALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQD 412 (529)
T ss_dssp HHHHHTSSSTTHHHHHHHHHHTTCHHHHHHTTSTTCCHHHHHHHHHHHHHHTTSGGGHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HhhcccchhhcchhhhhhHHhcccchhHHHHHhccchHHHHHHHHHHHhhcchhhhhhhhhhhcccHHHHHHHHhcCCHH
Confidence 9999987542 22344556789999999999865 456788888888877543222111110000
Q ss_pred -----------------------------------cccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhcCCC
Q 004225 718 -----------------------------------YFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYWSCG 761 (767)
Q Consensus 718 -----------------------------------~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~~~~ 761 (767)
.....+..+.+.|+++.|.+++.+++++++..|..+|.++...+
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~la~~~~~r~~~~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~ 491 (529)
T d1jdha_ 413 TQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDK 491 (529)
T ss_dssp HC-----------CBTTBCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHTTSH
T ss_pred HHHHHHhhhhhHHhhcccchHHHHHHHHHHHHHHccCHHHHHHHHHCCCHHHHHHHhCCCCHHHHHHHHHHHHHHhcCh
Confidence 00112234557888999999999999999999999998775443
No 7
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=5.2e-23 Score=221.04 Aligned_cols=348 Identities=16% Similarity=0.146 Sum_probs=264.7
Q ss_pred CchHHHHhhccCCCCHHHHHHHHHHHHHHHh---hhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHH
Q 004225 398 GVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRD 474 (767)
Q Consensus 398 g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~ 474 (767)
+.||.|+++|++++ ++++..|+++|.+++. ++++.+.+.|++|.|+++|++++++++..|+++|++++.++++.+.
T Consensus 2 ~~ip~lv~~L~~~~-~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~~~~~~~~ 80 (457)
T d1xm9a1 2 LTIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 80 (457)
T ss_dssp CCHHHHHHHHHSSC-THHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHH
T ss_pred CCHHHHHHHhCCCC-HHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHH
Confidence 45899999999999 9999999999999997 6799999999999999999999999999999999999998899999
Q ss_pred HHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHHHh----------------cCCCHHH
Q 004225 475 LVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLV----------------HSNDNDV 538 (767)
Q Consensus 475 ~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll----------------~~~~~~v 538 (767)
.+.+.|+++.++.++....+++++..+++++.+++........... .+++.++..+ ...+..+
T Consensus 81 ~i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 159 (457)
T d1xm9a1 81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred HHHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhhHHHHHh-cccHHHHHHHHhhhhhhhcchhhhhcccccHHH
Confidence 9999999999999997778899999999999999987644333333 3444444333 2456889
Q ss_pred HHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCC----CCcccchHHHHHhhhhcc---------------C--
Q 004225 539 LRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLP----FPFGLTPPLWTVRYIVKG---------------D-- 597 (767)
Q Consensus 539 ~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~----~~~v~~~a~~~L~~l~~~---------------~-- 597 (767)
+..+++++.+++...+.....+...++++.++.++++... .......+...+.+.... .
T Consensus 160 ~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (457)
T d1xm9a1 160 FFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARN 239 (457)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhhh
Confidence 9999999999998876665555566788999888864211 002222222222111000 0
Q ss_pred ---------------------------------Ccceeeh-------------------hhhHHHHHHHhhhccCCHH--
Q 004225 598 ---------------------------------GFLTQCT-------------------GIAKEACRTISNITAGNRE-- 623 (767)
Q Consensus 598 ---------------------------------~~~~~~l-------------------~v~~~a~~~l~nl~~~~~~-- 623 (767)
......+ .+...+.+++.+++.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 319 (457)
T d1xm9a1 240 AYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMS 319 (457)
T ss_dssp --------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHH
T ss_pred hhhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhcccchHHHHHHHHHHHHHhhccccch
Confidence 0000000 4566777888888764321
Q ss_pred ---HHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcC------CCHHHHHH
Q 004225 624 ---QIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLY------ADPEIVTI 694 (767)
Q Consensus 624 ---~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~------~~~~v~~~ 694 (767)
....+.+.|+++.+++++++.+++++..+++++++++.. ++.... +..++++.+++++.. .+++++..
T Consensus 320 ~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~l~~La~~--~~~~~~-i~~~~i~~li~~L~~~~~~~~~~~~v~~~ 396 (457)
T d1xm9a1 320 SGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRH--PLLHRV-MGNQVFPEVTRLLTSHTGNTSNSEDILSS 396 (457)
T ss_dssp HHHHHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTS--GGGHHH-HHHHTHHHHHHTTTSCCSCSTTHHHHHHH
T ss_pred HHHHHHHHHHcCChHHHHhhhcCccHHHHHHHHHHHHHHhhC--hhHHHH-HHHhhHHHHHHHHhccccCcCCcHHHHHH
Confidence 233455789999999999999999999999999999985 344333 445689999998863 34579999
Q ss_pred HHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC-CChHHHHHHHHHHHHhcCCCcc
Q 004225 695 CLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH-DSNGICEKAVKILEIYWSCGVI 763 (767)
Q Consensus 695 al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~-~~~~v~~~a~~~l~~~~~~~~~ 763 (767)
|+.+|.+++... ...+..+.+.|+++.|.+++.+ +++.+++.|..+|.++|...+.
T Consensus 397 a~~~L~~l~~~~-------------~~~~~~l~~~g~i~~L~~l~~~~~~~~~~~aA~~~L~~L~~~~~~ 453 (457)
T d1xm9a1 397 ACYTVRNLMASQ-------------PQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKEL 453 (457)
T ss_dssp HHHHHHHHHTTC-------------THHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSSTTC
T ss_pred HHHHHHHHhcCC-------------HHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHcCHhh
Confidence 999999998632 2356778899999999999876 5688999999999999987754
No 8
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=2.9e-19 Score=191.29 Aligned_cols=314 Identities=16% Similarity=0.199 Sum_probs=235.0
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhc---CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh---hhhHH
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLL---LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNV 433 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~---~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~~~~~ 433 (767)
.||.+++.|++++++++..|+.+|++++ +.....+.+.|+++.|++++++++ ++++..|+++|.+++. +.+..
T Consensus 3 ~ip~lv~~L~~~~~~~~~~a~~~l~~l~~~~~~~~~~i~~~g~i~~Lv~lL~~~~-~~v~~~a~~aL~~L~~~~~~~~~~ 81 (457)
T d1xm9a1 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPN-QNVQQAAAGALRNLVFRSTTNKLE 81 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSC-HHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred CHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCcHHHHHHHHCCCC-HHHHHHHHHHHHHHHcCCHHHHHH
Confidence 6899999999999999999999999998 345888889999999999999988 9999999999999996 67888
Q ss_pred HHhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHH---------------ccCCChHH
Q 004225 434 VIDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQL---------------NKHAKPSM 497 (767)
Q Consensus 434 ~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll---------------~~~~~~~~ 497 (767)
+.+.|+++.++.++.+ .+++++..|++++.+++..... +......| ++.++..+ ....+..+
T Consensus 82 i~~~g~v~~li~~l~~~~~~~~~~~a~~~l~~l~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 159 (457)
T d1xm9a1 82 TRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDEL-KEELIADA-LPVLADRVIIPFSGWCDGNSNMSREVVDPEV 159 (457)
T ss_dssp HHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTSSST-HHHHHHHH-HHHHHHHTTHHHHTCC---------CCCHHH
T ss_pred HHHCCChHHHHHHHhccCcHHHHHHHHHHHHHHHhhhhh-HHHHHhcc-cHHHHHHHHhhhhhhhcchhhhhcccccHHH
Confidence 9999999999998866 7889999999999999976543 33333333 33333332 13346677
Q ss_pred HHHHHHHHHhhcCCCCCCC-ccch--------------------------------------------------------
Q 004225 498 LRNATKTLSRFCQGKPEPP-FDQV-------------------------------------------------------- 520 (767)
Q Consensus 498 ~~~~~~~L~~l~~~~~~~~-~~~~-------------------------------------------------------- 520 (767)
++.+++++.+++....... ....
T Consensus 160 ~~~a~~~l~~~~~~~~~~~~~~~~~~~i~~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 239 (457)
T d1xm9a1 160 FFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARN 239 (457)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC--
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHhccHHHHHHHHhcchhhhhhHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHhhhhh
Confidence 7777777766654431110 0011
Q ss_pred ------------------------------------------hchHHHHHHHhc-CCCHHHHHHHHHHHHhhccCChh--
Q 004225 521 ------------------------------------------RPALPALAQLVH-SNDNDVLRYACEALSCLSDGTND-- 555 (767)
Q Consensus 521 ------------------------------------------~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~-- 555 (767)
.++++.++.++. ..++.++..+.+++.+++.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 319 (457)
T d1xm9a1 240 AYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMS 319 (457)
T ss_dssp --------------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHH
T ss_pred hhhHHHhhhhhhhhhHHHHHHHHhhhhHHhhhhhHHHHHHHhhcHHHHHHHHHhcccchHHHHHHHHHHHHHhhccccch
Confidence 234444555443 33466777778888887755432
Q ss_pred ---HHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcC
Q 004225 556 ---KIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAG 632 (767)
Q Consensus 556 ---~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~ 632 (767)
....+.+.++++.+++++.+.+. .++..+++++++++... ..... +..+
T Consensus 320 ~~~~~~~~~~~~~l~~L~~~l~~~~~--------------------------~v~~~a~~~l~~La~~~-~~~~~-i~~~ 371 (457)
T d1xm9a1 320 SGMSQLIGLKEKGLPQIARLLQSGNS--------------------------DVVRSGASLLSNMSRHP-LLHRV-MGNQ 371 (457)
T ss_dssp HHHHHHHHTTSCCHHHHHHHTTCSCH--------------------------HHHHHHHHHHHHHHTSG-GGHHH-HHHH
T ss_pred HHHHHHHHHHcCChHHHHhhhcCccH--------------------------HHHHHHHHHHHHHhhCh-hHHHH-HHHh
Confidence 22334456889999999988887 66777777777776542 23333 3446
Q ss_pred CHHHHHHHHhcC------CchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCC-CHHHHHHHHHHHHHHHHh
Q 004225 633 VIGPLVDLLQNA------EFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYA-DPEIVTICLKGLENILKV 705 (767)
Q Consensus 633 ~i~~L~~ll~~~------~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~-~~~v~~~al~aL~~l~~~ 705 (767)
+++.++.++... +.+++..|+.+|.+++.. +++..+.+.+.|+++.|+.++++. ++.+++.|+.+|.+++..
T Consensus 372 ~i~~li~~L~~~~~~~~~~~~v~~~a~~~L~~l~~~-~~~~~~~l~~~g~i~~L~~l~~~~~~~~~~~aA~~~L~~L~~~ 450 (457)
T d1xm9a1 372 VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAS-QPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSS 450 (457)
T ss_dssp THHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTT-CTHHHHHHCCHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTSSS
T ss_pred hHHHHHHHHhccccCcCCcHHHHHHHHHHHHHHhcC-CHHHHHHHHHCCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHcC
Confidence 889999998743 246899999999999987 678888889999999999999864 678999999999999754
No 9
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=3.9e-17 Score=160.56 Aligned_cols=192 Identities=14% Similarity=0.119 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHHHHh--hhhHHHHhCCChHHHHH-hhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHH
Q 004225 413 PQLQLEAARALTNIAS--ENTNVVIDGGAVPIFVK-LLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQL 489 (767)
Q Consensus 413 ~~~~~~a~~~L~~l~~--~~~~~~~~~~~l~~L~~-lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll 489 (767)
.+.+..|+.+|.+++. +++..+...|+++.++. ++++++++++..|+++|++++.+++..+..+.+.|+++.++.++
T Consensus 31 ~~~~~~Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL 110 (264)
T d1xqra1 31 QQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLL 110 (264)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHh
Confidence 6788899999999998 78888899999999886 78889999999999999999999999999999999999999999
Q ss_pred ccCCChHHHHHHHHHHHhhcCCC-CCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHH
Q 004225 490 NKHAKPSMLRNATKTLSRFCQGK-PEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPR 568 (767)
Q Consensus 490 ~~~~~~~~~~~~~~~L~~l~~~~-~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~ 568 (767)
.+..++.+++.+++++++++.+. +........++++.++.++.+.+..++..+++++.+++...++....+.+.|+++.
T Consensus 111 ~~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~v~~ 190 (264)
T d1xqra1 111 DRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQ 190 (264)
T ss_dssp HHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHHHHHHHHHHHHHhccHHHHHHHHHhhhHHH
Confidence 66788999999999999999887 44456677899999999999999999999999999999888888888999999999
Q ss_pred HHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHH
Q 004225 569 LVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVID 630 (767)
Q Consensus 569 L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~ 630 (767)
++.++++++. +++..|++++++++..++........
T Consensus 191 L~~lL~~~~~--------------------------~~~~~a~~aL~~L~~~~~~~~~~~~~ 226 (264)
T d1xqra1 191 LVALVRTEHS--------------------------PFHEHVLGALCSLVTDFPQGVRECRE 226 (264)
T ss_dssp HHHHHTSCCS--------------------------THHHHHHHHHHHHHTTCHHHHHHHHC
T ss_pred HHHHHcCCCH--------------------------HHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 9999999998 66667777777777766666655543
No 10
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=1.9e-16 Score=155.56 Aligned_cols=228 Identities=14% Similarity=0.112 Sum_probs=185.3
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHH-HhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHH
Q 004225 492 HAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQ-LVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLV 570 (767)
Q Consensus 492 ~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~-ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~ 570 (767)
..+.+.+..|+.+|.+++.+.+........|+++.++. ++.+++++++..|+++|++++.+++.....+.+.|++|.++
T Consensus 28 ~~~~~~~~~Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv 107 (264)
T d1xqra1 28 AADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLL 107 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHcCHHHHHHHHHcCCHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHH
Confidence 34678899999999999977655566667788888875 77899999999999999999999888888888899999999
Q ss_pred HHhcC-CCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhH
Q 004225 571 KLLLH-PLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTK 649 (767)
Q Consensus 571 ~lL~~-~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~ 649 (767)
+++.+ .++ .++..|++++++++.+++.....+.+.|+++.|++++++.+..++
T Consensus 108 ~lL~~~~~~--------------------------~v~~~a~~aL~~l~~~~~~~~~~~~~~~gi~~L~~lL~~~~~~~~ 161 (264)
T d1xqra1 108 RLLDRDACD--------------------------TVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLK 161 (264)
T ss_dssp HHHHHCSCH--------------------------HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHH
T ss_pred HHhhcCCCH--------------------------HHHHHHHHHHHHHhccchhhHHHHHHhhhhhHHHHHHhcCchHHH
Confidence 99975 444 788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHh-
Q 004225 650 KEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEA- 728 (767)
Q Consensus 650 ~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~- 728 (767)
..++++|.+++.. +++....+.+.|+++.|+.+++++++++++.|+++|.+++...+.. ...+..
T Consensus 162 ~~a~~~L~~l~~~-~~~~~~~~~~~~~v~~L~~lL~~~~~~~~~~a~~aL~~L~~~~~~~-------------~~~~~~~ 227 (264)
T d1xqra1 162 VKSAFLLQNLLVG-HPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQG-------------VRECREP 227 (264)
T ss_dssp HHHHHHHHHHHHH-CGGGHHHHHHTTHHHHHHHHHTSCCSTHHHHHHHHHHHHHTTCHHH-------------HHHHHCG
T ss_pred HHHHHHHHHHHhc-cHHHHHHHHHhhhHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCHHH-------------HHHHHHh
Confidence 9999999999876 5777888899999999999999999999999999999998643221 112221
Q ss_pred -hch---HHHHHHHhcC--CChHHHHHHHHHHHHhcC
Q 004225 729 -AEG---FKKIEDLKRH--DSNGICEKAVKILEIYWS 759 (767)
Q Consensus 729 -~g~---~~~l~~l~~~--~~~~v~~~a~~~l~~~~~ 759 (767)
.+. +..+.+.... ...+..+.+..+++++|.
T Consensus 228 ~l~~~~~L~~~~~~~~~~~~~~e~~~~~~~ll~~~~~ 264 (264)
T d1xqra1 228 ELGLEELLRHRCQLLQQHEEYQEELEFCEKLLQTCFS 264 (264)
T ss_dssp GGCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcC
Confidence 122 2222222222 235566788889998884
No 11
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.59 E-value=6.2e-14 Score=155.16 Aligned_cols=363 Identities=12% Similarity=0.115 Sum_probs=265.7
Q ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHhc-CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCC
Q 004225 361 LPGMLAGVWSDDSGLQLEATTWFRKLL-LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGA 439 (767)
Q Consensus 361 i~~l~~~l~s~~~~~~~~a~~~L~~l~-~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 439 (767)
+|.+.+.+.++++.++..|+..+..++ .... ......+++.+..++++++ ..+|..++.++.+++...........+
T Consensus 205 ~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~-~~~~~~i~~~l~~~~~D~~-~~Vr~~~~~~l~~l~~~~~~~~~~~~l 282 (588)
T d1b3ua_ 205 IPMFSNLASDEQDSVRLLAVEACVNIAQLLPQ-EDLEALVMPTLRQAAEDKS-WRVRYMVADKFTELQKAVGPEITKTDL 282 (588)
T ss_dssp HHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCH-HHHHHHTHHHHHHHHTCSS-HHHHHHHHHTHHHHHHHHCHHHHHHTH
T ss_pred HHHHHHHhcCCchhhHHHHHHHHHHhhccCCH-HHHHHHHHHHHHHhccccc-HHHHHHHHHhHHHHHHHhhhhhhhhhh
Confidence 566777778888999999999888887 2111 2223346788888888887 899999999999988722222333467
Q ss_pred hHHHHHhhCCCCHHHHHHHHHHHHHHhcCCch-hHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCcc
Q 004225 440 VPIFVKLLSSPSDDVREKAVWALGNIARSSPR-DRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFD 518 (767)
Q Consensus 440 l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~-~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~ 518 (767)
++.+..++.+.++++|..|+..++.++..-.. ......-...++.+...+ .+.+..++..++.++..++..- ....
T Consensus 283 ~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~~-~d~~~~vr~~~~~~l~~~~~~~--~~~~ 359 (588)
T d1b3ua_ 283 VPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELV-SDANQHVKSALASVIMGLSPIL--GKDN 359 (588)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHHH-TCSCHHHHHHHHTTGGGGHHHH--CHHH
T ss_pred hHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHhh-cCCChHHHHHHHHHHhhhhhcc--chhH
Confidence 89999999999999999999999998854322 222233345677777887 8889999999998888876431 1122
Q ss_pred chhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhcc--
Q 004225 519 QVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKG-- 596 (767)
Q Consensus 519 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~-- 596 (767)
.....+|.+...+++++++++..++..+..+...-.. ..+ ...+++.+...+++.++ .++..++.+++.++..
T Consensus 360 ~~~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~--~~~-~~~ll~~l~~~~~d~~~--~~r~~~~~~l~~l~~~~~ 434 (588)
T d1b3ua_ 360 TIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI--RQL-SQSLLPAIVELAEDAKW--RVRLAIIEYMPLLAGQLG 434 (588)
T ss_dssp HHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH--HHH-HHHHHHHHHHHHTCSSH--HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhcch--hhh-hhHHHHHHHHHHhcccH--HHHHHHHHHHHHHHHHcC
Confidence 3456788999999999999999998888777643211 111 12478889999999988 9999999999888742
Q ss_pred CCcceeeh-------------hhhHHHHHHHhhhccC-CHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcC
Q 004225 597 DGFLTQCT-------------GIAKEACRTISNITAG-NREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISG 662 (767)
Q Consensus 597 ~~~~~~~l-------------~v~~~a~~~l~nl~~~-~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~ 662 (767)
.+.....+ .+|..|+.+++.++.. .++. ....+++.+.+++.++++.+|..++.++..+...
T Consensus 435 ~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~~~----~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~ 510 (588)
T d1b3ua_ 435 VEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEW----AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEV 510 (588)
T ss_dssp GGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCHHH----HHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHHhCcHH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 22111111 7899999999988762 2221 2234788999999999999999999999988764
Q ss_pred CCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCC
Q 004225 663 GTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHD 742 (767)
Q Consensus 663 ~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~ 742 (767)
...+ .....+++.+..+++++.+.||..++++|..+....+... + .....+.+..+++++
T Consensus 511 ~~~~----~~~~~ilp~ll~~~~D~v~nVR~~a~~~l~~i~~~~~~~~-----------~-----~~~i~~~l~~L~~D~ 570 (588)
T d1b3ua_ 511 CGQD----ITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNST-----------L-----QSEVKPILEKLTQDQ 570 (588)
T ss_dssp HHHH----HHHHHTHHHHHHGGGCSCHHHHHHHHHHHHHHGGGSCHHH-----------H-----HHHHHHHHHHHTTCS
T ss_pred cChH----HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCcHh-----------H-----HHHHHHHHHHHcCCC
Confidence 2222 2334589999999999999999999999999976433211 1 223467788899999
Q ss_pred ChHHHHHHHHHHHHh
Q 004225 743 SNGICEKAVKILEIY 757 (767)
Q Consensus 743 ~~~v~~~a~~~l~~~ 757 (767)
+.+|+..|.++++.+
T Consensus 571 d~dVr~~A~~al~~l 585 (588)
T d1b3ua_ 571 DVDVKYFAQEALTVL 585 (588)
T ss_dssp SHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999865
No 12
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=4e-13 Score=146.91 Aligned_cols=349 Identities=16% Similarity=0.173 Sum_probs=246.7
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh-hhhHHHHhCC
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS-ENTNVVIDGG 438 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~ 438 (767)
.+|.+++.+.+++.+.+.-+.-++..++....+..+ -+++.+.+-+.+++ +.+|..|+++++++.. +..+.
T Consensus 47 l~~~vi~~~~s~d~~~Kkl~yl~l~~~~~~~~d~~~--l~intl~kDl~d~n-~~iR~lALr~L~~i~~~~i~~~----- 118 (579)
T d2vglb_ 47 LFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAI--MAVNSFVKDCEDPN-PLIRALAVRTMGCIRVDKITEY----- 118 (579)
T ss_dssp GHHHHHHTTSSSCHHHHHHHHHHHHHHHHHSHHHHH--TTHHHHGGGSSSSS-HHHHHHHHHHHHTCCSGGGHHH-----
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHhCcCCccHHH--HHHHHHHHHcCCCC-HHHHHHHHHHHHcCCCHHHHHH-----
Confidence 588899999999999999998888888832223222 35899999999998 9999999999988765 43333
Q ss_pred ChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCC-c
Q 004225 439 AVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPP-F 517 (767)
Q Consensus 439 ~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~-~ 517 (767)
.++.+.+.+.++++.||..|+.+++++...+++. +...+.++.+..++ .++++.++.+|+.++..++...+... .
T Consensus 119 l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~p~~---~~~~~~~~~L~~lL-~D~n~~V~~~Al~~L~~I~~~~~~~~~~ 194 (579)
T d2vglb_ 119 LCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQM---VEDQGFLDSLRDLI-ADSNPMVVANAVAALSEISESHPNSNLL 194 (579)
T ss_dssp HHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCC---HHHHHHHHHHHHTT-SCSCHHHHHHHHHHHHHHTTSCCSCCSC
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHhccChhh---hhhhhHHHHHHHHH-cCCChHHHHHHHHHHHHHHHhCccchhH
Confidence 4688889999999999999999999999777754 33456778888888 88999999999999999998764433 3
Q ss_pred cchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcC----------------------
Q 004225 518 DQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLH---------------------- 575 (767)
Q Consensus 518 ~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~---------------------- 575 (767)
......++.++..+.+.++..+..++.++..++.........+ ++.+...+++
T Consensus 195 ~l~~~~i~~Ll~~l~~~~~~~q~~il~~L~~~~~~~~~~~~~l-----i~~l~~~L~~~n~~V~~~a~~~i~~~~~~~~~ 269 (579)
T d2vglb_ 195 DLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI-----CERVTPRLSHANSAVVLSAVKVLMKFLELLPK 269 (579)
T ss_dssp CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHTSCCCSHHHHHHH-----HHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCB
T ss_pred HhhHHHHHHHHhccCCCCHHHHHHHHHHHHHhCCCCHHHHHHH-----HHHHHHHHcCchHHHHHHHHHHHHHHHhcCCc
Confidence 3456678888888888888888888888888776554332222 2222222333
Q ss_pred ---------------------CCCCCcccchHHHHHhhhhccCCcce-ee-----------hhhhHHHHHHHhhhccCCH
Q 004225 576 ---------------------PLPFPFGLTPPLWTVRYIVKGDGFLT-QC-----------TGIAKEACRTISNITAGNR 622 (767)
Q Consensus 576 ---------------------~~~~~~v~~~a~~~L~~l~~~~~~~~-~~-----------l~v~~~a~~~l~nl~~~~~ 622 (767)
.++ +++..|++.+..++...+... .. ..++..++.++..++....
T Consensus 270 ~~~~~~~~~~~l~~~l~~L~s~~~--ei~y~aL~~i~~l~~~~p~~l~~~~~~~~~~~~d~~~ik~~~L~iL~~l~~~~n 347 (579)
T d2vglb_ 270 DSDYYNMLLKKLAPPLVTLLSGEP--EVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQAN 347 (579)
T ss_dssp TTBSHHHHHHHTHHHHHHHTTSCH--HHHHHHHHHHHHHHHHCCSTTTTCTTTTSCCTTSCHHHHHHHHHHHHHTCCSST
T ss_pred chHHHHHHHHHhhHHHHHHhcCCc--hHHHHHHHHHHHHHHhCHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHcChhh
Confidence 333 555555555555553332211 00 0566667777766665321
Q ss_pred HHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHH
Q 004225 623 EQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENI 702 (767)
Q Consensus 623 ~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l 702 (767)
.. .+++.|.+.+.+.+.++++.++.+++.++.. .+..... +++.|++++.+++..++..+..++.++
T Consensus 348 --~~-----~Il~eL~~y~~~~d~~~~~~ai~aI~~la~~-~~~~~~~-----~i~~Ll~ll~~~~~~v~~e~i~~i~~i 414 (579)
T d2vglb_ 348 --IA-----QVLAELKEYATEVDVDFVRKAVRAIGRCAIK-VEQSAER-----CVSTLLDLIQTKVNYVVQEAIVVIRDI 414 (579)
T ss_dssp --HH-----HHHHHHHHHTTSSCHHHHHHHHHHHHHHHTT-CHHHHHH-----HHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred --HH-----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHh-CchHHHH-----HHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 11 1466778888888999999999999999987 4454444 577899999999999999999999999
Q ss_pred HHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC-CChHHHHHHHHHHHHhc
Q 004225 703 LKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH-DSNGICEKAVKILEIYW 758 (767)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~-~~~~v~~~a~~~l~~~~ 758 (767)
+...+.. ..+.+..+.+.+.+ ++++++..+.|++.+|-
T Consensus 415 ~~~~p~~------------------~~~ii~~L~~~l~~~~~~~~~~~~iwilGEy~ 453 (579)
T d2vglb_ 415 FRKYPNK------------------YESIIATLCENLDSLDEPDARAAMIWIVGEYA 453 (579)
T ss_dssp HHHSCSS------------------CCTTHHHHHHTTTTCCSHHHHHHHHHHHHTTC
T ss_pred HHhChHH------------------HHHHHHHHHHHHHhcCcHHHHHHHHHHHhCcc
Confidence 8754321 11233444444433 56667777777776663
No 13
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=2.4e-13 Score=150.35 Aligned_cols=364 Identities=12% Similarity=0.081 Sum_probs=263.5
Q ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHhc-CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCC
Q 004225 361 LPGMLAGVWSDDSGLQLEATTWFRKLL-LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGA 439 (767)
Q Consensus 361 i~~l~~~l~s~~~~~~~~a~~~L~~l~-~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 439 (767)
++.+.+.+++.++.++..|+..+..++ .... ......+++.+..++++++ +.+|..|+.++..++...........+
T Consensus 166 ~~~~~~l~~D~~~~VR~~a~~~l~~~~~~~~~-~~~~~~l~~~l~~l~~d~~-~~vr~~a~~~l~~i~~~~~~~~~~~~i 243 (588)
T d1b3ua_ 166 RQYFRNLCSDDTPMVRRAAASKLGEFAKVLEL-DNVKSEIIPMFSNLASDEQ-DSVRLLAVEACVNIAQLLPQEDLEALV 243 (588)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCH-HHHHHTHHHHHHHHHTCSC-HHHHTTHHHHHHHHHHHSCHHHHHHHT
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcH-HHHHHHHHHHHHHHhcCCc-hhhHHHHHHHHHHhhccCCHHHHHHHH
Confidence 566777888999999999999999998 3333 3344577888888888888 899999999999998711111122236
Q ss_pred hHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCC--Cc
Q 004225 440 VPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEP--PF 517 (767)
Q Consensus 440 l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~--~~ 517 (767)
+|.+..+++++++.+|..++.++++++.... ........++.+..++ .+.+.+++..++.++..++..-... ..
T Consensus 244 ~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~~---~~~~~~~l~~~l~~ll-~d~~~~vr~~a~~~l~~~~~~l~~~~~~~ 319 (588)
T d1b3ua_ 244 MPTLRQAAEDKSWRVRYMVADKFTELQKAVG---PEITKTDLVPAFQNLM-KDCEAEVRAAASHKVKEFCENLSADCREN 319 (588)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHTHHHHHHHHC---HHHHHHTHHHHHHHHH-TCSSHHHHHHHHHHHHHHHHTSCTTTHHH
T ss_pred HHHHHHhcccccHHHHHHHHHhHHHHHHHhh---hhhhhhhhhHHHHHHH-hccchHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 8899999999999999999999999984322 2233445788888888 8899999999999999988764222 22
Q ss_pred cchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccC
Q 004225 518 DQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGD 597 (767)
Q Consensus 518 ~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~ 597 (767)
.....++|.+...+.+.+..++..++.++..++..-... . . ...++|.+...+++.+. +++..++..++.+...-
T Consensus 320 ~~~~~i~~~l~~~~~d~~~~vr~~~~~~l~~~~~~~~~~-~-~-~~~l~p~l~~~l~d~~~--~v~~~~~~~l~~~~~~~ 394 (588)
T d1b3ua_ 320 VIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKD-N-T-IEHLLPLFLAQLKDECP--EVRLNIISNLDCVNEVI 394 (588)
T ss_dssp HHHHTHHHHHHHHHTCSCHHHHHHHHTTGGGGHHHHCHH-H-H-HHHTHHHHHHHHTCSCH--HHHHHHHTTCHHHHHHS
T ss_pred hhHHHHHHHHHHhhcCCChHHHHHHHHHHhhhhhccchh-H-H-HHHHHHHHHHHHHhhhh--hhhhHHHHHHHHHHhhc
Confidence 344678899999999999999999998888876332111 1 1 12478999999999888 88888888777665322
Q ss_pred C--cceeeh-------------hhhHHHHHHHhhhccC-CHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhc
Q 004225 598 G--FLTQCT-------------GIAKEACRTISNITAG-NREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAIS 661 (767)
Q Consensus 598 ~--~~~~~l-------------~v~~~a~~~l~nl~~~-~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~ 661 (767)
. ...+.+ .++..++..++.++.. ..+ .+...+.+.+..++.+....||..|+.+++.++.
T Consensus 395 ~~~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~~~~~----~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~ 470 (588)
T d1b3ua_ 395 GIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVE----FFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVE 470 (588)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCGG----GCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHH
T ss_pred chhhhhhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHcChH----hHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHH
Confidence 1 111111 4556666665555431 000 1112245667777888889999999999999986
Q ss_pred CCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC
Q 004225 662 GGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH 741 (767)
Q Consensus 662 ~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~ 741 (767)
...++. ....+++.+.+++.+++...|..++.++..+....... ......++.+.++..+
T Consensus 471 ~~~~~~----~~~~i~~~l~~~~~~~~~~~R~~~~~~l~~l~~~~~~~----------------~~~~~ilp~ll~~~~D 530 (588)
T d1b3ua_ 471 KFGKEW----AHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQD----------------ITTKHMLPTVLRMAGD 530 (588)
T ss_dssp HHCHHH----HHHHTHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHH----------------HHHHHTHHHHHHGGGC
T ss_pred HhCcHH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHcChH----------------HHHHHHHHHHHHHcCC
Confidence 433332 22347888999999999999999999999988643321 1233468888999999
Q ss_pred CChHHHHHHHHHHHHhcC
Q 004225 742 DSNGICEKAVKILEIYWS 759 (767)
Q Consensus 742 ~~~~v~~~a~~~l~~~~~ 759 (767)
+.++||..|.+++..++.
T Consensus 531 ~v~nVR~~a~~~l~~i~~ 548 (588)
T d1b3ua_ 531 PVANVRFNVAKSLQKIGP 548 (588)
T ss_dssp SCHHHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999888754
No 14
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.43 E-value=4.7e-12 Score=131.54 Aligned_cols=290 Identities=13% Similarity=0.181 Sum_probs=150.3
Q ss_pred CCCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCC
Q 004225 5 IQNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTG 84 (767)
Q Consensus 5 l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~ 84 (767)
+.+|++|+++++. ++.+. .+..+++|++|+++++. ++++ +.+..+++|++|++++++ +.+++.
T Consensus 43 l~~l~~L~l~~~~-I~~l~---gl~~L~nL~~L~Ls~N~-l~~l----------~~l~~L~~L~~L~L~~n~-i~~i~~- 105 (384)
T d2omza2 43 LDQVTTLQADRLG-IKSID---GVEYLNNLTQINFSNNQ-LTDI----------TPLKNLTKLVDILMNNNQ-IADITP- 105 (384)
T ss_dssp HTTCCEEECCSSC-CCCCT---TGGGCTTCCEEECCSSC-CCCC----------GGGTTCTTCCEEECCSSC-CCCCGG-
T ss_pred hCCCCEEECCCCC-CCCcc---ccccCCCCCEEeCcCCc-CCCC----------ccccCCcccccccccccc-cccccc-
Confidence 4678999998874 55542 23578889999998884 6665 236678899999998875 444432
Q ss_pred CCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccc-----------------------cccccCC--
Q 004225 85 DLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVV-----------------------TNKYHLG-- 139 (767)
Q Consensus 85 ~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~-----------------------~~~~~~~-- 139 (767)
...+++|+.|++.++....... . .....+..+....+... .......
T Consensus 106 ---l~~l~~L~~L~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (384)
T d2omza2 106 ---LANLTNLTGLTLFNNQITDIDP-L----KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTL 177 (384)
T ss_dssp ---GTTCTTCCEEECCSSCCCCCGG-G----TTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTC
T ss_pred ---cccccccccccccccccccccc-c----cccccccccccccccccccccccccccccccccccccchhhhhcccccc
Confidence 4568888888887654322110 0 11122222222111000 0000000
Q ss_pred ----CcchhcchhhHhhhccccceeeecCCCC--CCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCcc
Q 004225 140 ----DERTILSLGDFLQRLHTMKVLQIGGYSA--SLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDHL 213 (767)
Q Consensus 140 ----~~~~~~~~~~~~~~l~~L~~L~l~~~~~--~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~ 213 (767)
..............+++++.+.++++.. ..+......++.+.+.++. ++.+ +....+++|++|++.++. +
T Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~-l~~~--~~l~~l~~L~~L~l~~n~-l 253 (384)
T d2omza2 178 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ-LKDI--GTLASLTNLTDLDLANNQ-I 253 (384)
T ss_dssp CEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSC-CCCC--GGGGGCTTCSEEECCSSC-C
T ss_pred ccccccccccccccccccccccceeeccCCccCCCCcccccCCCCEEECCCCC-CCCc--chhhcccccchhccccCc-c
Confidence 0000001112345556666666665432 3334445566666666653 3333 223345667777776654 2
Q ss_pred ccccCCCCcCCCCCEEEeccCccchhhcCc-------------------hhhhccccCcEEeEccccccchhcccccccc
Q 004225 214 VNLVPPSTSFQNLTNMVVSRCNNLKIVLTS-------------------LIAKTLVRLRYMKIKSCDRITEIVQGDDVVA 274 (767)
Q Consensus 214 ~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~-------------------~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~ 274 (767)
..+. ....+++|++|++++++ +..+++. .....+++++.|+++++. ++.++. ..
T Consensus 254 ~~~~-~~~~~~~L~~L~l~~~~-l~~~~~~~~~~~l~~l~~~~n~l~~~~~~~~~~~l~~L~ls~n~-l~~l~~-l~--- 326 (384)
T d2omza2 254 SNLA-PLSGLTKLTELKLGANQ-ISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNN-ISDISP-VS--- 326 (384)
T ss_dssp CCCG-GGTTCTTCSEEECCSSC-CCCCGGGTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSC-CSCCGG-GG---
T ss_pred CCCC-cccccccCCEeeccCcc-cCCCCccccccccccccccccccccccccchhcccCeEECCCCC-CCCCcc-cc---
Confidence 3222 24455666666665543 2222110 112335555566555542 333321 11
Q ss_pred ccccccccccceEeecCCCCcccccCCCccccCCccceEeecCCCCcccccccCCCCcccchhhccc
Q 004225 275 KDEVITFRELKELKLVDLERLTSFCSGNCAFKFPSLERLVVDDCPDMKIFSEGKLSTPKLHKVERHG 341 (767)
Q Consensus 275 ~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~L~~L~i~~c~~l~~~~~~~~~~~~L~~l~i~~ 341 (767)
.+|+|++|+++++ +++.++. ...+|+|++|++++| .++.++. ....++|+.+++++
T Consensus 327 -----~l~~L~~L~L~~n-~l~~l~~---l~~l~~L~~L~l~~N-~l~~l~~-l~~l~~L~~L~L~~ 382 (384)
T d2omza2 327 -----SLTKLQRLFFANN-KVSDVSS---LANLTNINWLSAGHN-QISDLTP-LANLTRITQLGLND 382 (384)
T ss_dssp -----GCTTCCEEECCSS-CCCCCGG---GGGCTTCCEEECCSS-CCCBCGG-GTTCTTCSEEECCC
T ss_pred -----cCCCCCEEECCCC-CCCCChh---HcCCCCCCEEECCCC-cCCCChh-hccCCCCCEeeCCC
Confidence 2677777777776 5555541 245777777777766 4555443 22334666666653
No 15
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=7.1e-14 Score=137.96 Aligned_cols=191 Identities=17% Similarity=0.195 Sum_probs=124.1
Q ss_pred cCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcccCCCCccEEEeccCCccccc
Q 004225 29 SSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVR 108 (767)
Q Consensus 29 ~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~ 108 (767)
....+|++|++++|. +.. +.+......+++|++|++.+|+ +.+..... ...+++|++|++++|..+++.
T Consensus 43 ~~~~~L~~LdLs~~~-i~~-------~~l~~l~~~c~~L~~L~L~~~~-l~~~~~~~--l~~~~~L~~L~Ls~c~~itd~ 111 (284)
T d2astb2 43 FSPFRVQHMDLSNSV-IEV-------STLHGILSQCSKLQNLSLEGLR-LSDPIVNT--LAKNSNLVRLNLSGCSGFSEF 111 (284)
T ss_dssp CCCBCCCEEECTTCE-ECH-------HHHHHHHTTBCCCSEEECTTCB-CCHHHHHH--HTTCTTCSEEECTTCBSCCHH
T ss_pred ccCCCCCEEECCCCc-cCH-------HHHHHHHHhCCCcccccccccC-CCcHHHHH--HhcCCCCcCcccccccccccc
Confidence 356689999998875 221 2222345568899999999985 43322111 346789999999999888754
Q ss_pred ccccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhh-ccccceeeecCCCCCCCcccccCCceeeeeeccc
Q 004225 109 TTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQR-LHTMKVLQIGGYSASLPYEKVENGMWVEIREAFH 187 (767)
Q Consensus 109 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~ 187 (767)
...... ..+++|++|++++|..+++ ..+...+.. .++|+.|.+++|....... .
T Consensus 112 ~l~~l~-~~~~~L~~L~ls~c~~~~~----------~~~~~~~~~~~~~L~~L~l~~~~~~i~~~--------------~ 166 (284)
T d2astb2 112 ALQTLL-SSCSRLDELNLSWCFDFTE----------KHVQVAVAHVSETITQLNLSGYRKNLQKS--------------D 166 (284)
T ss_dssp HHHHHH-HHCTTCCEEECCCCTTCCH----------HHHHHHHHHSCTTCCEEECCSCGGGSCHH--------------H
T ss_pred ccchhh-HHHHhcccccccccccccc----------ccchhhhcccccccchhhhcccccccccc--------------c
Confidence 321111 3579999999998876443 112222333 3578888887764221110 0
Q ss_pred ccchhhccccccccccEEEecCCCccccc-cCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccc
Q 004225 188 LEHILIRESSVTNNLVILRVKGCDHLVNL-VPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSC 260 (767)
Q Consensus 188 l~~~~~~~~~~~~~L~~L~i~~~~~~~~~-~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c 260 (767)
+..+ ...+++|++|++++|..+++. +.....+++|++|++++|+.+++..... ..++++|++|++.+|
T Consensus 167 l~~l----~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~-L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 167 LSTL----VRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLE-LGEIPTLKTLQVFGI 235 (284)
T ss_dssp HHHH----HHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTS
T ss_pred cccc----ccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHH-HhcCCCCCEEeeeCC
Confidence 1111 233688999999998877532 3345678999999999999887765443 356899999999988
No 16
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.41 E-value=5.8e-12 Score=130.80 Aligned_cols=256 Identities=13% Similarity=0.177 Sum_probs=151.1
Q ss_pred CCCCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccC
Q 004225 4 GIQNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCT 83 (767)
Q Consensus 4 ~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~ 83 (767)
.|++|++|+++++ .++.+++ +..+++|++|+++++. +.++ ..+..+++|+.|++.++.. ...+.
T Consensus 64 ~L~nL~~L~Ls~N-~l~~l~~---l~~L~~L~~L~L~~n~-i~~i----------~~l~~l~~L~~L~~~~~~~-~~~~~ 127 (384)
T d2omza2 64 YLNNLTQINFSNN-QLTDITP---LKNLTKLVDILMNNNQ-IADI----------TPLANLTNLTGLTLFNNQI-TDIDP 127 (384)
T ss_dssp GCTTCCEEECCSS-CCCCCGG---GTTCTTCCEEECCSSC-CCCC----------GGGTTCTTCCEEECCSSCC-CCCGG
T ss_pred cCCCCCEEeCcCC-cCCCCcc---ccCCcccccccccccc-cccc----------ccccccccccccccccccc-ccccc
Confidence 5889999999998 4777754 4689999999999985 5444 2355678888888765321 11110
Q ss_pred CCC-------------------------------------------------------------cccCCCCccEEEeccC
Q 004225 84 GDL-------------------------------------------------------------DILEFPSLKELRISKC 102 (767)
Q Consensus 84 ~~~-------------------------------------------------------------~~~~~~~L~~L~l~~c 102 (767)
... ....+++++.+.++++
T Consensus 128 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n 207 (384)
T d2omza2 128 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNN 207 (384)
T ss_dssp GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSS
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCC
Confidence 000 0112333444444333
Q ss_pred CcccccccccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecCCCC--CCCcccccCCcee
Q 004225 103 PEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGGYSA--SLPYEKVENGMWV 180 (767)
Q Consensus 103 ~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~--~~~~~~~~~l~~l 180 (767)
. +... .+....++|++|+++++.. .+ ...+..+++|+.+.++++.. ..++..++.++.+
T Consensus 208 ~-i~~~----~~~~~~~~L~~L~l~~n~l-~~-------------~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L 268 (384)
T d2omza2 208 Q-ISDI----TPLGILTNLDELSLNGNQL-KD-------------IGTLASLTNLTDLDLANNQISNLAPLSGLTKLTEL 268 (384)
T ss_dssp C-CCCC----GGGGGCTTCCEEECCSSCC-CC-------------CGGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEE
T ss_pred c-cCCC----CcccccCCCCEEECCCCCC-CC-------------cchhhcccccchhccccCccCCCCcccccccCCEe
Confidence 2 1111 1112344555555554431 11 01244556666666666543 2234445566666
Q ss_pred eeeecccccchhhccccccccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccc
Q 004225 181 EIREAFHLEHILIRESSVTNNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSC 260 (767)
Q Consensus 181 ~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c 260 (767)
.+.++. +..+ .....++.++.+.+.++.. .. ......+++++.|+++++ +++++.+ +..+++|++|++++|
T Consensus 269 ~l~~~~-l~~~--~~~~~~~~l~~l~~~~n~l-~~-~~~~~~~~~l~~L~ls~n-~l~~l~~---l~~l~~L~~L~L~~n 339 (384)
T d2omza2 269 KLGANQ-ISNI--SPLAGLTALTNLELNENQL-ED-ISPISNLKNLTYLTLYFN-NISDISP---VSSLTKLQRLFFANN 339 (384)
T ss_dssp ECCSSC-CCCC--GGGTTCTTCSEEECCSSCC-SC-CGGGGGCTTCSEEECCSS-CCSCCGG---GGGCTTCCEEECCSS
T ss_pred eccCcc-cCCC--Ccccccccccccccccccc-cc-ccccchhcccCeEECCCC-CCCCCcc---cccCCCCCEEECCCC
Confidence 665443 2222 2233456666666655432 22 223566789999999987 4566542 457999999999998
Q ss_pred cccchhccccccccccccccccccceEeecCCCCcccccCCCccccCCccceEeecC
Q 004225 261 DRITEIVQGDDVVAKDEVITFRELKELKLVDLERLTSFCSGNCAFKFPSLERLVVDD 317 (767)
Q Consensus 261 ~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~L~~L~i~~ 317 (767)
. ++.++ .... +++|+.|+++++ ++++++. ...+++|+.|++++
T Consensus 340 ~-l~~l~-~l~~--------l~~L~~L~l~~N-~l~~l~~---l~~l~~L~~L~L~~ 382 (384)
T d2omza2 340 K-VSDVS-SLAN--------LTNINWLSAGHN-QISDLTP---LANLTRITQLGLND 382 (384)
T ss_dssp C-CCCCG-GGGG--------CTTCCEEECCSS-CCCBCGG---GTTCTTCSEEECCC
T ss_pred C-CCCCh-hHcC--------CCCCCEEECCCC-cCCCChh---hccCCCCCEeeCCC
Confidence 4 66654 2333 899999999886 5777652 35789999999876
No 17
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.39 E-value=1.2e-11 Score=123.54 Aligned_cols=91 Identities=14% Similarity=0.159 Sum_probs=55.6
Q ss_pred CccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcccCCCCccEE
Q 004225 18 NLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKEL 97 (767)
Q Consensus 18 ~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L 97 (767)
+++.+|+ ++ .+++++|+++++. ++++.. ..+..+++|++|++.+++-. .++... ...+++|+.|
T Consensus 21 ~L~~lP~-~l---~~~l~~L~Ls~N~-i~~l~~--------~~f~~l~~L~~L~l~~n~~~-~i~~~~--f~~l~~L~~L 84 (305)
T d1xkua_ 21 GLEKVPK-DL---PPDTALLDLQNNK-ITEIKD--------GDFKNLKNLHTLILINNKIS-KISPGA--FAPLVKLERL 84 (305)
T ss_dssp CCCSCCC-SC---CTTCCEEECCSSC-CCCBCT--------TTTTTCTTCCEEECCSSCCC-CBCTTT--TTTCTTCCEE
T ss_pred CCCccCC-CC---CCCCCEEECcCCc-CCCcCh--------hHhhcccccccccccccccc-ccchhh--hhCCCccCEe
Confidence 3666643 32 2568888888873 655511 23456788888888887533 343322 3467888888
Q ss_pred EeccCCcccccccccccccccCCCceeeeCCcc
Q 004225 98 RISKCPEFMVRTTSIFTERVFPNLEKLKVDAKH 130 (767)
Q Consensus 98 ~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~ 130 (767)
++.++. ++... ....+.|+.|...++.
T Consensus 85 ~l~~n~-l~~l~-----~~~~~~l~~L~~~~n~ 111 (305)
T d1xkua_ 85 YLSKNQ-LKELP-----EKMPKTLQELRVHENE 111 (305)
T ss_dssp ECCSSC-CSBCC-----SSCCTTCCEEECCSSC
T ss_pred cccCCc-cCcCc-----cchhhhhhhhhccccc
Confidence 888874 33322 1245677888777654
No 18
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=2.3e-12 Score=140.84 Aligned_cols=358 Identities=14% Similarity=0.128 Sum_probs=242.3
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCC
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGA 439 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~ 439 (767)
.++.+.+-+.++++.++-.|++.++.+..+..-. -+++.+.+.+.+++ +.+|..|+.++.++.....+.+...+.
T Consensus 84 ~intl~kDl~d~n~~iR~lALr~L~~i~~~~i~~----~l~~~l~~~L~D~~-p~VRk~Aa~~l~kl~~~~p~~~~~~~~ 158 (579)
T d2vglb_ 84 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE----YLCEPLRKCLKDED-PYVRKTAAVCVAKLHDINAQMVEDQGF 158 (579)
T ss_dssp THHHHGGGSSSSSHHHHHHHHHHHHTCCSGGGHH----HHHHHHHHHSSCSC-HHHHHHHHHHHHHHHHSSCCCHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHcCCCHHHHH----HHHHHHHHHHhcCc-HHHHHHHHHHHHHHhccChhhhhhhhH
Confidence 6889999999999999999999999877443222 24688889999988 999999999999998822233334567
Q ss_pred hHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccc
Q 004225 440 VPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQ 519 (767)
Q Consensus 440 l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~ 519 (767)
++.+..++.++++.++..|+.++..++...+...-.-+..+.+..++..+ ...++..+..++.++.++.... ...
T Consensus 159 ~~~L~~lL~D~n~~V~~~Al~~L~~I~~~~~~~~~~~l~~~~i~~Ll~~l-~~~~~~~q~~il~~L~~~~~~~----~~~ 233 (579)
T d2vglb_ 159 LDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTAL-NECTEWGQIFILDCLSNYNPKD----DRE 233 (579)
T ss_dssp HHHHHHTTSCSCHHHHHHHHHHHHHHTTSCCSCCSCCCHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTSCCCS----HHH
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHhCccchhHHhhHHHHHHHHhcc-CCCCHHHHHHHHHHHHHhCCCC----HHH
Confidence 89999999999999999999999999865543211011123466777777 6788899999999998876443 223
Q ss_pred hhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCCh---hHHHHHHh-----------c------CcHHHHHHHhcC----
Q 004225 520 VRPALPALAQLVHSNDNDVLRYACEALSCLSDGTN---DKIQAVIE-----------A------DVCPRLVKLLLH---- 575 (767)
Q Consensus 520 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~---~~~~~~~~-----------~------~~~~~L~~lL~~---- 575 (767)
....++.+...+++.++.++..++.++..+....+ .....+.+ . -++..+..+...
T Consensus 234 ~~~li~~l~~~L~~~n~~V~~~a~~~i~~~~~~~~~~~~~~~~~~~~l~~~l~~L~s~~~ei~y~aL~~i~~l~~~~p~~ 313 (579)
T d2vglb_ 234 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEI 313 (579)
T ss_dssp HHHHHHHHTTCSCSSTTHHHHHHHHHHHHSCCSCCBTTBSHHHHHHHTHHHHHHHTTSCHHHHHHHHHHHHHHHHHCCST
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHhhHHHHHHhcCCchHHHHHHHHHHHHHHhCHHH
Confidence 34566777777788888888888888776543211 10000000 0 012222222110
Q ss_pred -----------CCCCCcccchHHHHHhhhhccCCcceeeh------------hhhHHHHHHHhhhccCCHHHHHHHHHcC
Q 004225 576 -----------PLPFPFGLTPPLWTVRYIVKGDGFLTQCT------------GIAKEACRTISNITAGNREQIQVVIDAG 632 (767)
Q Consensus 576 -----------~~~~~~v~~~a~~~L~~l~~~~~~~~~~l------------~v~~~a~~~l~nl~~~~~~~~~~~~~~~ 632 (767)
.+.+..++..++.++..++.... ....+ ++++.++.+++.++...+...+.
T Consensus 314 l~~~~~~~~~~~~d~~~ik~~~L~iL~~l~~~~n-~~~Il~eL~~y~~~~d~~~~~~ai~aI~~la~~~~~~~~~----- 387 (579)
T d2vglb_ 314 LKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQAN-IAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER----- 387 (579)
T ss_dssp TTTCTTTTSCCTTSCHHHHHHHHHHHHHTCCSST-HHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCHHHHHH-----
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHHHHcChhh-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhCchHHHH-----
Confidence 01112567788888888874322 21111 78999999999999877665543
Q ss_pred CHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcC-CCHHHHHHHHHHHHHHHHhhhhhhc
Q 004225 633 VIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLY-ADPEIVTICLKGLENILKVGEAEMN 711 (767)
Q Consensus 633 ~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~-~~~~v~~~al~aL~~l~~~~~~~~~ 711 (767)
+++.+++++......++.+++.++.++... .++. ...+++.+.+.+++ .+++++..++|+++......++
T Consensus 388 ~i~~Ll~ll~~~~~~v~~e~i~~i~~i~~~-~p~~-----~~~ii~~L~~~l~~~~~~~~~~~~iwilGEy~~~i~~--- 458 (579)
T d2vglb_ 388 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRK-YPNK-----YESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN--- 458 (579)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-SCSS-----CCTTHHHHHHTTTTCCSHHHHHHHHHHHHTTCTTCTT---
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHh-ChHH-----HHHHHHHHHHHHHhcCcHHHHHHHHHHHhCccccccc---
Confidence 577899999999999999999999998764 2221 24578888888876 6788999999998876532111
Q ss_pred cCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 004225 712 TGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYW 758 (767)
Q Consensus 712 ~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~ 758 (767)
.... ++.+.+-..+++++||..+..++-++|
T Consensus 459 ----------~~~l------l~~l~~~f~~e~~~vq~~iLta~~Kl~ 489 (579)
T d2vglb_ 459 ----------ADEL------LESFLEGFHDESTQVQLTLLTAIVKLF 489 (579)
T ss_dssp ----------HHHH------HHHHSTTCSSSCHHHHHHHHHHHHHHH
T ss_pred ----------HHHH------HHHHHHhhhhCCHHHHHHHHHHHHHHH
Confidence 1111 222222334566777777777777654
No 19
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=3.7e-13 Score=132.74 Aligned_cols=215 Identities=15% Similarity=0.139 Sum_probs=139.0
Q ss_pred CCCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcc
Q 004225 63 MFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDER 142 (767)
Q Consensus 63 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 142 (767)
...+|++|++++|.--.+.... + ...+++|++|++++|+ +.+.....+ ..+++|++|++++|..+++
T Consensus 44 ~~~~L~~LdLs~~~i~~~~l~~-l-~~~c~~L~~L~L~~~~-l~~~~~~~l--~~~~~L~~L~Ls~c~~itd-------- 110 (284)
T d2astb2 44 SPFRVQHMDLSNSVIEVSTLHG-I-LSQCSKLQNLSLEGLR-LSDPIVNTL--AKNSNLVRLNLSGCSGFSE-------- 110 (284)
T ss_dssp CCBCCCEEECTTCEECHHHHHH-H-HTTBCCCSEEECTTCB-CCHHHHHHH--TTCTTCSEEECTTCBSCCH--------
T ss_pred cCCCCCEEECCCCccCHHHHHH-H-HHhCCCcccccccccC-CCcHHHHHH--hcCCCCcCccccccccccc--------
Confidence 3568999999988522221111 1 3568999999999995 333322223 3689999999999876554
Q ss_pred hhcchhhHhhhccccceeeecCCCCCCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCc-ccc--ccCC
Q 004225 143 TILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDH-LVN--LVPP 219 (767)
Q Consensus 143 ~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~-~~~--~~~~ 219 (767)
..+.....++++|+.|.+++|....... +.. ......++|+.|++.+|.. +.. +...
T Consensus 111 --~~l~~l~~~~~~L~~L~ls~c~~~~~~~---------------~~~---~~~~~~~~L~~L~l~~~~~~i~~~~l~~l 170 (284)
T d2astb2 111 --FALQTLLSSCSRLDELNLSWCFDFTEKH---------------VQV---AVAHVSETITQLNLSGYRKNLQKSDLSTL 170 (284)
T ss_dssp --HHHHHHHHHCTTCCEEECCCCTTCCHHH---------------HHH---HHHHSCTTCCEEECCSCGGGSCHHHHHHH
T ss_pred --cccchhhHHHHhcccccccccccccccc---------------chh---hhcccccccchhhhccccccccccccccc
Confidence 2333446778999999999886432210 111 1122357899999998743 322 1111
Q ss_pred CCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhccccccccccccccccccceEeecCCCCccccc
Q 004225 220 STSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVITFRELKELKLVDLERLTSFC 299 (767)
Q Consensus 220 ~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~ 299 (767)
...+|+|++|++++|..+++..... ...+++|++|++++|+.+.+....... .+|+|+.|++++|-.-..+.
T Consensus 171 ~~~~~~L~~L~L~~~~~itd~~~~~-l~~~~~L~~L~L~~C~~i~~~~l~~L~-------~~~~L~~L~l~~~~~d~~l~ 242 (284)
T d2astb2 171 VRRCPNLVHLDLSDSVMLKNDCFQE-FFQLNYLQHLSLSRCYDIIPETLLELG-------EIPTLKTLQVFGIVPDGTLQ 242 (284)
T ss_dssp HHHCTTCSEEECTTCTTCCGGGGGG-GGGCTTCCEEECTTCTTCCGGGGGGGG-------GCTTCCEEECTTSSCTTCHH
T ss_pred ccccccccccccccccCCCchhhhh-hcccCcCCEEECCCCCCCChHHHHHHh-------cCCCCCEEeeeCCCCHHHHH
Confidence 3467999999999999998765444 356899999999999988654332211 17999999999983222221
Q ss_pred CCCccccCCccceEeecCCCCcccc
Q 004225 300 SGNCAFKFPSLERLVVDDCPDMKIF 324 (767)
Q Consensus 300 ~~~~~~~~~~L~~L~i~~c~~l~~~ 324 (767)
.....+|+|+ + +|..++..
T Consensus 243 --~l~~~lp~L~---i-~~~~ls~~ 261 (284)
T d2astb2 243 --LLKEALPHLQ---I-NCSHFTTI 261 (284)
T ss_dssp --HHHHHSTTSE---E-SCCCSCCT
T ss_pred --HHHHhCcccc---c-cCccCCCC
Confidence 1223566665 3 57666643
No 20
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.19 E-value=5.6e-11 Score=119.13 Aligned_cols=66 Identities=14% Similarity=0.220 Sum_probs=31.5
Q ss_pred cccCCCCccceeecccccccc-cccCCCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcc
Q 004225 59 KNIVMFPQLQYLKMSDLEKFT-SFCTGDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKH 130 (767)
Q Consensus 59 ~~~~~~~~L~~L~l~~~~~l~-~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~ 130 (767)
..+..+++|++|+++++.++. .+|.. +..+++|++|+++++.... ..+..+ ..+++|+.+++..+.
T Consensus 70 ~~l~~L~~L~~L~Ls~~N~l~g~iP~~---i~~L~~L~~L~Ls~N~l~~-~~~~~~--~~~~~L~~l~l~~N~ 136 (313)
T d1ogqa_ 70 SSLANLPYLNFLYIGGINNLVGPIPPA---IAKLTQLHYLYITHTNVSG-AIPDFL--SQIKTLVTLDFSYNA 136 (313)
T ss_dssp GGGGGCTTCSEEEEEEETTEESCCCGG---GGGCTTCSEEEEEEECCEE-ECCGGG--GGCTTCCEEECCSSE
T ss_pred hHHhcCccccccccccccccccccccc---cccccccchhhhccccccc-cccccc--cchhhhccccccccc
Confidence 445555666666665554444 23322 3455666666665553222 111112 245555666555544
No 21
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.17 E-value=6.8e-10 Score=113.23 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=57.3
Q ss_pred CccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCC
Q 004225 7 NLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDL 86 (767)
Q Consensus 7 ~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 86 (767)
+|++|+|+++. ++.+|+ ..++|++|+++++ ++++++ . .+.+|++|++.++ +++.++.
T Consensus 39 ~l~~LdLs~~~-L~~lp~-----~~~~L~~L~Ls~N-~l~~lp---------~---~~~~L~~L~l~~n-~l~~l~~--- 95 (353)
T d1jl5a_ 39 QAHELELNNLG-LSSLPE-----LPPHLESLVASCN-SLTELP---------E---LPQSLKSLLVDNN-NLKALSD--- 95 (353)
T ss_dssp TCSEEECTTSC-CSCCCS-----CCTTCSEEECCSS-CCSSCC---------C---CCTTCCEEECCSS-CCSCCCS---
T ss_pred CCCEEEeCCCC-CCCCCC-----CCCCCCEEECCCC-CCcccc---------c---chhhhhhhhhhhc-ccchhhh---
Confidence 67888888864 677642 3567888888765 465541 1 1457888887764 2333331
Q ss_pred cccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCccc
Q 004225 87 DILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHV 131 (767)
Q Consensus 87 ~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~ 131 (767)
-.++|++|+++++. +.... . + ..+++|++|++.++..
T Consensus 96 ---lp~~L~~L~L~~n~-l~~lp-~-~--~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 96 ---LPPLLEYLGVSNNQ-LEKLP-E-L--QNSSFLKIIDVDNNSL 132 (353)
T ss_dssp ---CCTTCCEEECCSSC-CSSCC-C-C--TTCTTCCEEECCSSCC
T ss_pred ---hccccccccccccc-ccccc-c-h--hhhccceeeccccccc
Confidence 12468888887764 33321 1 1 3577888888776653
No 22
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.13 E-value=2.8e-09 Score=106.01 Aligned_cols=248 Identities=12% Similarity=0.145 Sum_probs=120.5
Q ss_pred CCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCC
Q 004225 6 QNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGD 85 (767)
Q Consensus 6 ~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 85 (767)
+++++|+|+++ .++.+++ ..+.++++|++|+++++. +..+. +..+..+++|++|++.++ +++.++.
T Consensus 31 ~~l~~L~Ls~N-~i~~l~~-~~f~~l~~L~~L~l~~n~-~~~i~--------~~~f~~l~~L~~L~l~~n-~l~~l~~-- 96 (305)
T d1xkua_ 31 PDTALLDLQNN-KITEIKD-GDFKNLKNLHTLILINNK-ISKIS--------PGAFAPLVKLERLYLSKN-QLKELPE-- 96 (305)
T ss_dssp TTCCEEECCSS-CCCCBCT-TTTTTCTTCCEEECCSSC-CCCBC--------TTTTTTCTTCCEEECCSS-CCSBCCS--
T ss_pred CCCCEEECcCC-cCCCcCh-hHhhcccccccccccccc-ccccc--------hhhhhCCCccCEecccCC-ccCcCcc--
Confidence 56777777776 4666643 234567777777777765 22221 123455677777777765 3555543
Q ss_pred CcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecCC
Q 004225 86 LDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGGY 165 (767)
Q Consensus 86 ~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~ 165 (767)
..++.+++|...++.. .......+ .....+..+....+..... ......+..+++|+.+.+.++
T Consensus 97 ---~~~~~l~~L~~~~n~l-~~l~~~~~--~~~~~~~~l~~~~n~~~~~----------~~~~~~~~~l~~L~~l~l~~n 160 (305)
T d1xkua_ 97 ---KMPKTLQELRVHENEI-TKVRKSVF--NGLNQMIVVELGTNPLKSS----------GIENGAFQGMKKLSYIRIADT 160 (305)
T ss_dssp ---SCCTTCCEEECCSSCC-CBBCHHHH--TTCTTCCEEECCSSCCCGG----------GBCTTGGGGCTTCCEEECCSS
T ss_pred ---chhhhhhhhhccccch-hhhhhhhh--hcccccccccccccccccc----------CCCccccccccccCccccccC
Confidence 2345677776665432 11111111 1234444454443321110 001112334444444444433
Q ss_pred CCCCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchh
Q 004225 166 SASLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLI 245 (767)
Q Consensus 166 ~~~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~ 245 (767)
. +..+. ...+++|++|++.++............+++++.|.++++ .+..+.+..
T Consensus 161 ~---------------------l~~l~---~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n-~l~~~~~~~- 214 (305)
T d1xkua_ 161 N---------------------ITTIP---QGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN-SISAVDNGS- 214 (305)
T ss_dssp C---------------------CCSCC---SSCCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSS-CCCEECTTT-
T ss_pred C---------------------ccccC---cccCCccCEEECCCCcCCCCChhHhhccccccccccccc-ccccccccc-
Confidence 2 11110 112356666666655443332333445566666666655 334443322
Q ss_pred hhccccCcEEeEccccccchhccccccccccccccccccceEeecCCCCcccccCCC-----ccccCCccceEeecCCC
Q 004225 246 AKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVITFRELKELKLVDLERLTSFCSGN-----CAFKFPSLERLVVDDCP 319 (767)
Q Consensus 246 ~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~-----~~~~~~~L~~L~i~~c~ 319 (767)
+.++++|++|++++|. ++.++..... +++|+.|+++++ ++++++... .....++|+.|++.+.|
T Consensus 215 ~~~l~~L~~L~L~~N~-L~~lp~~l~~--------l~~L~~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 215 LANTPHLRELHLNNNK-LVKVPGGLAD--------HKYIQVVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp GGGSTTCCEEECCSSC-CSSCCTTTTT--------CSSCCEEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ccccccceeeeccccc-cccccccccc--------ccCCCEEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 3456666666666653 5555433322 566666666664 455554321 01234566666666654
No 23
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=5.6e-10 Score=108.52 Aligned_cols=194 Identities=15% Similarity=0.150 Sum_probs=116.2
Q ss_pred CccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCC
Q 004225 7 NLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDL 86 (767)
Q Consensus 7 ~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 86 (767)
.+.+.+.++ .+++.+|+ .+ .++|++|+++++. +.++.. ..+..+++|++|+++++ +++.++.
T Consensus 11 ~~~~v~C~~-~~L~~iP~-~l---p~~l~~L~Ls~N~-i~~l~~--------~~f~~l~~L~~L~L~~N-~l~~l~~--- 72 (266)
T d1p9ag_ 11 SHLEVNCDK-RNLTALPP-DL---PKDTTILHLSENL-LYTFSL--------ATLMPYTRLTQLNLDRA-ELTKLQV--- 72 (266)
T ss_dssp TCCEEECTT-SCCSSCCS-CC---CTTCCEEECTTSC-CSEEEG--------GGGTTCTTCCEEECTTS-CCCEEEC---
T ss_pred CCeEEEccC-CCCCeeCc-Cc---CcCCCEEECcCCc-CCCcCH--------HHhhccccccccccccc-ccccccc---
Confidence 344444433 24666642 21 1468999998874 665521 23456888999999887 5666654
Q ss_pred cccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecCCC
Q 004225 87 DILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGGYS 166 (767)
Q Consensus 87 ~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 166 (767)
...+++|++|+++++. +.... ..+ ..+++|+.|+++++....-. ...+..+.+++.|.+.++.
T Consensus 73 -~~~l~~L~~L~Ls~N~-l~~~~-~~~--~~l~~L~~L~l~~~~~~~~~------------~~~~~~l~~l~~L~l~~n~ 135 (266)
T d1p9ag_ 73 -DGTLPVLGTLDLSHNQ-LQSLP-LLG--QTLPALTVLDVSFNRLTSLP------------LGALRGLGELQELYLKGNE 135 (266)
T ss_dssp -CSCCTTCCEEECCSSC-CSSCC-CCT--TTCTTCCEEECCSSCCCCCC------------SSTTTTCTTCCEEECTTSC
T ss_pred -cccccccccccccccc-ccccc-ccc--ccccccccccccccccceee------------ccccccccccccccccccc
Confidence 2457899999998875 33222 222 36788999998877542210 1123455667777766654
Q ss_pred CCCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCccccccCC-CCcCCCCCEEEeccCccchhhcCchh
Q 004225 167 ASLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDHLVNLVPP-STSFQNLTNMVVSRCNNLKIVLTSLI 245 (767)
Q Consensus 167 ~~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~-~~~~~~L~~L~l~~c~~l~~~~~~~~ 245 (767)
++.+.......+++|++|+++++. +..+.+. ...+++|++|+|+++. ++.++...
T Consensus 136 ---------------------l~~l~~~~~~~l~~l~~l~l~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-L~~lp~~~- 191 (266)
T d1p9ag_ 136 ---------------------LKTLPPGLLTPTPKLEKLSLANNN-LTELPAGLLNGLENLDTLLLQENS-LYTIPKGF- 191 (266)
T ss_dssp ---------------------CCCCCTTTTTTCTTCCEEECTTSC-CSCCCTTTTTTCTTCCEEECCSSC-CCCCCTTT-
T ss_pred ---------------------cceeccccccccccchhccccccc-ccccCccccccccccceeecccCC-CcccChhH-
Confidence 222211222335778888887654 3333332 4567888888888764 66665432
Q ss_pred hhccccCcEEeEccc
Q 004225 246 AKTLVRLRYMKIKSC 260 (767)
Q Consensus 246 ~~~l~~L~~L~i~~c 260 (767)
..+++|+.|++++.
T Consensus 192 -~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 192 -FGSHLLPFAFLHGN 205 (266)
T ss_dssp -TTTCCCSEEECCSC
T ss_pred -CCCCCCCEEEecCC
Confidence 35778888888753
No 24
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.11 E-value=5.5e-10 Score=129.20 Aligned_cols=364 Identities=12% Similarity=0.092 Sum_probs=224.3
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHh--CCChHHHHHhhCCC
Q 004225 373 SGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVID--GGAVPIFVKLLSSP 450 (767)
Q Consensus 373 ~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~--~~~l~~L~~lL~~~ 450 (767)
...+..|+..|..++....+.++ .-+++.+.+.+.+++ +..|..|+.+++.++....+.+.. ..+++.++..+.++
T Consensus 371 ~~~r~~a~~~L~~l~~~~~~~il-~~~l~~l~~~l~s~~-~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~ 448 (888)
T d1qbkb_ 371 WNLRKCSAAALDVLANVYRDELL-PHILPLLKELLFHHE-WVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDK 448 (888)
T ss_dssp CSSHHHHHHHSTTTTTTCCSSSH-HHHHHHHHHTTTSSS-HHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHhhHhhhhHHHHH-HHHHHHHHHhhccch-hHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCC
Confidence 45677777777777611111111 113566667777887 999999999999988711111111 13578888899999
Q ss_pred CHHHHHHHHHHHHHHhcCCch-hHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHH
Q 004225 451 SDDVREKAVWALGNIARSSPR-DRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQ 529 (767)
Q Consensus 451 ~~~v~~~a~~~L~nl~~~~~~-~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ 529 (767)
++.+|..|+|+++.++..... ..+.. -...++.++..+ .++++.++..|++++.+++......-......+++.+..
T Consensus 449 ~~~Vr~~a~~~l~~~~~~~~~~~~~~~-~~~~l~~ll~~l-~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~ 526 (888)
T d1qbkb_ 449 KALVRSITCWTLSRYAHWVVSQPPDTY-LKPLMTELLKRI-LDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVF 526 (888)
T ss_dssp CHHHHHHHHHHHHHTHHHHHSSCHHHH-TTTHHHHHHHHH-SSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhhhhhhhh-hhhhHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHH
Confidence 999999999999998842211 11111 234778888888 788899999999999999866533334455778888888
Q ss_pred HhcCCCHHHHHHHHHHHHhhccCChhH--HHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcc-eeeh--
Q 004225 530 LVHSNDNDVLRYACEALSCLSDGTNDK--IQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFL-TQCT-- 604 (767)
Q Consensus 530 ll~~~~~~v~~~a~~~L~~l~~~~~~~--~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~-~~~l-- 604 (767)
.+...+...+..+..++..++...... ...+.+ .+++.+................++.+++.++...... ..+.
T Consensus 527 ~l~~~~~~~~~~~~~al~~l~~~~~~~~~~~~~~~-~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~ 605 (888)
T d1qbkb_ 527 AFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQ-MLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEP 605 (888)
T ss_dssp HTTTCCHHHHHHHHHHHHHHHHHHGGGGCSHHHHH-HHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHH
T ss_pred HHhhhhHHHHHHHHHHHHHHHHhhhccccchHHHH-HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 888877777776666666665321110 011111 2445555544432221133445555555554222111 0000
Q ss_pred -------------------------------hhhHHHHHHHhhhccCCHHHHH-HHHHcCCHHHHHHHHhcCCchhHHHH
Q 004225 605 -------------------------------GIAKEACRTISNITAGNREQIQ-VVIDAGVIGPLVDLLQNAEFFTKKEA 652 (767)
Q Consensus 605 -------------------------------~v~~~a~~~l~nl~~~~~~~~~-~~~~~~~i~~L~~ll~~~~~~v~~~a 652 (767)
++...+..+++.++..-..... .+....+++.+...+++.+..+|..|
T Consensus 606 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~~vr~~a 685 (888)
T d1qbkb_ 606 VYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSS 685 (888)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCChHHHHHH
Confidence 2233344444444431111112 22334567888888999999999999
Q ss_pred HHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchH
Q 004225 653 ARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGF 732 (767)
Q Consensus 653 ~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 732 (767)
..+++.++.... ......++ .+++.+..-+++....++..|+|+++.++..... ...+|...+ +
T Consensus 686 ~~llgdl~~~~~-~~~~~~l~-~~~~~l~~~L~~~~~~v~~~a~~~ig~ia~~~~~---------~~~py~~~i-----l 749 (888)
T d1qbkb_ 686 FALLGDLTKACF-QHVKPCIA-DFMPILGTNLNPEFISVCNNATWAIGEISIQMGI---------EMQPYIPMV-----L 749 (888)
T ss_dssp HHHHHHHHHHCG-GGTGGGHH-HHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHTGG---------GGGGGSHHH-----H
T ss_pred HHHHHHHHHhhh-HHHHHHHH-HHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH---------HhhhhHHHH-----H
Confidence 999998876532 22222122 2677788888888889999999999999886543 223344444 6
Q ss_pred HHHHHHhcCCC--hHHHHHHHHHHHHh
Q 004225 733 KKIEDLKRHDS--NGICEKAVKILEIY 757 (767)
Q Consensus 733 ~~l~~l~~~~~--~~v~~~a~~~l~~~ 757 (767)
+.|..++++++ ..+++.+..++.++
T Consensus 750 ~~L~~il~~~~~~~~v~~n~~~~lgrl 776 (888)
T d1qbkb_ 750 HQLVEIINRPNTPKTLLENTAITIGRL 776 (888)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 67777776643 55888888787755
No 25
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.10 E-value=3.7e-09 Score=103.39 Aligned_cols=256 Identities=17% Similarity=0.168 Sum_probs=154.5
Q ss_pred cCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHH
Q 004225 397 SGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLV 476 (767)
Q Consensus 397 ~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~ 476 (767)
....+.|+++|++++ +.+|..|+.+|..+.. ..+++.++++++++++.+|..|+.+|+.+....... +.
T Consensus 18 ~~~~~~L~~~L~d~~-~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~-~~- 86 (276)
T d1oyza_ 18 KLNDDELFRLLDDHN-SLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCE-DN- 86 (276)
T ss_dssp TSCHHHHHHHTTCSS-HHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTTH-HH-
T ss_pred cCCHHHHHHHhcCCC-HHHHHHHHHHHHhhCC--------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhccccccc-cc-
Confidence 345667777888777 7888888887776643 124677788888888888888888888776432211 11
Q ss_pred HhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhH
Q 004225 477 LSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDK 556 (767)
Q Consensus 477 ~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~ 556 (767)
.++.+...+..++++.++..++.++++++... .......++.+...+.+.+..++..++.++..+..
T Consensus 87 ----~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~----~~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~~~~----- 153 (276)
T d1oyza_ 87 ----VFNILNNMALNDKSACVRATAIESTAQRCKKN----PIYSPKIVEQSQITAFDKSTNVRRATAFAISVIND----- 153 (276)
T ss_dssp ----HHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHC----GGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-------
T ss_pred ----hHHHHHHHHhcCCChhHHHHHHHHHHHHcccc----chhhHHHHHHHHHHhcCcchHHHHHHHHHHhhcch-----
Confidence 23344444446777888888888887776543 12234566677777777777777777777765432
Q ss_pred HHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcCCHHH
Q 004225 557 IQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAGVIGP 636 (767)
Q Consensus 557 ~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~ 636 (767)
...++.+..++.+.+. .++..+..+++.+...... ..+.
T Consensus 154 ------~~~~~~l~~l~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~---------~~~~ 192 (276)
T d1oyza_ 154 ------KATIPLLINLLKDPNG--------------------------DVRNWAAFAININKYDNSD---------IRDC 192 (276)
T ss_dssp -------CCHHHHHHHHTCSSH--------------------------HHHHHHHHHHHHHTCCCHH---------HHHH
T ss_pred ------HHHHHHHHHhcccccc--------------------------hhhhhHHHHHHhhhccccc---------cchh
Confidence 2345666667766665 4445555555544444332 2334
Q ss_pred HHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCcc
Q 004225 637 LVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTAN 716 (767)
Q Consensus 637 L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~ 716 (767)
+...+...+..++..+.+++..+.. ..+++.|++.+++ ++++..++++|..+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~al~~~~~------------~~~~~~L~~~l~d--~~vr~~a~~aL~~ig~------------ 246 (276)
T d1oyza_ 193 FVEMLQDKNEEVRIEAIIGLSYRKD------------KRVLSVLCDELKK--NTVYDDIIEAAGELGD------------ 246 (276)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHTTC------------GGGHHHHHHHHTS--SSCCHHHHHHHHHHCC------------
T ss_pred hhhhhhhhhhhhhhhhccccchhhh------------hhhHHHHHHHhCC--hHHHHHHHHHHHHcCC------------
Confidence 5556666777777777777765432 1245556666653 3466777777765421
Q ss_pred ccccHHHHHHHhhchHHHHHHHhcC-CChHHHHHHHHHHH
Q 004225 717 RYFNHYARLVEAAEGFKKIEDLKRH-DSNGICEKAVKILE 755 (767)
Q Consensus 717 ~~~~~~~~~l~~~g~~~~l~~l~~~-~~~~v~~~a~~~l~ 755 (767)
.++++.|.+++.+ ++.+|+..|.+.|.
T Consensus 247 ------------~~~~~~L~~~l~~~~d~~vr~~A~~~L~ 274 (276)
T d1oyza_ 247 ------------KTLLPVLDTMLYKFDDNEIITSAIDKLK 274 (276)
T ss_dssp ------------GGGHHHHHHHHTTSSCCHHHHHHHHHHT
T ss_pred ------------HHHHHHHHHHHccCCCHHHHHHHHHHHc
Confidence 1234445544433 56677777777664
No 26
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=99.08 E-value=8.2e-09 Score=100.82 Aligned_cols=251 Identities=17% Similarity=0.114 Sum_probs=187.6
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh--hhhHHHHhC
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS--ENTNVVIDG 437 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~--~~~~~~~~~ 437 (767)
..+.+++.|.++++.++..|+..|..+.. ...++.+++++++++ +.++..|+.+|..+.. .....+
T Consensus 20 ~~~~L~~~L~d~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~-~~vr~~a~~aL~~l~~~~~~~~~~--- 87 (276)
T d1oyza_ 20 NDDELFRLLDDHNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKN-YIRRDIGAFILGQIKICKKCEDNV--- 87 (276)
T ss_dssp CHHHHHHHTTCSSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSS-HHHHHHHHHHHHHSCCCTTTHHHH---
T ss_pred CHHHHHHHhcCCCHHHHHHHHHHHHhhCC--------HhHHHHHHHHHcCCC-HHHHHHHHHHHHHhccccccccch---
Confidence 67789999999999999999999988653 235799999999998 9999999999998865 221211
Q ss_pred CChHHHH-HhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCC
Q 004225 438 GAVPIFV-KLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPP 516 (767)
Q Consensus 438 ~~l~~L~-~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~ 516 (767)
++.+. .+++++++.++..|+.+|+++....+..... .++.+...+ .+.++.++..++.+++.+...
T Consensus 88 --~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~~-----~~~~l~~~~-~d~~~~vr~~a~~~l~~~~~~----- 154 (276)
T d1oyza_ 88 --FNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPK-----IVEQSQITA-FDKSTNVRRATAFAISVINDK----- 154 (276)
T ss_dssp --HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCGGGHHH-----HHHHHHHHT-TCSCHHHHHHHHHHHHTC--------
T ss_pred --HHHHHHHHhcCCChhHHHHHHHHHHHHccccchhhHH-----HHHHHHHHh-cCcchHHHHHHHHHHhhcchH-----
Confidence 23333 3567899999999999999998665443332 456777777 788899999999998876533
Q ss_pred ccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhcc
Q 004225 517 FDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKG 596 (767)
Q Consensus 517 ~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~ 596 (767)
..++.+..++...+..++..+..++..+...... ..+.+...+.+.+.
T Consensus 155 -----~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~------------------ 202 (276)
T d1oyza_ 155 -----ATIPLLINLLKDPNGDVRNWAAFAININKYDNSD---------IRDCFVEMLQDKNE------------------ 202 (276)
T ss_dssp -----CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCCCHH---------HHHHHHHHTTCSCH------------------
T ss_pred -----HHHHHHHHhcccccchhhhhHHHHHHhhhccccc---------cchhhhhhhhhhhh------------------
Confidence 4678888899999999999999888887766532 33446667777776
Q ss_pred CCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCC
Q 004225 597 DGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGC 676 (767)
Q Consensus 597 ~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~ 676 (767)
.++..+..+++.+.. ..+++.|++.+++ +.+|..|+++|+.+.. + +.
T Consensus 203 --------~~~~~~~~al~~~~~-----------~~~~~~L~~~l~d--~~vr~~a~~aL~~ig~---~---------~~ 249 (276)
T d1oyza_ 203 --------EVRIEAIIGLSYRKD-----------KRVLSVLCDELKK--NTVYDDIIEAAGELGD---K---------TL 249 (276)
T ss_dssp --------HHHHHHHHHHHHTTC-----------GGGHHHHHHHHTS--SSCCHHHHHHHHHHCC---G---------GG
T ss_pred --------hhhhhhccccchhhh-----------hhhHHHHHHHhCC--hHHHHHHHHHHHHcCC---H---------HH
Confidence 566666666654422 2467888888874 5689999999998753 2 36
Q ss_pred hHHHHhhhcC-CCHHHHHHHHHHHH
Q 004225 677 IKPLCDLLLY-ADPEIVTICLKGLE 700 (767)
Q Consensus 677 i~~L~~ll~~-~~~~v~~~al~aL~ 700 (767)
++.|..++.+ ++.+++..|+.+|.
T Consensus 250 ~~~L~~~l~~~~d~~vr~~A~~~L~ 274 (276)
T d1oyza_ 250 LPVLDTMLYKFDDNEIITSAIDKLK 274 (276)
T ss_dssp HHHHHHHHTTSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHc
Confidence 7777777765 57899999998874
No 27
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.08 E-value=6.4e-10 Score=111.20 Aligned_cols=113 Identities=19% Similarity=0.157 Sum_probs=78.0
Q ss_pred CccEEeeecCCCcccc-ccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCC
Q 004225 7 NLTRLTLSCCMNLRCL-FSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGD 85 (767)
Q Consensus 7 ~L~~L~l~~c~~l~~l-~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 85 (767)
+++.|+|.++. +... +.+..+..+++|++|+++++.++.. ..|..+..+++|++|+++++. +...+...
T Consensus 51 ~v~~L~L~~~~-l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g--------~iP~~i~~L~~L~~L~Ls~N~-l~~~~~~~ 120 (313)
T d1ogqa_ 51 RVNNLDLSGLN-LPKPYPIPSSLANLPYLNFLYIGGINNLVG--------PIPPAIAKLTQLHYLYITHTN-VSGAIPDF 120 (313)
T ss_dssp CEEEEEEECCC-CSSCEECCGGGGGCTTCSEEEEEEETTEES--------CCCGGGGGCTTCSEEEEEEEC-CEEECCGG
T ss_pred EEEEEECCCCC-CCCCCCCChHHhcCcccccccccccccccc--------ccccccccccccchhhhcccc-cccccccc
Confidence 68999999974 3321 1123346899999999998765542 125667789999999999864 44433322
Q ss_pred CcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccc
Q 004225 86 LDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTN 134 (767)
Q Consensus 86 ~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 134 (767)
...+++|+.+++.++....... ..+ ..+++|+.++++++.....
T Consensus 121 --~~~~~~L~~l~l~~N~~~~~~p-~~l--~~l~~L~~l~l~~n~l~~~ 164 (313)
T d1ogqa_ 121 --LSQIKTLVTLDFSYNALSGTLP-PSI--SSLPNLVGITFDGNRISGA 164 (313)
T ss_dssp --GGGCTTCCEEECCSSEEESCCC-GGG--GGCTTCCEEECCSSCCEEE
T ss_pred --ccchhhhcccccccccccccCc-hhh--ccCcccceeeccccccccc
Confidence 4568899999999876554322 223 3789999999998875433
No 28
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.06 E-value=1.7e-09 Score=105.09 Aligned_cols=174 Identities=17% Similarity=0.167 Sum_probs=93.0
Q ss_pred CCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcch
Q 004225 64 FPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERT 143 (767)
Q Consensus 64 ~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 143 (767)
.++|++|+|++. +++.++... ...+++|++|+++++. ++.... + ..+++|++|++++|.....
T Consensus 30 p~~l~~L~Ls~N-~i~~l~~~~--f~~l~~L~~L~L~~N~-l~~l~~--~--~~l~~L~~L~Ls~N~l~~~--------- 92 (266)
T d1p9ag_ 30 PKDTTILHLSEN-LLYTFSLAT--LMPYTRLTQLNLDRAE-LTKLQV--D--GTLPVLGTLDLSHNQLQSL--------- 92 (266)
T ss_dssp CTTCCEEECTTS-CCSEEEGGG--GTTCTTCCEEECTTSC-CCEEEC--C--SCCTTCCEEECCSSCCSSC---------
T ss_pred CcCCCEEECcCC-cCCCcCHHH--hhcccccccccccccc-cccccc--c--ccccccccccccccccccc---------
Confidence 358999999985 466666544 4578999999999984 444321 2 3689999999998753211
Q ss_pred hcchhhHhhhccccceeeecCCCCCCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCccccccCC-CCc
Q 004225 144 ILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDHLVNLVPP-STS 222 (767)
Q Consensus 144 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~-~~~ 222 (767)
...+..+++|+.|.++++.. ..+.......+.++++|.+.++. +..+.+. ...
T Consensus 93 ----~~~~~~l~~L~~L~l~~~~~---------------------~~~~~~~~~~l~~l~~L~l~~n~-l~~l~~~~~~~ 146 (266)
T d1p9ag_ 93 ----PLLGQTLPALTVLDVSFNRL---------------------TSLPLGALRGLGELQELYLKGNE-LKTLPPGLLTP 146 (266)
T ss_dssp ----CCCTTTCTTCCEEECCSSCC---------------------CCCCSSTTTTCTTCCEEECTTSC-CCCCCTTTTTT
T ss_pred ----cccccccccccccccccccc---------------------ceeeccccccccccccccccccc-cceeccccccc
Confidence 11133444555555544331 11111112234556666665432 2222222 234
Q ss_pred CCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhccccccccccccccccccceEeecC
Q 004225 223 FQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVITFRELKELKLVD 291 (767)
Q Consensus 223 ~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 291 (767)
+++|+.|+++++ +++.+++.. +..+++|++|+++++. ++.++.+... +++|+.|.+++
T Consensus 147 l~~l~~l~l~~N-~l~~~~~~~-~~~l~~L~~L~Ls~N~-L~~lp~~~~~--------~~~L~~L~L~~ 204 (266)
T d1p9ag_ 147 TPKLEKLSLANN-NLTELPAGL-LNGLENLDTLLLQENS-LYTIPKGFFG--------SHLLPFAFLHG 204 (266)
T ss_dssp CTTCCEEECTTS-CCSCCCTTT-TTTCTTCCEEECCSSC-CCCCCTTTTT--------TCCCSEEECCS
T ss_pred cccchhcccccc-cccccCccc-cccccccceeecccCC-CcccChhHCC--------CCCCCEEEecC
Confidence 555666666554 333333222 3345556666655543 4455443332 45555555554
No 29
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.06 E-value=8.6e-10 Score=104.37 Aligned_cols=57 Identities=14% Similarity=0.224 Sum_probs=44.2
Q ss_pred cccccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEcc
Q 004225 197 SVTNNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKS 259 (767)
Q Consensus 197 ~~~~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~ 259 (767)
..+++|++|+++++ .++++ +....+++|++|+|++| +++++++ ++++++|+.|++++
T Consensus 170 ~~l~~L~~L~Ls~n-~l~~l-~~l~~l~~L~~L~Ls~N-~lt~i~~---l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 170 ANLSKLTTLKADDN-KISDI-SPLASLPNLIEVHLKNN-QISDVSP---LANTSNLFIVTLTN 226 (227)
T ss_dssp TTCTTCCEEECCSS-CCCCC-GGGGGCTTCCEEECTTS-CCCBCGG---GTTCTTCCEEEEEE
T ss_pred cccccceecccCCC-ccCCC-hhhcCCCCCCEEECcCC-cCCCCcc---cccCCCCCEEEeeC
Confidence 44689999999887 45554 34677899999999998 5777754 45799999999864
No 30
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.05 E-value=4.4e-09 Score=114.54 Aligned_cols=141 Identities=17% Similarity=0.135 Sum_probs=110.5
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh-hhhHHHHhCC
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS-ENTNVVIDGG 438 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~-~~~~~~~~~~ 438 (767)
+.+..++++.+++...+.-+.-++..++.++.+...- +++.+.+-+++++ +.++..|++++.++.. +....+
T Consensus 67 ~~~~vi~l~ss~~~~~Kr~gYL~l~~~~~~~~el~~L--~iNtl~KDL~s~n-~~ir~lALr~L~~i~~~~i~~~l---- 139 (584)
T d2vgla_ 67 GHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRL--INNAIKNDLASRN-PTFMGLALHCIANVGSREMAEAF---- 139 (584)
T ss_dssp CHHHHHHGGGCSCHHHHHHHHHHHHHSCCCCHHHHHH--HHHHHHHHHHSCC-HHHHHHHHHHHHHHCCHHHHHHH----
T ss_pred hHHHHHHHhCCCCHHHHHHHHHHHHHHcCCCchHHHH--HHHHHHHHcCCCC-HHHHHHHHHHHHcCCCHHHHHHH----
Confidence 4678899999999999999999988888554444322 4678888888988 9999999999999987 444433
Q ss_pred ChHHHHHhhC--CCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCC
Q 004225 439 AVPIFVKLLS--SPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK 512 (767)
Q Consensus 439 ~l~~L~~lL~--~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~ 512 (767)
.+.+.+++. +.++.+|..|+.++..+....++. ....+.++.+.+++ .+.++.++.+|++++..++...
T Consensus 140 -~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd~---~~~~~~~~~L~~lL-~D~d~~V~~aAl~ll~eI~~~~ 210 (584)
T d2vgla_ 140 -AGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDL---VPMGDWTSRVVHLL-NDQHLGVVTAATSLITTLAQKN 210 (584)
T ss_dssp -TTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGG---CCCCSCHHHHHHHT-TCSCHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHhhccCCCcHHHHHHHHHHHHHHHHhChhh---hhhhhHHHHHHHHh-cCCChhHHHHHHHHHHHHHHhC
Confidence 344555443 567899999999999999766553 23456889999999 7899999999999999987654
No 31
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.05 E-value=9.2e-10 Score=104.16 Aligned_cols=97 Identities=15% Similarity=0.205 Sum_probs=47.8
Q ss_pred ccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhccccccccccccc
Q 004225 200 NNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVI 279 (767)
Q Consensus 200 ~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~ 279 (767)
+.++.+.+.++.... .......++|++|.+.+|.. .+... ++++++|++|++++| .+++++. ...
T Consensus 129 ~~~~~l~~~~~~~~~--~~~~~~~~~L~~L~l~~n~~-~~~~~---l~~l~~L~~L~Ls~n-~l~~l~~-l~~------- 193 (227)
T d1h6ua2 129 SNLQVLYLDLNQITN--ISPLAGLTNLQYLSIGNAQV-SDLTP---LANLSKLTTLKADDN-KISDISP-LAS------- 193 (227)
T ss_dssp TTCCEEECCSSCCCC--CGGGGGCTTCCEEECCSSCC-CCCGG---GTTCTTCCEEECCSS-CCCCCGG-GGG-------
T ss_pred cchhhhhchhhhhch--hhhhcccccccccccccccc-ccchh---hcccccceecccCCC-ccCCChh-hcC-------
Confidence 445555554433221 11234455666666655532 22211 234666666666665 3444432 111
Q ss_pred cccccceEeecCCCCcccccCCCccccCCccceEeec
Q 004225 280 TFRELKELKLVDLERLTSFCSGNCAFKFPSLERLVVD 316 (767)
Q Consensus 280 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~L~~L~i~ 316 (767)
+++|+.|+++++ ++++++. ...+++|++|+++
T Consensus 194 -l~~L~~L~Ls~N-~lt~i~~---l~~l~~L~~L~ls 225 (227)
T d1h6ua2 194 -LPNLIEVHLKNN-QISDVSP---LANTSNLFIVTLT 225 (227)
T ss_dssp -CTTCCEEECTTS-CCCBCGG---GTTCTTCCEEEEE
T ss_pred -CCCCCEEECcCC-cCCCCcc---cccCCCCCEEEee
Confidence 566666666665 4555541 2356666666664
No 32
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03 E-value=2.4e-09 Score=102.50 Aligned_cols=104 Identities=16% Similarity=0.186 Sum_probs=67.9
Q ss_pred cEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcc
Q 004225 9 TRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDI 88 (767)
Q Consensus 9 ~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~ 88 (767)
++++..+. .++.+|+ .. .+++++|+++++. ++.+.. ..+..+++|++|+++++.....++... .
T Consensus 11 ~~i~c~~~-~l~~iP~-~l---~~~l~~L~Ls~n~-i~~l~~--------~~f~~l~~L~~L~ls~n~~~~~i~~~~--f 74 (242)
T d1xwdc1 11 RVFLCQES-KVTEIPS-DL---PRNAIELRFVLTK-LRVIQK--------GAFSGFGDLEKIEISQNDVLEVIEADV--F 74 (242)
T ss_dssp SEEEEESC-SCSSCCS-CS---CSCCSEEEEESCC-CCEECT--------TTTTTCTTCCEEEEESCTTCCEECSSS--E
T ss_pred CEEEEeCC-CCCCcCC-CC---CCCCCEEECcCCc-CCccCh--------hHhhccchhhhhhhccccccceeeccc--c
Confidence 45565553 4666642 21 2468889888774 665521 234567888999888876555444332 3
Q ss_pred cCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcc
Q 004225 89 LEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKH 130 (767)
Q Consensus 89 ~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~ 130 (767)
..+++++++.+..|..+....+..+ ..+++|++|++.++.
T Consensus 75 ~~l~~l~~l~~~~~n~l~~~~~~~~--~~l~~L~~l~l~~~~ 114 (242)
T d1xwdc1 75 SNLPKLHEIRIEKANNLLYINPEAF--QNLPNLQYLLISNTG 114 (242)
T ss_dssp ESCTTCCEEEEECCTTCCEECTTSE--ECCTTCCEEEEESCC
T ss_pred ccccccccccccccccccccccccc--cccccccccccchhh
Confidence 4578888888888877766655545 367888988888764
No 33
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=4.3e-09 Score=103.28 Aligned_cols=201 Identities=14% Similarity=0.157 Sum_probs=102.2
Q ss_pred CCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccccc
Q 004225 32 VQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRTTS 111 (767)
Q Consensus 32 ~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~ 111 (767)
+++++|+++++. ++++. +..+..+++|++|++++. ++..++... ...++.++++.+..+..+....+.
T Consensus 32 ~~~~~L~Ls~N~-i~~i~--------~~~f~~l~~L~~L~ls~n-~l~~i~~~~--~~~~~~~~~l~~~~~~~~~~l~~~ 99 (284)
T d1ozna_ 32 AASQRIFLHGNR-ISHVP--------AASFRACRNLTILWLHSN-VLARIDAAA--FTGLALLEQLDLSDNAQLRSVDPA 99 (284)
T ss_dssp TTCSEEECTTSC-CCEEC--------TTTTTTCTTCCEEECCSS-CCCEECTTT--TTTCTTCCEEECCSCTTCCCCCTT
T ss_pred CCCCEEECcCCc-CCCCC--------HHHhhccccccccccccc-ccccccccc--ccccccccccccccccccccccch
Confidence 356777777763 66552 123455677777777654 344444332 234567777766666666554444
Q ss_pred cccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecCCCCCCCcccccCCceeeeeecccccch
Q 004225 112 IFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLEHI 191 (767)
Q Consensus 112 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~~~ 191 (767)
.+ ..+++|++|++..+...... ...+....+|+.+.+.+... +.+
T Consensus 100 ~~--~~l~~L~~L~l~~n~~~~~~------------~~~~~~~~~L~~l~l~~N~l---------------------~~i 144 (284)
T d1ozna_ 100 TF--HGLGRLHTLHLDRCGLQELG------------PGLFRGLAALQYLYLQDNAL---------------------QAL 144 (284)
T ss_dssp TT--TTCTTCCEEECTTSCCCCCC------------TTTTTTCTTCCEEECCSSCC---------------------CCC
T ss_pred hh--cccccCCEEecCCccccccc------------ccccchhcccchhhhccccc---------------------ccc
Confidence 34 25677777777766531110 01233445566666655432 111
Q ss_pred hhccccccccccEEEecCCCccccccCC-CCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhcccc
Q 004225 192 LIRESSVTNNLVILRVKGCDHLVNLVPP-STSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGD 270 (767)
Q Consensus 192 ~~~~~~~~~~L~~L~i~~~~~~~~~~~~-~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~ 270 (767)
........++|++|++.++. +..+.+. ...+++|+.+.++++. +..+.+.. +.++++|++|+++++. +..++...
T Consensus 145 ~~~~f~~~~~L~~L~l~~N~-l~~l~~~~f~~l~~L~~l~l~~N~-l~~i~~~~-f~~l~~L~~L~l~~N~-i~~~~~~~ 220 (284)
T d1ozna_ 145 PDDTFRDLGNLTHLFLHGNR-ISSVPERAFRGLHSLDRLLLHQNR-VAHVHPHA-FRDLGRLMTLYLFANN-LSALPTEA 220 (284)
T ss_dssp CTTTTTTCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECCSSC-CCEECTTT-TTTCTTCCEEECCSSC-CSCCCHHH
T ss_pred ChhHhccccchhhcccccCc-ccccchhhhccccccchhhhhhcc-ccccChhH-hhhhhhcccccccccc-cccccccc
Confidence 11112234556666666543 3333222 3445666666666554 33333332 3456666666666654 33333221
Q ss_pred -ccccccccccccccceEeecC
Q 004225 271 -DVVAKDEVITFRELKELKLVD 291 (767)
Q Consensus 271 -~~~~~~~~~~~~~L~~L~l~~ 291 (767)
.. +++|+.|++++
T Consensus 221 ~~~--------~~~L~~L~l~~ 234 (284)
T d1ozna_ 221 LAP--------LRALQYLRLND 234 (284)
T ss_dssp HTT--------CTTCCEEECCS
T ss_pred ccc--------ccccCEEEecC
Confidence 12 56666666665
No 34
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=7.4e-09 Score=123.92 Aligned_cols=387 Identities=12% Similarity=0.081 Sum_probs=244.3
Q ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHhc---CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhC
Q 004225 361 LPGMLAGVWSDDSGLQLEATTWFRKLL---LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDG 437 (767)
Q Consensus 361 i~~l~~~l~s~~~~~~~~a~~~L~~l~---~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 437 (767)
+..+++.+.+.|++.|..|+..|.+.. ....+.-....+++.+++.+.+++ +++|..|+.+|..++.......+ .
T Consensus 5 ~~~ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~-~~Vq~~A~k~l~~l~~~~~~~~~-~ 82 (1207)
T d1u6gc_ 5 ISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKN-GEVQNLAVKCLGPLVSKVKEYQV-E 82 (1207)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSS-HHHHHHHHHHHHHHHTTSCHHHH-H
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHHHHhhcccccChHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHhCcHhhH-H
Confidence 667888999999999999999888776 111111123347899999999888 99999999999999882222222 2
Q ss_pred CChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCch------hHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCC
Q 004225 438 GAVPIFVKLLSSPSDDVREKAVWALGNIARSSPR------DRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQG 511 (767)
Q Consensus 438 ~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~------~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~ 511 (767)
.+++.|+..+.+++...+..+..+|..+...-+. ... .+-...++.+...+....+..++..++.++..+...
T Consensus 83 ~l~~~L~~~l~~~~~~~r~~~~~~L~~i~~~l~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~ 161 (1207)
T d1u6gc_ 83 TIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAA-NVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSR 161 (1207)
T ss_dssp HHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHH-HHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCchhhhHHHHHHHHHHHHhcccccccchhHH-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3577888888888888888888888777532211 111 111124455555554667888999999999988766
Q ss_pred CCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhc-CCCCCCcccchHHHHH
Q 004225 512 KPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLL-HPLPFPFGLTPPLWTV 590 (767)
Q Consensus 512 ~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~-~~~~~~~v~~~a~~~L 590 (767)
.+..-......+++.++..+.+++..+|..|+.+++.++...+... -..+++.+++.+. +.+. ..+..++.++
T Consensus 162 ~g~~l~~~~~~il~~l~~~l~~~~~~vR~~A~~~l~~l~~~~~~~~----~~~~~~~ll~~l~~~~~~--~~~~~~~~~l 235 (1207)
T d1u6gc_ 162 QGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIV----FVDLIEHLLSELSKNDSM--STTRTYIQCI 235 (1207)
T ss_dssp TCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC--------CTTHHHHHHHHHHHTCSS--CSCTTHHHHH
T ss_pred hhHhhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHccCCCH--HHHHHHHHHH
Confidence 5433333456788888888999999999999999999986654321 1235566665554 4444 6777788888
Q ss_pred hhhhccCCcc-eeeh----------------hhhHHHHHHHhhhccCCH----HHHHHHHHc------------------
Q 004225 591 RYIVKGDGFL-TQCT----------------GIAKEACRTISNITAGNR----EQIQVVIDA------------------ 631 (767)
Q Consensus 591 ~~l~~~~~~~-~~~l----------------~v~~~a~~~l~nl~~~~~----~~~~~~~~~------------------ 631 (767)
+.++...+.. ..++ +++..++.++..++...+ .....++..
T Consensus 236 ~~l~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~ 315 (1207)
T d1u6gc_ 236 AAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDE 315 (1207)
T ss_dssp HHHHHHSSGGGTTSCTTHHHHHHHHHSSCCTTTHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHTTCCCCC----------
T ss_pred HHHHHHcchhhHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhChhhhhhhHHHHHHHHHHHHhcCcchhhhhHHH
Confidence 8887543321 1111 677777777776655322 111111100
Q ss_pred --------------CCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHH
Q 004225 632 --------------GVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLK 697 (767)
Q Consensus 632 --------------~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~ 697 (767)
...+..........+.+|..|+.+|..++... ++..... -..+++.++..+.+.++.++..+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~~l~~~~-~~~l~~~-~~~~~~~L~~~l~d~~~~vr~~~~~ 393 (1207)
T d1u6gc_ 316 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTR-HEMLPEF-YKTVSPALISRFKEREENVKADVFH 393 (1207)
T ss_dssp --------------------------CTTHHHHHHHHHHHHHHTTC-CTTHHHH-HTTTHHHHHSTTSCSSSHHHHHHHH
T ss_pred HHhhhhhhccchhhhhHHHHHhhhhhhhHHHHHHHHHHHHhHHHHH-HHHHHHH-HHHHHHHHHHHhcCCchHHHHHHHH
Confidence 00111111123345689999999999998753 3333332 3458899999999999999999999
Q ss_pred HHHHHHHhhhhhhccCCc---cccccHHHHHHH--hhchHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 004225 698 GLENILKVGEAEMNTGTA---NRYFNHYARLVE--AAEGFKKIEDLKRHDSNGICEKAVKILEIYW 758 (767)
Q Consensus 698 aL~~l~~~~~~~~~~~~~---~~~~~~~~~~l~--~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~ 758 (767)
++..+............. ..........+. -...++.+.+.+.+.++.++..+..++..+.
T Consensus 394 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~l~~~~~~~r~~~~~~l~~l~ 459 (1207)
T d1u6gc_ 394 AYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELV 459 (1207)
T ss_dssp HHHHHHHHHCCC------------CCCHHHHHHHHTTHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccchhhhhhchHHHHhhcchHHHHHHHhHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 999887643221100000 000000111111 1235667777788899999988888887663
No 35
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=9.7e-10 Score=116.28 Aligned_cols=336 Identities=12% Similarity=0.061 Sum_probs=211.5
Q ss_pred HHHHHhhhcCC--CHHHHHHHHHHHHHhcCCC---hH-----------HHHhcCchHHHHhhccCCCCHHHHHHHHHHHH
Q 004225 361 LPGMLAGVWSD--DSGLQLEATTWFRKLLLPP---SE-----------KVIQSGVVARFVEFLTREDNPQLQLEAARALT 424 (767)
Q Consensus 361 i~~l~~~l~s~--~~~~~~~a~~~L~~l~~~~---~~-----------~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~ 424 (767)
++.+...+.++ +..++..|+..|++..... .. .-....+.+.+++.+.+++ +. +..++.++.
T Consensus 36 ~~~l~~il~~~~~~~~~R~~A~i~lk~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ll~~~~~~~-~~-~~~~~~~~~ 113 (458)
T d1ibrb_ 36 LVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTET-YR-PSSASQCVA 113 (458)
T ss_dssp HHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCC-SS-SCSHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHhhccCchhhhHHhhhhccCCHHHHHHHHHHHHhccCCCc-HH-HHHHHHHHH
Confidence 56666666543 4678888998988877211 10 1123345566777777766 33 344556666
Q ss_pred HHHh-hhhHHHHhCCChHHHHHhhCC--CCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHcc-CCChHHHHH
Q 004225 425 NIAS-ENTNVVIDGGAVPIFVKLLSS--PSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNK-HAKPSMLRN 500 (767)
Q Consensus 425 ~l~~-~~~~~~~~~~~l~~L~~lL~~--~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~-~~~~~~~~~ 500 (767)
.++. +.... ...+.++.++..+.+ .+...+..++.+++.++...............++.++..+.. +.+..++..
T Consensus 114 ~i~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~ 192 (458)
T d1ibrb_ 114 GIACAEIPVN-QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLA 192 (458)
T ss_dssp HHHHHHGGGT-CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHH
T ss_pred HHHHHhCCcc-cCcchhHHHHHHHHhhcchHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhcccccCHHHHHH
Confidence 6655 22111 124678888888866 557788888999988874332211111112246777777742 356789999
Q ss_pred HHHHHHhhcCCCC--CCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCC
Q 004225 501 ATKTLSRFCQGKP--EPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLP 578 (767)
Q Consensus 501 ~~~~L~~l~~~~~--~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~ 578 (767)
++.++.++..... ...........+.+...+.+++++++..++.++..++..........+.....+.+.....+.+.
T Consensus 193 a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 272 (458)
T d1ibrb_ 193 ATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDID 272 (458)
T ss_dssp HHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSH
T ss_pred HHHHHHHHHHhhhhhhhhHHHHHHhHhhHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccH
Confidence 9999999886542 12233344567777888889999999999999999986554332222222234445556666666
Q ss_pred CCcccchHHHHHhhhhccCCc-----------------ceeeh----------------------------hhhHHHHHH
Q 004225 579 FPFGLTPPLWTVRYIVKGDGF-----------------LTQCT----------------------------GIAKEACRT 613 (767)
Q Consensus 579 ~~~v~~~a~~~L~~l~~~~~~-----------------~~~~l----------------------------~v~~~a~~~ 613 (767)
+++..|+..+..++..... ..... .++..|..+
T Consensus 273 --~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~ 350 (458)
T d1ibrb_ 273 --EVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVC 350 (458)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhhHHHHHHHHHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHH
Confidence 7777777777666421100 00000 345556666
Q ss_pred HhhhccC-CHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHH
Q 004225 614 ISNITAG-NREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIV 692 (767)
Q Consensus 614 l~nl~~~-~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~ 692 (767)
+..++.. ..+... .+++.+.+.++++++.+|..|+.+|+.++.+...+..... -..+++.++..++++++.||
T Consensus 351 l~~l~~~~~~~~~~-----~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~-l~~i~~~l~~~l~d~~~~VR 424 (458)
T d1ibrb_ 351 LMLLATCCEDDIVP-----HVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPL-VIQAMPTLIELMKDPSVVVR 424 (458)
T ss_dssp HHHHHHHTTTTHHH-----HHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTT-TTTHHHHHHHGGGCSCHHHH
T ss_pred HHHHHHhccHhhhh-----HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhcCHhHHHHH-HHHHHHHHHHHhCCCCHHHH
Confidence 6555541 111111 2456677778888999999999999999865333322221 13478889999999999999
Q ss_pred HHHHHHHHHHHHhhh
Q 004225 693 TICLKGLENILKVGE 707 (767)
Q Consensus 693 ~~al~aL~~l~~~~~ 707 (767)
.+|+|+|++++....
T Consensus 425 ~~a~~~l~~i~~~~~ 439 (458)
T d1ibrb_ 425 DTAAWTVGRICELLP 439 (458)
T ss_dssp HHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999987543
No 36
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.97 E-value=9.5e-09 Score=118.61 Aligned_cols=338 Identities=14% Similarity=0.156 Sum_probs=210.3
Q ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHH--hcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh---hhhHHHH
Q 004225 361 LPGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVI--QSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVI 435 (767)
Q Consensus 361 i~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~--~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~~~~~~~ 435 (767)
+|.+.+.+.++++..+..|+.+++.++....+.+. -..+++.++..+++++ +.+|..|+|+++.++. .....-.
T Consensus 397 l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~-~~Vr~~a~~~l~~~~~~~~~~~~~~~ 475 (888)
T d1qbkb_ 397 LPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKK-ALVRSITCWTLSRYAHWVVSQPPDTY 475 (888)
T ss_dssp HHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSC-HHHHHHHHHHHHHTHHHHHSSCHHHH
T ss_pred HHHHHHhhccchhHHHHHHHHHhhhhhhhHHHHhcccchhhhHHHHHhccCCC-HHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 45556677889999999999999988743333322 1246788889998888 9999999999999987 2222222
Q ss_pred hCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCch-hHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCC--
Q 004225 436 DGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPR-DRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK-- 512 (767)
Q Consensus 436 ~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~-~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~-- 512 (767)
-..+++.++..+.++++.++..|+++|.+++..... ....+ ..+++.++..+ ...+...+..+..++..++...
T Consensus 476 ~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~--~~il~~l~~~l-~~~~~~~~~~~~~al~~l~~~~~~ 552 (888)
T d1qbkb_ 476 LKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYL--AYILDTLVFAF-SKYQHKNLLILYDAIGTLADSVGH 552 (888)
T ss_dssp TTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGH--HHHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHGG
T ss_pred hhhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhhhhhhHH--HHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHhhhc
Confidence 346788999999999999999999999999842211 11111 12445556665 4444555555444444443211
Q ss_pred CCCCccchhchHHHHHHHhc------------------------------------------------------------
Q 004225 513 PEPPFDQVRPALPALAQLVH------------------------------------------------------------ 532 (767)
Q Consensus 513 ~~~~~~~~~~~i~~L~~ll~------------------------------------------------------------ 532 (767)
...........++.+.....
T Consensus 553 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ 632 (888)
T d1qbkb_ 553 HLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYE 632 (888)
T ss_dssp GGCSHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSC
T ss_pred cccchHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 00000111111111111110
Q ss_pred CCCHHHHHHHHHHHHhhccCChhHH-HHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcc-eeeh------
Q 004225 533 SNDNDVLRYACEALSCLSDGTNDKI-QAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFL-TQCT------ 604 (767)
Q Consensus 533 ~~~~~v~~~a~~~L~~l~~~~~~~~-~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~-~~~l------ 604 (767)
..+.+....++.++..+...-.... ..+....+++.+...+++.+. +++..|+.+++.++...... ..++
T Consensus 633 ~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~l~~~~~--~vr~~a~~llgdl~~~~~~~~~~~l~~~~~~ 710 (888)
T d1qbkb_ 633 APDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMP--EVRQSSFALLGDLTKACFQHVKPCIADFMPI 710 (888)
T ss_dssp CCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHHHTCSSH--HHHHHHHHHHHHHHHHCGGGTGGGHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 1123344444444444443222222 222334577888888988888 99999999999887543322 1111
Q ss_pred ----------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCc--hhHHHHHHHHHHhhcCCCHHHHHHHH
Q 004225 605 ----------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEF--FTKKEAARAISNAISGGTHEQIKYLV 672 (767)
Q Consensus 605 ----------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~--~v~~~a~~~L~nl~~~~~~~~~~~l~ 672 (767)
+++..|+|++|.++....+.....+. .+++.|+..+++++. .++.+++.+++.++.. .++.....+
T Consensus 711 l~~~L~~~~~~v~~~a~~~ig~ia~~~~~~~~py~~-~il~~L~~il~~~~~~~~v~~n~~~~lgrl~~~-~p~~~~~~l 788 (888)
T d1qbkb_ 711 LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIP-MVLHQLVEIINRPNTPKTLLENTAITIGRLGYV-CPQEVAPML 788 (888)
T ss_dssp HHHTCCGGGHHHHHHHHHHHHHHHHHTGGGGGGGSH-HHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHH-CHHHHGGGG
T ss_pred HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHH-CHHHHHhhH
Confidence 68889999999887643333222222 368889999987654 5899999999999876 455433222
Q ss_pred HcCChHHHHhhhcC-CCHHHHHHHHHHHHHHHHhhh
Q 004225 673 RKGCIKPLCDLLLY-ADPEIVTICLKGLENILKVGE 707 (767)
Q Consensus 673 ~~~~i~~L~~ll~~-~~~~v~~~al~aL~~l~~~~~ 707 (767)
..+++.++..+.. .|.+-+..|..++..++....
T Consensus 789 -~~~~~~~~~~l~~~~d~~ek~~~~~g~~~~i~~~p 823 (888)
T d1qbkb_ 789 -QQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNP 823 (888)
T ss_dssp -GGTHHHHHHHHTTSCCSHHHHHHHHHHHHHHHHCG
T ss_pred -HHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHCc
Confidence 3477888877765 455667789999999887543
No 37
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.96 E-value=3e-09 Score=98.01 Aligned_cols=61 Identities=16% Similarity=0.258 Sum_probs=29.2
Q ss_pred cccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchh
Q 004225 199 TNNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEI 266 (767)
Q Consensus 199 ~~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~ 266 (767)
+++|+.|+++++. +.. .+....+++|++|++.+| .++++.+ ++++++|++|++++|+ ++++
T Consensus 127 l~~L~~L~l~~n~-l~~-~~~l~~~~~L~~L~l~~n-~l~~l~~---l~~l~~L~~L~ls~N~-i~~i 187 (199)
T d2omxa2 127 LTNLNRLELSSNT-ISD-ISALSGLTSLQQLNFSSN-QVTDLKP---LANLTTLERLDISSNK-VSDI 187 (199)
T ss_dssp CTTCSEEECCSSC-CCC-CGGGTTCTTCSEEECCSS-CCCCCGG---GTTCTTCCEEECCSSC-CCCC
T ss_pred hhhhHHhhhhhhh-hcc-cccccccccccccccccc-cccCCcc---ccCCCCCCEEECCCCC-CCCC
Confidence 3455555555442 222 122344556666666554 2333321 2345666666666653 4444
No 38
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.96 E-value=3e-09 Score=98.99 Aligned_cols=166 Identities=16% Similarity=0.224 Sum_probs=100.8
Q ss_pred CcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccc
Q 004225 30 SFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRT 109 (767)
Q Consensus 30 ~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~ 109 (767)
.+.+|++|++.++. ++.+ ..+..+++|++|+++++ ++++++. ...+++|+.|++++|. ++...
T Consensus 44 ~L~~L~~L~l~~~~-i~~l----------~~l~~l~~L~~L~L~~n-~i~~l~~----~~~l~~L~~L~l~~n~-i~~l~ 106 (210)
T d1h6ta2 44 ELNSIDQIIANNSD-IKSV----------QGIQYLPNVTKLFLNGN-KLTDIKP----LANLKNLGWLFLDENK-VKDLS 106 (210)
T ss_dssp HHHTCCEEECTTSC-CCCC----------TTGGGCTTCCEEECCSS-CCCCCGG----GTTCTTCCEEECCSSC-CCCGG
T ss_pred HhcCccEEECcCCC-CCCc----------hhHhhCCCCCEEeCCCc-cccCccc----cccCcccccccccccc-ccccc
Confidence 46677777777664 4433 23455778888888776 3555442 3457788888887764 33321
Q ss_pred cccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecCCCCCCCcccccCCceeeeeeccccc
Q 004225 110 TSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLE 189 (767)
Q Consensus 110 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~ 189 (767)
. + ..+++|+.|++.++.... ...+..+++++.+.++++.. .
T Consensus 107 -~-l--~~l~~L~~L~l~~~~~~~--------------~~~l~~l~~l~~l~~~~n~l---------------------~ 147 (210)
T d1h6ta2 107 -S-L--KDLKKLKSLSLEHNGISD--------------INGLVHLPQLESLYLGNNKI---------------------T 147 (210)
T ss_dssp -G-G--TTCTTCCEEECTTSCCCC--------------CGGGGGCTTCCEEECCSSCC---------------------C
T ss_pred -c-c--cccccccccccccccccc--------------cccccccccccccccccccc---------------------c
Confidence 1 2 357788888887665311 01244555666666555431 1
Q ss_pred chhhccccccccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEcc
Q 004225 190 HILIRESSVTNNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKS 259 (767)
Q Consensus 190 ~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~ 259 (767)
.. .....+++|+++++.++. +..+. ....+++|++|++++| .+++++. +.++++|++|++++
T Consensus 148 ~~--~~~~~l~~L~~l~l~~n~-l~~i~-~l~~l~~L~~L~Ls~N-~i~~l~~---l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 148 DI--TVLSRLTKLDTLSLEDNQ-ISDIV-PLAGLTKLQNLYLSKN-HISDLRA---LAGLKNLDVLELFS 209 (210)
T ss_dssp CC--GGGGGCTTCSEEECCSSC-CCCCG-GGTTCTTCCEEECCSS-CCCBCGG---GTTCTTCSEEEEEE
T ss_pred cc--cccccccccccccccccc-ccccc-cccCCCCCCEEECCCC-CCCCChh---hcCCCCCCEEEccC
Confidence 11 112235788888887764 34432 3567889999999887 4666642 45688999998864
No 39
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.89 E-value=6.9e-09 Score=96.43 Aligned_cols=165 Identities=15% Similarity=0.182 Sum_probs=112.6
Q ss_pred CCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcch
Q 004225 64 FPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERT 143 (767)
Q Consensus 64 ~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~ 143 (767)
+.+|++|++.++ .++.+.. ...|++|++|++++|. +++.. +...+++|+.|++++|.. ++
T Consensus 45 L~~L~~L~l~~~-~i~~l~~----l~~l~~L~~L~L~~n~-i~~l~----~~~~l~~L~~L~l~~n~i-~~--------- 104 (210)
T d1h6ta2 45 LNSIDQIIANNS-DIKSVQG----IQYLPNVTKLFLNGNK-LTDIK----PLANLKNLGWLFLDENKV-KD--------- 104 (210)
T ss_dssp HHTCCEEECTTS-CCCCCTT----GGGCTTCCEEECCSSC-CCCCG----GGTTCTTCCEEECCSSCC-CC---------
T ss_pred hcCccEEECcCC-CCCCchh----HhhCCCCCEEeCCCcc-ccCcc----ccccCccccccccccccc-cc---------
Confidence 568899999886 4555542 4568999999999984 43322 124689999999998753 22
Q ss_pred hcchhhHhhhccccceeeecCCCCCCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCccccccCCCCcC
Q 004225 144 ILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDHLVNLVPPSTSF 223 (767)
Q Consensus 144 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~~~~~ 223 (767)
+ ..+..+++|+.|.+.++..... +....+++|+.+++.++. +.. ......+
T Consensus 105 ---l-~~l~~l~~L~~L~l~~~~~~~~-----------------------~~l~~l~~l~~l~~~~n~-l~~-~~~~~~l 155 (210)
T d1h6ta2 105 ---L-SSLKDLKKLKSLSLEHNGISDI-----------------------NGLVHLPQLESLYLGNNK-ITD-ITVLSRL 155 (210)
T ss_dssp ---G-GGGTTCTTCCEEECTTSCCCCC-----------------------GGGGGCTTCCEEECCSSC-CCC-CGGGGGC
T ss_pred ---c-cccccccccccccccccccccc-----------------------cccccccccccccccccc-ccc-ccccccc
Confidence 1 1255677888888877652111 122335788999987754 333 2345678
Q ss_pred CCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhccccccccccccccccccceEeecC
Q 004225 224 QNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVITFRELKELKLVD 291 (767)
Q Consensus 224 ~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 291 (767)
++|+.++++++. +.++.. +.++++|++|++++|. +++++ .... +++|+.|++++
T Consensus 156 ~~L~~l~l~~n~-l~~i~~---l~~l~~L~~L~Ls~N~-i~~l~-~l~~--------l~~L~~L~Ls~ 209 (210)
T d1h6ta2 156 TKLDTLSLEDNQ-ISDIVP---LAGLTKLQNLYLSKNH-ISDLR-ALAG--------LKNLDVLELFS 209 (210)
T ss_dssp TTCSEEECCSSC-CCCCGG---GTTCTTCCEEECCSSC-CCBCG-GGTT--------CTTCSEEEEEE
T ss_pred cccccccccccc-cccccc---ccCCCCCCEEECCCCC-CCCCh-hhcC--------CCCCCEEEccC
Confidence 999999999884 555532 4579999999999874 77664 2333 89999999864
No 40
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=1.9e-08 Score=98.54 Aligned_cols=108 Identities=15% Similarity=0.180 Sum_probs=47.1
Q ss_pred CccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCC
Q 004225 7 NLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDL 86 (767)
Q Consensus 7 ~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~ 86 (767)
++++|+|+++ +++.+++ ..+.++++|++|+++++. +..+.. .....++.++++.......+..++...
T Consensus 33 ~~~~L~Ls~N-~i~~i~~-~~f~~l~~L~~L~ls~n~-l~~i~~--------~~~~~~~~~~~l~~~~~~~~~~l~~~~- 100 (284)
T d1ozna_ 33 ASQRIFLHGN-RISHVPA-ASFRACRNLTILWLHSNV-LARIDA--------AAFTGLALLEQLDLSDNAQLRSVDPAT- 100 (284)
T ss_dssp TCSEEECTTS-CCCEECT-TTTTTCTTCCEEECCSSC-CCEECT--------TTTTTCTTCCEEECCSCTTCCCCCTTT-
T ss_pred CCCEEECcCC-cCCCCCH-HHhhcccccccccccccc-cccccc--------ccccccccccccccccccccccccchh-
Confidence 3555565554 2444432 223455555666555443 333210 112224455555544444444443322
Q ss_pred cccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcc
Q 004225 87 DILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKH 130 (767)
Q Consensus 87 ~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~ 130 (767)
...+++|++|++.++.... .....+ ..+++|+.+++.++.
T Consensus 101 -~~~l~~L~~L~l~~n~~~~-~~~~~~--~~~~~L~~l~l~~N~ 140 (284)
T d1ozna_ 101 -FHGLGRLHTLHLDRCGLQE-LGPGLF--RGLAALQYLYLQDNA 140 (284)
T ss_dssp -TTTCTTCCEEECTTSCCCC-CCTTTT--TTCTTCCEEECCSSC
T ss_pred -hcccccCCEEecCCccccc-cccccc--chhcccchhhhcccc
Confidence 2345555555555554211 111111 234555555555543
No 41
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.87 E-value=9.1e-09 Score=94.72 Aligned_cols=162 Identities=14% Similarity=0.230 Sum_probs=104.6
Q ss_pred CcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccc
Q 004225 30 SFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRT 109 (767)
Q Consensus 30 ~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~ 109 (767)
.++++++|++.++. +.++ +.+..+++|++|+++++ ++++++. ...+++|+.|++++|....- .
T Consensus 38 ~l~~l~~L~l~~~~-i~~l----------~~l~~l~nL~~L~Ls~N-~l~~~~~----l~~l~~L~~L~l~~n~~~~~-~ 100 (199)
T d2omxa2 38 DLDQVTTLQADRLG-IKSI----------DGVEYLNNLTQINFSNN-QLTDITP----LKNLTKLVDILMNNNQIADI-T 100 (199)
T ss_dssp HHTTCCEEECTTSC-CCCC----------TTGGGCTTCCEEECCSS-CCCCCGG----GTTCTTCCEEECCSSCCCCC-G
T ss_pred HhcCCCEEECCCCC-CCCc----------cccccCCCcCcCccccc-cccCccc----ccCCcccccccccccccccc-c
Confidence 56778888887774 5544 33455788888888886 4665543 45678888888887753321 1
Q ss_pred cccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecCCCCCCCcccccCCceeeeeeccccc
Q 004225 110 TSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLE 189 (767)
Q Consensus 110 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~ 189 (767)
. + ..+++|+.|++.++..... ..+..+++|+.|.++++. +.
T Consensus 101 -~-l--~~l~~L~~L~l~~~~~~~~--------------~~~~~l~~L~~L~l~~n~---------------------l~ 141 (199)
T d2omxa2 101 -P-L--ANLTNLTGLTLFNNQITDI--------------DPLKNLTNLNRLELSSNT---------------------IS 141 (199)
T ss_dssp -G-G--TTCTTCSEEECCSSCCCCC--------------GGGTTCTTCSEEECCSSC---------------------CC
T ss_pred -c-c--ccccccccccccccccccc--------------cccchhhhhHHhhhhhhh---------------------hc
Confidence 1 2 3678888888887653221 124456677777766653 11
Q ss_pred chhhccccccccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEE
Q 004225 190 HILIRESSVTNNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYM 255 (767)
Q Consensus 190 ~~~~~~~~~~~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L 255 (767)
.+ +....+++|++|++.++. ++.+ +....+++|++|++++|+ ++++.. +.++++|++|
T Consensus 142 ~~--~~l~~~~~L~~L~l~~n~-l~~l-~~l~~l~~L~~L~ls~N~-i~~i~~---l~~L~~L~~L 199 (199)
T d2omxa2 142 DI--SALSGLTSLQQLNFSSNQ-VTDL-KPLANLTTLERLDISSNK-VSDISV---LAKLTNLESL 199 (199)
T ss_dssp CC--GGGTTCTTCSEEECCSSC-CCCC-GGGTTCTTCCEEECCSSC-CCCCGG---GGGCTTCSEE
T ss_pred cc--cccccccccccccccccc-ccCC-ccccCCCCCCEEECCCCC-CCCCcc---ccCCCCCCcC
Confidence 11 223345888999998764 4443 346778999999999984 777642 3568888876
No 42
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.84 E-value=4.5e-08 Score=99.30 Aligned_cols=80 Identities=20% Similarity=0.224 Sum_probs=57.7
Q ss_pred CCCCCCCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeeccccccccc
Q 004225 1 MSCGIQNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTS 80 (767)
Q Consensus 1 ~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~ 80 (767)
+|..+++|++|+++++ .++.+| ..+++|++|++.++. ++.+ +. ..++|++|+++++ .++.
T Consensus 53 lp~~~~~L~~L~Ls~N-~l~~lp-----~~~~~L~~L~l~~n~-l~~l----------~~--lp~~L~~L~L~~n-~l~~ 112 (353)
T d1jl5a_ 53 LPELPPHLESLVASCN-SLTELP-----ELPQSLKSLLVDNNN-LKAL----------SD--LPPLLEYLGVSNN-QLEK 112 (353)
T ss_dssp CCSCCTTCSEEECCSS-CCSSCC-----CCCTTCCEEECCSSC-CSCC----------CS--CCTTCCEEECCSS-CCSS
T ss_pred CCCCCCCCCEEECCCC-CCcccc-----cchhhhhhhhhhhcc-cchh----------hh--hcccccccccccc-cccc
Confidence 4666789999999875 677775 346789999998874 4433 11 1357999999876 4666
Q ss_pred ccCCCCcccCCCCccEEEeccCCc
Q 004225 81 FCTGDLDILEFPSLKELRISKCPE 104 (767)
Q Consensus 81 ~~~~~~~~~~~~~L~~L~l~~c~~ 104 (767)
++. ...+++|+.|++.+|..
T Consensus 113 lp~----~~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 113 LPE----LQNSSFLKIIDVDNNSL 132 (353)
T ss_dssp CCC----CTTCTTCCEEECCSSCC
T ss_pred ccc----hhhhccceeeccccccc
Confidence 664 34688999999987653
No 43
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.81 E-value=7.8e-08 Score=101.16 Aligned_cols=368 Identities=12% Similarity=0.055 Sum_probs=231.1
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCC-CCHHHHHHHHHHHHHHHh-h--h-hHHH--
Q 004225 362 PGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTRE-DNPQLQLEAARALTNIAS-E--N-TNVV-- 434 (767)
Q Consensus 362 ~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~-~~~~~~~~a~~~L~~l~~-~--~-~~~~-- 434 (767)
-.+++.+.++|.+++.+|-+.|..+...+. .+.+..|...+.++ .+..+|..|+..|.+... . . ....
T Consensus 3 ~~il~~~~s~d~~~r~~A~~~L~~~~~~~~-----~~~~~~l~~il~~~~~~~~~R~~A~i~lk~~l~~~~~~~~~~~~~ 77 (458)
T d1ibrb_ 3 ITILEKTVSPDRLELEAAQKFLERAAVENL-----PTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQ 77 (458)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhcCc-----hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhccCchhhhHHhh
Confidence 456677889999999999999998762111 12356677766554 346899999999988886 1 1 1110
Q ss_pred --------HhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHc-cCCChHHHHHHHHHH
Q 004225 435 --------IDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLN-KHAKPSMLRNATKTL 505 (767)
Q Consensus 435 --------~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~-~~~~~~~~~~~~~~L 505 (767)
....+.+.+++.+.++++.+ ..++.++..++...... -.-.+.++.+++.+. ...+...++.++.++
T Consensus 78 ~~~~l~~~~~~~i~~~ll~~~~~~~~~~-~~~~~~~~~i~~~~~~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~l 153 (458)
T d1ibrb_ 78 RWLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPV---NQWPELIPQLVANVTNPNSTEHMKESTLEAI 153 (458)
T ss_dssp HHHTSCHHHHHHHHHHHHHHTTCCCSSS-CSHHHHHHHHHHHHGGG---TCCTTHHHHHHHHHHCTTCCHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHHHHhccCCCcHHH-HHHHHHHHHHHHHhCCc---ccCcchhHHHHHHHHhhcchHHHHHHHHHHH
Confidence 11224455677776655433 34455555554211000 001246777888774 334567788899999
Q ss_pred HhhcCCC-CCCCccchhchHHHHHHHhcCC--CHHHHHHHHHHHHhhccCChhHHH-HHHhcCcHHHHHHHhcCCCCCCc
Q 004225 506 SRFCQGK-PEPPFDQVRPALPALAQLVHSN--DNDVLRYACEALSCLSDGTNDKIQ-AVIEADVCPRLVKLLLHPLPFPF 581 (767)
Q Consensus 506 ~~l~~~~-~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~~L~~l~~~~~~~~~-~~~~~~~~~~L~~lL~~~~~~~~ 581 (767)
..++... +.........+++.++..+.++ +.+++..++.++..+......... ........+.+...+.++++ +
T Consensus 154 ~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 231 (458)
T d1ibrb_ 154 GYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDT--R 231 (458)
T ss_dssp HHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSH--H
T ss_pred HHHHhhccchhhhhhHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHhHhhHHHHhcCCCH--H
Confidence 8887654 3334445567788888888754 478999999999999876543221 11222366778888888888 9
Q ss_pred ccchHHHHHhhhhccCCcce-eeh-----------------hhhHHHHHHHhhhccCCHHHHHHH---------------
Q 004225 582 GLTPPLWTVRYIVKGDGFLT-QCT-----------------GIAKEACRTISNITAGNREQIQVV--------------- 628 (767)
Q Consensus 582 v~~~a~~~L~~l~~~~~~~~-~~l-----------------~v~~~a~~~l~nl~~~~~~~~~~~--------------- 628 (767)
++..++.++..++....... .++ +++..|+..+..++..........
T Consensus 232 ~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (458)
T d1ibrb_ 232 VRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSK 311 (458)
T ss_dssp HHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCC
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhhHHHHHHH
Confidence 99999999999985443221 111 556677776666643211111000
Q ss_pred -----HHcCCHHHHHHHHhc-------CCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHH
Q 004225 629 -----IDAGVIGPLVDLLQN-------AEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICL 696 (767)
Q Consensus 629 -----~~~~~i~~L~~ll~~-------~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al 696 (767)
.-..+++.+.+.+.. .+..++..|..++..++.....+.... +++.+...++++++.+|.+|+
T Consensus 312 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~~-----l~~~i~~~l~s~~~~~r~aal 386 (458)
T d1ibrb_ 312 FYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPH-----VLPFIKEHIKNPDWRYRDAAV 386 (458)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTTHHHH-----HHHHHHHHTTCSSHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHhhhhcchhhhccccccHHHHHHHHHHHHHHhccHhhhhH-----HHHHHHHHhcCCCHHHHHHHH
Confidence 001123444444432 234688888888888876433233222 566777888899999999999
Q ss_pred HHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 004225 697 KGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYW 758 (767)
Q Consensus 697 ~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~ 758 (767)
.+|..++....... ..++. ...++.+...++++++.||..|.+++.++.
T Consensus 387 ~~l~~i~~~~~~~~--------~~~~l-----~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~ 435 (458)
T d1ibrb_ 387 MAFGCILEGPEPSQ--------LKPLV-----IQAMPTLIELMKDPSVVVRDTAAWTVGRIC 435 (458)
T ss_dssp HHHHHTSSSSCTTT--------TCTTT-----TTHHHHHHHGGGCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHhH--------HHHHH-----HHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 99998875322111 01111 234677888899999999999999998874
No 44
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=1.8e-07 Score=111.59 Aligned_cols=335 Identities=12% Similarity=0.072 Sum_probs=225.1
Q ss_pred CHHHHHhhhcCCCHHHHHHHHHHHHHhcCCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhh--------
Q 004225 360 SLPGMLAGVWSDDSGLQLEATTWFRKLLLPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENT-------- 431 (767)
Q Consensus 360 ~i~~l~~~l~s~~~~~~~~a~~~L~~l~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~-------- 431 (767)
.++.+++.+.+.++++|..|++.|..++.......+ ..+++.|+..+.+++ ...+..+..+|..+.....
T Consensus 46 i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~~~~~~~-~~l~~~L~~~l~~~~-~~~r~~~~~~L~~i~~~l~~~~~~~~~ 123 (1207)
T d1u6gc_ 46 VVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQV-ETIVDTLCTNMLSDK-EQLRDISSIGLKTVIGELPPASSGSAL 123 (1207)
T ss_dssp HHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHHH-HHHHHHHHHHTTCSS-SHHHHHHHHHHHHHHHHCC-----CCT
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCcHhhH-HHHHHHHHHHhcCCc-hhhhHHHHHHHHHHHHhcccccccchh
Confidence 388899999999999999999999999832222222 246788888777777 6888888888887765111
Q ss_pred HHHHhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcC
Q 004225 432 NVVIDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQ 510 (767)
Q Consensus 432 ~~~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~ 510 (767)
...+....++.+...+.. .+..++..|+.+++.+....+...... ...+++.++..+ .+++..+|+.|+.+++.++.
T Consensus 124 ~~~~~~~l~~~l~~~~~~~~~~~v~~~al~~l~~l~~~~g~~l~~~-~~~il~~l~~~l-~~~~~~vR~~A~~~l~~l~~ 201 (1207)
T d1u6gc_ 124 AANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNF-HPSILTCLLPQL-TSPRLAVRKRTIIALGHLVM 201 (1207)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHHTCSSCTTT-HHHHHHHHGGGG-GCSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHhhHhhHHH-HHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHH
Confidence 111111234455555544 678899999999998875333211000 112456666666 78889999999999999986
Q ss_pred CCCCCCccchhchHHHHHHHhc-CCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHH
Q 004225 511 GKPEPPFDQVRPALPALAQLVH-SNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWT 589 (767)
Q Consensus 511 ~~~~~~~~~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~ 589 (767)
..+. ......++.++..+. +.+..++..++.++..++...+....... ..+++.+.+.+.+.+. +++..++.+
T Consensus 202 ~~~~---~~~~~~~~~ll~~l~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~l-~~i~~~l~~~l~~~~~--~~r~~al~~ 275 (1207)
T d1u6gc_ 202 SCGN---IVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYL-EKIIPLVVKFCNVDDD--ELREYCIQA 275 (1207)
T ss_dssp TC-------CTTHHHHHHHHHHHTCSSCSCTTHHHHHHHHHHHSSGGGTTSC-TTHHHHHHHHHSSCCT--TTHHHHHHH
T ss_pred HCCH---HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHcchhhHHHH-HHHHHHHHHHhcCccH--HHHHHHHHH
Confidence 6422 223445666665554 45566677777888887755433222111 3578999999999988 999999998
Q ss_pred HhhhhccCCccee-eh-----------------------------------------------------hhhHHHHHHHh
Q 004225 590 VRYIVKGDGFLTQ-CT-----------------------------------------------------GIAKEACRTIS 615 (767)
Q Consensus 590 L~~l~~~~~~~~~-~l-----------------------------------------------------~v~~~a~~~l~ 615 (767)
+..+....+.... ++ .++..|+.++.
T Consensus 276 l~~l~~~~~~~~~~~~~~ii~~~l~~l~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~vR~~a~~~L~ 355 (1207)
T d1u6gc_ 276 FESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLD 355 (1207)
T ss_dssp HHHHHHCTTCCCHHHHHHHHHHHTTCCCCC------------------------------------CTTHHHHHHHHHHH
T ss_pred HHHHHHhChhhhhhhHHHHHHHHHHHHhcCcchhhhhHHHHHhhhhhhccchhhhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 8888643321100 00 67888888998
Q ss_pred hhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCC-----------------CHHHHHHHHH--cCC
Q 004225 616 NITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGG-----------------THEQIKYLVR--KGC 676 (767)
Q Consensus 616 nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~-----------------~~~~~~~l~~--~~~ 676 (767)
.++...++...... ..+++.++..+...++.+|..+..++..+.... .+. ..+.+ ..+
T Consensus 356 ~l~~~~~~~l~~~~-~~~~~~L~~~l~d~~~~vr~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~i 432 (1207)
T d1u6gc_ 356 AVVSTRHEMLPEFY-KTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPL--TMLQSQVPNI 432 (1207)
T ss_dssp HHHTTCCTTHHHHH-TTTHHHHHSTTSCSSSHHHHHHHHHHHHHHHHHCCC------------CCCHH--HHHHHHTTHH
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhccchhhhhhchHHHHhhcchH--HHHHHHhHHH
Confidence 88875555444433 358899999999999999999999988775310 011 11111 235
Q ss_pred hHHHHhhhcCCCHHHHHHHHHHHHHHHHhhh
Q 004225 677 IKPLCDLLLYADPEIVTICLKGLENILKVGE 707 (767)
Q Consensus 677 i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~ 707 (767)
++.+...+.+.++.++..+..++..+.....
T Consensus 433 ~~~l~~~l~~~~~~~r~~~~~~l~~l~~~~~ 463 (1207)
T d1u6gc_ 433 VKALHKQMKEKSVKTRQCCFNMLTELVNVLP 463 (1207)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHhcCCchhHHHHHHHHHHHHHHHcc
Confidence 6677778888999999999999999887543
No 45
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.73 E-value=1.8e-07 Score=107.27 Aligned_cols=372 Identities=11% Similarity=0.057 Sum_probs=228.5
Q ss_pred CHHHHHhhhcC--CCHHHHHHHHHHHHHhcCCC-h---H----------HHHhcCchHHHHhhccCCCCHHHHHHHHHHH
Q 004225 360 SLPGMLAGVWS--DDSGLQLEATTWFRKLLLPP-S---E----------KVIQSGVVARFVEFLTREDNPQLQLEAARAL 423 (767)
Q Consensus 360 ~i~~l~~~l~s--~~~~~~~~a~~~L~~l~~~~-~---~----------~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L 423 (767)
-+..+.+.+.+ .+..+|..|+-.|++..... . . .-.+..+...+++.+.+++ . ++..++.++
T Consensus 36 f~~~L~~i~~~~~~~~~iR~~A~i~lKn~i~~~~~~~~~~~~~~~~~i~~~~k~~ik~~ll~~l~~~~-~-~~~~~a~~i 113 (876)
T d1qgra_ 36 FLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTET-Y-RPSSASQCV 113 (876)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTTCC-S-SSCHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhccccchhhhhhcccccCCHHHHHHHHHHHHHHhcCCc-H-HHHHHHHHH
Confidence 35566666654 34678999999999877111 0 0 1123335567778887766 3 455678888
Q ss_pred HHHHh-hhhHHHHhCCChHHHHHhhCCC--CHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHc-cCCChHHHH
Q 004225 424 TNIAS-ENTNVVIDGGAVPIFVKLLSSP--SDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLN-KHAKPSMLR 499 (767)
Q Consensus 424 ~~l~~-~~~~~~~~~~~l~~L~~lL~~~--~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~-~~~~~~~~~ 499 (767)
..++. +.... .-.+.+|.+++.+.++ ...++..++.++..++.......-.-.-...++.+++.+. .+.+.+++.
T Consensus 114 ~~i~~~~~p~~-~Wpeli~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~ 192 (876)
T d1qgra_ 114 AGIACAEIPVN-QWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKL 192 (876)
T ss_dssp HHHHHHHGGGT-CCTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHH
T ss_pred HHHHHHHCCcc-ccHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHH
Confidence 88877 32211 1236788999988664 4778888999999987432211000011235667777774 334678999
Q ss_pred HHHHHHHhhcCCCC--CCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcCCC
Q 004225 500 NATKTLSRFCQGKP--EPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLHPL 577 (767)
Q Consensus 500 ~~~~~L~~l~~~~~--~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~~~ 577 (767)
.++.++.+...... ........-+++.+...+++++++++..++.++..++...++.........+.+.+.....+.+
T Consensus 193 ~a~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 272 (876)
T d1qgra_ 193 AATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDI 272 (876)
T ss_dssp HHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999888765431 1122223346677778888999999999999999998765554444444455666677777776
Q ss_pred CCCcccchHHHHHhhhhccCCc-----------------ceeeh----------------------------hhhHHHHH
Q 004225 578 PFPFGLTPPLWTVRYIVKGDGF-----------------LTQCT----------------------------GIAKEACR 612 (767)
Q Consensus 578 ~~~~v~~~a~~~L~~l~~~~~~-----------------~~~~l----------------------------~v~~~a~~ 612 (767)
. +++..++..+..++..... ....+ .++..|..
T Consensus 273 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~ 350 (876)
T d1qgra_ 273 D--EVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGV 350 (876)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHH
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHH
Confidence 6 7777777666655421110 00000 23333333
Q ss_pred HHhhhccCCHHHHHHHHHcCCH----HHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCC
Q 004225 613 TISNITAGNREQIQVVIDAGVI----GPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYAD 688 (767)
Q Consensus 613 ~l~nl~~~~~~~~~~~~~~~~i----~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~ 688 (767)
++..++. .....++ +.+.+.+.+.++..+..++.+++.+..+........... .+++.+...+.+++
T Consensus 351 ~l~~l~~--------~~~~~~~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~l~d~~ 421 (876)
T d1qgra_ 351 CLMLLAT--------CCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVI-QAMPTLIELMKDPS 421 (876)
T ss_dssp HHHHHHH--------HHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHHHTCSS
T ss_pred HHHHHHH--------HhhhhhhhhhHHHHHHhhccchHHHHHHHHHHHHhhhhhhhHHHHHHHHH-HHHHHHHHhhcCCc
Confidence 3333322 1112233 444555567788899999999999987656555544333 37888889999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 004225 689 PEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYW 758 (767)
Q Consensus 689 ~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~ 758 (767)
+.++..+++++..++......... ..+...+ ++.+.... +.++.++..+.+.+..+.
T Consensus 422 ~~vr~~a~~~l~~~~~~~~~~~~~-------~~~~~~~-----~~~l~~~l-~~~~~v~~~~~~~l~~l~ 478 (876)
T d1qgra_ 422 VVVRDTAAWTVGRICELLPEAAIN-------DVYLAPL-----LQCLIEGL-SAEPRVASNVCWAFSSLA 478 (876)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGTSS-------TTTHHHH-----HHHHHHHT-TSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcchhhhh-------HHHhhhH-----HHHHHHHh-cCCHHHHHHHHHHHHHHH
Confidence 999999999999999864432211 1111111 33344333 346778888877776553
No 46
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.69 E-value=4.2e-07 Score=103.84 Aligned_cols=335 Identities=12% Similarity=0.082 Sum_probs=207.1
Q ss_pred CHHHHHhhhcC--CCHHHHHHHHHHHHHhc-CCChHH--------------HHhcCchHHHHhhccCCCCHHHHHHHHHH
Q 004225 360 SLPGMLAGVWS--DDSGLQLEATTWFRKLL-LPPSEK--------------VIQSGVVARFVEFLTREDNPQLQLEAARA 422 (767)
Q Consensus 360 ~i~~l~~~l~s--~~~~~~~~a~~~L~~l~-~~~~~~--------------i~~~g~i~~L~~ll~~~~~~~~~~~a~~~ 422 (767)
-++.+.+.+.+ .+..++..|+..|++.. ...... -.+..+-..+++.+.+++ +.++..++.+
T Consensus 40 ~~~~l~~il~~~~~~~~~r~~A~i~lkn~i~~~~~~~~~~~~~~~~~~i~~~~~~~ik~~ll~~l~~~~-~~vr~~~a~~ 118 (861)
T d2bpta1 40 FAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIE-PRIANAAAQL 118 (861)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHTTTCCSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCSS-HHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHhhcccchhhhhHHhhhHhcCCHHHHHHHHHHHHHHHcCCC-HHHHHHHHHH
Confidence 35566777754 45678888999998877 211100 011223456677777777 9999999999
Q ss_pred HHHHHh-hhhHHHHhCCChHHHHHhhCCC-CHHHHHHHHHHHHHHhcCCchhHHHHHh--cCCHHHHHHHHc-cCCChHH
Q 004225 423 LTNIAS-ENTNVVIDGGAVPIFVKLLSSP-SDDVREKAVWALGNIARSSPRDRDLVLS--EKALIPLLAQLN-KHAKPSM 497 (767)
Q Consensus 423 L~~l~~-~~~~~~~~~~~l~~L~~lL~~~-~~~v~~~a~~~L~nl~~~~~~~~~~~~~--~g~i~~L~~ll~-~~~~~~~ 497 (767)
+..++. +.... .-...++.|++.+.++ +..++..|+.+++.++.......+.+.. ...+..+++.+. ...+..+
T Consensus 119 i~~i~~~~~p~~-~wpeli~~L~~~~~s~~~~~~~~~al~~l~~i~e~~~~~~~~~~~~~~~il~~i~~~~~~~~~~~~v 197 (861)
T d2bpta1 119 IAAIADIELPHG-AWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAV 197 (861)
T ss_dssp HHHHHHHHGGGT-CCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHH
T ss_pred HHHHHHHhCCcC-chHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhcccCCHHH
Confidence 999987 32210 0012567777777764 4678888999999998543322111111 012334444442 4556889
Q ss_pred HHHHHHHHHhhcCCCC--CCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHHhcCcHHHHHHHhcC
Q 004225 498 LRNATKTLSRFCQGKP--EPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVIEADVCPRLVKLLLH 575 (767)
Q Consensus 498 ~~~~~~~L~~l~~~~~--~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~~~~L~~lL~~ 575 (767)
+..++.++.++...-+ ..........++.+...+++++++++..++.++..++.............-+...+....++
T Consensus 198 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~ 277 (861)
T d2bpta1 198 RLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKS 277 (861)
T ss_dssp HHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhHhHHhhhhhhHHHHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999998876541 12223345577788888899999999999999999886544333322222233444555566
Q ss_pred CCCCCcccchHHHHHhhhhccCCcc-----------eeeh------------------------------hhhHHHHHHH
Q 004225 576 PLPFPFGLTPPLWTVRYIVKGDGFL-----------TQCT------------------------------GIAKEACRTI 614 (767)
Q Consensus 576 ~~~~~~v~~~a~~~L~~l~~~~~~~-----------~~~l------------------------------~v~~~a~~~l 614 (767)
.++ +++..++..+..++...... .... ..+..+..++
T Consensus 278 ~~~--~v~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l 355 (861)
T d2bpta1 278 PND--KVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACL 355 (861)
T ss_dssp SSH--HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHH
T ss_pred ccH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHH
Confidence 666 78888877776664321100 0000 1222222222
Q ss_pred hhhccCCHHHHHHHHHcCCHHHH----HHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHH
Q 004225 615 SNITAGNREQIQVVIDAGVIGPL----VDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPE 690 (767)
Q Consensus 615 ~nl~~~~~~~~~~~~~~~~i~~L----~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~ 690 (767)
..++. .....+++.+ ...+.+.++..+..|+.+++.++............. .+++.+...+.++++.
T Consensus 356 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~-~~l~~l~~~l~d~~~~ 426 (861)
T d2bpta1 356 QLFAQ--------NCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMNDQSLQ 426 (861)
T ss_dssp HHHHH--------HHGGGGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGGCSCHH
T ss_pred HHHHh--------hcchhhhhhhcchhhhhhhhHHHHHHHHHHHHHHHHHhhcchhhHHHHHH-HHHHHHHHHhcCcchh
Confidence 22211 1112233333 344456678899999999999998766655544333 3788899999999999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 004225 691 IVTICLKGLENILKVGE 707 (767)
Q Consensus 691 v~~~al~aL~~l~~~~~ 707 (767)
++..+++++..++....
T Consensus 427 vr~~a~~~l~~l~~~~~ 443 (861)
T d2bpta1 427 VKETTAWCIGRIADSVA 443 (861)
T ss_dssp HHHHHHHHHHHHHHHHG
T ss_pred hhhHHHHHHHHHHHHhc
Confidence 99999999999987644
No 47
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.67 E-value=1.8e-06 Score=98.53 Aligned_cols=376 Identities=11% Similarity=0.094 Sum_probs=208.4
Q ss_pred HHHHHhhhcCCCHHHHHHHHHHHHHhc---CCChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh-h--hhHHH
Q 004225 361 LPGMLAGVWSDDSGLQLEATTWFRKLL---LPPSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS-E--NTNVV 434 (767)
Q Consensus 361 i~~l~~~l~s~~~~~~~~a~~~L~~l~---~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~-~--~~~~~ 434 (767)
++.+.+.+++++++++..++..+..++ .......+..-+...+....++.+ +.++..+...+..++. + .....
T Consensus 226 ~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~-~~v~~~~~~~l~~l~~~~~~~~~~~ 304 (861)
T d2bpta1 226 MQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPN-DKVASMTVEFWSTICEEEIDIAYEL 304 (861)
T ss_dssp HHHHHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677788899999999999998887 222222222222233344445555 7777777777766654 0 00000
Q ss_pred H---------------------------------------------------------hCCChHH----HHHhhCCCCHH
Q 004225 435 I---------------------------------------------------------DGGAVPI----FVKLLSSPSDD 453 (767)
Q Consensus 435 ~---------------------------------------------------------~~~~l~~----L~~lL~~~~~~ 453 (767)
. ....++. +...+.+.+..
T Consensus 305 ~~~~~~~~~~~~~~~~~l~~i~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (861)
T d2bpta1 305 AQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWR 384 (861)
T ss_dssp HHCTTCSCCCCCHHHHHHHHHHHHHHHHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHHTTCSSHH
T ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhcchhhhhhhcchhhhhhhhHHHH
Confidence 0 0001122 22233445666
Q ss_pred HHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCC--CCCccchhchHHHHHHHh
Q 004225 454 VREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKP--EPPFDQVRPALPALAQLV 531 (767)
Q Consensus 454 v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~--~~~~~~~~~~i~~L~~ll 531 (767)
.+..|..+++.++.........-.-...++.+++.+ .++++.++..++++++.++...+ ..........++.+....
T Consensus 385 ~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l-~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~ll~~l~~~~ 463 (861)
T d2bpta1 385 NREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLM-NDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGL 463 (861)
T ss_dssp HHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGG-GCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHh-cCcchhhhhHHHHHHHHHHHHhchhhhhHHhhhhhhHHHHhcc
Confidence 777777777777754433221111223667777878 78899999999999999876531 112223334445454444
Q ss_pred cCCCHHHHHHHHHHHHhhccC----ChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCccee-eh--
Q 004225 532 HSNDNDVLRYACEALSCLSDG----TNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQ-CT-- 604 (767)
Q Consensus 532 ~~~~~~v~~~a~~~L~~l~~~----~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~-~l-- 604 (767)
..++.+...+++++..++.. ......... ...+..++......+....++..+..++..++........ .+
T Consensus 464 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~i~~~~~~~~~~~~~ 541 (861)
T d2bpta1 464 -QDHPKVATNCSWTIINLVEQLAEATPSPIYNFY-PALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSAS 541 (861)
T ss_dssp -TSCHHHHHHHHHHHHHHHHHHSSSSSCGGGGGH-HHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHCCGGGHHHHHH
T ss_pred -ccChHHHHHHHHHHHHHHHHhhhcccchhhHHH-hhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 44577888888887776532 111111000 1244555555554443225667777777777654432211 11
Q ss_pred -----------------------------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcC-CchhHHHHHH
Q 004225 605 -----------------------------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNA-EFFTKKEAAR 654 (767)
Q Consensus 605 -----------------------------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~-~~~v~~~a~~ 654 (767)
.++..++.++..+............ ..+++.+.+.+... +..++..+..
T Consensus 542 l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~v~~~~l~ 620 (861)
T d2bpta1 542 ISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVA-DMLMGLFFRLLEKKDSAFIEDDVFY 620 (861)
T ss_dssp HHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGH-HHHHHHHHHHHHSTTGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhHHhHHHHHHHHHHHHHHHHHhcchhhHHHHH-HHHHHHHhhhcccCCchhHHHHHHH
Confidence 1112222222222211111111000 12355556666544 4578888999
Q ss_pred HHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHH
Q 004225 655 AISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKK 734 (767)
Q Consensus 655 ~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 734 (767)
+++.++.....+...+ ++ .+++.+...+++.++.++..|+.++..++...+. ...+|...+ ++.
T Consensus 621 ~l~~l~~~~~~~~~~~-l~-~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~---------~~~~~~~~i-----~~~ 684 (861)
T d2bpta1 621 AISALAASLGKGFEKY-LE-TFSPYLLKALNQVDSPVSITAVGFIADISNSLEE---------DFRRYSDAM-----MNV 684 (861)
T ss_dssp HHHHHHHHHGGGGHHH-HH-HHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGG---------GGHHHHHHH-----HHH
T ss_pred HHHHHHHHhhHHHHHH-HH-HHhhHHHHHhCCCCHHHHHHHHHHHHHHHHHhHH---------HhHhhHHHH-----HHH
Confidence 9988876422222222 22 3788888999999999999999999999876443 223344433 555
Q ss_pred HHHHhcCC--ChHHHHHHHHHHHHh
Q 004225 735 IEDLKRHD--SNGICEKAVKILEIY 757 (767)
Q Consensus 735 l~~l~~~~--~~~v~~~a~~~l~~~ 757 (767)
+.+.+.++ +.+++..+..++..+
T Consensus 685 L~~~l~~~~~~~~~k~~~~~~l~~i 709 (861)
T d2bpta1 685 LAQMISNPNARRELKPAVLSVFGDI 709 (861)
T ss_dssp HHHHHHCTTCCTTHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 66665543 467888787777654
No 48
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.66 E-value=5.9e-07 Score=85.26 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=32.6
Q ss_pred ccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhc
Q 004225 200 NNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIV 267 (767)
Q Consensus 200 ~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~ 267 (767)
..++.|++.+. .+..+.......++++++...++..++.++... +.++++|++|++++++ ++.++
T Consensus 153 ~~l~~L~l~~n-~l~~i~~~~~~~~~l~~~~~l~~n~l~~l~~~~-f~~l~~L~~L~Ls~N~-l~~l~ 217 (242)
T d1xwdc1 153 FESVILWLNKN-GIQEIHNCAFNGTQLDELNLSDNNNLEELPNDV-FHGASGPVILDISRTR-IHSLP 217 (242)
T ss_dssp SSCEEEECCSS-CCCEECTTTTTTCCEEEEECTTCTTCCCCCTTT-TTTSCCCSEEECTTSC-CCCCC
T ss_pred ccceeeecccc-cccccccccccchhhhccccccccccccccHHH-hcCCCCCCEEECCCCc-CCccC
Confidence 34555666442 333333333344555555555555566554322 3456666666666544 44443
No 49
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.63 E-value=1.8e-06 Score=93.42 Aligned_cols=315 Identities=13% Similarity=0.082 Sum_probs=197.2
Q ss_pred chHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHh
Q 004225 399 VVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLS 478 (767)
Q Consensus 399 ~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~ 478 (767)
+....++++.+++ ...++.+--++..++.++.+... -+++.+.+-|.++++.++..|+.+++++.. ++....+
T Consensus 67 ~~~~vi~l~ss~~-~~~Kr~gYL~l~~~~~~~~el~~--L~iNtl~KDL~s~n~~ir~lALr~L~~i~~--~~i~~~l-- 139 (584)
T d2vgla_ 67 GHMEAVNLLSSNR-YTEKQIGYLFISVLVNSNSELIR--LINNAIKNDLASRNPTFMGLALHCIANVGS--REMAEAF-- 139 (584)
T ss_dssp CHHHHHHGGGCSC-HHHHHHHHHHHHHSCCCCHHHHH--HHHHHHHHHHHSCCHHHHHHHHHHHHHHCC--HHHHHHH--
T ss_pred hHHHHHHHhCCCC-HHHHHHHHHHHHHHcCCCchHHH--HHHHHHHHHcCCCCHHHHHHHHHHHHcCCC--HHHHHHH--
Confidence 3466788899988 88888888888887773333322 146778888889999999999999999974 4443333
Q ss_pred cCCHHHHHHHHc-cCCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHH
Q 004225 479 EKALIPLLAQLN-KHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKI 557 (767)
Q Consensus 479 ~g~i~~L~~ll~-~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~ 557 (767)
.+.+.+.+. .+.++.+|+.|++++..+....|. .......++.+..++.+.++.++.+++.++..++...++..
T Consensus 140 ---~~~V~k~l~~~d~~p~VRk~A~l~l~ki~~~~pd--~~~~~~~~~~L~~lL~D~d~~V~~aAl~ll~eI~~~~p~~~ 214 (584)
T d2vgla_ 140 ---AGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPD--LVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEF 214 (584)
T ss_dssp ---TTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGG--GCCCCSCHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred ---HHHHHHhhccCCCcHHHHHHHHHHHHHHHHhChh--hhhhhhHHHHHHHHhcCCChhHHHHHHHHHHHHHHhCHHHH
Confidence 344555442 467789999999999999876533 23344678999999999999999999999999987665443
Q ss_pred HHHHhcCcHHHHHHHhcCCCCC-C----------cccchHHHHHhhhhccCCccee-eh---------------------
Q 004225 558 QAVIEADVCPRLVKLLLHPLPF-P----------FGLTPPLWTVRYIVKGDGFLTQ-CT--------------------- 604 (767)
Q Consensus 558 ~~~~~~~~~~~L~~lL~~~~~~-~----------~v~~~a~~~L~~l~~~~~~~~~-~l--------------------- 604 (767)
..... ..++.+..++.+.... . -.+...+..+..+....+.... .+
T Consensus 215 ~~~~~-~~i~~L~~ll~~~~~~~~~~~~~~~~~~~lq~~il~ll~~l~~~~~~~~~~~l~~~l~~Il~~~~~~~~~~~~~ 293 (584)
T d2vgla_ 215 KTSVS-LAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQ 293 (584)
T ss_dssp TTHHH-HHHHHHHHHHHCCSSSCSTTEETTEESHHHHHHHHHHGGGSSSCSSHHHHHHHHHHHHHHHHHHHSCCSCSSHH
T ss_pred HHHHH-HHHHHHHHHHhhcccchHHHHHhhcccHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHhhhccccccHH
Confidence 32221 2344444444433220 0 1122233333333322211000 00
Q ss_pred ------hhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCC-HHHHHHHHHcCCh
Q 004225 605 ------GIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGT-HEQIKYLVRKGCI 677 (767)
Q Consensus 605 ------~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~-~~~~~~l~~~~~i 677 (767)
.+..+++.++..+... +... ..+++.+..++.+.+++++..|..++..++.... +.. +.. ..
T Consensus 294 ~~~~~~aVl~e~i~~i~~~~~~-~~~~-----~~~i~~l~~lL~s~~~niry~aL~~L~~L~~~~~~~~~----~~~-~~ 362 (584)
T d2vgla_ 294 HSNAKNAVLFEAISLIIHHDSE-PNLL-----VRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEA----VKT-HI 362 (584)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC-HHHH-----HHHHHHHHHHSSCSCHHHHHHHHHHHHHHTTCTTTHHH----HHT-TH
T ss_pred hhhhHHHHHHHHHHHHHhcCCC-HHHH-----HHHHHHHHHHhcCCCcchHHHHHHHHHHHHccCCCHHH----HHH-HH
Confidence 2233344444333222 2211 1257788889999999999999999999987532 222 222 33
Q ss_pred HHHHhhh-cCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHH
Q 004225 678 KPLCDLL-LYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEI 756 (767)
Q Consensus 678 ~~L~~ll-~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~ 756 (767)
..++..+ .+++..++..++..|..++.... +.. .++.|...+.+.+++++..+...+..
T Consensus 363 ~~il~~l~~~~~~~Ir~~aL~lL~~L~n~~N--------------i~~------Iv~eL~~yl~~~d~~~k~~~i~~I~~ 422 (584)
T d2vgla_ 363 ETVINALKTERDVSVRQRAVDLLYAMCDRSN--------------AQQ------IVAEMLSYLETADYSIREEIVLKVAI 422 (584)
T ss_dssp HHHHHHHTTCCCHHHHHHHHHHHHHHCCHHH--------------HHH------HHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHhcccCchhHHHHHHHHHHHHhCCHHH--------------HHH------HHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 4444444 46788999999999999875321 111 24445555666677777766666554
Q ss_pred h
Q 004225 757 Y 757 (767)
Q Consensus 757 ~ 757 (767)
+
T Consensus 423 l 423 (584)
T d2vgla_ 423 L 423 (584)
T ss_dssp H
T ss_pred H
Confidence 3
No 50
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=2.9e-07 Score=80.77 Aligned_cols=130 Identities=14% Similarity=0.143 Sum_probs=87.0
Q ss_pred CCCCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccC
Q 004225 4 GIQNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCT 83 (767)
Q Consensus 4 ~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~ 83 (767)
++.+|++|+|+++. ++.++. .+..+++|++|+++++. ++++ +.+..+++|++|+++++. ++.++.
T Consensus 16 n~~~lr~L~L~~n~-I~~i~~--~~~~l~~L~~L~Ls~N~-i~~l----------~~~~~l~~L~~L~ls~N~-i~~l~~ 80 (162)
T d1a9na_ 16 NAVRDRELDLRGYK-IPVIEN--LGATLDQFDAIDFSDNE-IRKL----------DGFPLLRRLKTLLVNNNR-ICRIGE 80 (162)
T ss_dssp CTTSCEEEECTTSC-CCSCCC--GGGGTTCCSEEECCSSC-CCEE----------CCCCCCSSCCEEECCSSC-CCEECS
T ss_pred CcCcCcEEECCCCC-CCccCc--cccccccCCEEECCCCC-CCcc----------CCcccCcchhhhhccccc-ccCCCc
Confidence 35578999999975 666632 33578899999999984 7766 345668999999999975 666654
Q ss_pred CCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceee
Q 004225 84 GDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQ 161 (767)
Q Consensus 84 ~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 161 (767)
.. ...+++|++|++.+|.. ..+. .......+++|++|++.+|+.... +. .-...+..+++|+.|+
T Consensus 81 ~~--~~~l~~L~~L~L~~N~i-~~~~-~l~~l~~l~~L~~L~l~~N~i~~~-~~--------~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 81 GL--DQALPDLTELILTNNSL-VELG-DLDPLASLKSLTYLCILRNPVTNK-KH--------YRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CH--HHHCTTCCEEECCSCCC-CCGG-GGGGGGGCTTCCEEECCSSGGGGS-TT--------HHHHHHHHCTTCSEET
T ss_pred cc--cccccccccceeccccc-cccc-cccccccccccchhhcCCCccccc-cc--------hHHHHHHHCCCcCeeC
Confidence 32 24589999999998853 2221 111124689999999998864211 00 0012356677777665
No 51
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.43 E-value=1.3e-06 Score=99.83 Aligned_cols=309 Identities=14% Similarity=0.173 Sum_probs=192.2
Q ss_pred HHHHHhhhcCCC--HHHHHHHHHHHHHhc-CCChHHHH--hcCchHHHHhhccCCC-CHHHHHHHHHHHHHHHh--hh--
Q 004225 361 LPGMLAGVWSDD--SGLQLEATTWFRKLL-LPPSEKVI--QSGVVARFVEFLTRED-NPQLQLEAARALTNIAS--EN-- 430 (767)
Q Consensus 361 i~~l~~~l~s~~--~~~~~~a~~~L~~l~-~~~~~~i~--~~g~i~~L~~ll~~~~-~~~~~~~a~~~L~~l~~--~~-- 430 (767)
+|.+++.+.+++ ...+..++..+..++ .-....+. ...+++.+++.+.+++ +.+++..|..++.+... ..
T Consensus 130 i~~L~~~l~~~~~~~~~~~~~l~~l~~i~~~~~~~~~~~~~~~il~~i~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~ 209 (876)
T d1qgra_ 130 IPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANF 209 (876)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHHH
T ss_pred HHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcCcCccHHHHHHHHHHHHHHHHHhhhhh
Confidence 888888886544 567778888888887 22222221 2346777888776543 36889999999888876 11
Q ss_pred hHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcC
Q 004225 431 TNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQ 510 (767)
Q Consensus 431 ~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~ 510 (767)
.......-+++.+...+.+++++++..+..++..++...++.....+.......+.... .+.+.+++..++..+..++.
T Consensus 210 ~~~~~~~~i~~~l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~i~~ 288 (876)
T d1qgra_ 210 DKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAM-KSDIDEVALQGIEFWSNVCD 288 (876)
T ss_dssp TSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHH-TCSSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHH
Confidence 00111122456777788889999999999999999876665443333333444555555 67778888887776666653
Q ss_pred CC----------------C-CCCccch----hchHHHHHHHhcC-------CCHHHHHHHHHHHHhhccCChhHHHHHHh
Q 004225 511 GK----------------P-EPPFDQV----RPALPALAQLVHS-------NDNDVLRYACEALSCLSDGTNDKIQAVIE 562 (767)
Q Consensus 511 ~~----------------~-~~~~~~~----~~~i~~L~~ll~~-------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~ 562 (767)
.. + ....... ...++.+...+.. ++..++..+..++..++.......-.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~~~~--- 365 (876)
T d1qgra_ 289 EEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVP--- 365 (876)
T ss_dssp HHHHHHHHHHHHHHHSSCCSSCCCCHHHHHHHHHHHHHHHHTTCCCSSCCTTCCCHHHHHHHHHHHHHHHHGGGGHH---
T ss_pred HHHHHHHHhhHHHHhhhhHHHHHHHHHHHHHHHHHHhhHHHHHhcccccccccchHHHHHHHHHHHHHHHhhhhhhh---
Confidence 11 1 1111112 2344444444432 12447777777777766443222111
Q ss_pred cCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccC-CHHHHHHHHHcCCHHHHHHHH
Q 004225 563 ADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAG-NREQIQVVIDAGVIGPLVDLL 641 (767)
Q Consensus 563 ~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~-~~~~~~~~~~~~~i~~L~~ll 641 (767)
.+++.+.+.+.+.+. ..+..++.+++.+..+ ......... ..+++.+...+
T Consensus 366 -~~~~~i~~~l~~~~~--------------------------~~r~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~l 417 (876)
T d1qgra_ 366 -HVLPFIKEHIKNPDW--------------------------RYRDAAVMAFGCILEGPEPSQLKPLV-IQAMPTLIELM 417 (876)
T ss_dssp -HHHHHHHHHTTCSSH--------------------------HHHHHHHHHHHHTSSSSCHHHHHHHH-HHHHHHHHHHH
T ss_pred -hhHHHHHHhhccchH--------------------------HHHHHHHHHHHhhhhhhhHHHHHHHH-HHHHHHHHHhh
Confidence 245566666677766 6677777777777764 333333332 34788899999
Q ss_pred hcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcC----ChHHHHhhhcCCCHHHHHHHHHHHHHHHHhh
Q 004225 642 QNAEFFTKKEAARAISNAISGGTHEQIKYLVRKG----CIKPLCDLLLYADPEIVTICLKGLENILKVG 706 (767)
Q Consensus 642 ~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~----~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~ 706 (767)
.++++.++..|+++++.++...... ..... .++.+...+ +.++.++..+++++.++....
T Consensus 418 ~d~~~~vr~~a~~~l~~~~~~~~~~----~~~~~~~~~~~~~l~~~l-~~~~~v~~~~~~~l~~l~~~~ 481 (876)
T d1qgra_ 418 KDPSVVVRDTAAWTVGRICELLPEA----AINDVYLAPLLQCLIEGL-SAEPRVASNVCWAFSSLAEAA 481 (876)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHCGGG----TSSTTTHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHcchh----hhhHHHhhhHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987532111 01112 233444444 357889999999999998754
No 52
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.29 E-value=2.2e-05 Score=78.45 Aligned_cols=335 Identities=15% Similarity=0.120 Sum_probs=202.3
Q ss_pred HHHHHhhhc-CCCHHHHHHHHHHHHHhc--CCChHHHH----hcC--chHHHHhhccCCCCHHHHHHHHHHHHHHHh---
Q 004225 361 LPGMLAGVW-SDDSGLQLEATTWFRKLL--LPPSEKVI----QSG--VVARFVEFLTREDNPQLQLEAARALTNIAS--- 428 (767)
Q Consensus 361 i~~l~~~l~-s~~~~~~~~a~~~L~~l~--~~~~~~i~----~~g--~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~--- 428 (767)
+..++..+. ...+++....+..+-.+. .+....++ +.. .-..+...+..++ .-....+...+..++.
T Consensus 76 ~~~~l~lL~~~sk~d~vqyvL~Li~dLL~~d~~~~~~~~~~~~~~~~~~~~f~~~l~~~d-~~~~~~s~~i~~ll~~~~~ 154 (477)
T d1ho8a_ 76 LIPLIHLLSTSDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQEDPKQLEQLFDVSLKGDF-QTVLISGFNVVSLLVQNGL 154 (477)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHCTTHHHHHHHHCSCSSH-HHHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHhhcCcHHHHHHHHHHHHHHHhcCcchhHHHHHHhhCccchhHHHHHhccCch-hHHHHHHHHHHHHHHhccc
Confidence 455666665 455666666666666666 33222221 111 2234555566555 6677777777777776
Q ss_pred hhh---HHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHh--cCCHHHHHHHHcc------------
Q 004225 429 ENT---NVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLS--EKALIPLLAQLNK------------ 491 (767)
Q Consensus 429 ~~~---~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~--~g~i~~L~~ll~~------------ 491 (767)
... +.... ....+-.+....+...+.-|+.++..+... +.+|..+.. ...+.+++..++.
T Consensus 155 ~~~~~~e~l~~--~~~~l~~l~~~~~~~~~~i~v~~lq~llr~-~~~R~~fw~~~~~~~~~l~~il~~a~~~~~~~~~~~ 231 (477)
T d1ho8a_ 155 HNVKLVEKLLK--NNNLINILQNIEQMDTCYVCIRLLQELAVI-PEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVA 231 (477)
T ss_dssp CCHHHHHHHHH--CHHHHHHHHCTTCHHHHHHHHHHHHHHHTS-HHHHHHHHTTHHHHHHHHHHHHHHHHC---------
T ss_pred cccchHHHHHH--hhHHHHHhhcccccchHHHHHHHHHHHhcC-ccHHHHHHHcccchHHHHHHHHHHHhcccccchhhc
Confidence 111 22221 233344444668888888899999988855 668877643 3356777777741
Q ss_pred ----CCChHHHHHHHHHHHhhcCCCCCCCccchh--chHHHHHHHhc-CCCHHHHHHHHHHHHhhccCChh-----HHHH
Q 004225 492 ----HAKPSMLRNATKTLSRFCQGKPEPPFDQVR--PALPALAQLVH-SNDNDVLRYACEALSCLSDGTND-----KIQA 559 (767)
Q Consensus 492 ----~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~--~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~-----~~~~ 559 (767)
....+++..++.+++.++-+.+........ +.++.++.+++ ...+++.+-++.++.|++..... ....
T Consensus 232 ~~~~~~~~Ql~Y~~ll~lWlLSF~~~~~~~l~~~~~~~i~~l~~i~~~s~KEKvvRv~l~~l~Nll~~~~~~~~~~~~~~ 311 (477)
T d1ho8a_ 232 TNSNHLGIQLQYHSLLLIWLLTFNPVFANELVQKYLSDFLDLLKLVKITIKEKVSRLCISIILQCCSTRVKQHKKVIKQL 311 (477)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTSHHHHHHHHTTSHHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTSSSSTTHHHHHHHH
T ss_pred ccCCCccHHHHHHHHHHHHHHHcCHHHHHHHHHhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH
Confidence 123477889999999999765333333222 45888888886 56699999999999999865321 2233
Q ss_pred HHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccC-CcceeehhhhHHHHHHHhhhccCCHHHH-HHHHH-------
Q 004225 560 VIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGD-GFLTQCTGIAKEACRTISNITAGNREQI-QVVID------- 630 (767)
Q Consensus 560 ~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~-~~~~~~l~v~~~a~~~l~nl~~~~~~~~-~~~~~------- 630 (767)
++..++.+. +..|......++=....+..+....... ...+ ..-+.....-+.-..-+|.+. +.+..
T Consensus 312 ~v~~~~l~~-l~~L~~r~~~Dedl~edl~~L~~~L~~~~k~lT---sfd~Y~~Ev~Sg~L~WSP~H~se~FW~EN~~kf~ 387 (477)
T d1ho8a_ 312 LLLGNALPT-VQSLSERKYSDEELRQDISNLKEILENEYQELT---SFDEYVAELDSKLLCWSPPHVDNGFWSDNIDEFK 387 (477)
T ss_dssp HHHHCHHHH-HHHHHSSCCSSHHHHHHHHHHHHHHHHHHHTCC---HHHHHHHHHHHTCCCCCGGGGCHHHHHHHSGGGS
T ss_pred HHHcchhHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhcC---cHHHHHHHHhcCCCCCCCCcCChhHHHHHHHhhc
Confidence 444455554 4555544331121222222222221100 0000 222223333222223233322 11221
Q ss_pred ---cCCHHHHHHHHhc----------CCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHH
Q 004225 631 ---AGVIGPLVDLLQN----------AEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLK 697 (767)
Q Consensus 631 ---~~~i~~L~~ll~~----------~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~ 697 (767)
..++..|+++|+. .++.+...||.=++.++.. .|..+..+-+.|+=..+++++.++|++|+.+|+.
T Consensus 388 e~~~~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~-~P~gr~il~~lg~K~~vM~Lm~h~d~~Vr~eAL~ 466 (477)
T d1ho8a_ 388 KDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVEL-LPESIDVLDKTGGKADIMELLNHSDSRVKYEALK 466 (477)
T ss_dssp SGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHH-CTTHHHHHHHHSHHHHHHHHTSCSSHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHH-CcchhHHHHHcCcHHHHHHHhcCCCHHHHHHHHH
Confidence 1357889999972 3667888899999999997 5777777777899999999999999999999999
Q ss_pred HHHHHHH
Q 004225 698 GLENILK 704 (767)
Q Consensus 698 aL~~l~~ 704 (767)
|+..++.
T Consensus 467 avQklm~ 473 (477)
T d1ho8a_ 467 ATQAIIG 473 (477)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999885
No 53
>d1ho8a_ a.118.1.9 (A:) Regulatory subunit H of the V-type ATPase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.23 E-value=3.6e-05 Score=76.84 Aligned_cols=320 Identities=10% Similarity=0.077 Sum_probs=187.0
Q ss_pred chHHHHhhccCCCCHHHHHHHHHHHHHHHh--hhh----HHHHhCC--ChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCc
Q 004225 399 VVARFVEFLTREDNPQLQLEAARALTNIAS--ENT----NVVIDGG--AVPIFVKLLSSPSDDVREKAVWALGNIARSSP 470 (767)
Q Consensus 399 ~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~--~~~----~~~~~~~--~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~ 470 (767)
.+..+++++.....+++.......+..+.. ..+ +...+.. .-+.+...+..++.-+...+...+..++....
T Consensus 75 ~~~~~l~lL~~~sk~d~vqyvL~Li~dLL~~d~~~~~~~~~~~~~~~~~~~~f~~~l~~~d~~~~~~s~~i~~ll~~~~~ 154 (477)
T d1ho8a_ 75 TLIPLIHLLSTSDNEDCKKSVQNLIAELLSSDKYGDDTVKFFQEDPKQLEQLFDVSLKGDFQTVLISGFNVVSLLVQNGL 154 (477)
T ss_dssp THHHHHHHHHSCCCHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHCTTHHHHHHHHCSCSSHHHHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHHHHHhcCcchhHHHHHHhhCccchhHHHHHhccCchhHHHHHHHHHHHHHHhccc
Confidence 477788888876657777777777777776 111 1122222 22445566666777777777778888876544
Q ss_pred hhHH---HHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCcc--chhchHHHHHHHhcC------------
Q 004225 471 RDRD---LVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFD--QVRPALPALAQLVHS------------ 533 (767)
Q Consensus 471 ~~~~---~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~--~~~~~i~~L~~ll~~------------ 533 (767)
.... .... ... +...+....+.+.+..|+.++..+.+.++.+... .....++.++..+..
T Consensus 155 ~~~~~~e~l~~--~~~-~l~~l~~~~~~~~~~i~v~~lq~llr~~~~R~~fw~~~~~~~~~l~~il~~a~~~~~~~~~~~ 231 (477)
T d1ho8a_ 155 HNVKLVEKLLK--NNN-LINILQNIEQMDTCYVCIRLLQELAVIPEYRDVIWLHEKKFMPTLFKILQRATDSQLATRIVA 231 (477)
T ss_dssp CCHHHHHHHHH--CHH-HHHHHHCTTCHHHHHHHHHHHHHHHTSHHHHHHHHTTHHHHHHHHHHHHHHHHC---------
T ss_pred cccchHHHHHH--hhH-HHHHhhcccccchHHHHHHHHHHHhcCccHHHHHHHcccchHHHHHHHHHHHhcccccchhhc
Confidence 3322 1111 222 2333336778888888999999888876554433 223345555555531
Q ss_pred -----CCHHHHHHHHHHHHhhccCChhHHHHHHhc--CcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhh
Q 004225 534 -----NDNDVLRYACEALSCLSDGTNDKIQAVIEA--DVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGI 606 (767)
Q Consensus 534 -----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~--~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v 606 (767)
...+++..++.++.-++... +....+.+. +.++.++.+++.... +.+.+-++.++.|+.........
T Consensus 232 ~~~~~~~~Ql~Y~~ll~lWlLSF~~-~~~~~l~~~~~~~i~~l~~i~~~s~K-EKvvRv~l~~l~Nll~~~~~~~~---- 305 (477)
T d1ho8a_ 232 TNSNHLGIQLQYHSLLLIWLLTFNP-VFANELVQKYLSDFLDLLKLVKITIK-EKVSRLCISIILQCCSTRVKQHK---- 305 (477)
T ss_dssp ----CCHHHHHHHHHHHHHHHTTSH-HHHHHHHTTSHHHHHHHHHHHHHCCS-HHHHHHHHHHHHHTTSSSSTTHH----
T ss_pred ccCCCccHHHHHHHHHHHHHHHcCH-HHHHHHHHhhhHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHhhhhhhhhh----
Confidence 12578899999999998754 444445443 347788888865443 24444444455555432221100
Q ss_pred hHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcC---CchhHHHHHHHHHHhh----------------------c
Q 004225 607 AKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNA---EFFTKKEAARAISNAI----------------------S 661 (767)
Q Consensus 607 ~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~---~~~v~~~a~~~L~nl~----------------------~ 661 (767)
......++..++++ ++..|+.. ++++....- .|.... .
T Consensus 306 ---------------~~~~~~~v~~~~l~-~l~~L~~r~~~Dedl~edl~-~L~~~L~~~~k~lTsfd~Y~~Ev~Sg~L~ 368 (477)
T d1ho8a_ 306 ---------------KVIKQLLLLGNALP-TVQSLSERKYSDEELRQDIS-NLKEILENEYQELTSFDEYVAELDSKLLC 368 (477)
T ss_dssp ---------------HHHHHHHHHHCHHH-HHHHHHSSCCSSHHHHHHHH-HHHHHHHHHHHTCCHHHHHHHHHHHTCCC
T ss_pred ---------------hHHHHHHHHcchhH-HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhcCcHHHHHHHHhcCCCC
Confidence 11112233333333 33334332 233222211 111111 1
Q ss_pred CCCHHHH-HHHHH----------cCChHHHHhhhc----------CCCHHHHHHHHHHHHHHHHhhhhhhccCCcccccc
Q 004225 662 GGTHEQI-KYLVR----------KGCIKPLCDLLL----------YADPEIVTICLKGLENILKVGEAEMNTGTANRYFN 720 (767)
Q Consensus 662 ~~~~~~~-~~l~~----------~~~i~~L~~ll~----------~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~ 720 (767)
. +|-+. ..+.. ..+++.|+++++ +.|+.+...|+.=|+.+++..+.
T Consensus 369 W-SP~H~se~FW~EN~~kf~e~~~~llk~L~~lL~~~~~~~~~~~s~D~~~lAVAc~DiGefvr~~P~------------ 435 (477)
T d1ho8a_ 369 W-SPPHVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVELLPE------------ 435 (477)
T ss_dssp C-CGGGGCHHHHHHHSGGGSSGGGHHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHHHHHCTT------------
T ss_pred C-CCCcCChhHHHHHHHhhcccchHHHHHHHHHHhhcccccccccCCCcceeehhhhhHHHHHHHCcc------------
Confidence 1 12221 11221 135778888885 34777888899999999986443
Q ss_pred HHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHhc
Q 004225 721 HYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIYW 758 (767)
Q Consensus 721 ~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~~ 758 (767)
-+..+++.|+-+.+.+++.|+|++|+..|..++.++.
T Consensus 436 -gr~il~~lg~K~~vM~Lm~h~d~~Vr~eAL~avQklm 472 (477)
T d1ho8a_ 436 -SIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAII 472 (477)
T ss_dssp -HHHHHHHHSHHHHHHHHTSCSSHHHHHHHHHHHHHHH
T ss_pred -hhHHHHHcCcHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 3678889999999999999999999999999998764
No 54
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.15 E-value=1.6e-06 Score=75.81 Aligned_cols=38 Identities=11% Similarity=0.186 Sum_probs=16.8
Q ss_pred CcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccc
Q 004225 221 TSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSC 260 (767)
Q Consensus 221 ~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c 260 (767)
..+++|++|++++|. ++.++.. .+..+++|++|++.++
T Consensus 60 ~~l~~L~~L~ls~N~-i~~l~~~-~~~~l~~L~~L~L~~N 97 (162)
T d1a9na_ 60 PLLRRLKTLLVNNNR-ICRIGEG-LDQALPDLTELILTNN 97 (162)
T ss_dssp CCCSSCCEEECCSSC-CCEECSC-HHHHCTTCCEEECCSC
T ss_pred ccCcchhhhhccccc-ccCCCcc-ccccccccccceeccc
Confidence 344455555555443 3333222 1234555555555544
No 55
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.12 E-value=3e-07 Score=75.03 Aligned_cols=89 Identities=24% Similarity=0.233 Sum_probs=73.1
Q ss_pred CHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhcc
Q 004225 633 VIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNT 712 (767)
Q Consensus 633 ~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~ 712 (767)
.++.|+..+.++++.+|..|+++|+++.. +. .++.|..+++++++.|+..|+++|..+-.
T Consensus 23 ~~~~L~~~l~d~~~~vR~~a~~~L~~~~~---~~---------~~~~L~~~l~d~~~~VR~~a~~aL~~i~~-------- 82 (111)
T d1te4a_ 23 AFEPLLESLSNEDWRIRGAAAWIIGNFQD---ER---------AVEPLIKLLEDDSGFVRSGAARSLEQIGG-------- 82 (111)
T ss_dssp THHHHHHGGGCSCHHHHHHHHHHHGGGCS---HH---------HHHHHHHHHHHCCTHHHHHHHHHHHHHCS--------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcch---hh---------hHHHHHhhhccchhHHHHHHHHHHHHhCc--------
Confidence 57788899999999999999999987653 22 46778889999999999999999987631
Q ss_pred CCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHh
Q 004225 713 GTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIY 757 (767)
Q Consensus 713 ~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~ 757 (767)
.+..+.|..+++++++.|+..|...|+++
T Consensus 83 ----------------~~~~~~L~~ll~d~~~~vr~~A~~aL~th 111 (111)
T d1te4a_ 83 ----------------ERVRAAMEKLAETGTGFARKVAVNYLETH 111 (111)
T ss_dssp ----------------HHHHHHHHHHTTSCCTHHHHHHHHHGGGC
T ss_pred ----------------cchHHHHHHHHcCCCHHHHHHHHHHHHcc
Confidence 12356678889999999999999998763
No 56
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.10 E-value=7e-06 Score=74.26 Aligned_cols=87 Identities=13% Similarity=0.229 Sum_probs=43.4
Q ss_pred CCCccceeecccccccccccCCCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCcccccccccCCCcc
Q 004225 63 MFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHVVTNKYHLGDER 142 (767)
Q Consensus 63 ~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 142 (767)
.+++|++|++.+.. +..++... ...+++|++|+++++ ++....+..|. .+++|++|+++++....- +
T Consensus 52 ~l~~L~~L~L~~N~-i~~~~~~~--~~~~~~L~~L~Ls~N-~l~~l~~~~F~--~l~~L~~L~L~~N~l~~i-~------ 118 (192)
T d1w8aa_ 52 RLPHLVKLELKRNQ-LTGIEPNA--FEGASHIQELQLGEN-KIKEISNKMFL--GLHQLKTLNLYDNQISCV-M------ 118 (192)
T ss_dssp GCTTCCEEECCSSC-CCCBCTTT--TTTCTTCCEEECCSC-CCCEECSSSST--TCTTCCEEECCSSCCCEE-C------
T ss_pred CCceEeeeeccccc-cccccccc--cccccccceeeeccc-cccccCHHHHh--CCCcccccccCCcccccc-C------
Confidence 35666666665543 33333322 334566666666655 33344333342 566666666666543221 1
Q ss_pred hhcchhhHhhhccccceeeecCCCC
Q 004225 143 TILSLGDFLQRLHTMKVLQIGGYSA 167 (767)
Q Consensus 143 ~~~~~~~~~~~l~~L~~L~l~~~~~ 167 (767)
.+.+..+++|+.+.+.+.+.
T Consensus 119 -----~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 119 -----PGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp -----TTSSTTCTTCCEEECTTCCB
T ss_pred -----HHHhcCCccccccccccccc
Confidence 01244556666666665544
No 57
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=98.09 E-value=1.9e-07 Score=76.29 Aligned_cols=104 Identities=20% Similarity=0.307 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccC
Q 004225 413 PQLQLEAARALTNIASENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKH 492 (767)
Q Consensus 413 ~~~~~~a~~~L~~l~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~ 492 (767)
+.+|..|+++|..+. ...++.|+..|.++++.+|..|+++|+++.. .++++.+...+ .+
T Consensus 6 ~~VR~~A~~aL~~~~---------~~~~~~L~~~l~d~~~~vR~~a~~~L~~~~~-----------~~~~~~L~~~l-~d 64 (111)
T d1te4a_ 6 KWVRRDVSTALSRMG---------DEAFEPLLESLSNEDWRIRGAAAWIIGNFQD-----------ERAVEPLIKLL-ED 64 (111)
T ss_dssp CCSSSSCCSSTTSCS---------STTHHHHHHGGGCSCHHHHHHHHHHHGGGCS-----------HHHHHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHhC---------HHHHHHHHHHHcCCCHHHHHHHHHHHHhcch-----------hhhHHHHHhhh-cc
Confidence 556666666555432 2467778888888888888888888876542 12467777888 67
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHH
Q 004225 493 AKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALS 547 (767)
Q Consensus 493 ~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~ 547 (767)
+++.++..++++|+.+.. ..+++.|..+++++++.++..|+.+|.
T Consensus 65 ~~~~VR~~a~~aL~~i~~----------~~~~~~L~~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 65 DSGFVRSGAARSLEQIGG----------ERVRAAMEKLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp CCTHHHHHHHHHHHHHCS----------HHHHHHHHHHTTSCCTHHHHHHHHHGG
T ss_pred chhHHHHHHHHHHHHhCc----------cchHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 788888888888887742 357788888888888888888877663
No 58
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.09 E-value=7.4e-06 Score=67.71 Aligned_cols=102 Identities=18% Similarity=0.216 Sum_probs=72.6
Q ss_pred cEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcc
Q 004225 9 TRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDI 88 (767)
Q Consensus 9 ~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~ 88 (767)
|.|+++++. ++.++. +..+++|++|+++++. ++++ ++.+..+++|+.|++++. .++.++. .
T Consensus 1 R~L~Ls~n~-l~~l~~---l~~l~~L~~L~ls~N~-l~~l---------p~~~~~l~~L~~L~l~~N-~i~~l~~----~ 61 (124)
T d1dcea3 1 RVLHLAHKD-LTVLCH---LEQLLLVTHLDLSHNR-LRAL---------PPALAALRCLEVLQASDN-ALENVDG----V 61 (124)
T ss_dssp SEEECTTSC-CSSCCC---GGGGTTCCEEECCSSC-CCCC---------CGGGGGCTTCCEEECCSS-CCCCCGG----G
T ss_pred CEEEcCCCC-CCCCcc---cccCCCCCEEECCCCc-cCcc---------hhhhhhhhcccccccccc-cccccCc----c
Confidence 578898864 666643 3688999999999874 6655 345667899999999985 4666653 4
Q ss_pred cCCCCccEEEeccCCcccccccccccccccCCCceeeeCCccc
Q 004225 89 LEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHV 131 (767)
Q Consensus 89 ~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~ 131 (767)
..+++|++|++.++..- ... .......+++|+.|++++++.
T Consensus 62 ~~l~~L~~L~l~~N~i~-~~~-~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 62 ANLPRLQELLLCNNRLQ-QSA-AIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp TTCSSCCEEECCSSCCC-SSS-TTGGGGGCTTCCEEECTTSGG
T ss_pred ccccccCeEECCCCccC-CCC-CchhhcCCCCCCEEECCCCcC
Confidence 57899999999887532 221 111124689999999998764
No 59
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.97 E-value=9.4e-07 Score=92.81 Aligned_cols=115 Identities=17% Similarity=0.303 Sum_probs=61.2
Q ss_pred CCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccc----
Q 004225 6 QNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSF---- 81 (767)
Q Consensus 6 ~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~---- 81 (767)
++|++|++++ .++........++.+++|++|++.+|. ++. .+.......+...++|++|+++++. +++.
T Consensus 2 ~~l~~ld~~~-~~i~~~~~~~l~~~l~~l~~L~L~~~~-i~~----~~~~~l~~~L~~~~~L~~LdLs~N~-i~~~~~~~ 74 (460)
T d1z7xw1 2 LDIQSLDIQC-EELSDARWAELLPLLQQCQVVRLDDCG-LTE----ARCKDISSALRVNPALAELNLRSNE-LGDVGVHC 74 (460)
T ss_dssp EEEEEEEEES-CCCCHHHHHHHHHHHTTCSEEEEESSC-CCH----HHHHHHHHHHHTCTTCCEEECTTCC-CHHHHHHH
T ss_pred CCCCEEEeeC-CcCChHHHHHHHHhCCCCCEEEeCCCC-CCH----HHHHHHHHHHhcCCCCCEEECcCCc-CChHHHHH
Confidence 3577888855 345443222234567778888888774 431 1112333444567778888887653 3321
Q ss_pred -cCCCCcccCCCCccEEEeccCCccccccccccc--ccccCCCceeeeCCcc
Q 004225 82 -CTGDLDILEFPSLKELRISKCPEFMVRTTSIFT--ERVFPNLEKLKVDAKH 130 (767)
Q Consensus 82 -~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~--~~~l~~L~~L~l~~~~ 130 (767)
... + ....++|++|++++|. +++.....++ ...+++|++|++.+|.
T Consensus 75 l~~~-l-~~~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~ 123 (460)
T d1z7xw1 75 VLQG-L-QTPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNL 123 (460)
T ss_dssp HHHT-T-CSTTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred HHHH-H-hcCCCCCCEEECCCCC-ccccccccccchhhcccccccccccccc
Confidence 110 0 0123468888888775 3332111111 1256778888877665
No 60
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.82 E-value=1.8e-05 Score=65.26 Aligned_cols=85 Identities=20% Similarity=0.284 Sum_probs=64.1
Q ss_pred CCCCCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeeccccccccccc
Q 004225 3 CGIQNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFC 82 (767)
Q Consensus 3 ~~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~ 82 (767)
..+++|++|+++++ .++.+|+ . +..+++|++|+++++. ++.+ +.+..+++|++|++.+. ++.+++
T Consensus 17 ~~l~~L~~L~ls~N-~l~~lp~-~-~~~l~~L~~L~l~~N~-i~~l----------~~~~~l~~L~~L~l~~N-~i~~~~ 81 (124)
T d1dcea3 17 EQLLLVTHLDLSHN-RLRALPP-A-LAALRCLEVLQASDNA-LENV----------DGVANLPRLQELLLCNN-RLQQSA 81 (124)
T ss_dssp GGGTTCCEEECCSS-CCCCCCG-G-GGGCTTCCEEECCSSC-CCCC----------GGGTTCSSCCEEECCSS-CCCSSS
T ss_pred ccCCCCCEEECCCC-ccCcchh-h-hhhhhccccccccccc-cccc----------CccccccccCeEECCCC-ccCCCC
Confidence 35789999999997 4777753 3 4679999999999974 6655 34667999999999986 355554
Q ss_pred CCCCcccCCCCccEEEeccCC
Q 004225 83 TGDLDILEFPSLKELRISKCP 103 (767)
Q Consensus 83 ~~~~~~~~~~~L~~L~l~~c~ 103 (767)
... ....+++|+.|++++.+
T Consensus 82 ~~~-~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 82 AIQ-PLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp TTG-GGGGCTTCCEEECTTSG
T ss_pred Cch-hhcCCCCCCEEECCCCc
Confidence 311 14678999999998865
No 61
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.69 E-value=7.5e-07 Score=81.05 Aligned_cols=82 Identities=15% Similarity=0.130 Sum_probs=37.7
Q ss_pred cCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccCCCCcccCCCCccEEEeccCCccccc
Q 004225 29 SSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCTGDLDILEFPSLKELRISKCPEFMVR 108 (767)
Q Consensus 29 ~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~ 108 (767)
..+++|++|+++++. ++.+ +.+..+++|++|+++++. +++++.. ...+++|+.|+++++. ++..
T Consensus 45 ~~L~~L~~L~Ls~n~-I~~i----------~~l~~l~~L~~L~Ls~N~-i~~i~~~---~~~~~~L~~L~l~~N~-i~~l 108 (198)
T d1m9la_ 45 STLKACKHLALSTNN-IEKI----------SSLSGMENLRILSLGRNL-IKKIENL---DAVADTLEELWISYNQ-IASL 108 (198)
T ss_dssp HHTTTCCEEECSEEE-ESCC----------CCHHHHTTCCEEECCEEE-ECSCSSH---HHHHHHCCEEECSEEE-CCCH
T ss_pred hcccccceeECcccC-CCCc----------ccccCCccccChhhcccc-ccccccc---cccccccccccccccc-cccc
Confidence 345566666665543 3333 123335566666665542 4433321 1223456666665542 2221
Q ss_pred ccccccccccCCCceeeeCCcc
Q 004225 109 TTSIFTERVFPNLEKLKVDAKH 130 (767)
Q Consensus 109 ~~~~~~~~~l~~L~~L~l~~~~ 130 (767)
. . + ..+++|+.|++++|.
T Consensus 109 ~-~-~--~~l~~L~~L~L~~N~ 126 (198)
T d1m9la_ 109 S-G-I--EKLVNLRVLYMSNNK 126 (198)
T ss_dssp H-H-H--HHHHHSSEEEESEEE
T ss_pred c-c-c--cccccccccccccch
Confidence 1 0 1 245566666666543
No 62
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.67 E-value=1.3e-05 Score=80.31 Aligned_cols=260 Identities=14% Similarity=0.089 Sum_probs=131.9
Q ss_pred cCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeeccccccc--ccc-cCC--CC--cccCCCCccEEEecc
Q 004225 29 SSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKF--TSF-CTG--DL--DILEFPSLKELRISK 101 (767)
Q Consensus 29 ~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l--~~~-~~~--~~--~~~~~~~L~~L~l~~ 101 (767)
....+|++|+++++. +.. ++...+...+...++|+.|++.++..- ... +.+ .+ ....+++|++|++++
T Consensus 28 ~~~~~l~~L~Ls~n~-i~~----~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNT-IGT----EAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp HHCSCCCEEECTTSE-ECH----HHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred hhCCCCCEEECcCCc-CCH----HHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 456778888888763 221 122334455666788899988865311 100 000 00 023468899999988
Q ss_pred CCcccccccccc-cccccCCCceeeeCCccccccccc-CCCcchhcchhhHhhhccccceeeecCCCCCCCcccccCCce
Q 004225 102 CPEFMVRTTSIF-TERVFPNLEKLKVDAKHVVTNKYH-LGDERTILSLGDFLQRLHTMKVLQIGGYSASLPYEKVENGMW 179 (767)
Q Consensus 102 c~~l~~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~ 179 (767)
|..-......+. .....++|++|++++|.....-.. +................+.|+.+.+.+......
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~--------- 173 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENG--------- 173 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGG---------
T ss_pred cccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccccc---------
Confidence 853221110000 012468899999987753111000 000000000111123455677777665431110
Q ss_pred eeeeecccccchhhccccccccccEEEecCCCccc-----cccCCCCcCCCCCEEEeccCccchhhcCc---hhhhcccc
Q 004225 180 VEIREAFHLEHILIRESSVTNNLVILRVKGCDHLV-----NLVPPSTSFQNLTNMVVSRCNNLKIVLTS---LIAKTLVR 251 (767)
Q Consensus 180 l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~~-----~~~~~~~~~~~L~~L~l~~c~~l~~~~~~---~~~~~l~~ 251 (767)
....+ .......++|++|++.++..-. .+......+++|+.|+++++. +++.... .....+++
T Consensus 174 -------~~~~l-~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~~~L~~~l~~~~~ 244 (344)
T d2ca6a1 174 -------SMKEW-AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSALAIALKSWPN 244 (344)
T ss_dssp -------GHHHH-HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHHHHHHHHGGGCTT
T ss_pred -------ccccc-cchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccc-cccccccccccccccccc
Confidence 01111 1112235678888887764221 112234567889999998775 3332111 12345788
Q ss_pred CcEEeEccccccch-----hccccccccccccccccccceEeecCCCCcccccC---CCcc-ccCCccceEeecCCC
Q 004225 252 LRYMKIKSCDRITE-----IVQGDDVVAKDEVITFRELKELKLVDLERLTSFCS---GNCA-FKFPSLERLVVDDCP 319 (767)
Q Consensus 252 L~~L~i~~c~~l~~-----~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~---~~~~-~~~~~L~~L~i~~c~ 319 (767)
|++|++++|. +.. +...... ...++|++|+++++. ++.-.. .... ..+++|++|++.++.
T Consensus 245 L~~L~Ls~n~-i~~~g~~~l~~~l~~------~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 245 LRELGLNDCL-LSARGAAAVVDAFSK------LENIGLQTLRLQYNE-IELDAVRTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp CCEEECTTCC-CCHHHHHHHHHHHHT------CSSCCCCEEECCSSC-CBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred chhhhhhcCc-cCchhhHHHHHHhhh------ccCCCCCEEECCCCc-CChHHHHHHHHHHHccCCCCCEEECCCCc
Confidence 9999998886 322 1111111 014789999998864 433211 0111 247889999997763
No 63
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.56 E-value=4e-06 Score=76.08 Aligned_cols=56 Identities=18% Similarity=0.192 Sum_probs=22.7
Q ss_pred ccccEEEecCCCccccccCCCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccc
Q 004225 200 NNLVILRVKGCDHLVNLVPPSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSC 260 (767)
Q Consensus 200 ~~L~~L~i~~~~~~~~~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c 260 (767)
++|++|+++++. +..+......+++|+.|+++++ .++.+.. +..+++|++|+++++
T Consensus 70 ~~L~~L~Ls~N~-i~~i~~~~~~~~~L~~L~l~~N-~i~~l~~---~~~l~~L~~L~L~~N 125 (198)
T d1m9la_ 70 ENLRILSLGRNL-IKKIENLDAVADTLEELWISYN-QIASLSG---IEKLVNLRVLYMSNN 125 (198)
T ss_dssp TTCCEEECCEEE-ECSCSSHHHHHHHCCEEECSEE-ECCCHHH---HHHHHHSSEEEESEE
T ss_pred ccccChhhcccc-cccccccccccccccccccccc-ccccccc---ccccccccccccccc
Confidence 455555554432 2222111122344555555444 2333311 233455555555543
No 64
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.45 E-value=0.00025 Score=63.52 Aligned_cols=85 Identities=16% Similarity=0.183 Sum_probs=37.6
Q ss_pred cCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhccccccccccccccccccceEeecCCCCcccccCC
Q 004225 222 SFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVITFRELKELKLVDLERLTSFCSG 301 (767)
Q Consensus 222 ~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~~ 301 (767)
.+++|+.|+++++... .++.. .+..+++|++|+++++. ++.++...... +++|+.|++++. +++.++.+
T Consensus 52 ~l~~L~~L~L~~N~i~-~~~~~-~~~~~~~L~~L~Ls~N~-l~~l~~~~F~~-------l~~L~~L~L~~N-~l~~i~~~ 120 (192)
T d1w8aa_ 52 RLPHLVKLELKRNQLT-GIEPN-AFEGASHIQELQLGENK-IKEISNKMFLG-------LHQLKTLNLYDN-QISCVMPG 120 (192)
T ss_dssp GCTTCCEEECCSSCCC-CBCTT-TTTTCTTCCEEECCSCC-CCEECSSSSTT-------CTTCCEEECCSS-CCCEECTT
T ss_pred CCceEeeeeccccccc-ccccc-ccccccccceeeecccc-ccccCHHHHhC-------CCcccccccCCc-cccccCHH
Confidence 4455555555544322 22121 13345555555555442 44443332110 455555555543 34444432
Q ss_pred CccccCCccceEeecCC
Q 004225 302 NCAFKFPSLERLVVDDC 318 (767)
Q Consensus 302 ~~~~~~~~L~~L~i~~c 318 (767)
....+++|++|++.+.
T Consensus 121 -~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 121 -SFEHLNSLTSLNLASN 136 (192)
T ss_dssp -SSTTCTTCCEEECTTC
T ss_pred -HhcCCccccccccccc
Confidence 1234555555555544
No 65
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.36 E-value=4.5e-05 Score=76.11 Aligned_cols=252 Identities=13% Similarity=0.144 Sum_probs=135.8
Q ss_pred CCCccEEeeecCCCcccccc---CccccCcCCCceeeeeccCCcceEEec--cchhhcccccCCCCccceeecccccccc
Q 004225 5 IQNLTRLTLSCCMNLRCLFS---SSTVSSFVQLQCIEIVGCPVLEELIVM--DNQEERKKNIVMFPQLQYLKMSDLEKFT 79 (767)
Q Consensus 5 l~~L~~L~l~~c~~l~~l~~---~~~~~~l~~L~~L~l~~~~~l~~~~~~--~~~~~~~~~~~~~~~L~~L~l~~~~~l~ 79 (767)
..+|+.|+|+++. +..-.. .......++|+.|+++++.. ...... .+...+...+...++|++|+++++. +.
T Consensus 30 ~~~l~~L~Ls~n~-i~~~~~~~l~~~l~~~~~L~~l~l~~~~~-~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~-i~ 106 (344)
T d2ca6a1 30 DDSVKEIVLSGNT-IGTEAARWLSENIASKKDLEIAEFSDIFT-GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA-FG 106 (344)
T ss_dssp CSCCCEEECTTSE-ECHHHHHHHHHTTTTCTTCCEEECCSCCT-TSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC-CC
T ss_pred CCCCCEEECcCCc-CCHHHHHHHHHHHHhCCCCCEEECCCCcc-cccccccchHHHHHHHHHhhCCCcccccccccc-cc
Confidence 5679999999873 321100 01235678999999987742 111000 0112223445567899999999874 22
Q ss_pred cccCCCC--cccCCCCccEEEeccCCcccccccc---cc-------cccccCCCceeeeCCcccccccccCCCcchhcch
Q 004225 80 SFCTGDL--DILEFPSLKELRISKCPEFMVRTTS---IF-------TERVFPNLEKLKVDAKHVVTNKYHLGDERTILSL 147 (767)
Q Consensus 80 ~~~~~~~--~~~~~~~L~~L~l~~c~~l~~~~~~---~~-------~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~ 147 (767)
......+ .....++|++|++++|..-...... .. .....+.|+.|.++++... ......+
T Consensus 107 ~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~--------~~~~~~l 178 (344)
T d2ca6a1 107 PTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLE--------NGSMKEW 178 (344)
T ss_dssp TTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCT--------GGGHHHH
T ss_pred cccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeeccccccc--------ccccccc
Confidence 2110000 0235789999999998632110000 00 0124688999998876531 1122345
Q ss_pred hhHhhhccccceeeecCCCCCCCcccccCCceeeeeecccccchhhccccccccccEEEecCCCcc----ccccCCCCcC
Q 004225 148 GDFLQRLHTMKVLQIGGYSASLPYEKVENGMWVEIREAFHLEHILIRESSVTNNLVILRVKGCDHL----VNLVPPSTSF 223 (767)
Q Consensus 148 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~i~~~~~l~~~~~~~~~~~~~L~~L~i~~~~~~----~~~~~~~~~~ 223 (767)
...+...++|+.|.+.++..... ....+........++|++|+++++..- ..+.......
T Consensus 179 ~~~l~~~~~L~~L~L~~n~i~~~----------------g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~ 242 (344)
T d2ca6a1 179 AKTFQSHRLLHTVKMVQNGIRPE----------------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 242 (344)
T ss_dssp HHHHHHCTTCCEEECCSSCCCHH----------------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred cchhhhhhhhccccccccccccc----------------ccccchhhhhcchhhhccccccccccccccccccccccccc
Confidence 55677788999999887652111 011111122334577888888765421 1122224557
Q ss_pred CCCCEEEeccCccchhhcCchhhh-----ccccCcEEeEccccccch-----hccccccccccccccccccceEeecCC
Q 004225 224 QNLTNMVVSRCNNLKIVLTSLIAK-----TLVRLRYMKIKSCDRITE-----IVQGDDVVAKDEVITFRELKELKLVDL 292 (767)
Q Consensus 224 ~~L~~L~l~~c~~l~~~~~~~~~~-----~l~~L~~L~i~~c~~l~~-----~~~~~~~~~~~~~~~~~~L~~L~l~~~ 292 (767)
++|++|+|++|. +++.....++. ..++|++|+++++. +.. +...... .+++|+.|++++.
T Consensus 243 ~~L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~-i~~~~~~~l~~~l~~-------~~~~L~~L~l~~N 312 (344)
T d2ca6a1 243 PNLRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNE-IELDAVRTLKTVIDE-------KMPDLLFLELNGN 312 (344)
T ss_dssp TTCCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSC-CBHHHHHHHHHHHHH-------HCTTCCEEECTTS
T ss_pred ccchhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCc-CChHHHHHHHHHHHc-------cCCCCCEEECCCC
Confidence 888888888875 33332222221 23568888888765 332 1111110 1577888888764
No 66
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.16 E-value=0.00073 Score=57.84 Aligned_cols=88 Identities=19% Similarity=0.127 Sum_probs=46.5
Q ss_pred CCCcCCCCCEEEeccCccchhhcCchhhhccccCcEEeEccccccchhccccccccccccccccccceEeecCCCCcccc
Q 004225 219 PSTSFQNLTNMVVSRCNNLKIVLTSLIAKTLVRLRYMKIKSCDRITEIVQGDDVVAKDEVITFRELKELKLVDLERLTSF 298 (767)
Q Consensus 219 ~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~l~~L~~L~i~~c~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~ 298 (767)
....+++|++|+|.+.+.++.+.... +.++++|+.|+++++. ++.+...... .+++|++|++++. +++++
T Consensus 26 ~l~~l~~l~~L~l~~n~~l~~i~~~~-f~~l~~L~~L~Ls~N~-l~~i~~~~f~-------~l~~L~~L~Ls~N-~l~~l 95 (156)
T d2ifga3 26 HLPGAENLTELYIENQQHLQHLELRD-LRGLGELRNLTIVKSG-LRFVAPDAFH-------FTPRLSRLNLSFN-ALESL 95 (156)
T ss_dssp TSCSCSCCSEEECCSCSSCCEECGGG-SCSCCCCSEEECCSSC-CCEECTTGGG-------SCSCCCEEECCSS-CCSCC
T ss_pred cccCccccCeeecCCCccccccCchh-hccccccCcceeeccc-cCCccccccc-------ccccccceeccCC-CCccc
Confidence 34445666666666665566554332 3456666666666553 5555433211 1556666666653 35555
Q ss_pred cCCCccccCCccceEeecCC
Q 004225 299 CSGNCAFKFPSLERLVVDDC 318 (767)
Q Consensus 299 ~~~~~~~~~~~L~~L~i~~c 318 (767)
+.+ .+..++|++|++.+.
T Consensus 96 ~~~--~~~~~~l~~L~L~~N 113 (156)
T d2ifga3 96 SWK--TVQGLSLQELVLSGN 113 (156)
T ss_dssp CST--TTCSCCCCEEECCSS
T ss_pred Chh--hhccccccccccCCC
Confidence 543 223345666666554
No 67
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.13 E-value=0.00066 Score=58.15 Aligned_cols=110 Identities=12% Similarity=0.034 Sum_probs=75.4
Q ss_pred CCCCccEEeeecCCCccccccCccccCcCCCceeeeeccCCcceEEeccchhhcccccCCCCccceeecccccccccccC
Q 004225 4 GIQNLTRLTLSCCMNLRCLFSSSTVSSFVQLQCIEIVGCPVLEELIVMDNQEERKKNIVMFPQLQYLKMSDLEKFTSFCT 83 (767)
Q Consensus 4 ~l~~L~~L~l~~c~~l~~l~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~l~~~~~ 83 (767)
.+...+.++..+.. +...+ ..++.+++|++|++.+...++.+.. ..+..+++|+.|++++. +++.++.
T Consensus 6 ~c~~~~~l~c~~~~-~~~~p--~~l~~l~~l~~L~l~~n~~l~~i~~--------~~f~~l~~L~~L~Ls~N-~l~~i~~ 73 (156)
T d2ifga3 6 CPHGSSGLRCTRDG-ALDSL--HHLPGAENLTELYIENQQHLQHLEL--------RDLRGLGELRNLTIVKS-GLRFVAP 73 (156)
T ss_dssp CCSSSSCEECCSSC-CCTTT--TTSCSCSCCSEEECCSCSSCCEECG--------GGSCSCCCCSEEECCSS-CCCEECT
T ss_pred CcCCCCeEEecCCC-CccCc--ccccCccccCeeecCCCccccccCc--------hhhccccccCcceeecc-ccCCccc
Confidence 34456667766643 33332 2236788999999988777877621 34566899999999986 5777765
Q ss_pred CCCcccCCCCccEEEeccCCcccccccccccccccCCCceeeeCCccc
Q 004225 84 GDLDILEFPSLKELRISKCPEFMVRTTSIFTERVFPNLEKLKVDAKHV 131 (767)
Q Consensus 84 ~~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~~~l~~L~~L~l~~~~~ 131 (767)
.. ...+++|++|+++++. ++......+ ...+|++|++++++.
T Consensus 74 ~~--f~~l~~L~~L~Ls~N~-l~~l~~~~~---~~~~l~~L~L~~Np~ 115 (156)
T d2ifga3 74 DA--FHFTPRLSRLNLSFNA-LESLSWKTV---QGLSLQELVLSGNPL 115 (156)
T ss_dssp TG--GGSCSCCCEEECCSSC-CSCCCSTTT---CSCCCCEEECCSSCC
T ss_pred cc--ccccccccceeccCCC-CcccChhhh---ccccccccccCCCcc
Confidence 54 4568999999999865 444444444 235799999998764
No 68
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.12 E-value=6.7e-05 Score=78.08 Aligned_cols=183 Identities=14% Similarity=0.038 Sum_probs=100.5
Q ss_pred hHhhhccccceeeecCCCCCCC---------cccccCCceeeeeecccccchh---hccccccccccEEEecCCCccc--
Q 004225 149 DFLQRLHTMKVLQIGGYSASLP---------YEKVENGMWVEIREAFHLEHIL---IRESSVTNNLVILRVKGCDHLV-- 214 (767)
Q Consensus 149 ~~~~~l~~L~~L~l~~~~~~~~---------~~~~~~l~~l~i~~~~~l~~~~---~~~~~~~~~L~~L~i~~~~~~~-- 214 (767)
..+...+.++.+.+.++..... ......++.+.+.++.--.... .......+.++.++++++..-.
T Consensus 220 ~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~ 299 (460)
T d1z7xw1 220 GIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG 299 (460)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH
T ss_pred ccccccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3455667788888877643111 1123467777777764322111 1122346788999987754321
Q ss_pred --cccCC-CCcCCCCCEEEeccCccchhhcC--chhhhccccCcEEeEccccccch-----hcccccccccccccccccc
Q 004225 215 --NLVPP-STSFQNLTNMVVSRCNNLKIVLT--SLIAKTLVRLRYMKIKSCDRITE-----IVQGDDVVAKDEVITFREL 284 (767)
Q Consensus 215 --~~~~~-~~~~~~L~~L~l~~c~~l~~~~~--~~~~~~l~~L~~L~i~~c~~l~~-----~~~~~~~~~~~~~~~~~~L 284 (767)
.+... ....+.|+.+.+++|..-..... ..+....++|++|++++++ +.. +...... ..+.|
T Consensus 300 ~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~-i~~~g~~~l~~~l~~-------~~~~L 371 (460)
T d1z7xw1 300 ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNR-LEDAGVRELCQGLGQ-------PGSVL 371 (460)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSB-CHHHHHHHHHHHHTS-------TTCCC
T ss_pred cchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeec-ccCcccchhhhhhhc-------ccCCC
Confidence 11100 12346799999998854322211 1123456789999999875 432 2111110 14679
Q ss_pred ceEeecCCCCcccccCC---CccccCCccceEeecCCCCcc-----cccccCC-CCcccchhhccc
Q 004225 285 KELKLVDLERLTSFCSG---NCAFKFPSLERLVVDDCPDMK-----IFSEGKL-STPKLHKVERHG 341 (767)
Q Consensus 285 ~~L~l~~~~~l~~~~~~---~~~~~~~~L~~L~i~~c~~l~-----~~~~~~~-~~~~L~~l~i~~ 341 (767)
++|++++| +++..... .....+++|++|+++++ .++ .+..... +...|+.+++.+
T Consensus 372 ~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~L~Ls~N-~i~~~g~~~l~~~l~~~~~~L~~l~l~~ 435 (460)
T d1z7xw1 372 RVLWLADC-DVSDSSCSSLAATLLANHSLRELDLSNN-CLGDAGILQLVESVRQPGCLLEQLVLYD 435 (460)
T ss_dssp CEEECTTS-CCCHHHHHHHHHHHHHCCCCCEEECCSS-SCCHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred CEEECCCC-CCChHHHHHHHHHHhcCCCCCEEECCCC-cCCHHHHHHHHHHHHhCCCccCEEECCC
Confidence 99999998 56553211 11235799999999987 443 1221111 223577777765
No 69
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.73 E-value=0.17 Score=46.78 Aligned_cols=198 Identities=11% Similarity=0.088 Sum_probs=141.5
Q ss_pred hchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChh----HHHHHHh-cCcHHHHHHHhcCCCCCCcccchHHHHHhhhhc
Q 004225 521 RPALPALAQLVHSNDNDVLRYACEALSCLSDGTND----KIQAVIE-ADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVK 595 (767)
Q Consensus 521 ~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~----~~~~~~~-~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~ 595 (767)
.+.+..++..+..-+.+.++++..++.++.+...+ ..+.+.. .+++..|+..-.+++. ..
T Consensus 68 ~d~l~~Li~~L~~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gye~~ei----Al----------- 132 (330)
T d1upka_ 68 SGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESPEI----AL----------- 132 (330)
T ss_dssp HSHHHHHHHTGGGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGSTTT----HH-----------
T ss_pred hChHHHHHHhCCCCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhcCCcch----hh-----------
Confidence 45788888888899999999999999999876432 2233332 2334444444333322 11
Q ss_pred cCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHc-
Q 004225 596 GDGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRK- 674 (767)
Q Consensus 596 ~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~- 674 (767)
.++.+-.-+...+...+.++...-+..++++++.+++++...|..++..+.... +......+..
T Consensus 133 --------------~~G~mLREcik~e~lak~iL~s~~f~~fF~yv~~~~FdiasDAf~TfkelLt~h-k~~~aefl~~N 197 (330)
T d1upka_ 133 --------------NCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKDLLTRH-KLLSAEFLEQH 197 (330)
T ss_dssp --------------HHHHHHHHHHTSHHHHHHHHHSGGGGHHHHHTTCSSHHHHHHHHHHHHHHHHSS-HHHHHHHHHHT
T ss_pred --------------hhhHHHHHHHhhHHHHHHHHccHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhC-HHHHHHHHHHh
Confidence 222233333344667778888888999999999999999999999999998874 5544444443
Q ss_pred --CChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHHHHH
Q 004225 675 --GCIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEKAVK 752 (767)
Q Consensus 675 --~~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~ 752 (767)
.++..+..++.+++.-++.+++..|..++....+.. ...+.+....-+..+..++.+++..++-.|-+
T Consensus 198 yd~Ff~~~~~LL~s~NYVtrRqSlKLLgelLldr~N~~----------vm~~Yvs~~~nLkl~M~LLrd~sk~Iq~EAFh 267 (330)
T d1upka_ 198 YDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT----------IMTKYISKPENLKLMMNLLRDKSRNIQFEAFH 267 (330)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHH----------HHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhhHHH----------HHHHHhCCHHHHHHHHHHhcCchhhHHHHhhh
Confidence 467778889999999999999999999997655433 23445555666888889999999999988888
Q ss_pred HHHHhc
Q 004225 753 ILEIYW 758 (767)
Q Consensus 753 ~l~~~~ 758 (767)
+..-|-
T Consensus 268 VFKvFV 273 (330)
T d1upka_ 268 VFKVFV 273 (330)
T ss_dssp HHHHHH
T ss_pred Hhhhhh
Confidence 876553
No 70
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.32 E-value=0.15 Score=57.25 Aligned_cols=105 Identities=12% Similarity=0.045 Sum_probs=71.9
Q ss_pred CHHHHHhhhcCC--CHHHHHHHHHHHHHhc--CC-------ChHHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh
Q 004225 360 SLPGMLAGVWSD--DSGLQLEATTWFRKLL--LP-------PSEKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIAS 428 (767)
Q Consensus 360 ~i~~l~~~l~s~--~~~~~~~a~~~L~~l~--~~-------~~~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~ 428 (767)
-...++..+.+. +..+|..|+-.|++.. .+ ....-.+..+-..++..+.+++ ..++...+.++..++.
T Consensus 36 f~~~L~~i~~~~~~~~~iR~~A~i~lKn~i~~~W~~~~~~~~i~~e~k~~Ik~~ll~~l~~~~-~~ir~~l~~~i~~I~~ 114 (959)
T d1wa5c_ 36 FGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLP-NNLQVQIGEAISSIAD 114 (959)
T ss_dssp HHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSSSCBSSCHHHHHHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHH
Confidence 344556666543 4678889999998877 11 0111112223345555555566 7899999999999998
Q ss_pred -hhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhc
Q 004225 429 -ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIAR 467 (767)
Q Consensus 429 -~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~ 467 (767)
+..+. -.+.++.+++.+.++++..+..++.++..++.
T Consensus 115 ~d~p~~--Wp~ll~~l~~~l~s~~~~~~~~~L~~l~~i~k 152 (959)
T d1wa5c_ 115 SDFPDR--WPTLLSDLASRLSNDDMVTNKGVLTVAHSIFK 152 (959)
T ss_dssp HHSTTT--CTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHG
T ss_pred HhCccc--cHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 44322 24688999999999998888999999998874
No 71
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.30 E-value=0.21 Score=46.02 Aligned_cols=226 Identities=8% Similarity=0.058 Sum_probs=149.5
Q ss_pred HHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccc------hhchHHHHHHHhcCCCHHHHHHHHHHHHhh
Q 004225 476 VLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQ------VRPALPALAQLVHSNDNDVLRYACEALSCL 549 (767)
Q Consensus 476 ~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~------~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l 549 (767)
+...+.+..++..| ..-+-+.|+.++.++.++.+.....+... ...++..|+....++ ++...+-..|...
T Consensus 65 ~~~~d~l~~Li~~L-~~L~fE~RKD~~~if~~llR~~~~~~~p~v~Yl~~~~eil~~L~~gye~~--eiAl~~G~mLREc 141 (330)
T d1upka_ 65 LYNSGLLSTLVADL-QLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFMLLKGYESP--EIALNCGIMLREC 141 (330)
T ss_dssp HHHHSHHHHHHHTG-GGSCHHHHHHHHHHHHHHHTCCBTTBCHHHHHHHTCTHHHHHHHHGGGST--TTHHHHHHHHHHH
T ss_pred HHHhChHHHHHHhC-CCCCCchhhhHHHHHHHHhhcCCCCCCccHHHHHcCHHHHHHHHhhcCCc--chhhhhhHHHHHH
Confidence 44566778888888 78889999999999999988763332221 134555555555444 4444444455554
Q ss_pred ccCChhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHH
Q 004225 550 SDGTNDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVI 629 (767)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~ 629 (767)
..+ +.....+...+.+..+.++++.++. ++...|..++.-+ ....+......+
T Consensus 142 ik~-e~lak~iL~s~~f~~fF~yv~~~~F--diasDAf~Tfkel------------------------Lt~hk~~~aefl 194 (330)
T d1upka_ 142 IRH-EPLAKIILWSEQFYDFFRYVEMSTF--DIASDAFATFKDL------------------------LTRHKLLSAEFL 194 (330)
T ss_dssp HTS-HHHHHHHHHSGGGGHHHHHTTCSSH--HHHHHHHHHHHHH------------------------HHSSHHHHHHHH
T ss_pred Hhh-HHHHHHHHccHHHHHHHHHHcCCch--HHHHHHHHHHHHH------------------------HHhCHHHHHHHH
Confidence 454 3455567777888889999999998 5555555555444 333334344444
Q ss_pred HcC---CHHHHHHHHhcCCchhHHHHHHHHHHhhcCC-CHHHH-HHHHHcCChHHHHhhhcCCCHHHHHHHHHHHHHHHH
Q 004225 630 DAG---VIGPLVDLLQNAEFFTKKEAARAISNAISGG-THEQI-KYLVRKGCIKPLCDLLLYADPEIVTICLKGLENILK 704 (767)
Q Consensus 630 ~~~---~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~-~~~~~-~~l~~~~~i~~L~~ll~~~~~~v~~~al~aL~~l~~ 704 (767)
..+ ++.....++.+++.-.|+.+...|+.+.... +...+ +++-+..-+..++.++++....++-.|-.+..-++.
T Consensus 195 ~~Nyd~Ff~~~~~LL~s~NYVtrRqSlKLLgelLldr~N~~vm~~Yvs~~~nLkl~M~LLrd~sk~Iq~EAFhVFKvFVA 274 (330)
T d1upka_ 195 EQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVA 274 (330)
T ss_dssp HHTHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHSGGGHHHHHHHTTCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHhcCchhhHHHHhhhHhhhhhc
Confidence 332 4666778999999999999999999998642 12222 233334568889999999999999999988877775
Q ss_pred hhhhhhccCCccccccHHHHHHHhh--chHHHHHHHhcC
Q 004225 705 VGEAEMNTGTANRYFNHYARLVEAA--EGFKKIEDLKRH 741 (767)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~l~~~--g~~~~l~~l~~~ 741 (767)
... .+.++..++... ..+.-+.++..+
T Consensus 275 Npn----------Kp~~I~~IL~~Nr~kLl~fl~~f~~d 303 (330)
T d1upka_ 275 NPN----------KTQPILDILLKNQAKLIEFLSKFQND 303 (330)
T ss_dssp CSS----------CCHHHHHHHHHTHHHHHHHHHHTTTT
T ss_pred CCC----------CCHHHHHHHHHhHHHHHHHHHhCCCC
Confidence 322 455677777533 445555555544
No 72
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=96.28 E-value=0.0006 Score=62.22 Aligned_cols=168 Identities=15% Similarity=0.134 Sum_probs=93.3
Q ss_pred hcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHH
Q 004225 396 QSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDL 475 (767)
Q Consensus 396 ~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~ 475 (767)
+.-.+..|..++++++ +.++..|+..| ..+.+..++.+++..|+..++..+ .
T Consensus 64 ~~a~~~~L~~Ll~D~d-~~VR~~AA~~L---------------p~~~L~~L~~D~d~~VR~~aa~~l---~--------- 115 (233)
T d1lrva_ 64 RYSPVEALTPLIRDSD-EVVRRAVAYRL---------------PREQLSALMFDEDREVRITVADRL---P--------- 115 (233)
T ss_dssp TTSCGGGGGGGTTCSS-HHHHHHHHTTS---------------CSGGGGGTTTCSCHHHHHHHHHHS---C---------
T ss_pred hcCCHHHHHHHhcCCC-HHHHHHHHHHc---------------CHHHHHHHhcCCChhHHHHHHhcc---C---------
Confidence 3445666666666666 67766665321 134556666666777766655432 1
Q ss_pred HHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChh
Q 004225 476 VLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTND 555 (767)
Q Consensus 476 ~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~ 555 (767)
.+.|..++ .+++..++..++..+ . .+.+..++++.+.+|+..++..+
T Consensus 116 ------~~~L~~Ll-~D~d~~VR~~aa~~~---~--------------~~~L~~L~~D~d~~VR~~aA~~~--------- 162 (233)
T d1lrva_ 116 ------LEQLEQMA-ADRDYLVRAYVVQRI---P--------------PGRLFRFMRDEDRQVRKLVAKRL--------- 162 (233)
T ss_dssp ------TGGGGGGT-TCSSHHHHHHHHHHS---C--------------GGGGGGTTTCSCHHHHHHHHHHS---------
T ss_pred ------HHHHHHHh-cCCCHHHHHHHHhcc---c--------------hhHHHHHhcCCCHHHHHHHHHhc---------
Confidence 12333444 666677766665431 1 12234455666666766554311
Q ss_pred HHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcCCHH
Q 004225 556 KIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAGVIG 635 (767)
Q Consensus 556 ~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i~ 635 (767)
..+.+..++++.++ .++..++..++ .+
T Consensus 163 ---------~~~~L~~l~~D~d~--------------------------~VR~~aa~~L~------------------~~ 189 (233)
T d1lrva_ 163 ---------PEESLGLMTQDPEP--------------------------EVRRIVASRLR------------------GD 189 (233)
T ss_dssp ---------CGGGGGGSTTCSSH--------------------------HHHHHHHHHCC------------------GG
T ss_pred ---------CHHHHHHHccCCCH--------------------------HHHHHHHHhcC------------------cH
Confidence 12345555666665 55555554432 24
Q ss_pred HHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcCCCHHHHHHHHH
Q 004225 636 PLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLYADPEIVTICLK 697 (767)
Q Consensus 636 ~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~al~ 697 (767)
.|..++.+.++.|+..++.. ....++..|.+++++|+..|..
T Consensus 190 ~L~~l~~D~d~~VR~aaae~--------------------~~~~ll~~L~D~d~~VR~aA~~ 231 (233)
T d1lrva_ 190 DLLELLHDPDWTVRLAAVEH--------------------ASLEALRELDEPDPEVRLAIAG 231 (233)
T ss_dssp GGGGGGGCSSHHHHHHHHHH--------------------SCHHHHHHCCCCCHHHHHHHHC
T ss_pred HHHHHHhCCCHHHHHHHHHh--------------------ccHHHHHHhCCCCHHHHHHHHH
Confidence 45666777777888776521 1233456677888888887754
No 73
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]}
Probab=95.12 E-value=0.0056 Score=55.58 Aligned_cols=28 Identities=4% Similarity=0.053 Sum_probs=20.5
Q ss_pred HhhcCHHHHHhhhcCCCHHHHHHHHHHH
Q 004225 356 QKLVSLPGMLAGVWSDDSGLQLEATTWF 383 (767)
Q Consensus 356 ~~~~~i~~l~~~l~s~~~~~~~~a~~~L 383 (767)
.+...+..|..++..+++.++..|+..|
T Consensus 63 a~~a~~~~L~~Ll~D~d~~VR~~AA~~L 90 (233)
T d1lrva_ 63 VRYSPVEALTPLIRDSDEVVRRAVAYRL 90 (233)
T ss_dssp HTTSCGGGGGGGTTCSSHHHHHHHHTTS
T ss_pred HhcCCHHHHHHHhcCCCHHHHHHHHHHc
Confidence 3334567778888888999998887654
No 74
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.40 E-value=0.25 Score=55.37 Aligned_cols=181 Identities=13% Similarity=0.174 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHh-hhhHHHHhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchh--------HHHHHh--cCC
Q 004225 413 PQLQLEAARALTNIAS-ENTNVVIDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRD--------RDLVLS--EKA 481 (767)
Q Consensus 413 ~~~~~~a~~~L~~l~~-~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~--------~~~~~~--~g~ 481 (767)
+.++..|+++++..+. ...... ..+++.++..|.+++..++..|++++..++...... .+.+.. ...
T Consensus 472 ~~lr~~~~~~i~~~~~~~~~~~~--~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~~~~~~~~~l~p~l~~l 549 (959)
T d1wa5c_ 472 IILRVDAIKYIYTFRNQLTKAQL--IELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEIL 549 (959)
T ss_dssp HHHHHHHHHHHHHTGGGSCHHHH--HHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCCBSSCGGGTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHhCCCchhHHHHHHHHHHHHHHhhcccccchhhccHHHHHhhHHHH
Confidence 7899999999999887 222222 246889999999999999999999999998532210 000000 013
Q ss_pred HHHHHHHHccCCChHH----HHHHHHHHHhhcCCCCCCCccchhchHHHHHHHhc-----CCCHHHHHHHHHHHHhhccC
Q 004225 482 LIPLLAQLNKHAKPSM----LRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVH-----SNDNDVLRYACEALSCLSDG 552 (767)
Q Consensus 482 i~~L~~ll~~~~~~~~----~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~-----~~~~~v~~~a~~~L~~l~~~ 552 (767)
+..++..+........ ...++.++..+.......-......+++.+...+. ..+......+..++..+...
T Consensus 550 l~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~e~l~~l~~~ 629 (959)
T d1wa5c_ 550 LKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNY 629 (959)
T ss_dssp HHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHh
Confidence 4455555532222111 12355555555433222222334445555555443 23466777777778777643
Q ss_pred C-hhHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCC
Q 004225 553 T-NDKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDG 598 (767)
Q Consensus 553 ~-~~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~ 598 (767)
. ++....+ ...++|.+...++.... +....++..+..+.....
T Consensus 630 ~~~~~~~~l-~~~l~p~i~~~~~~~~~--~~~~~~~~l~~~~~~~~~ 673 (959)
T d1wa5c_ 630 TQRQNLPLL-VDSMMPTFLTVFSEDIQ--EFIPYVFQIIAFVVEQSA 673 (959)
T ss_dssp SCGGGHHHH-HHHHHHHHHHHHHTTCT--TTHHHHHHHHHHHHHHCS
T ss_pred cCchhHHHH-HHHHHHHHHHHHhccch--hHHHHHHHHHHHHHHhCC
Confidence 2 3333333 23577888888887776 777778887777765443
No 75
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=91.86 E-value=1.2 Score=42.18 Aligned_cols=159 Identities=17% Similarity=0.193 Sum_probs=101.1
Q ss_pred CCHHHHHHHHHHHHHhc------CCCh-HHHHhcCchHHHHhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCChHHH
Q 004225 371 DDSGLQLEATTWFRKLL------LPPS-EKVIQSGVVARFVEFLTREDNPQLQLEAARALTNIASENTNVVIDGGAVPIF 443 (767)
Q Consensus 371 ~~~~~~~~a~~~L~~l~------~~~~-~~i~~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~l~~L 443 (767)
+++.++..+.-.++.+. .+.. +.++ ..+...+.+.....+ .+.+..++.+|+|+.. ...++.+
T Consensus 139 ~~~~l~~~a~La~gslv~~~c~~~~~~~~~~~-~~l~~~l~~~~~~~~-~~~~~~~LkaLGN~g~--------p~~i~~l 208 (336)
T d1lsha1 139 NRPILRKTAVLGYGSLVFRYCANTVSCPDELL-QPLHDLLSQSSDRAK-EEEIVLALKALGNAGQ--------PNSIKKI 208 (336)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTCSSCCGGGT-HHHHHHHHHHHHTTC-HHHHHHHHHHHHHHTC--------GGGHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCCcHHHH-HHHHHHHHHhhcccc-hHHHHHHHHHHhccCC--------HhHHHHH
Confidence 46667777777777666 1111 1111 112333344455666 6777788999999853 2356778
Q ss_pred HHhhCC-------CCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHc-cCCChHHHHHHHHHHHhhcCCCCCC
Q 004225 444 VKLLSS-------PSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLN-KHAKPSMLRNATKTLSRFCQGKPEP 515 (767)
Q Consensus 444 ~~lL~~-------~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~-~~~~~~~~~~~~~~L~~l~~~~~~~ 515 (767)
..++.. ....+|..|++++.+++...+.. +.+.+..++. ...+.++|..|..++..- . |.
T Consensus 209 ~~~l~~~~~~~~~~~~~vR~aAi~Alr~~~~~~p~~--------v~~~l~~i~~n~~e~~EvRiaA~~~lm~t--~-P~- 276 (336)
T d1lsha1 209 QRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRK--------VQEIVLPIFLNVAIKSELRIRSCIVFFES--K-PS- 276 (336)
T ss_dssp HTTSTTSSSCCCCSCHHHHHHHHHTTTTGGGTCHHH--------HHHHHHHHHHCTTSCHHHHHHHHHHHHHT--C-CC-
T ss_pred HHHhcccccccccccHHHHHHHHHHHHHhhhcCcHH--------HHHHHHHHHcCCCCChHHHHHHHHHHHhc--C-CC-
Confidence 777753 25789999999999998765432 2244555553 556788888888777552 1 11
Q ss_pred CccchhchHHHHHHHhc-CCCHHHHHHHHHHHHhhccCChhH
Q 004225 516 PFDQVRPALPALAQLVH-SNDNDVLRYACEALSCLSDGTNDK 556 (767)
Q Consensus 516 ~~~~~~~~i~~L~~ll~-~~~~~v~~~a~~~L~~l~~~~~~~ 556 (767)
...+..+...+. .++.+|.......|.+++......
T Consensus 277 -----~~~l~~i~~~l~~E~~~QV~sfv~S~l~~la~s~~P~ 313 (336)
T d1lsha1 277 -----VALVSMVAVRLRREPNLQVASFVYSQMRSLSRSSNPE 313 (336)
T ss_dssp -----HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCCSGG
T ss_pred -----HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhCCCcc
Confidence 234555666564 567888888888999999765543
No 76
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=91.14 E-value=0.056 Score=46.13 Aligned_cols=39 Identities=18% Similarity=0.179 Sum_probs=18.3
Q ss_pred CCCccEEEeccCCcccccccccc-cccccCCCceeeeCCc
Q 004225 91 FPSLKELRISKCPEFMVRTTSIF-TERVFPNLEKLKVDAK 129 (767)
Q Consensus 91 ~~~L~~L~l~~c~~l~~~~~~~~-~~~~l~~L~~L~l~~~ 129 (767)
.++|++|++++|..-......+. .....++|++|++.++
T Consensus 71 n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n 110 (167)
T d1pgva_ 71 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 110 (167)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred cccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCC
Confidence 45666677666642221111000 0123466777777654
No 77
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=90.83 E-value=0.1 Score=44.36 Aligned_cols=16 Identities=25% Similarity=0.258 Sum_probs=8.9
Q ss_pred CCCccEEEeccCCccc
Q 004225 91 FPSLKELRISKCPEFM 106 (767)
Q Consensus 91 ~~~L~~L~l~~c~~l~ 106 (767)
.++|++|+++++..+.
T Consensus 14 ~~~L~~L~L~~~~~i~ 29 (167)
T d1pgva_ 14 DTDLKEVNINNMKRVS 29 (167)
T ss_dssp CSSCCEEECTTCCSSC
T ss_pred CCCCcEEEeCCCCCCC
Confidence 3566666666554443
No 78
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=90.43 E-value=0.06 Score=45.86 Aligned_cols=68 Identities=12% Similarity=0.084 Sum_probs=28.7
Q ss_pred CCCccEEEeccCCcccccccccc-cccccCCCceeeeCCcccccccccCCCcchhcchhhHhhhccccceeeecC
Q 004225 91 FPSLKELRISKCPEFMVRTTSIF-TERVFPNLEKLKVDAKHVVTNKYHLGDERTILSLGDFLQRLHTMKVLQIGG 164 (767)
Q Consensus 91 ~~~L~~L~l~~c~~l~~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~ 164 (767)
.++++.+++.+|..-......+. .....++|+++++..+..-. .......+...++..++|+.|.+..
T Consensus 73 ~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i------~~~~~~~La~~L~~n~~L~~L~l~~ 141 (166)
T d1io0a_ 73 NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPL------GNNVEMEIANMLEKNTTLLKFGYHF 141 (166)
T ss_dssp CSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCC------CHHHHHHHHHHHHHCSSCCEEECCC
T ss_pred cccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcC------cHHHHHHHHHHHHhCCCcCEEeCcC
Confidence 45666666665543222111100 01234666665555332100 0111123344455556666665543
No 79
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]}
Probab=89.93 E-value=7.8 Score=36.25 Aligned_cols=175 Identities=11% Similarity=0.119 Sum_probs=108.4
Q ss_pred HHHHHHHHcc---CCChHHHHHHHHHHHhhcC----CCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCCh
Q 004225 482 LIPLLAQLNK---HAKPSMLRNATKTLSRFCQ----GKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTN 554 (767)
Q Consensus 482 i~~L~~ll~~---~~~~~~~~~~~~~L~~l~~----~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~ 554 (767)
+..+..++.. ..++.++..++-+++++.. ..+.+.......+...+.+.....+.+.+..++.+|+|+.. +
T Consensus 125 l~~~~~l~~~~~~~~~~~l~~~a~La~gslv~~~c~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~LkaLGN~g~--p 202 (336)
T d1lsha1 125 LSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNAGQ--P 202 (336)
T ss_dssp HHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCSSCCGGGTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTC--G
T ss_pred HHHHHHHHcCcccccchhHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCC--H
Confidence 4566666621 2467788888888876653 33444444555556666666667788888888999999853 2
Q ss_pred hHHHHHHhcCcHHHHHHHhcCCCCCCcccchHHHHHhhhhccCCcceeehhhhHHHHHHHhhhccCCHHHHHHHHHcCCH
Q 004225 555 DKIQAVIEADVCPRLVKLLLHPLPFPFGLTPPLWTVRYIVKGDGFLTQCTGIAKEACRTISNITAGNREQIQVVIDAGVI 634 (767)
Q Consensus 555 ~~~~~~~~~~~~~~L~~lL~~~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~v~~~a~~~l~nl~~~~~~~~~~~~~~~~i 634 (767)
..++.+..++..... ..+.... .++..|++++.+++...+...+
T Consensus 203 ---------~~i~~l~~~l~~~~~-----------------~~~~~~~--~vR~aAi~Alr~~~~~~p~~v~-------- 246 (336)
T d1lsha1 203 ---------NSIKKIQRFLPGQGK-----------------SLDEYST--RVQAEAIMALRNIAKRDPRKVQ-------- 246 (336)
T ss_dssp ---------GGHHHHHTTSTTSSS-----------------CCCCSCH--HHHHHHHHTTTTGGGTCHHHHH--------
T ss_pred ---------hHHHHHHHHhccccc-----------------ccccccH--HHHHHHHHHHHHhhhcCcHHHH--------
Confidence 245666666655321 0000000 6788888888888876655433
Q ss_pred HHHHHHHhcC--CchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhh-cCCCHHHHHHHHHHHHHHHHh
Q 004225 635 GPLVDLLQNA--EFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLL-LYADPEIVTICLKGLENILKV 705 (767)
Q Consensus 635 ~~L~~ll~~~--~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll-~~~~~~v~~~al~aL~~l~~~ 705 (767)
+.+..++.+. ++++|..|..++... .. +.... ..+...+ .+++.+|..-+...|.++...
T Consensus 247 ~~l~~i~~n~~e~~EvRiaA~~~lm~t-~P-~~~~l---------~~i~~~l~~E~~~QV~sfv~S~l~~la~s 309 (336)
T d1lsha1 247 EIVLPIFLNVAIKSELRIRSCIVFFES-KP-SVALV---------SMVAVRLRREPNLQVASFVYSQMRSLSRS 309 (336)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHHHHHHT-CC-CHHHH---------HHHHHHHTTCSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCCChHHHHHHHHHHHhc-CC-CHHHH---------HHHHHHHHhCcHHHHHHHHHHHHHHHHhC
Confidence 3455555544 578888888887653 21 33332 3333444 357888888888888888764
No 80
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=89.79 E-value=0.12 Score=43.79 Aligned_cols=40 Identities=15% Similarity=0.193 Sum_probs=21.7
Q ss_pred CCCccEEEeccCCccccccccccc--ccccCCCceeeeCCcc
Q 004225 91 FPSLKELRISKCPEFMVRTTSIFT--ERVFPNLEKLKVDAKH 130 (767)
Q Consensus 91 ~~~L~~L~l~~c~~l~~~~~~~~~--~~~l~~L~~L~l~~~~ 130 (767)
.++|++|+++++..++......+. ....++|++|++++|.
T Consensus 16 ~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~ 57 (166)
T d1io0a_ 16 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTR 57 (166)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSC
T ss_pred CCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCc
Confidence 467777777766555433211111 1245667777777664
No 81
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.71 E-value=0.046 Score=46.40 Aligned_cols=12 Identities=17% Similarity=0.230 Sum_probs=6.2
Q ss_pred cccccEEEecCC
Q 004225 199 TNNLVILRVKGC 210 (767)
Q Consensus 199 ~~~L~~L~i~~~ 210 (767)
+++|++|++++.
T Consensus 64 ~~~L~~L~Ls~N 75 (162)
T d1koha1 64 IPELLSLNLSNN 75 (162)
T ss_dssp CTTCCCCCCCSS
T ss_pred CCCCCEeeCCCc
Confidence 355555555543
No 82
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.50 E-value=0.093 Score=44.40 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=7.6
Q ss_pred ccCCCceeeeCCcc
Q 004225 117 VFPNLEKLKVDAKH 130 (767)
Q Consensus 117 ~l~~L~~L~l~~~~ 130 (767)
.+++|++|++++|.
T Consensus 63 ~~~~L~~L~Ls~N~ 76 (162)
T d1koha1 63 NIPELLSLNLSNNR 76 (162)
T ss_dssp HCTTCCCCCCCSSC
T ss_pred hCCCCCEeeCCCcc
Confidence 34555555555554
No 83
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.34 E-value=3 Score=39.47 Aligned_cols=136 Identities=14% Similarity=0.097 Sum_probs=92.6
Q ss_pred hhHHHHHHHhhhccCCHHHHHHHH-HcCCHHHHHHHHhcCCchhHHHHHHHHHHhhcCCC-HHHHH----------HHHH
Q 004225 606 IAKEACRTISNITAGNREQIQVVI-DAGVIGPLVDLLQNAEFFTKKEAARAISNAISGGT-HEQIK----------YLVR 673 (767)
Q Consensus 606 v~~~a~~~l~nl~~~~~~~~~~~~-~~~~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~-~~~~~----------~l~~ 673 (767)
...+++.++..+... ....+.++ ...++..+...+.++...++..|...|+.++.... ++... ..-+
T Consensus 72 ~e~e~l~CLkalmn~-~~G~~~vl~~~~~i~~l~~~L~s~~~~tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~~e 150 (343)
T d2bnxa1 72 NQHEIIRCLKAFMNN-KFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEMDE 150 (343)
T ss_dssp HHHHHHHHHHHHTSS-HHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcc-HHHHHHHHcChHHHHHHHHccCCCchHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHhcC
Confidence 344555666555553 34444444 45678899999999999999999999998875321 11211 1223
Q ss_pred cCChHHHHhhhcCC-CHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcCCChHHHHH
Q 004225 674 KGCIKPLCDLLLYA-DPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRHDSNGICEK 749 (767)
Q Consensus 674 ~~~i~~L~~ll~~~-~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~~~~~v~~~ 749 (767)
.+-+.++++.++.+ +.+.+..++..|-.++...++.. .--..+..|..+|..+.+..+....++++...
T Consensus 151 ~~RF~~lv~~l~~~~~~ey~~a~m~lIN~li~~~~dl~-------~R~~lR~E~~~~Gl~~il~~l~~~~~~~L~~Q 220 (343)
T d2bnxa1 151 VERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELD-------FRVHIRSELMRLGLHQVLQELREIENEDMKVQ 220 (343)
T ss_dssp SCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHH-------HHHHHHHHHHHTTHHHHHHHHTTCCCHHHHHH
T ss_pred CCcHHHHHHHHhccccHHHHHHHHHHHHHHHcCcccHH-------HHHHHHHHHHHCChHHHHHHHHccCChHHHHH
Confidence 46788888888754 67777777777777776544333 33456778889999999999988888876543
No 84
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.91 E-value=1.2 Score=36.08 Aligned_cols=93 Identities=8% Similarity=-0.006 Sum_probs=69.3
Q ss_pred CHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcC------CCHHHHHHHHHHHHHHHHhh
Q 004225 633 VIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLY------ADPEIVTICLKGLENILKVG 706 (767)
Q Consensus 633 ~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~------~~~~v~~~al~aL~~l~~~~ 706 (767)
++..+..-+.+.++.++..|...|-.++..+.+.....+.+.+++..|.+++.. .+..|+..++..+......-
T Consensus 46 a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~kil~li~~W~~~f 125 (145)
T d1ujka_ 46 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL 125 (145)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCHHHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHC
Confidence 355577778889999999999999999988778888888888899999998863 56789999999998887643
Q ss_pred hhhhccCCccccccHHHHHHHhhchH
Q 004225 707 EAEMNTGTANRYFNHYARLVEAAEGF 732 (767)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~l~~~g~~ 732 (767)
.... ........+...|.+
T Consensus 126 p~~~-------~~~~~Y~~L~~~Gii 144 (145)
T d1ujka_ 126 PEEV-------KIAEAYQMLKKQGIV 144 (145)
T ss_dssp TTCH-------HHHHHHHHHHHTTSC
T ss_pred CCch-------HHHHHHHHHHHCCCc
Confidence 2211 233345555566654
No 85
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.39 E-value=9.2 Score=35.86 Aligned_cols=126 Identities=13% Similarity=0.133 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHhc-CC-ChHHHH-hcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh---------------hhhHHH
Q 004225 373 SGLQLEATTWFRKLL-LP-PSEKVI-QSGVVARFVEFLTREDNPQLQLEAARALTNIAS---------------ENTNVV 434 (767)
Q Consensus 373 ~~~~~~a~~~L~~l~-~~-~~~~i~-~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---------------~~~~~~ 434 (767)
...+..+++.|+.+. +. ....++ ..+.+..++..+.++. +.++..|...|..++. +.....
T Consensus 70 ~~~e~e~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~-~~tr~~a~elL~~lc~~~~~~~g~~~vL~Al~~~~~~ 148 (343)
T d2bnxa1 70 SRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAV-PNMMIDAAKLLSALCILPQPEDMNERVLEAMTERAEM 148 (343)
T ss_dssp HHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTS-HHHHHHHHHHHHHHHTCCSSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHcChHHHHHHHHccCCCc-hHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHh
Confidence 557888999999888 33 244444 5678999999999988 9999999999988874 111223
Q ss_pred HhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCch------hHHHHHhcCCHHHHHHHHccCCChHHHHH
Q 004225 435 IDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSPR------DRDLVLSEKALIPLLAQLNKHAKPSMLRN 500 (767)
Q Consensus 435 ~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~~------~~~~~~~~g~i~~L~~ll~~~~~~~~~~~ 500 (767)
-+.+-...++..++. .+.+.+..++..+..+....++ .|..+...| +..+++.++...++++...
T Consensus 149 ~e~~RF~~lv~~l~~~~~~ey~~a~m~lIN~li~~~~dl~~R~~lR~E~~~~G-l~~il~~l~~~~~~~L~~Q 220 (343)
T d2bnxa1 149 DEVERFQPLLDGLKSGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLG-LHQVLQELREIENEDMKVQ 220 (343)
T ss_dssp HTSCTTHHHHHHTSTTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTT-HHHHHHHHTTCCCHHHHHH
T ss_pred cCCCcHHHHHHHHhccccHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHCC-hHHHHHHHHccCChHHHHH
Confidence 345667788887876 4678888777777777765554 234444554 4556666755555555443
No 86
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=80.55 E-value=2.1 Score=34.62 Aligned_cols=70 Identities=14% Similarity=0.172 Sum_probs=54.4
Q ss_pred ChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC-CChHHHHHHHHHH
Q 004225 676 CIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH-DSNGICEKAVKIL 754 (767)
Q Consensus 676 ~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~-~~~~v~~~a~~~l 754 (767)
++..|..-+.++++.++..|+..|..+++..+.. +...+...++++.+..+..+ .+..|++++..++
T Consensus 43 a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG~~------------f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li 110 (145)
T d1dvpa1 43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAP------------VHEEVFTKENCEMFSSFLESTPHENVRQKMLELV 110 (145)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHH------------HHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHccchH------------HHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 4566677788999999999999999999875432 34555566777888777755 4678999999999
Q ss_pred HHh
Q 004225 755 EIY 757 (767)
Q Consensus 755 ~~~ 757 (767)
..+
T Consensus 111 ~~W 113 (145)
T d1dvpa1 111 QTW 113 (145)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 87
>d1ujka_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.17 E-value=4.3 Score=32.62 Aligned_cols=71 Identities=13% Similarity=0.076 Sum_probs=56.7
Q ss_pred ChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC------CChHHHHH
Q 004225 676 CIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH------DSNGICEK 749 (767)
Q Consensus 676 ~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~------~~~~v~~~ 749 (767)
++..|..-+.++++.++..|+..|..+++..+. .+...+...++++.|..+... .+++|+++
T Consensus 46 a~r~l~krl~~~~~~~~l~aL~LLe~~vkNCG~------------~f~~evas~~Fl~~L~kli~~k~~~~~~~~~Vk~k 113 (145)
T d1ujka_ 46 ATRLLAHKIQSPQEWEAIQALTVLETCMKSCGK------------RFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNK 113 (145)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHTSCCH------------HHHHHHTSHHHHHHHHHHHCTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhH------------HHHHHHhhHHHHHHHHHHHhhccCCCCCcHHHHHH
Confidence 466677778889999999999999999986433 356667788888889888753 56789999
Q ss_pred HHHHHHHhc
Q 004225 750 AVKILEIYW 758 (767)
Q Consensus 750 a~~~l~~~~ 758 (767)
+..++..+.
T Consensus 114 il~li~~W~ 122 (145)
T d1ujka_ 114 ILELLYSWT 122 (145)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998763
No 88
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.90 E-value=2.2 Score=34.42 Aligned_cols=74 Identities=9% Similarity=-0.090 Sum_probs=60.1
Q ss_pred CHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcC------CCHHHHHHHHHHHHHHHHhh
Q 004225 633 VIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLY------ADPEIVTICLKGLENILKVG 706 (767)
Q Consensus 633 ~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~------~~~~v~~~al~aL~~l~~~~ 706 (767)
++..+..-++++++.++..|...|-.++..+.+.....+...+++..|..++.. .++.|+..++..+......-
T Consensus 39 a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~~fh~evask~Fl~~l~~li~~k~~~~~~~~~Vk~kil~li~~Wa~~f 118 (143)
T d1mhqa_ 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF 118 (143)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCHHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 345566777889999999999999998887777777777777889999998863 47789999999998887654
No 89
>d1mhqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.94 E-value=4.7 Score=32.30 Aligned_cols=70 Identities=10% Similarity=0.051 Sum_probs=55.6
Q ss_pred ChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC------CChHHHHH
Q 004225 676 CIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH------DSNGICEK 749 (767)
Q Consensus 676 ~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~------~~~~v~~~ 749 (767)
++..|..-+.++++.++..|+..|..+++..+. .+...+....+++.+..+... .++.|+++
T Consensus 39 a~ral~krl~~~n~~~~l~aL~LLe~~vkNcG~------------~fh~evask~Fl~~l~~li~~k~~~~~~~~~Vk~k 106 (143)
T d1mhqa_ 39 APWLLAHKIQSPQEKEALYALTVLEMCMNHCGE------------KFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGR 106 (143)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCH------------HHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCH------------HHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHH
Confidence 456667778889999999999999999987543 245666677888889988753 46889999
Q ss_pred HHHHHHHh
Q 004225 750 AVKILEIY 757 (767)
Q Consensus 750 a~~~l~~~ 757 (767)
+..++..+
T Consensus 107 il~li~~W 114 (143)
T d1mhqa_ 107 VIEILFSW 114 (143)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999865
No 90
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.01 E-value=6.3 Score=31.83 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=55.5
Q ss_pred ChHHHHhhhcCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHHHHHhcC------CChHHHHH
Q 004225 676 CIKPLCDLLLYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKIEDLKRH------DSNGICEK 749 (767)
Q Consensus 676 ~i~~L~~ll~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l~~~------~~~~v~~~ 749 (767)
+++.|..-+.++++.++..|+..|..++++.+.. +...+....+++.+..+... .++.|+++
T Consensus 40 a~rai~krl~~~~~~~~l~aL~LLe~~vkNCG~~------------F~~evask~Fl~~l~kli~~k~~~~~~~~~Vk~k 107 (151)
T d1juqa_ 40 AVRLLAHKIQSPQEWEALQALTVLEACMKNCGRR------------FHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTK 107 (151)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHH------------HHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccHH------------HHHHHhhHHHHHHHHHHHcccCCCCcccHHHHHH
Confidence 4566666778899999999999999999975543 45556677788888888764 36789999
Q ss_pred HHHHHHHhc
Q 004225 750 AVKILEIYW 758 (767)
Q Consensus 750 a~~~l~~~~ 758 (767)
+..++..+.
T Consensus 108 il~ll~~Wa 116 (151)
T d1juqa_ 108 VIELLYSWT 116 (151)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998763
No 91
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=66.68 E-value=3.9 Score=32.89 Aligned_cols=75 Identities=4% Similarity=-0.032 Sum_probs=57.5
Q ss_pred CHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcC-CCHHHHHHHHHHHHHHHHhhh
Q 004225 633 VIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLY-ADPEIVTICLKGLENILKVGE 707 (767)
Q Consensus 633 ~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~-~~~~v~~~al~aL~~l~~~~~ 707 (767)
++..|..-++++++.++..|...|-.++..+.......+...+++..|..+++. .+..|+..++..+......-.
T Consensus 43 a~ral~krl~~~n~~v~l~aL~LLd~~vkNcG~~f~~~i~s~~fl~~l~~l~~~~~~~~Vk~kil~li~~W~~~f~ 118 (145)
T d1dvpa1 43 AFAAIKKKMNSPNPHSSCYSLLVLESIVKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAFR 118 (145)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHSSHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHccchHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 355667778889999999999999988876555555555566778888888764 477899999999988887543
No 92
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.40 E-value=4.4 Score=32.85 Aligned_cols=74 Identities=8% Similarity=0.025 Sum_probs=57.8
Q ss_pred CHHHHHHHHhcCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHHHhhhcC------CCHHHHHHHHHHHHHHHHhh
Q 004225 633 VIGPLVDLLQNAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPLCDLLLY------ADPEIVTICLKGLENILKVG 706 (767)
Q Consensus 633 ~i~~L~~ll~~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~------~~~~v~~~al~aL~~l~~~~ 706 (767)
++..+..-+.+.++.++..|...|-.++..+.......+....++..|.+++.. .+..|+..++..+......-
T Consensus 40 a~rai~krl~~~~~~~~l~aL~LLe~~vkNCG~~F~~evask~Fl~~l~kli~~k~~~~~~~~~Vk~kil~ll~~Wa~~f 119 (151)
T d1juqa_ 40 AVRLLAHKIQSPQEWEALQALTVLEACMKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL 119 (151)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSHHHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHcccCCCCcccHHHHHHHHHHHHHHHHHc
Confidence 345566677888999999999998888887666666666677888888888863 36689999999999887653
No 93
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.92 E-value=36 Score=31.38 Aligned_cols=77 Identities=14% Similarity=0.056 Sum_probs=55.0
Q ss_pred HhCCChHHHHHhhCCCCHHHHHHHHHHHHHHhcCCchhHHHHHhcCCHHHHHHHHccCCChHHHHHHHHHHHhhcCCC
Q 004225 435 IDGGAVPIFVKLLSSPSDDVREKAVWALGNIARSSPRDRDLVLSEKALIPLLAQLNKHAKPSMLRNATKTLSRFCQGK 512 (767)
Q Consensus 435 ~~~~~l~~L~~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~ 512 (767)
++...+..|+.++.++|+.-|.....++..+-+.....|..+. ..+...+.+.+.......-...++..++.+..+-
T Consensus 130 id~~Fi~~Ll~lf~S~D~rER~~lk~~l~~iy~kf~~~R~~Ir-~~i~~if~~fi~e~~~~~gI~elLeil~sii~gf 206 (343)
T d2jaka1 130 IDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIR-KQINNIFYRFIYETEHHNGIAELLEILGSIINGF 206 (343)
T ss_dssp SCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhc
Confidence 3444677889999999999999999999999877777776543 3355666666644455555666777777776654
No 94
>d2jaka1 a.118.1.20 (A:30-372) Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.83 E-value=9.2 Score=35.61 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=50.9
Q ss_pred hcCchHHHHhhccCCCCHHHHHHHHHHHHHHHh---hhhHHHHhCCChHHHHHhhCC-CCHHHHHHHHHHHHHHhcCCc
Q 004225 396 QSGVVARFVEFLTREDNPQLQLEAARALTNIAS---ENTNVVIDGGAVPIFVKLLSS-PSDDVREKAVWALGNIARSSP 470 (767)
Q Consensus 396 ~~g~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~~~~~~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L~nl~~~~~ 470 (767)
....+..|+.++.++| +..|.....+|..+.. ..|..+. ..+...+.+++.. ....-....+++++.+..+..
T Consensus 131 d~~Fi~~Ll~lf~S~D-~rER~~lk~~l~~iy~kf~~~R~~Ir-~~i~~if~~fi~e~~~~~gI~elLeil~sii~gf~ 207 (343)
T d2jaka1 131 DQKFVLQLLELFDSED-PRERDFLKTTLHRIYGKFLGLRAYIR-KQINNIFYRFIYETEHHNGIAELLEILGSIINGFA 207 (343)
T ss_dssp CHHHHHHHHHHTTCSC-HHHHHHHHHHHHHHHHHCGGGHHHHH-HHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHhcc
Confidence 3446788999999999 9999999999999877 4444443 3345667776654 344445667788888876533
No 95
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=37.41 E-value=1.1e+02 Score=25.56 Aligned_cols=139 Identities=8% Similarity=-0.098 Sum_probs=85.7
Q ss_pred HhhccCCCCHHHHHHHHHHHHHHHhhhhHHHHhCCChHHHHHhhCC-CCHHHHHHHHHHH-HHHhcCCchhHHHHHhcCC
Q 004225 404 VEFLTREDNPQLQLEAARALTNIASENTNVVIDGGAVPIFVKLLSS-PSDDVREKAVWAL-GNIARSSPRDRDLVLSEKA 481 (767)
Q Consensus 404 ~~ll~~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~l~~L~~lL~~-~~~~v~~~a~~~L-~nl~~~~~~~~~~~~~~g~ 481 (767)
-.+.+++. -+.+..|+..+......... ..++.+..++.. ++.++....+..+ +.+....++ .
T Consensus 56 ~~L~~~~~-~E~r~~a~~ll~~~~~~~~~-----~~l~~~~~~~~~~~~Wd~vD~~~~~i~~~~~~~~~~---------~ 120 (213)
T d2b6ca1 56 EAYYQKTE-REYQYVAIDLALQNVQRFSL-----EEVVAFKAYVPQKAWWDSVDAWRKFFGSWVALHLTE---------L 120 (213)
T ss_dssp HHHHTSSS-HHHHHHHHHHHHHTGGGCCH-----HHHHHGGGGTTTTCSHHHHHHHHHHHHHHHHHSGGG---------H
T ss_pred HHHHcCch-HHHHHHHHHHHHHHHhccCH-----HHHHHHHHHHccCccHHHHHHHHHHHHHHHHHhhhh---------H
Confidence 34455666 78888888777655441111 123445555555 6677777665555 334433222 1
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHhhcCCCCCCCccchhchHHHHHHHhcCCCHHHHHHHHHHHHhhccCChhHHHHHH
Q 004225 482 LIPLLAQLNKHAKPSMLRNATKTLSRFCQGKPEPPFDQVRPALPALAQLVHSNDNDVLRYACEALSCLSDGTNDKIQAVI 561 (767)
Q Consensus 482 i~~L~~ll~~~~~~~~~~~~~~~L~~l~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 561 (767)
.+.+.... .+++.-+++.++.+........ ........+..++.+++.-|+.+..|+|..++..+++....++
T Consensus 121 ~~~l~~w~-~s~~~w~rR~aiv~~l~~~~~~------~~~~~~~~~~~~~~d~e~~i~kAigW~Lre~~k~~p~~v~~fl 193 (213)
T d2b6ca1 121 PTIFALFY-GAENFWNRRVALNLQLMLKEKT------NQDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEELM 193 (213)
T ss_dssp HHHHHHHT-TCSSHHHHHHHHHTTTTCGGGC------CHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHH-hCCCHHHHHHHHHHHHHHHHcc------cHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 23344455 8899999998876554332221 2234556666777788899999999999999988887766665
Q ss_pred hcC
Q 004225 562 EAD 564 (767)
Q Consensus 562 ~~~ 564 (767)
+..
T Consensus 194 ~~~ 196 (213)
T d2b6ca1 194 KEL 196 (213)
T ss_dssp HHS
T ss_pred HhC
Confidence 543
No 96
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.62 E-value=35 Score=19.70 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=24.7
Q ss_pred HHHHhhhcCCCHHHHHHHHHHHHHHHHhh
Q 004225 678 KPLCDLLLYADPEIVTICLKGLENILKVG 706 (767)
Q Consensus 678 ~~L~~ll~~~~~~v~~~al~aL~~l~~~~ 706 (767)
..|-++|++.+|+-.++|-+.|.++++..
T Consensus 9 klL~~LLkS~~PeDLqaANrLIK~mVked 37 (41)
T d1j2jb_ 9 KMLARLLKSSHPEDLRAANKLIKEMVQED 37 (41)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 35667999999999999999999998754
No 97
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.20 E-value=91 Score=24.53 Aligned_cols=70 Identities=11% Similarity=0.152 Sum_probs=47.5
Q ss_pred ChHHHHhhh-cCCCHHHHHHHHHHHHHHHHhhhhhhccCCccccccHHHHHHHhhchHHHH-HHHhc---CCChHHHHHH
Q 004225 676 CIKPLCDLL-LYADPEIVTICLKGLENILKVGEAEMNTGTANRYFNHYARLVEAAEGFKKI-EDLKR---HDSNGICEKA 750 (767)
Q Consensus 676 ~i~~L~~ll-~~~~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l-~~l~~---~~~~~v~~~a 750 (767)
++..|..-+ .+.++.++..|+..|..+++..+.. +...+...++++.+ ..... ..+.+|++++
T Consensus 50 a~ral~krL~~~~n~~v~l~aL~LLe~~vkNCG~~------------fh~evas~~Fl~~ll~~~~~~~~~~~~~Vk~ki 117 (153)
T d1elka_ 50 ALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHR------------FHVLVASQDFVESVLVRTILPKNNPPTIVHDKV 117 (153)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHH------------HHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHH------------HHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHH
Confidence 344444544 4678999999999999999875432 34555566666654 22322 2446799999
Q ss_pred HHHHHHh
Q 004225 751 VKILEIY 757 (767)
Q Consensus 751 ~~~l~~~ 757 (767)
..++..+
T Consensus 118 l~li~~W 124 (153)
T d1elka_ 118 LNLIQSW 124 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999987
No 98
>d1elka_ a.118.9.2 (A:) Tom1 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.09 E-value=49 Score=26.21 Aligned_cols=72 Identities=8% Similarity=0.117 Sum_probs=50.2
Q ss_pred HHHHHHHHh-cCCchhHHHHHHHHHHhhcCCCHHHHHHHHHcCChHHH-Hhhhc---CCCHHHHHHHHHHHHHHHHh
Q 004225 634 IGPLVDLLQ-NAEFFTKKEAARAISNAISGGTHEQIKYLVRKGCIKPL-CDLLL---YADPEIVTICLKGLENILKV 705 (767)
Q Consensus 634 i~~L~~ll~-~~~~~v~~~a~~~L~nl~~~~~~~~~~~l~~~~~i~~L-~~ll~---~~~~~v~~~al~aL~~l~~~ 705 (767)
+..|.+-|. +.++.++..|...|-.++..+....-..+.+.+++..+ +..+. ..+..|++.++..+......
T Consensus 51 ~ral~krL~~~~n~~v~l~aL~LLe~~vkNCG~~fh~evas~~Fl~~ll~~~~~~~~~~~~~Vk~kil~li~~W~~~ 127 (153)
T d1elka_ 51 LRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADA 127 (153)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHSCHHHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHccHHHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHHH
Confidence 444555554 56788999999888888877666666666666677654 33333 23457999999999988764
No 99
>d1eo0a_ a.48.3.1 (A:) Transcription elongation factor TFIIS N-domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.33 E-value=36 Score=23.36 Aligned_cols=35 Identities=11% Similarity=0.234 Sum_probs=30.4
Q ss_pred HHHHHhhchHHHHHHHhcCCChHHHHHHHHHHHHh
Q 004225 723 ARLVEAAEGFKKIEDLKRHDSNGICEKAVKILEIY 757 (767)
Q Consensus 723 ~~~l~~~g~~~~l~~l~~~~~~~v~~~a~~~l~~~ 757 (767)
...|.+.++-..+..+-.|++++|...|..++..+
T Consensus 38 ~d~L~~T~iG~~Vn~LRkh~~~~v~~lAk~Lv~~W 72 (77)
T d1eo0a_ 38 EKLLRETKVGVEVNKFKKSTNVEISKLVKKMISSW 72 (77)
T ss_dssp TTHHHHHHHHHHHHHCCSSSCTTHHHHHHHHHHHH
T ss_pred HHHHHHCCccHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 45788888888899998889999999999999865
Done!