Query 004229
Match_columns 766
No_of_seqs 558 out of 2717
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 18:24:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 99.8 4.6E-20 1.6E-24 180.5 12.6 93 660-753 58-161 (161)
2 3gla_A Low molecular weight he 99.8 1.1E-19 3.9E-24 163.6 13.1 86 658-744 4-99 (100)
3 4fei_A Heat shock protein-rela 99.8 1.3E-19 4.6E-24 164.0 12.7 87 658-745 6-97 (102)
4 3l1e_A Alpha-crystallin A chai 99.8 2.1E-19 7E-24 164.0 12.9 93 660-753 4-105 (106)
5 2wj5_A Heat shock protein beta 99.8 1.4E-19 4.8E-24 163.7 11.0 94 660-754 3-100 (101)
6 1gme_A Heat shock protein 16.9 99.8 6.8E-19 2.3E-23 170.5 13.0 95 658-753 43-150 (151)
7 3aab_A Putative uncharacterize 99.8 1.4E-18 4.9E-23 162.5 11.8 90 659-753 25-123 (123)
8 3q9p_A Heat shock protein beta 99.8 2E-18 6.7E-23 151.4 11.5 80 663-743 2-85 (85)
9 2klr_A Alpha-crystallin B chai 99.7 3.1E-18 1E-22 169.6 9.4 96 660-756 65-165 (175)
10 2y1y_A Alpha-crystallin B chai 99.7 2.5E-17 8.6E-22 145.7 10.1 84 664-748 2-89 (90)
11 2bol_A TSP36, small heat shock 99.7 1.4E-16 4.9E-21 170.9 11.9 94 658-753 98-198 (314)
12 2bol_A TSP36, small heat shock 99.6 4.1E-15 1.4E-19 159.7 9.6 83 660-743 222-314 (314)
13 3qww_A SET and MYND domain-con 99.4 7.8E-14 2.7E-18 156.6 4.0 91 217-332 6-96 (433)
14 3n71_A Histone lysine methyltr 99.4 2.6E-13 8.9E-18 154.6 4.9 91 217-332 6-96 (490)
15 3qwp_A SET and MYND domain-con 99.3 3E-13 1E-17 151.6 4.7 91 218-333 5-95 (429)
16 2odd_A Protein CBFA2T1; MYND z 99.1 1.1E-11 3.7E-16 102.6 2.8 59 239-330 2-60 (64)
17 2d8q_A BLU protein, zinc finge 98.7 6.5E-09 2.2E-13 87.5 3.6 45 282-331 15-59 (70)
18 2dj8_A Protein CBFA2T1; zinc f 98.7 6E-09 2E-13 85.1 3.2 45 281-330 14-58 (60)
19 2jw6_A Deformed epidermal auto 98.7 8E-09 2.7E-13 81.7 3.5 44 280-328 7-50 (52)
20 2od1_A Protein CBFA2T1; zinc f 98.6 1.1E-08 3.8E-13 83.5 3.2 45 281-330 12-56 (60)
21 1rl1_A Suppressor of G2 allele 98.6 1.1E-07 3.7E-12 87.1 9.5 84 656-745 7-90 (114)
22 2xcm_C SGT1-like protein, cyto 98.6 1.1E-07 3.7E-12 83.5 8.9 82 658-745 2-83 (92)
23 2k8q_A Protein SHQ1; beta-sand 97.0 0.0014 4.9E-08 61.4 7.4 75 659-744 4-83 (134)
24 3eud_A Protein SHQ1; CS domain 97.0 0.006 2.1E-07 55.5 11.1 77 658-745 17-98 (115)
25 1x5m_A Calcyclin-binding prote 96.9 0.0071 2.4E-07 56.2 11.8 80 659-744 21-104 (127)
26 1wh0_A Ubiquitin carboxyl-term 96.8 0.0053 1.8E-07 57.8 10.3 87 658-745 19-113 (134)
27 1wgv_A KIAA1068 protein; CS do 96.5 0.02 6.8E-07 52.9 11.5 82 657-744 18-102 (124)
28 1ejf_A Progesterone receptor P 96.4 0.018 6.1E-07 53.3 10.1 78 660-744 5-82 (125)
29 3qor_A Nuclear migration prote 96.3 0.022 7.6E-07 52.5 10.4 79 657-744 15-97 (121)
30 2o30_A Nuclear movement protei 96.2 0.023 7.9E-07 53.0 10.3 76 658-743 4-80 (131)
31 1wfi_A Nuclear distribution ge 96.1 0.016 5.5E-07 54.0 8.3 78 658-744 7-88 (131)
32 3igf_A ALL4481 protein; two-do 96.1 0.014 4.6E-07 64.2 8.9 70 660-742 299-369 (374)
33 2rh0_A NUDC domain-containing 95.9 0.042 1.5E-06 52.9 10.7 77 658-744 13-91 (157)
34 2kmw_A Uncharacterized protein 95.5 0.032 1.1E-06 53.4 8.1 79 658-745 4-83 (150)
35 2cg9_X CO-chaperone protein SB 94.8 0.014 4.8E-07 54.8 3.0 83 658-743 6-97 (134)
36 2yqq_A Zinc finger HIT domain- 89.9 0.23 7.9E-06 39.6 3.4 37 283-329 13-49 (56)
37 1x4s_A Protein FON, zinc finge 87.4 0.24 8E-06 39.9 1.9 34 283-317 12-45 (59)
38 2crb_A Nuclear receptor bindin 62.4 1.2 4.2E-05 38.9 -0.7 40 99-140 16-56 (97)
39 1n3j_A A612L, histone H3 lysin 57.9 4.8 0.00016 36.2 2.4 28 219-249 5-32 (119)
40 1lv3_A Hypothetical protein YA 54.0 7.2 0.00025 32.2 2.5 33 282-319 9-41 (68)
41 3q9p_A Heat shock protein beta 45.5 31 0.0011 29.0 5.4 35 708-743 6-40 (85)
42 4fei_A Heat shock protein-rela 36.9 75 0.0026 27.4 6.7 33 669-702 62-95 (102)
43 2l8e_A Polyhomeotic-like prote 34.2 17 0.00058 28.0 1.7 32 280-316 16-47 (49)
44 3gla_A Low molecular weight he 33.0 61 0.0021 27.7 5.4 34 709-743 14-47 (100)
45 3f9x_A Histone-lysine N-methyl 32.1 12 0.00042 35.3 0.8 27 220-249 32-58 (166)
46 2y1y_A Alpha-crystallin B chai 31.5 65 0.0022 27.2 5.2 34 709-743 6-39 (90)
47 1wg2_A Zinc finger (AN1-like) 30.0 45 0.0015 27.1 3.6 28 281-311 14-41 (64)
48 3l1e_A Alpha-crystallin A chai 28.5 70 0.0024 28.0 5.0 34 708-742 11-44 (106)
49 2wj5_A Heat shock protein beta 27.9 84 0.0029 27.2 5.4 35 708-743 10-44 (101)
50 1rl6_A Protein (ribosomal prot 27.3 59 0.002 31.6 4.7 46 681-742 11-56 (177)
51 1wfh_A Zinc finger (AN1-like) 26.8 61 0.0021 26.4 3.8 29 280-311 13-41 (64)
52 1nkw_E 50S ribosomal protein L 26.3 68 0.0023 32.1 5.0 46 681-742 39-84 (212)
53 3aab_A Putative uncharacterize 26.3 1E+02 0.0035 27.5 5.9 35 709-744 34-69 (123)
54 1wff_A Riken cDNA 2810002D23 p 25.9 97 0.0033 26.6 5.1 31 279-311 22-52 (85)
55 3qhp_A Type 1 capsular polysac 25.3 69 0.0024 28.9 4.7 101 469-577 2-106 (166)
56 2cql_A OK/SW-CL.103, 60S ribos 25.2 72 0.0025 28.0 4.4 47 681-742 20-69 (100)
57 4eld_A MJ16.5-P1, small heat s 25.1 1E+02 0.0036 28.8 6.0 34 709-743 66-99 (161)
58 3ooi_A Histone-lysine N-methyl 24.3 30 0.001 34.9 2.0 28 219-249 93-120 (232)
59 1n2z_A Vitamin B12 transport p 23.9 1.1E+02 0.0037 30.1 6.1 45 541-590 56-101 (245)
60 1x4w_A Hypothetical protein FL 23.1 45 0.0015 27.4 2.4 27 280-311 13-44 (67)
61 2r7a_A Bacterial heme binding 22.7 1.5E+02 0.005 29.3 6.9 47 541-592 58-107 (256)
62 3ope_A Probable histone-lysine 21.9 32 0.0011 34.4 1.6 27 220-249 76-102 (222)
63 2w5y_A Histone-lysine N-methyl 21.0 35 0.0012 33.5 1.7 27 220-249 54-80 (192)
64 3md9_A Hemin-binding periplasm 20.2 1.7E+02 0.0059 28.7 6.8 47 541-592 58-106 (255)
65 4gcn_A Protein STI-1; structur 20.2 20 0.00069 31.4 -0.2 41 99-145 84-124 (127)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.82 E-value=4.6e-20 Score=180.45 Aligned_cols=93 Identities=27% Similarity=0.353 Sum_probs=86.0
Q ss_pred cceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeecc----------Ccc-ccceEEEEEECCCCccccceEE
Q 004229 660 YVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDE----------STI-PGRSFMRKFRLPGMINIDEISA 728 (766)
Q Consensus 660 ~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~----------~e~-~~~~F~R~~~LP~~vd~~~I~A 728 (766)
++||+|++++|+|.++|||+++|||+|+++++ +|+|+|+++.+ .|+ .+|+|.|+|.||.+||.++|+|
T Consensus 58 pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A 136 (161)
T 4eld_A 58 PISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASA 136 (161)
T ss_dssp CEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEE
T ss_pred ceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEE
Confidence 49999999999999999999999999999999 59999998752 245 7899999999999999999999
Q ss_pred EEeCCEEEEEEeccCCCCCeeccCC
Q 004229 729 GYEDGVLTVMAPRSITRRGLLIDPA 753 (766)
Q Consensus 729 ~~~nGvL~I~lPK~~~~~~r~I~I~ 753 (766)
+|+||||+|++||.+.+++|+|+|+
T Consensus 137 ~~~nGvL~I~lpK~~~~~~r~I~Ie 161 (161)
T 4eld_A 137 KFENGVLSVILPKAESSIKKGINIE 161 (161)
T ss_dssp EEETTEEEEEEEBCGGGSCCCCCCC
T ss_pred EEECCEEEEEEEcCCCCCCcEeecC
Confidence 9999999999999988888888884
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.81 E-value=1.1e-19 Score=163.58 Aligned_cols=86 Identities=31% Similarity=0.468 Sum_probs=77.9
Q ss_pred CccceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccC----------ccccceEEEEEECCCCccccceE
Q 004229 658 ENYVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDES----------TIPGRSFMRKFRLPGMINIDEIS 727 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~----------e~~~~~F~R~~~LP~~vd~~~I~ 727 (766)
.|++||.|++++|+|.++|||+++|||+|+++++ .|+|+|+++.+. |+.+|+|.|+|.||.+||.++|+
T Consensus 4 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~i~ 82 (100)
T 3gla_A 4 VPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADGIT 82 (100)
T ss_dssp CCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTSCE
T ss_pred cCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHHeE
Confidence 4589999999999999999999999999999999 599999987432 45688999999999999999999
Q ss_pred EEEeCCEEEEEEeccCC
Q 004229 728 AGYEDGVLTVMAPRSIT 744 (766)
Q Consensus 728 A~~~nGvL~I~lPK~~~ 744 (766)
|+|+||+|+|++||.+.
T Consensus 83 A~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 83 AAGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEEETTEEEEEEEBC--
T ss_pred EEEeCCEEEEEEecCCC
Confidence 99999999999999875
No 3
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.81 E-value=1.3e-19 Score=164.02 Aligned_cols=87 Identities=21% Similarity=0.297 Sum_probs=80.2
Q ss_pred CccceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeecc-----CccccceEEEEEECCCCccccceEEEEeC
Q 004229 658 ENYVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDE-----STIPGRSFMRKFRLPGMINIDEISAGYED 732 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~-----~e~~~~~F~R~~~LP~~vd~~~I~A~~~n 732 (766)
.|++||.|++++|+|.++|||+++|||+|+++++ .|+|+|+++.+ .|+.+|+|.|+|.||.+||.++|+|+|+|
T Consensus 6 ~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~~i~A~~~~ 84 (102)
T 4fei_A 6 TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPASGVASLAG 84 (102)
T ss_dssp CCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTTCCEEEEET
T ss_pred cCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchhHcEEEEEC
Confidence 4589999999999999999999999999999999 59999998643 35678899999999999999999999999
Q ss_pred CEEEEEEeccCCC
Q 004229 733 GVLTVMAPRSITR 745 (766)
Q Consensus 733 GvL~I~lPK~~~~ 745 (766)
|+|+|++||.+++
T Consensus 85 GvL~I~lpK~~~~ 97 (102)
T 4fei_A 85 GVLTVRFEKLRPT 97 (102)
T ss_dssp TEEEEEEEBSSCC
T ss_pred CEEEEEEEccCcc
Confidence 9999999998765
No 4
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.80 E-value=2.1e-19 Score=164.04 Aligned_cols=93 Identities=19% Similarity=0.363 Sum_probs=82.4
Q ss_pred cceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCc---cccceEEEEEECCCCccccceEEEE-eCCEE
Q 004229 660 YVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDEST---IPGRSFMRKFRLPGMINIDEISAGY-EDGVL 735 (766)
Q Consensus 660 ~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e---~~~~~F~R~~~LP~~vd~~~I~A~~-~nGvL 735 (766)
..||+|++++|+|.++||||++|||+|+++++ .|+|+|++++..+ ...+.|.|+|.||.+||.++|+|+| +||+|
T Consensus 4 ~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL 82 (106)
T 3l1e_A 4 ISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGML 82 (106)
T ss_dssp SEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEE
T ss_pred ceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEE
Confidence 58999999999999999999999999999999 5999999864322 2346799999999999999999999 89999
Q ss_pred EEEEeccCCC-----CCeeccCC
Q 004229 736 TVMAPRSITR-----RGLLIDPA 753 (766)
Q Consensus 736 ~I~lPK~~~~-----~~r~I~I~ 753 (766)
+|++||.++. ++|+|+|.
T Consensus 83 ~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 83 TFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEEEEccCcccccCCCCeEeeec
Confidence 9999998765 67888885
No 5
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.80 E-value=1.4e-19 Score=163.69 Aligned_cols=94 Identities=22% Similarity=0.338 Sum_probs=81.4
Q ss_pred cceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCcc---ccceEEEEEECCCCccccceEEEE-eCCEE
Q 004229 660 YVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTI---PGRSFMRKFRLPGMINIDEISAGY-EDGVL 735 (766)
Q Consensus 660 ~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~---~~~~F~R~~~LP~~vd~~~I~A~~-~nGvL 735 (766)
.+||+|++++|+|.++|||+++|||+|+++++ .|+|+|+++.+.+. ..+.|.|+|.||.+||.++|+|+| +||+|
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL 81 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVL 81 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEE
Confidence 58999999999999999999999999999999 59999999754322 235699999999999999999999 89999
Q ss_pred EEEEeccCCCCCeeccCCC
Q 004229 736 TVMAPRSITRRGLLIDPAA 754 (766)
Q Consensus 736 ~I~lPK~~~~~~r~I~I~~ 754 (766)
+|++||.+..+++.+.|.+
T Consensus 82 ~I~lPK~~~~~~~~~~i~~ 100 (101)
T 2wj5_A 82 SIQATPASAQASLPSPPAA 100 (101)
T ss_dssp EEEECBCCCCCSSCC----
T ss_pred EEEEECCCcCCCCCCcccc
Confidence 9999999988888888765
No 6
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.78 E-value=6.8e-19 Score=170.47 Aligned_cols=95 Identities=41% Similarity=0.727 Sum_probs=83.5
Q ss_pred CccceEEEcCCeEEEEEEcCCCCCCCeEEEEE-CCeeEEEEEEeecc----------CccccceEEEEEECCCCccccce
Q 004229 658 ENYVHWTQTPESHIFSADLPGVRKEEIKVEVE-DSKYLIIRTEAVDE----------STIPGRSFMRKFRLPGMINIDEI 726 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~-~~~vL~I~g~~~~~----------~e~~~~~F~R~~~LP~~vd~~~I 726 (766)
.|++||+|++++|+|.++|||+++|||+|+++ ++ .|+|+|+++.+ .|+.+|+|.|+|.||.+||.++|
T Consensus 43 ~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i 121 (151)
T 1gme_A 43 NARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGN-VLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEV 121 (151)
T ss_dssp GGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTT-EEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGC
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEecCC-EEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccce
Confidence 46899999999999999999999999999995 56 59999998753 24568999999999999999999
Q ss_pred EEEEeCCEEEEEEeccCCCCC--eeccCC
Q 004229 727 SAGYEDGVLTVMAPRSITRRG--LLIDPA 753 (766)
Q Consensus 727 ~A~~~nGvL~I~lPK~~~~~~--r~I~I~ 753 (766)
+|+|+||||+|++||.++.++ ++|+|+
T Consensus 122 ~A~~~nGvL~I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 122 KAGLENGVLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp EEEEETTEEEEEEECCCCCTTCCCCCCCC
T ss_pred EEEEECCEEEEEEEccCcCCCCCeEeeeC
Confidence 999999999999999876644 566654
No 7
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.77 E-value=1.4e-18 Score=162.47 Aligned_cols=90 Identities=31% Similarity=0.329 Sum_probs=81.1
Q ss_pred ccceEEEcCCeEEEEEEcCCCCCCCeEEEEEC-CeeEEEEEEeeccC-------ccccceEEEEEECCCCccccce-EEE
Q 004229 659 NYVHWTQTPESHIFSADLPGVRKEEIKVEVED-SKYLIIRTEAVDES-------TIPGRSFMRKFRLPGMINIDEI-SAG 729 (766)
Q Consensus 659 ~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~-~~vL~I~g~~~~~~-------e~~~~~F~R~~~LP~~vd~~~I-~A~ 729 (766)
|++||.|++++|+|.++|||+++|||+|++++ + .|+|+|+++.+. |+.+ +|.|+|.||.+||.++| +|+
T Consensus 25 P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~~~~~~~~Er~~-~f~R~~~LP~~vd~~~i~~A~ 102 (123)
T 3aab_A 25 PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITEPGVKYLTQRPK-YVRKVIRLPYNVAKDAEISGK 102 (123)
T ss_dssp SCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCCCSCEEEECSCS-EEEEEEECSSEECTTCCCEEE
T ss_pred CcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccCCCeEEEEEEeE-EEEEEEECCCCcCcchhCeeE
Confidence 58999999999999999999999999999999 8 599999986542 4566 99999999999999999 999
Q ss_pred EeCCEEEEEEeccCCCCCeeccCC
Q 004229 730 YEDGVLTVMAPRSITRRGLLIDPA 753 (766)
Q Consensus 730 ~~nGvL~I~lPK~~~~~~r~I~I~ 753 (766)
|+||+|+|++||.+..+ |+|+
T Consensus 103 ~~~GvL~I~lPK~~~~~---I~Ie 123 (123)
T 3aab_A 103 YENGVLTIRIPIAGTSV---FKFE 123 (123)
T ss_dssp EETTEEEEEEEGGGEEC---SCCC
T ss_pred EcCCEEEEEEEcCCCCc---cccC
Confidence 99999999999987654 6663
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.76 E-value=2e-18 Score=151.35 Aligned_cols=80 Identities=25% Similarity=0.374 Sum_probs=70.3
Q ss_pred EEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCc---cccceEEEEEECCCCccccceEEEEe-CCEEEEE
Q 004229 663 WTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDEST---IPGRSFMRKFRLPGMINIDEISAGYE-DGVLTVM 738 (766)
Q Consensus 663 v~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e---~~~~~F~R~~~LP~~vd~~~I~A~~~-nGvL~I~ 738 (766)
+.|++++|.|.++||||++|||+|+++++ +|+|+|+++...+ ..+++|.|+|.||++||.++|+|+|+ ||||+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~ 80 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVE 80 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEE
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEE
Confidence 45899999999999999999999999999 5999999875432 24689999999999999999999998 9999999
Q ss_pred EeccC
Q 004229 739 APRSI 743 (766)
Q Consensus 739 lPK~~ 743 (766)
+||.+
T Consensus 81 lPK~k 85 (85)
T 3q9p_A 81 APMPK 85 (85)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99964
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.74 E-value=3.1e-18 Score=169.60 Aligned_cols=96 Identities=23% Similarity=0.299 Sum_probs=71.2
Q ss_pred cceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCcc---ccceEEEEEECCCCccccceEEEE-eCCEE
Q 004229 660 YVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTI---PGRSFMRKFRLPGMINIDEISAGY-EDGVL 735 (766)
Q Consensus 660 ~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~---~~~~F~R~~~LP~~vd~~~I~A~~-~nGvL 735 (766)
.+||+|++++|+|++|||||++|||+|++++| +|+|+|+++++.+. ..+.|.|+|.||++||.++|+|+| +||||
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL 143 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVL 143 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEE
Confidence 58999999999999999999999999999999 59999998754321 235799999999999999999999 79999
Q ss_pred EEEEeccCCCC-CeeccCCCCC
Q 004229 736 TVMAPRSITRR-GLLIDPAAVP 756 (766)
Q Consensus 736 ~I~lPK~~~~~-~r~I~I~~~~ 756 (766)
+|++||.+..+ .|+|+|....
T Consensus 144 ~I~lPK~~~~~~~r~I~I~~~~ 165 (175)
T 2klr_A 144 TVNGPRKQVSGPERTIPITREE 165 (175)
T ss_dssp EEEEECC---------------
T ss_pred EEEEECCCCCCCCeEEEEecCC
Confidence 99999987654 5899998654
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.71 E-value=2.5e-17 Score=145.74 Aligned_cols=84 Identities=25% Similarity=0.359 Sum_probs=67.0
Q ss_pred EEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCcc---ccceEEEEEECCCCccccceEEEE-eCCEEEEEE
Q 004229 664 TQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTI---PGRSFMRKFRLPGMINIDEISAGY-EDGVLTVMA 739 (766)
Q Consensus 664 ~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~---~~~~F~R~~~LP~~vd~~~I~A~~-~nGvL~I~l 739 (766)
.+++++|+|.++|||+++|||+|+++++ .|+|+|+++.+.+. ..+.|.|+|.||.+||.++|+|+| +||+|+|++
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~ 80 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG 80 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence 3678999999999999999999999999 59999998754221 235799999999999999999999 899999999
Q ss_pred eccCCCCCe
Q 004229 740 PRSITRRGL 748 (766)
Q Consensus 740 PK~~~~~~r 748 (766)
||.+.++++
T Consensus 81 pK~~~~~p~ 89 (90)
T 2y1y_A 81 PRKQVSGPE 89 (90)
T ss_dssp CBC------
T ss_pred EcCCCCCCC
Confidence 998876554
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.67 E-value=1.4e-16 Score=170.88 Aligned_cols=94 Identities=18% Similarity=0.226 Sum_probs=83.3
Q ss_pred CccceEEEcCC----eEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccC--ccccceEEEEEECCCCccccceEEEEe
Q 004229 658 ENYVHWTQTPE----SHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDES--TIPGRSFMRKFRLPGMINIDEISAGYE 731 (766)
Q Consensus 658 ~~~vdv~e~~~----~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~--e~~~~~F~R~~~LP~~vd~~~I~A~~~ 731 (766)
.|++||+|+++ +|+|++|||||++|||+|++++| +|+|+|+++.+. ++.+|+|.|+|.||++||.++|+|+|+
T Consensus 98 ~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~ 176 (314)
T 2bol_A 98 DFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATIT 176 (314)
T ss_dssp GGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEEC
T ss_pred CCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEe
Confidence 46899999999 99999999999999999999999 599999987543 367899999999999999999999999
Q ss_pred -CCEEEEEEeccCCCCCeeccCC
Q 004229 732 -DGVLTVMAPRSITRRGLLIDPA 753 (766)
Q Consensus 732 -nGvL~I~lPK~~~~~~r~I~I~ 753 (766)
||||+|++||.+++. +.|+|.
T Consensus 177 ~nGVL~I~lPK~~~~~-~~I~it 198 (314)
T 2bol_A 177 TDDVLVIEAPVNEPNY-KAIKLS 198 (314)
T ss_dssp SSSEEEEEEEBSSCCT-TTEEEE
T ss_pred CCCEEEEEEeccCccc-ceeecc
Confidence 999999999987653 445543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.56 E-value=4.1e-15 Score=159.66 Aligned_cols=83 Identities=17% Similarity=0.250 Sum_probs=70.6
Q ss_pred cceEEEcC---CeEEEEEEc-CCCCCCCeEEEEECCeeEEEEEEeeccC------ccccceEEEEEECCCCccccceEEE
Q 004229 660 YVHWTQTP---ESHIFSADL-PGVRKEEIKVEVEDSKYLIIRTEAVDES------TIPGRSFMRKFRLPGMINIDEISAG 729 (766)
Q Consensus 660 ~vdv~e~~---~~~~i~~dL-PG~~kedI~V~v~~~~vL~I~g~~~~~~------e~~~~~F~R~~~LP~~vd~~~I~A~ 729 (766)
..+|.+++ ++|.|.++| ||++||||+|+|++| +|+|+|+++.+. |+.+|+|.|+|.||++||.++|+|+
T Consensus 222 ~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~ 300 (314)
T 2bol_A 222 GLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAE 300 (314)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC------------CEEEEEEEECSSEECGGGCEEE
T ss_pred CCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEE
Confidence 45666655 589999999 999999999999999 599999997543 6789999999999999999999999
Q ss_pred EeCCEEEEEEeccC
Q 004229 730 YEDGVLTVMAPRSI 743 (766)
Q Consensus 730 ~~nGvL~I~lPK~~ 743 (766)
|+||||+|++||.+
T Consensus 301 ~~dGvL~i~~Pk~~ 314 (314)
T 2bol_A 301 IVDGLMVVEAPLFK 314 (314)
T ss_dssp EETTEEEEEEEEEC
T ss_pred EeCCEEEEEEecCC
Confidence 99999999999964
No 13
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.40 E-value=7.8e-14 Score=156.59 Aligned_cols=91 Identities=22% Similarity=0.438 Sum_probs=79.3
Q ss_pred cceEEEEcCCCCCCCCceeeeccCCCCCcccccccccCCCCCCCcccCCCccccccccccccCCCCcccccCCCcccCCC
Q 004229 217 IETVDVQWPPEMAKGNDLVAVTVSHPPGQVYDERASSTSHSTPTKYAEPTKEETFADVRMNSNGGLRQCATCEKEVHGDQ 296 (766)
Q Consensus 217 ~~~v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~~~s~~~~e~P~~ya~~~~~~~~~~~~~~~~~~~~~C~~C~k~~~~~~ 296 (766)
+++|++..++.+|||+ +|+++|++|++|+. +.| |+..+ ........|++|++... .
T Consensus 6 ~~~ve~~~~~~~GRgl---~A~r~i~~Ge~Il~-------e~P--~a~~~----------~~~~~~~~C~~C~~~~~--~ 61 (433)
T 3qww_A 6 RGGLERFCSAGKGRGL---RALRPFHVGDLLFS-------CPA--YACVL----------TVGERGHHCECCFARKE--G 61 (433)
T ss_dssp STTEEEEECTTSCEEE---EESSCBCTTCEEEE-------EEC--SEEEE----------CGGGTTTBCTTTCCBCS--S
T ss_pred CCcEEEeecCCCcCeE---EECCCCCCCCEEEe-------cCC--ceEEe----------cccccCCcCCcccccCC--C
Confidence 3559999999999999 99999999999999 888 66444 22345689999998754 7
Q ss_pred cccCCCCCceeecCHHHHhhhchhhhhhhchhhHHh
Q 004229 297 SVCCGRCRAVIYCSSTCQKQQWKDTHKSECGLYKAM 332 (766)
Q Consensus 297 l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l~~~ 332 (766)
+.+|++|+.+.|||++||+.||+ .||.+|+.++..
T Consensus 62 ~~~C~~C~~~~yCs~~Cq~~~w~-~Hk~eC~~l~~~ 96 (433)
T 3qww_A 62 LSKCGRCKQAFYCDVECQKEDWP-LHKLECSSMVVL 96 (433)
T ss_dssp CEECTTTSCCEESSHHHHHHHHH-HHTTTHHHHHHS
T ss_pred CCCCCCCcceeecChhhhhhhhh-HHHHHHHHHHHh
Confidence 89999999999999999999998 999999999764
No 14
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.35 E-value=2.6e-13 Score=154.63 Aligned_cols=91 Identities=29% Similarity=0.463 Sum_probs=79.0
Q ss_pred cceEEEEcCCCCCCCCceeeeccCCCCCcccccccccCCCCCCCcccCCCccccccccccccCCCCcccccCCCcccCCC
Q 004229 217 IETVDVQWPPEMAKGNDLVAVTVSHPPGQVYDERASSTSHSTPTKYAEPTKEETFADVRMNSNGGLRQCATCEKEVHGDQ 296 (766)
Q Consensus 217 ~~~v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~~~s~~~~e~P~~ya~~~~~~~~~~~~~~~~~~~~~C~~C~k~~~~~~ 296 (766)
|++|++..++.+|||+ +|+++|++|++|+. +.| |+..+ ........|++|++... +
T Consensus 6 ~~~v~v~~~~~~GR~l---vAtr~i~~Ge~Il~-------e~P--~~~v~----------~~~~~~~~C~~C~~~~~--~ 61 (490)
T 3n71_A 6 MENVEVFTSEGKGRGL---KATKEFWAADVIFA-------ERA--YSAVV----------FDSLINFVCHTCFKRQE--K 61 (490)
T ss_dssp CTTEEEEECSSSCEEE---EESSCBCTTCEEEE-------ECC--SEEEE----------CGGGTTTBCTTTCCBCS--C
T ss_pred CCceEEEecCCCCceE---EeccCCCCCCEEEe-------cCC--ceEEe----------cccccCCcCCCCCCCCC--C
Confidence 4569999999999999 99999999999999 888 65443 22345689999998643 7
Q ss_pred cccCCCCCceeecCHHHHhhhchhhhhhhchhhHHh
Q 004229 297 SVCCGRCRAVIYCSSTCQKQQWKDTHKSECGLYKAM 332 (766)
Q Consensus 297 l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l~~~ 332 (766)
+.+|++|+.+.|||++||+.||+ .||.+|+.++..
T Consensus 62 ~~~C~~C~~~~yCs~~Cq~~~w~-~Hk~eC~~~~~~ 96 (490)
T 3n71_A 62 LHRCGQCKFAHYCDRTCQKDAWL-NHKNECAAIKKY 96 (490)
T ss_dssp CEECTTTSCCEESSHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CCCCCCCCCcCcCCHHHhhhhhh-HHHHHhHHHHhc
Confidence 89999999999999999999999 999999999864
No 15
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.35 E-value=3e-13 Score=151.58 Aligned_cols=91 Identities=26% Similarity=0.481 Sum_probs=79.0
Q ss_pred ceEEEEcCCCCCCCCceeeeccCCCCCcccccccccCCCCCCCcccCCCccccccccccccCCCCcccccCCCcccCCCc
Q 004229 218 ETVDVQWPPEMAKGNDLVAVTVSHPPGQVYDERASSTSHSTPTKYAEPTKEETFADVRMNSNGGLRQCATCEKEVHGDQS 297 (766)
Q Consensus 218 ~~v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~~~s~~~~e~P~~ya~~~~~~~~~~~~~~~~~~~~~C~~C~k~~~~~~l 297 (766)
+.|++..++++|||+ +|+++|++|++|+. +.| |+..+ ........|++|++... .+
T Consensus 5 ~~i~~~~~~~~GR~l---~Atr~i~~Ge~Il~-------e~P--~~~~~----------~~~~~~~~C~~C~~~~~--~~ 60 (429)
T 3qwp_A 5 LKVEKFATANRGNGL---RAVTPLRPGELLFR-------SDP--LAYTV----------CKGSRGVVCDRCLLGKE--KL 60 (429)
T ss_dssp CSEEEEECSSSSEEE---EESSCBCTTCEEEE-------ECC--SEEEE----------CGGGBTTBCTTTCCBCS--SC
T ss_pred cceeecccCCCCCeE---EeCCCCCCCCEEEe-------cCC--ceeee----------ccccCCCcCcCCCCcCC--CC
Confidence 468899999999999 99999999999999 888 66544 22335689999998744 78
Q ss_pred ccCCCCCceeecCHHHHhhhchhhhhhhchhhHHhh
Q 004229 298 VCCGRCRAVIYCSSTCQKQQWKDTHKSECGLYKAMM 333 (766)
Q Consensus 298 ~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l~~~~ 333 (766)
.+|++|+.+.|||++||+.||+ .||.+|+.++...
T Consensus 61 ~~C~~C~~~~yCs~~Cq~~~w~-~Hk~eC~~~~~~~ 95 (429)
T 3qwp_A 61 MRCSQCRVAKYCSAKCQKKAWP-DHKRECKCLKSCK 95 (429)
T ss_dssp EECTTTSCCEESSHHHHHHTHH-HHHHHHHHHHHTT
T ss_pred CcCCCCCCcccCChhhhhhhhh-hhHHhhhhHHhcC
Confidence 9999999999999999999999 9999999998653
No 16
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=99.15 E-value=1.1e-11 Score=102.63 Aligned_cols=59 Identities=25% Similarity=0.557 Sum_probs=40.6
Q ss_pred cCCCCCcccccccccCCCCCCCcccCCCccccccccccccCCCCcccccCCCcccCCCcccCCCCCceeecCHHHHhhhc
Q 004229 239 VSHPPGQVYDERASSTSHSTPTKYAEPTKEETFADVRMNSNGGLRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQW 318 (766)
Q Consensus 239 ~d~~pG~vi~~~~s~~~~e~P~~ya~~~~~~~~~~~~~~~~~~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw 318 (766)
++|+||++|+. +.| ....|+.|++. ++.+|++|+.+.|||++||+.||
T Consensus 2 ~~~~~G~~il~-------~~~---------------------~~~~C~~C~~~----~~~~Cs~C~~~~YCs~~CQ~~~W 49 (64)
T 2odd_A 2 NLYFQGENLYF-------QGD---------------------SSESCWNCGRK----ASETCSGCNTARYCGSFCQHKDW 49 (64)
T ss_dssp --------------------C---------------------CSSSCTTTSSC----CCEEETTTSCCEESSHHHHHHHH
T ss_pred CcCCCCCEEee-------CCC---------------------CCCcCccccCC----CcccCCCCCChhhCCHHHHHHHH
Confidence 57999999999 666 22689999985 68999999999999999999999
Q ss_pred hhhhhhhchhhH
Q 004229 319 KDTHKSECGLYK 330 (766)
Q Consensus 319 ~~~Hk~eC~~l~ 330 (766)
+ .||.+|..+.
T Consensus 50 ~-~Hk~~C~~~~ 60 (64)
T 2odd_A 50 E-KHHHICGQTL 60 (64)
T ss_dssp H-HHTTTTTSSC
T ss_pred H-HHhHHHhccc
Confidence 9 8999998654
No 17
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=98.70 E-value=6.5e-09 Score=87.51 Aligned_cols=45 Identities=36% Similarity=0.837 Sum_probs=40.7
Q ss_pred CcccccCCCcccCCCcccCCCCCceeecCHHHHhhhchhhhhhhchhhHH
Q 004229 282 LRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQWKDTHKSECGLYKA 331 (766)
Q Consensus 282 ~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l~~ 331 (766)
...|..|++. ++.+|++|+.+.|||++||+.||+ .||.+|..+..
T Consensus 15 ~~~C~~C~~~----~~~~Cs~Ck~v~YCs~eCQ~~~W~-~HK~~C~~~~~ 59 (70)
T 2d8q_A 15 RPRCAYCSAE----ASKRCSRCQNEWYCCRECQVKHWE-KHGKTCVLAAQ 59 (70)
T ss_dssp CCBCSSSCCB----CCCBCTTTSCCBCSCHHHHHHTHH-HHHHHCCCCCC
T ss_pred CCcCCCCCCc----ccccCCCCCCEeeCCHHHhHHHHH-HHHHHHHHHHH
Confidence 4689999985 689999999999999999999999 69999997754
No 18
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.70 E-value=6e-09 Score=85.05 Aligned_cols=45 Identities=29% Similarity=0.764 Sum_probs=40.5
Q ss_pred CCcccccCCCcccCCCcccCCCCCceeecCHHHHhhhchhhhhhhchhhH
Q 004229 281 GLRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQWKDTHKSECGLYK 330 (766)
Q Consensus 281 ~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l~ 330 (766)
....|+.|++. ++.+|++|+.+.|||++||+.||+ .||.+|..+.
T Consensus 14 ~~~~C~~C~~~----~~~~Cs~C~~v~YCs~~CQ~~~W~-~Hk~~C~~~~ 58 (60)
T 2dj8_A 14 SSESCWNCGRK----ASETCSGCNTARYCGSFCQHKDWE-KHHHICSGPS 58 (60)
T ss_dssp CSCCCSSSCSC----CCEECTTTSCCEESSHHHHHHTHH-HHTTTSCCSS
T ss_pred CCcccccCCCC----CcccCCCCCCEeeeCHHHHHHHHH-HHHHHHHhcc
Confidence 34689999984 689999999999999999999999 8999998764
No 19
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.69 E-value=8e-09 Score=81.68 Aligned_cols=44 Identities=36% Similarity=0.913 Sum_probs=37.5
Q ss_pred CCCcccccCCCcccCCCcccCCCCCceeecCHHHHhhhchhhhhhhchh
Q 004229 280 GGLRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQWKDTHKSECGL 328 (766)
Q Consensus 280 ~~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~ 328 (766)
.....|..|++. ++.+|++|+.+.|||++||+.||+ .||.+|..
T Consensus 7 ~~~~~C~~C~~~----~~~~C~~C~~~~YCs~~CQ~~~W~-~Hk~~C~~ 50 (52)
T 2jw6_A 7 RKEQSCVNCGRE----AMSECTGCHKVNYCSTFCQRKDWK-DHQHICGQ 50 (52)
T ss_dssp ----CCSSSSSS----CSEECTTTCSSEESSHHHHHHHTT-TGGGTTTC
T ss_pred ccCCcCCCCCCC----CcCcCCCCCCEeecCHHHHHHHHH-HHCHHHcc
Confidence 345789999985 689999999999999999999999 79999974
No 20
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.64 E-value=1.1e-08 Score=83.45 Aligned_cols=45 Identities=31% Similarity=0.823 Sum_probs=40.3
Q ss_pred CCcccccCCCcccCCCcccCCCCCceeecCHHHHhhhchhhhhhhchhhH
Q 004229 281 GLRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQWKDTHKSECGLYK 330 (766)
Q Consensus 281 ~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l~ 330 (766)
....|..|++. ++.+|++|+.+.|||++||+.||+ .||.+|..+.
T Consensus 12 ~~~~C~~C~~~----~~~~Cs~C~~v~YCs~~CQ~~dW~-~Hk~~C~~~~ 56 (60)
T 2od1_A 12 SSESCWNCGRK----ASETCSGCNTARYCGSFCQHKDWE-KHHHICGQTL 56 (60)
T ss_dssp CSSCCTTTSSC----CCEECTTTSCCEESSHHHHHHHHH-HHTTTSSCSS
T ss_pred CCCccccCCCc----ccccCCCCCCeeecCHHHHHHHHH-HHhHHHcccc
Confidence 34689999985 689999999999999999999999 8999998654
No 21
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.62 E-value=1.1e-07 Score=87.11 Aligned_cols=84 Identities=14% Similarity=0.179 Sum_probs=74.6
Q ss_pred CCCccceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEE
Q 004229 656 IPENYVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVL 735 (766)
Q Consensus 656 ~~~~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL 735 (766)
.+.+++||+++++.+.|++++||+++++++|+++++. |.|++... ....|...+.|+..||+++.++++.+|.|
T Consensus 7 ~~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~-l~v~~~~~-----~~~~y~~~~~L~~~I~~e~s~~~~~~~~l 80 (114)
T 1rl1_A 7 QSKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKE-LSALVKLP-----SGEDYNLKLELLHPIIPEQSTFKVLSTKI 80 (114)
T ss_dssp -CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSC-EEEEEECT-----TSSEEEEEECBSSCCCGGGEEEEECSSSE
T ss_pred CCCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCE-EEEEEEeC-----CCcEEEEEeeCCCcCCccccEEEEECCEE
Confidence 3556899999999999999999999999999999995 99998752 13579999999999999999999999999
Q ss_pred EEEEeccCCC
Q 004229 736 TVMAPRSITR 745 (766)
Q Consensus 736 ~I~lPK~~~~ 745 (766)
+|+|+|.++.
T Consensus 81 ~i~L~K~~~~ 90 (114)
T 1rl1_A 81 EIKLKKPEAV 90 (114)
T ss_dssp EEEEECSSCC
T ss_pred EEEEEcCCCC
Confidence 9999998653
No 22
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.61 E-value=1.1e-07 Score=83.52 Aligned_cols=82 Identities=15% Similarity=0.175 Sum_probs=73.4
Q ss_pred CccceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEEEE
Q 004229 658 ENYVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVLTV 737 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I 737 (766)
.++++|+++++.+.|++.+||+++++++|+++++. |.|++... ....|...+.|+..||+++.++++.+|.|+|
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~-l~v~~~~~-----~~~~y~~~~~L~~~I~~~~s~~~~~~~~l~i 75 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQI-LSVVIEVP-----GEDAYYLQPRLFGKIIPDKCKYEVLSTKIEI 75 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSSB-EEEEECCT-----TSCCEEECCBBSSCBCGGGCEEEECSSCEEE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECCE-EEEEEEcC-----CCcEEEEeeEcCCccCchhEEEEEECCEEEE
Confidence 45899999999999999999999999999999996 99998642 1257999999999999999999999999999
Q ss_pred EEeccCCC
Q 004229 738 MAPRSITR 745 (766)
Q Consensus 738 ~lPK~~~~ 745 (766)
+|+|.++.
T Consensus 76 ~L~K~~~~ 83 (92)
T 2xcm_C 76 CLAKADII 83 (92)
T ss_dssp EEEBSSSC
T ss_pred EEEcCCCC
Confidence 99998643
No 23
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.0014 Score=61.44 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=65.3
Q ss_pred ccceEEEcCCeEEEEEEcCCCC--CCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCc-cccceEEEE--eCC
Q 004229 659 NYVHWTQTPESHIFSADLPGVR--KEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMI-NIDEISAGY--EDG 733 (766)
Q Consensus 659 ~~vdv~e~~~~~~i~~dLPG~~--kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~v-d~~~I~A~~--~nG 733 (766)
|...+..+++.++|.+.+|.+. ..++++.|++.. +... ...|.-++.||..| |.+..+|+| ++|
T Consensus 4 P~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~-F~F~----------~~PYyLRL~LP~~V~e~~~~kA~YD~d~~ 72 (134)
T 2k8q_A 4 PRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENM-IIFH----------LSPYYLRLRFPHELIDDERSTAQYDSKDE 72 (134)
T ss_dssp SEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSS-EEEC----------SSSSCEEECCSSCEECCSSCEEEEETTTT
T ss_pred ceEEEEECCCEEEEEEEcCccccCccccEEEEeCCE-EEEe----------cCCeEEEecCCCeeecCCCcceeEeccCC
Confidence 4788999999999999999999 899999999994 6664 34577789999998 889999999 489
Q ss_pred EEEEEEeccCC
Q 004229 734 VLTVMAPRSIT 744 (766)
Q Consensus 734 vL~I~lPK~~~ 744 (766)
.|+|++||..+
T Consensus 73 ~~~VtLpK~~~ 83 (134)
T 2k8q_A 73 CINVKVAKLNK 83 (134)
T ss_dssp EEEEEEEESST
T ss_pred EEEEEEeCCCC
Confidence 99999999754
No 24
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=96.96 E-value=0.006 Score=55.49 Aligned_cols=77 Identities=14% Similarity=0.278 Sum_probs=65.6
Q ss_pred CccceEEEcCCeEEEEEEcCCCC--CCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCc-cccceEEEE--eC
Q 004229 658 ENYVHWTQTPESHIFSADLPGVR--KEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMI-NIDEISAGY--ED 732 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLPG~~--kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~v-d~~~I~A~~--~n 732 (766)
.|...+..+++.+.|.+-+|-+. ..++++.|+++. ++... ..|--++.||..+ |-+.-+|+| ++
T Consensus 17 TP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~-F~F~~----------~PYyLRL~lP~~vved~~~~A~YD~d~ 85 (115)
T 3eud_A 17 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENM-IIFHL----------SPYYLRLRFPHELIDDERSTAQYDSKD 85 (115)
T ss_dssp CCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTE-EEEEE----------TTEEEEEECSSCEECSTTCEEEEETTT
T ss_pred CCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCE-EEEec----------CCeEEEEecCcceecCCCcceEEeCCC
Confidence 45789999999999999999977 889999999994 76654 3577789999986 778889999 48
Q ss_pred CEEEEEEeccCCC
Q 004229 733 GVLTVMAPRSITR 745 (766)
Q Consensus 733 GvL~I~lPK~~~~ 745 (766)
|.++|++||..+.
T Consensus 86 g~~~v~lpK~~~G 98 (115)
T 3eud_A 86 ECINVKVAKLNKN 98 (115)
T ss_dssp TEEEEEEEESSTT
T ss_pred cEEEEEEcCCcCC
Confidence 9999999998754
No 25
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.93 E-value=0.0071 Score=56.21 Aligned_cols=80 Identities=15% Similarity=0.296 Sum_probs=69.5
Q ss_pred ccceEEEcCCeEEEEEEcCCC---CCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEE-CCCCccccceEEEEeCCE
Q 004229 659 NYVHWTQTPESHIFSADLPGV---RKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFR-LPGMINIDEISAGYEDGV 734 (766)
Q Consensus 659 ~~vdv~e~~~~~~i~~dLPG~---~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~-LP~~vd~~~I~A~~~nGv 734 (766)
++++|+.+.+.+.|++.+||+ +++++.|+++++. |.|...... ...|.-.+. |-..||+++-..+...+.
T Consensus 21 ~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~-l~v~~~~~~-----~~~y~~~~~~L~~~I~~e~S~~~v~~~k 94 (127)
T 1x5m_A 21 SNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERS-FDLLVKNLN-----GKSYSMIVNNLLKPISVEGSSKKVKTDT 94 (127)
T ss_dssp CSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSE-EEEEECSCS-----SSCEEEEEECBSSCCCTTTCEEEEETTE
T ss_pred cEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCE-EEEEEEcCC-----CCcEEEEhHHhcCccCcccCEEEEeCCE
Confidence 479999999999999999999 8999999999996 999875321 146888885 999999999888899999
Q ss_pred EEEEEeccCC
Q 004229 735 LTVMAPRSIT 744 (766)
Q Consensus 735 L~I~lPK~~~ 744 (766)
++|+|-|.++
T Consensus 95 Vei~L~K~~~ 104 (127)
T 1x5m_A 95 VLILCRKKVE 104 (127)
T ss_dssp EEEEEECSSS
T ss_pred EEEEEEECCC
Confidence 9999999874
No 26
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=96.85 E-value=0.0053 Score=57.78 Aligned_cols=87 Identities=9% Similarity=0.179 Sum_probs=71.4
Q ss_pred CccceEEEc-CCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccC------cc-ccceEEEEEECCCCccccceEEE
Q 004229 658 ENYVHWTQT-PESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDES------TI-PGRSFMRKFRLPGMINIDEISAG 729 (766)
Q Consensus 658 ~~~vdv~e~-~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~------e~-~~~~F~R~~~LP~~vd~~~I~A~ 729 (766)
.+++||+.+ .+.+.|++.++|+.+++++|++.++. |.|+....... .+ ....|.-.+.|-..||+++-+.+
T Consensus 19 ~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~-l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~ 97 (134)
T 1wh0_A 19 FVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQD-FTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFC 97 (134)
T ss_dssp CCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSE-EEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEE
T ss_pred CCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCE-EEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEE
Confidence 357999999 99999999999999999999999996 99987543211 00 01278888899999999998888
Q ss_pred EeCCEEEEEEeccCCC
Q 004229 730 YEDGVLTVMAPRSITR 745 (766)
Q Consensus 730 ~~nGvL~I~lPK~~~~ 745 (766)
+..+-+.|+|.|.+..
T Consensus 98 v~~~kIeI~L~K~e~~ 113 (134)
T 1wh0_A 98 FTASRIDICLRKRQSQ 113 (134)
T ss_dssp ECSSEEEEEEEESSSC
T ss_pred EeCCEEEEEEEECCCC
Confidence 8899999999998643
No 27
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=96.52 E-value=0.02 Score=52.93 Aligned_cols=82 Identities=16% Similarity=0.209 Sum_probs=67.4
Q ss_pred CCccceEEEcCCeEEEEEEcC-CC-CCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCE
Q 004229 657 PENYVHWTQTPESHIFSADLP-GV-RKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGV 734 (766)
Q Consensus 657 ~~~~vdv~e~~~~~~i~~dLP-G~-~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGv 734 (766)
..+.+.|..+.+.+.|++.|| |+ +++|++|+++.+. |.|..+... ...+.-...|...|+++.-.-++++|-
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~-l~v~~~~~~-----~~~~~~~~~L~~~I~~e~S~w~i~~~k 91 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSS-IRVAMLEEN-----GERVLMEGKLTHKINTESSLWSLEPGK 91 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSE-EEEEEECSS-----SEEEEEEEEBSSCBCTTTCEEEECTTS
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCE-EEEEEEccC-----CCceEEcccccCcCCCcCCEEEEeCCC
Confidence 345799999999999999999 88 8999999999996 999875311 122446678999999999888888874
Q ss_pred -EEEEEeccCC
Q 004229 735 -LTVMAPRSIT 744 (766)
Q Consensus 735 -L~I~lPK~~~ 744 (766)
|.|+|-|.+.
T Consensus 92 ~v~i~L~K~~~ 102 (124)
T 1wgv_A 92 CVLVNLSKVGE 102 (124)
T ss_dssp EEEEEECBSSS
T ss_pred EEEEEEEECCC
Confidence 9999999864
No 28
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.35 E-value=0.018 Score=53.35 Aligned_cols=78 Identities=12% Similarity=0.141 Sum_probs=67.2
Q ss_pred cceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEEEEEE
Q 004229 660 YVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVLTVMA 739 (766)
Q Consensus 660 ~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~l 739 (766)
.++|+.+.+.+.|++.+|+. ++++|+++.+. |.+++.... ....|.-.+.|-..|++++-+.+..++-+.|+|
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~-l~~~~~~~~----~~~~y~~~l~L~~~I~~e~S~~~v~~~kiei~L 77 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSK-LTFSCLGGS----DNFKHLNEIDLFHCIDPNDSKHKRTDRSILCCL 77 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTE-EEEEEEETT----TTEEEEEEEEBSSCEEEEEEEEEECSSCEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCE-EEEEEEeCC----CCceEEEEEEccceeccccCEEEECCCEEEEEE
Confidence 69999999999999999996 79999999996 999887411 123588899999999999988888889999999
Q ss_pred eccCC
Q 004229 740 PRSIT 744 (766)
Q Consensus 740 PK~~~ 744 (766)
.|.++
T Consensus 78 ~K~~~ 82 (125)
T 1ejf_A 78 RKGES 82 (125)
T ss_dssp EESST
T ss_pred EECCC
Confidence 99864
No 29
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.30 E-value=0.022 Score=52.45 Aligned_cols=79 Identities=18% Similarity=0.201 Sum_probs=65.1
Q ss_pred CCccceEEEcCCeEEEEEEcC-C--CCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCC
Q 004229 657 PENYVHWTQTPESHIFSADLP-G--VRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDG 733 (766)
Q Consensus 657 ~~~~vdv~e~~~~~~i~~dLP-G--~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nG 733 (766)
..+.+.|..+.+.+.|++.|| | ++++|++|++..+. |.|..+.. .+.-...|...|+.+.-.-++++|
T Consensus 15 ~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~-l~v~~kg~--------~~~~~g~L~~~I~~deS~w~i~~~ 85 (121)
T 3qor_A 15 DLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRH-LRVGLKGQ--------PAIIDGELYNEVKVEESSWLIADG 85 (121)
T ss_dssp BCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTE-EEEEETTS--------CCSEEEEBSSCBCGGGCEEEEETT
T ss_pred cCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCE-EEEEEcCc--------ceEEeccccccccccccEEEEcCC
Confidence 345799999999999999999 4 78999999999996 88865421 123456789999999988889998
Q ss_pred -EEEEEEeccCC
Q 004229 734 -VLTVMAPRSIT 744 (766)
Q Consensus 734 -vL~I~lPK~~~ 744 (766)
.|.|+|-|.+.
T Consensus 86 ~~i~i~L~K~~~ 97 (121)
T 3qor_A 86 AVVTVHLEKINK 97 (121)
T ss_dssp TEEEEEEEBSSS
T ss_pred CEEEEEEEECCC
Confidence 99999999864
No 30
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.24 E-value=0.023 Score=53.00 Aligned_cols=76 Identities=12% Similarity=0.145 Sum_probs=62.6
Q ss_pred CccceEEEcCCeEEEEEEcC-CCCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEEE
Q 004229 658 ENYVHWTQTPESHIFSADLP-GVRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVLT 736 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLP-G~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL~ 736 (766)
.+.++|..+.+.+.|++.|| |+++++++|.+..+. |.|..+. . . .-...|...|+++.-.-++++|-|.
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~-l~v~~~g-----~---~-~~~~~L~~~I~~e~S~w~i~~~kv~ 73 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKK-ICVKNQG-----E---I-VIDGELLHEVDVSSLWWVINGDVVD 73 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTE-EEEEETT-----E---E-EEEEEBSSCEEEEEEEEEEETTEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCE-EEEEECC-----E---e-eEccccccccccccCEEEEeCCEEE
Confidence 35799999999999999996 899999999999996 9998631 1 1 4456799999999988888999999
Q ss_pred EEEeccC
Q 004229 737 VMAPRSI 743 (766)
Q Consensus 737 I~lPK~~ 743 (766)
|+|-|.+
T Consensus 74 i~L~K~~ 80 (131)
T 2o30_A 74 VNVTKKR 80 (131)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999984
No 31
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.06 E-value=0.016 Score=54.02 Aligned_cols=78 Identities=19% Similarity=0.233 Sum_probs=64.3
Q ss_pred CccceEEEcCCeEEEEEEcC-C--CCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCC-
Q 004229 658 ENYVHWTQTPESHIFSADLP-G--VRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDG- 733 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLP-G--~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nG- 733 (766)
.+.+.|..+.+.+.|++.|| | ++++|++|++..+. |.|..+.. ...-...|...|+++.-.-++++|
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~-l~v~~kg~--------~~~~~~~L~~~I~~e~s~w~i~~~k 77 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRH-LRVGLKGQ--------PPVVDGELYNEVKVEESSWLIEDGK 77 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTE-EEEEETTS--------CCSBCSCBSSCBCSTTCEEEEETTT
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCE-EEEEECCc--------eEEEecccccccccccCEEEEcCCC
Confidence 45799999999999999999 6 89999999999996 99986421 011234678889999988889998
Q ss_pred EEEEEEeccCC
Q 004229 734 VLTVMAPRSIT 744 (766)
Q Consensus 734 vL~I~lPK~~~ 744 (766)
.|.|+|-|.++
T Consensus 78 ~v~i~L~K~~~ 88 (131)
T 1wfi_A 78 VVTVHLEKINK 88 (131)
T ss_dssp EEEEEEEBSSS
T ss_pred EEEEEEEECCC
Confidence 89999999864
No 32
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=96.05 E-value=0.014 Score=64.16 Aligned_cols=70 Identities=14% Similarity=0.194 Sum_probs=58.0
Q ss_pred cceEEEcCCeEEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCcccc-ceEEEEeCCEEEEE
Q 004229 660 YVHWTQTPESHIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINID-EISAGYEDGVLTVM 738 (766)
Q Consensus 660 ~vdv~e~~~~~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~-~I~A~~~nGvL~I~ 738 (766)
++.|.+. .|.+.+.|||+++++|++.-.++. |+|+. |.|+|.+.||.....- -..|.|+||.|+|+
T Consensus 299 ~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gde-L~v~~----------g~~rR~i~LP~~L~~~~v~~A~~~~~~L~i~ 365 (374)
T 3igf_A 299 PITIDTH--NRQVRLFLPGFDKKQVKLTQYGPE-VTVEA----------GDQRRNIFLPPALSGRPITGAKFQNNYLIIS 365 (374)
T ss_dssp SEEEETT--TTEEEEECTTCCGGGCEEEEETTE-EEEEE----------TTEEEEEECCTTTTTCCEEEEEEETTEEEEE
T ss_pred CEEEEec--cEEEEEECCCCCHHHeEEEEECCe-EEEEE----------CCEeecccCCHHHcCCCccccEEECCEEEEE
Confidence 4555333 799999999999999999999997 99974 7899999999875544 35799999999999
Q ss_pred Eecc
Q 004229 739 APRS 742 (766)
Q Consensus 739 lPK~ 742 (766)
+-..
T Consensus 366 ~~~~ 369 (374)
T 3igf_A 366 FLEH 369 (374)
T ss_dssp ECCC
T ss_pred Eehh
Confidence 8543
No 33
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=95.91 E-value=0.042 Score=52.94 Aligned_cols=77 Identities=18% Similarity=0.296 Sum_probs=65.2
Q ss_pred CccceEEEcCCeEEEEEEcC-CCCCCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCC-EE
Q 004229 658 ENYVHWTQTPESHIFSADLP-GVRKEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDG-VL 735 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLP-G~~kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nG-vL 735 (766)
.+.+.|..+.+.+.|++.|| |+++++|+|++..+. |.|+.+. . . .-...|...|+++.-.-++++| +|
T Consensus 13 ~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~-L~v~~kg-----~---~-~l~g~L~~~I~~eeS~w~i~~~k~v 82 (157)
T 2rh0_A 13 TPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRH-VALAVGG-----R---E-ILKGKLFDSTIADEGTWTLEDRKMV 82 (157)
T ss_dssp CSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSE-EEEEETT-----E---E-EEEEEBSSCBCGGGCEEEEECCCEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccceEEEEecCE-EEEEECC-----E---E-EEeeccccccCccccEEEEcCCcEE
Confidence 45799999999999999998 899999999999996 9997641 1 1 2556799999999988889887 49
Q ss_pred EEEEeccCC
Q 004229 736 TVMAPRSIT 744 (766)
Q Consensus 736 ~I~lPK~~~ 744 (766)
.|+|-|.+.
T Consensus 83 ~I~L~K~~~ 91 (157)
T 2rh0_A 83 RIVLTKTKR 91 (157)
T ss_dssp EEEEEBSSC
T ss_pred EEEEEEcCC
Confidence 999999875
No 34
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=95.53 E-value=0.032 Score=53.41 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=66.1
Q ss_pred CccceEEEcCCeEEEEEEcCCCCCCCeEEEEE-CCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEEE
Q 004229 658 ENYVHWTQTPESHIFSADLPGVRKEEIKVEVE-DSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVLT 736 (766)
Q Consensus 658 ~~~vdv~e~~~~~~i~~dLPG~~kedI~V~v~-~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL~ 736 (766)
.|.++|+.+.+.+.|++.+|++ ++++|+++ ++. |.+++.. . ....|.-.+.|-..|+++ -+.+....-+.
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~-l~~~~~~-~----~~~~y~~~l~L~~~Idpe-S~~~v~~~kIe 74 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGL-FSFSALG-A----QGERFEFSLELYGKIMTE-YRKNVGLRNII 74 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTEE-EEEEEET-T----TTEEEEEEEEBSSCEEEE-EEEEEESSSEE
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCE-EEEEEEc-C----CCceEEEEeEhhhccccc-ceEEecCCEEE
Confidence 3589999999999999999998 58999999 774 9999871 1 124688899999999999 88888888899
Q ss_pred EEEeccCCC
Q 004229 737 VMAPRSITR 745 (766)
Q Consensus 737 I~lPK~~~~ 745 (766)
|+|.|.++.
T Consensus 75 i~L~K~e~~ 83 (150)
T 2kmw_A 75 FSIQKEERS 83 (150)
T ss_dssp EEEEECCSS
T ss_pred EEEEECCCC
Confidence 999998643
No 35
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=94.77 E-value=0.014 Score=54.80 Aligned_cols=83 Identities=8% Similarity=0.115 Sum_probs=61.2
Q ss_pred CccceEEEcCCe-------EEEEEEcCCCCCCCeEEEEECCeeEEEEEEeeccCc-cccceEEEEEECCCCccccceEEE
Q 004229 658 ENYVHWTQTPES-------HIFSADLPGVRKEEIKVEVEDSKYLIIRTEAVDEST-IPGRSFMRKFRLPGMINIDEISAG 729 (766)
Q Consensus 658 ~~~vdv~e~~~~-------~~i~~dLPG~~kedI~V~v~~~~vL~I~g~~~~~~e-~~~~~F~R~~~LP~~vd~~~I~A~ 729 (766)
.|.++|..+.+. +.|++.+|+++ +++|+++.+. |.+++....... .....|.-.+.|...||+++-+.+
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~~-l~~~~~~~~~~g~~~~~~y~~~l~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPSY-IELKAQSKPHVGDENVHHYQLHIDLYKEIIPEKTMHK 82 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSSE-EEECCEEC-------CEEBCEEEECSSCCCSSSEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECCE-EEEEEecccccCCccCceEEEEEEChhhccccccEEE
Confidence 346788888766 99999999984 8999999995 999876532100 012467788999999999999999
Q ss_pred EeCCE-EEEEEeccC
Q 004229 730 YEDGV-LTVMAPRSI 743 (766)
Q Consensus 730 ~~nGv-L~I~lPK~~ 743 (766)
+.++. +.|+|.|.+
T Consensus 83 v~~~~~vei~L~K~~ 97 (134)
T 2cg9_X 83 VANGQHYFLKLYKKD 97 (134)
T ss_dssp ECCC--CEEEEEECS
T ss_pred ECCCEEEEEEEEECC
Confidence 99988 999999987
No 36
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.87 E-value=0.23 Score=39.58 Aligned_cols=37 Identities=35% Similarity=0.812 Sum_probs=28.8
Q ss_pred cccccCCCcccCCCcccCCCCCceeecCHHHHhhhchhhhhhhchhh
Q 004229 283 RQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQWKDTHKSECGLY 329 (766)
Q Consensus 283 ~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw~~~Hk~eC~~l 329 (766)
..|..|+. . ...+|++|. +.|||.+|.+. |+..|...
T Consensus 13 ~~C~vC~~-~---~kY~CPrC~-~~yCSl~C~k~-----Hk~~C~~~ 49 (56)
T 2yqq_A 13 VVCVICLE-K---PKYRCPACR-VPYCSVVCFRK-----HKEQCNPE 49 (56)
T ss_dssp CCCTTTCS-C---CSEECTTTC-CEESSHHHHHH-----HHHHCCCC
T ss_pred CccCcCcC-C---CeeeCCCCC-CCeeCHHHHHH-----HHhhCcCC
Confidence 57999998 3 678999998 88999999754 55447543
No 37
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=87.39 E-value=0.24 Score=39.88 Aligned_cols=34 Identities=26% Similarity=0.663 Sum_probs=25.8
Q ss_pred cccccCCCcccCCCcccCCCCCceeecCHHHHhhh
Q 004229 283 RQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQ 317 (766)
Q Consensus 283 ~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~d 317 (766)
..|..|.......+..+|++|. +.|||..|.+.|
T Consensus 12 ~~C~vC~~~~~~~akY~CPrC~-~rYCSl~C~k~H 45 (59)
T 1x4s_A 12 GPCGFCPAGEVQPARYTCPRCN-APYCSLRCYRTH 45 (59)
T ss_dssp EEECSSCTTCCEEECEECTTTC-CEESSHHHHHHH
T ss_pred CcCcCCCCCcCCCccccCcCCC-CCccChHHHHHH
Confidence 5899998621111678999998 789999999754
No 38
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.42 E-value=1.2 Score=38.88 Aligned_cols=40 Identities=15% Similarity=0.059 Sum_probs=35.0
Q ss_pred eehhhhhHhhhhcCCcccccccccccccccccccc-cCCchhH
Q 004229 99 YMFRNENDGKRMTGSRETIRIPNVELLRVTFETES-LMFPSNK 140 (766)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 140 (766)
..|+|+|..+.+.|.+|+|+++..+. .+|+.|| +|+.+.+
T Consensus 16 H~~~RrAe~ll~~gkydeAIech~kA--a~yL~eAmkltqs~q 56 (97)
T 2crb_A 16 HQQSRRADRLLAAGKYEEAISCHRKA--TTYLSEAMKLTESEQ 56 (97)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH--HHHHHHHHTTCCCHH
T ss_pred hHhhhHHHHHHhcCCHHHHHHHHHHH--HHHHHHHHHhhccHH
Confidence 46899999999999999999999999 9999999 7764443
No 39
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=57.93 E-value=4.8 Score=36.23 Aligned_cols=28 Identities=25% Similarity=0.210 Sum_probs=26.4
Q ss_pred eEEEEcCCCCCCCCceeeeccCCCCCccccc
Q 004229 219 TVDVQWPPEMAKGNDLVAVTVSHPPGQVYDE 249 (766)
Q Consensus 219 ~v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~ 249 (766)
.++++.++..|+|+ +|+++|+.|+.|.+
T Consensus 5 ~~~v~~s~~~G~Gv---fA~~~I~~G~~I~e 32 (119)
T 1n3j_A 5 RVIVKKSPLGGYGV---FARKSFEKGELVEE 32 (119)
T ss_dssp SEEEECSCSSCCEE---EECCCBCSCEEECC
T ss_pred CEEEEECCCceeEE---EECCcCCCCCEEEE
Confidence 48999999999999 99999999999987
No 40
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=54.04 E-value=7.2 Score=32.20 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=22.8
Q ss_pred CcccccCCCcccCCCcccCCCCCceeecCHHHHhhhch
Q 004229 282 LRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQQWK 319 (766)
Q Consensus 282 ~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~dw~ 319 (766)
...|..|++...-... =..+.|||+.|+..|..
T Consensus 9 ~~~CP~Cgkp~~W~~~-----~~~rPFCSeRCr~iDLg 41 (68)
T 1lv3_A 9 TVNCPTCGKTVVWGEI-----SPFRPFCSKRCQLIDLG 41 (68)
T ss_dssp EEECTTTCCEEECSSS-----SSCCSSSSHHHHHHHHS
T ss_pred cCcCCCCCCccccccc-----CCCCcccCHHHHhhhHH
Confidence 4679999987531111 23567999999999865
No 41
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=45.52 E-value=31 Score=29.04 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=30.7
Q ss_pred cceEEEEEECCCCccccceEEEEeCCEEEEEEeccC
Q 004229 708 GRSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRSI 743 (766)
Q Consensus 708 ~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~~ 743 (766)
...|.-.+.|| +++.++|+-++++|.|+|..-+.+
T Consensus 6 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 40 (85)
T 3q9p_A 6 ADRWRVSLDVN-HFAPDELTVKTKDGVVEITGKHAA 40 (85)
T ss_dssp CCEEEEEEECT-TTCCSEEEEEEETTEEEEEEEEC-
T ss_pred CCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEcc
Confidence 35789999999 799999999999999999988754
No 42
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=36.93 E-value=75 Score=27.45 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=27.4
Q ss_pred eEEEEEEcC-CCCCCCeEEEEECCeeEEEEEEeec
Q 004229 669 SHIFSADLP-GVRKEEIKVEVEDSKYLIIRTEAVD 702 (766)
Q Consensus 669 ~~~i~~dLP-G~~kedI~V~v~~~~vL~I~g~~~~ 702 (766)
.|.-.+.|| +++.+.++-++++| +|+|+-.+.+
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~ 95 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLR 95 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSS
T ss_pred EEEEEEECCCCcchhHcEEEEECC-EEEEEEEccC
Confidence 345577899 59999999999999 7999987654
No 43
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=34.23 E-value=17 Score=28.02 Aligned_cols=32 Identities=28% Similarity=0.490 Sum_probs=21.5
Q ss_pred CCCcccccCCCcccCCCcccCCCCCceeecCHHHHhh
Q 004229 280 GGLRQCATCEKEVHGDQSVCCGRCRAVIYCSSTCQKQ 316 (766)
Q Consensus 280 ~~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~eCq~~ 316 (766)
....+|..|++.... -..=+.-.|||..|++.
T Consensus 16 ~~~~~C~~CG~~i~~-----~~~~r~krFCS~sCR~~ 47 (49)
T 2l8e_A 16 ANLLKCEYCGKYAPA-----EQFRGSKRFCSMTCAKR 47 (49)
T ss_dssp CSEEECTTTCCEEEG-----GGCTTTSSSCSHHHHHH
T ss_pred CCCCcChhccCcccc-----ccCCCCCccCCHHHHhh
Confidence 445689999986431 11233567999999875
No 44
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=33.04 E-value=61 Score=27.70 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=30.0
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEEEeccC
Q 004229 709 RSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRSI 743 (766)
Q Consensus 709 ~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~~ 743 (766)
..|.-.+.|| +++.++|+-++++|.|+|..-+..
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~~~~~L~I~g~~~~ 47 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQMDKGILSIRGERKS 47 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEEETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCCHHHEEEEEECCEEEEEEEEcC
Confidence 5788889999 799999999999999999987654
No 45
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=32.07 E-value=12 Score=35.30 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=25.6
Q ss_pred EEEEcCCCCCCCCceeeeccCCCCCccccc
Q 004229 220 VDVQWPPEMAKGNDLVAVTVSHPPGQVYDE 249 (766)
Q Consensus 220 v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~ 249 (766)
+++..++.+|+|+ +|+++|+.|+.|.+
T Consensus 32 l~v~~~~~kG~Gl---~A~~~I~~G~~I~e 58 (166)
T 3f9x_A 32 MKIDLIDGKGRGV---IATKQFSRGDFVVE 58 (166)
T ss_dssp EEEEEETTTEEEE---EESSCBCTTCEEEE
T ss_pred eEEEECCCceeEE---EECCCcCCCCEEEE
Confidence 8888889999999 99999999999988
No 46
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=31.50 E-value=65 Score=27.20 Aligned_cols=34 Identities=12% Similarity=0.154 Sum_probs=30.2
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEEEeccC
Q 004229 709 RSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRSI 743 (766)
Q Consensus 709 ~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~~ 743 (766)
..|.-.+.|| +++.++|+-.+++|.|+|..-+..
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGDVIEVHGKHEE 39 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 5788899999 899999999999999999987643
No 47
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=30.05 E-value=45 Score=27.13 Aligned_cols=28 Identities=29% Similarity=0.780 Sum_probs=19.7
Q ss_pred CCcccccCCCcccCCCcccCCCCCceeecCH
Q 004229 281 GLRQCATCEKEVHGDQSVCCGRCRAVIYCSS 311 (766)
Q Consensus 281 ~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~ 311 (766)
..++|..|.+... -....| +|... ||++
T Consensus 14 ~~~rC~~C~kkvg-l~~f~C-rCg~~-FC~~ 41 (64)
T 1wg2_A 14 PNNRCFSCNKKVG-VMGFKC-KCGST-FCGS 41 (64)
T ss_dssp CSCSCTTTCCCCT-TSCEEC-TTSCE-ECSS
T ss_pred cCCcChhhCCccc-ccCeEe-ecCCE-eccc
Confidence 4579999998742 123689 89865 7853
No 48
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=28.46 E-value=70 Score=28.00 Aligned_cols=34 Identities=3% Similarity=0.195 Sum_probs=30.0
Q ss_pred cceEEEEEECCCCccccceEEEEeCCEEEEEEecc
Q 004229 708 GRSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRS 742 (766)
Q Consensus 708 ~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~ 742 (766)
...|.-.+.|| +++.++|+-.+++|.|+|..-+.
T Consensus 11 ~~~~~v~~dlP-G~~~edi~V~v~~~~L~I~g~~~ 44 (106)
T 3l1e_A 11 RDKFVIFLDVK-HFSPEDLTVKVQEDFVEIHGKHN 44 (106)
T ss_dssp SSEEEEEEECT-TSCGGGEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEEECC-CCChHHEEEEEECCEEEEEEEEc
Confidence 36788999999 79999999999999999998653
No 49
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=27.93 E-value=84 Score=27.17 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=30.9
Q ss_pred cceEEEEEECCCCccccceEEEEeCCEEEEEEeccC
Q 004229 708 GRSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRSI 743 (766)
Q Consensus 708 ~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~~ 743 (766)
...|.-.+.|| +++.++|+-.+++|.|+|..-+..
T Consensus 10 ~~~~~v~~dlP-G~~~edI~V~v~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 10 PGYFSVLLDVK-HFSPEEISVKVVGDHVEVHARHEE 44 (101)
T ss_dssp SSCEEEEEECT-TSCGGGEEEEEETTEEEEEEEEEE
T ss_pred CCEEEEEEECC-CCcHHHeEEEEECCEEEEEEEEec
Confidence 35788999999 899999999999999999988754
No 50
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=27.34 E-value=59 Score=31.59 Aligned_cols=46 Identities=20% Similarity=0.314 Sum_probs=33.9
Q ss_pred CCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEEEEEEecc
Q 004229 681 KEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRS 742 (766)
Q Consensus 681 kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~ 742 (766)
|+.++|+++++ .++|+|.+ |...+.| +.+++ ...+||.|+|+.+..
T Consensus 11 P~gV~V~i~~~-~VtVkGpk--------G~L~~~~--~~~v~-----i~~~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGN-TVTVKGPK--------GELTRTF--HPDMT-----ITVEGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETT-EEEEEETT--------EEEEEEC--CTTCE-----EEEETTEEEEECSCC
T ss_pred CCCCEEEEeCC-EEEEECCC--------eEEEEEc--CCCEE-----EEEeCCEEEEEcCCC
Confidence 47889999999 59999975 6676666 44443 446899988876544
No 51
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=26.77 E-value=61 Score=26.38 Aligned_cols=29 Identities=31% Similarity=0.791 Sum_probs=20.0
Q ss_pred CCCcccccCCCcccCCCcccCCCCCceeecCH
Q 004229 280 GGLRQCATCEKEVHGDQSVCCGRCRAVIYCSS 311 (766)
Q Consensus 280 ~~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~ 311 (766)
...++|..|++...- ....| +|... ||++
T Consensus 13 ~~~~rC~~C~kkvgl-~~f~C-rCg~~-FC~~ 41 (64)
T 1wfh_A 13 QRPNRCTVCRKRVGL-TGFMC-RCGTT-FCGS 41 (64)
T ss_dssp SSCCCCTTTCCCCCT-TCEEC-SSSCE-ECTT
T ss_pred CcCCcChhhCCccCc-cCEEe-ecCCE-eccc
Confidence 345899999987521 23689 79865 7864
No 52
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=26.28 E-value=68 Score=32.09 Aligned_cols=46 Identities=11% Similarity=0.208 Sum_probs=33.6
Q ss_pred CCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCEEEEEEecc
Q 004229 681 KEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRS 742 (766)
Q Consensus 681 kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~ 742 (766)
|+.++|+++++ .++|+|.+ |...+.| +.+++ ...+||.|+|+.+..
T Consensus 39 P~gV~V~i~~~-~VtVKGPk--------G~L~~~~--~~~v~-----i~~e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDG-VFKVKGPK--------GELTVPY--NTELT-----VRQDGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCC-EEEEECCC--------EEEEEEC--CCCeE-----EEEECCEEEEEcCCC
Confidence 47888999999 59999986 6666665 44443 446899988876544
No 53
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=26.27 E-value=1e+02 Score=27.50 Aligned_cols=35 Identities=26% Similarity=0.219 Sum_probs=30.2
Q ss_pred ceEEEEEECCCCccccceEEEEeC-CEEEEEEeccCC
Q 004229 709 RSFMRKFRLPGMINIDEISAGYED-GVLTVMAPRSIT 744 (766)
Q Consensus 709 ~~F~R~~~LP~~vd~~~I~A~~~n-GvL~I~lPK~~~ 744 (766)
..|.-.+.|| +++.++|+-.+++ |.|+|..-+...
T Consensus 34 ~~~~v~~~lP-G~~~edi~V~v~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 34 GYLVVVADLA-GFNKEKIKARVSGQNELIIEAEREIT 69 (123)
T ss_dssp TEEEEEEECC-SCCGGGCEEEEETTTEEEEEEECCCC
T ss_pred CEEEEEEECC-CCCHHHEEEEEeCCCEEEEEEEEecc
Confidence 4677788899 7999999999999 999999987654
No 54
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=25.94 E-value=97 Score=26.58 Aligned_cols=31 Identities=29% Similarity=0.669 Sum_probs=20.8
Q ss_pred CCCCcccccCCCcccCCCcccCCCCCceeecCH
Q 004229 279 NGGLRQCATCEKEVHGDQSVCCGRCRAVIYCSS 311 (766)
Q Consensus 279 ~~~~~~C~~C~k~~~~~~l~~C~~C~~v~YCS~ 311 (766)
+...++|..|++...-.....| +|..+ ||++
T Consensus 22 k~~~~rC~~C~kkvgl~~~f~C-rCg~~-FC~~ 52 (85)
T 1wff_A 22 KKIMKHCFLCGKKTGLATSFEC-RCGNN-FCAS 52 (85)
T ss_dssp CCCCCBCSSSCCBCSSSSCEEC-TTCCE-ECTT
T ss_pred cccCccchhhCCeecccCCeEc-CCCCE-eccc
Confidence 3456899999997531124689 58865 7864
No 55
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=25.34 E-value=69 Score=28.86 Aligned_cols=101 Identities=11% Similarity=0.054 Sum_probs=53.3
Q ss_pred eEEEEEEccCCCCCChhhHHHHHhhccCcccEEEEEEcCCCCCCC-CCCccccCCceEEEEEeee--ehhhcccCCCCcE
Q 004229 469 EVILHYLGPEGELDWMPAFAEIGHLLNGSGNIQIVMVGPEVPTNL-SGTTSGISSRVRVNLLRGV--YQEEATYLPSPHV 545 (766)
Q Consensus 469 ~lvIHIVGA~~E~~~l~~weeLlhLlP~i~~L~IvfIGPel~~~~-~~~~~~~~~~l~i~~~~~l--Yhd~~~~~~~PDl 545 (766)
+++|-.+|.-.........-+.+..+....+++++++|..-.... ........- .+.+ +. ..+....+...|+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~--~v~~--g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKIKLLAQKLGV--KAEF--GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHHHHHHHHHTC--EEEC--CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHHHHHHHHcCC--eEEE--eecCHHHHHHHHHhCCE
Confidence 356667776544444443333333344445899999995321100 000011111 3333 32 3444456788899
Q ss_pred EEEecCCCCCCCChHHHHHHHhccCC-cEEEec
Q 004229 546 IIALNCVLDRNGSWSGALDVIKTMGF-PAFFTD 577 (766)
Q Consensus 546 IVaFnaGf~~~~~W~~TL~~L~~~~c-P~lfTs 577 (766)
+|...- ++.|.-++.--...++ |++.|+
T Consensus 78 ~v~ps~----~e~~~~~~~Eama~G~vPvi~~~ 106 (166)
T 3qhp_A 78 YVHAAN----VESEAIACLEAISVGIVPVIANS 106 (166)
T ss_dssp EEECCC----SCCCCHHHHHHHHTTCCEEEECC
T ss_pred EEECCc----ccCccHHHHHHHhcCCCcEEeeC
Confidence 887432 3566555555567886 999965
No 56
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=25.18 E-value=72 Score=28.00 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=30.5
Q ss_pred CCCeEEEEECCeeEEEEEEeeccCccccceEEEEEECCCCccccceEEEEeCCE---EEEEEecc
Q 004229 681 KEEIKVEVEDSKYLIIRTEAVDESTIPGRSFMRKFRLPGMINIDEISAGYEDGV---LTVMAPRS 742 (766)
Q Consensus 681 kedI~V~v~~~~vL~I~g~~~~~~e~~~~~F~R~~~LP~~vd~~~I~A~~~nGv---L~I~lPK~ 742 (766)
|+.++|+++++ .++|+|.+ |.-.|.|.- .. |+...+|+. |+|..+..
T Consensus 20 P~gV~V~i~~~-~VtVKGPk--------G~L~~~~~h-~~-----v~i~~e~~~~~~i~v~~~~~ 69 (100)
T 2cql_A 20 PENVDITLKGR-TVIVKGPR--------GTLRRDFNH-IN-----VELSLLGKKKKRLRVDKWWG 69 (100)
T ss_dssp CSSCEEEEETT-EEEEEETT--------EEEEEECCS-SC-----CEEEEECSSSCEEEEECCSS
T ss_pred CCCCEEEEeCC-EEEEECCC--------ceEEEEecc-Cc-----EEEEEcCCceeEEEEEccCC
Confidence 47889999999 59999975 555555431 23 344466665 77765543
No 57
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=25.10 E-value=1e+02 Score=28.85 Aligned_cols=34 Identities=24% Similarity=0.199 Sum_probs=28.7
Q ss_pred ceEEEEEECCCCccccceEEEEeCCEEEEEEeccC
Q 004229 709 RSFMRKFRLPGMINIDEISAGYEDGVLTVMAPRSI 743 (766)
Q Consensus 709 ~~F~R~~~LP~~vd~~~I~A~~~nGvL~I~lPK~~ 743 (766)
..|.-.+.|| +++.++|+-++++|.|+|+.-+..
T Consensus 66 ~~~~v~~dlP-G~~~edi~V~~~~~~L~I~g~~~~ 99 (161)
T 4eld_A 66 QHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSP 99 (161)
T ss_dssp SEEEEEEECT-TCCGGGEEEEEETTEEEEEEECCC
T ss_pred CEEEEEEECC-CCChHhEEEEEECCEEEEEEEEcc
Confidence 3566677788 699999999999999999988765
No 58
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=24.28 E-value=30 Score=34.89 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=26.0
Q ss_pred eEEEEcCCCCCCCCceeeeccCCCCCccccc
Q 004229 219 TVDVQWPPEMAKGNDLVAVTVSHPPGQVYDE 249 (766)
Q Consensus 219 ~v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~ 249 (766)
.+++..++.+|.|+ +|+++|++|+.|.+
T Consensus 93 ~lev~~t~~kG~Gl---~A~~~I~~G~~I~e 120 (232)
T 3ooi_A 93 EVEIFRTLQRGWGL---RTKTDIKKGEFVNE 120 (232)
T ss_dssp CEEEEECSSSSEEE---EESSCBCTTCEEEE
T ss_pred cEEEEEcCCceeEE---EECceecCCceeeE
Confidence 48899999999999 99999999999987
No 59
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=23.90 E-value=1.1e+02 Score=30.10 Aligned_cols=45 Identities=24% Similarity=0.288 Sum_probs=30.8
Q ss_pred CCCcEEEEecCCCCCCCChHHHHHHHhccCCcEEEecc-CHHHHHHHHHHH
Q 004229 541 PSPHVIIALNCVLDRNGSWSGALDVIKTMGFPAFFTDQ-SEISCANAKQVL 590 (766)
Q Consensus 541 ~~PDlIVaFnaGf~~~~~W~~TL~~L~~~~cP~lfTsy-Se~e~~~d~~~L 590 (766)
-+|||||+.+.+. -...+..|.+.++|+++... +..+....+..|
T Consensus 56 l~PDLIi~~~~~~-----~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~l 101 (245)
T 1n2z_A 56 LKPDLVIAWRGGN-----AERQVDQLASLGIKVMWVDATSIEQIANALRQL 101 (245)
T ss_dssp TCCSEEEECTTTS-----CHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCC-----cHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHH
Confidence 5899999954332 14678889999999998765 344555554444
No 60
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.12 E-value=45 Score=27.38 Aligned_cols=27 Identities=30% Similarity=0.801 Sum_probs=19.9
Q ss_pred CCCcccccCCCcccCCCc-----ccCCCCCceeecCH
Q 004229 280 GGLRQCATCEKEVHGDQS-----VCCGRCRAVIYCSS 311 (766)
Q Consensus 280 ~~~~~C~~C~k~~~~~~l-----~~C~~C~~v~YCS~ 311 (766)
...++|..|++... | ..| +|..+ ||+.
T Consensus 13 ~~~~rC~~C~kk~g---L~~~egf~C-rCg~~-FC~~ 44 (67)
T 1x4w_A 13 KSRRRCFQCQTKLE---LVQQELGSC-RCGYV-FCML 44 (67)
T ss_dssp SCTTBCSSSCCBCC---HHHHHHHCC-SSSCC-CCTT
T ss_pred ccCCcchhhCCeec---ccccCceEe-cCCCE-ehhc
Confidence 34579999999853 4 589 99866 7853
No 61
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=22.65 E-value=1.5e+02 Score=29.28 Aligned_cols=47 Identities=11% Similarity=0.014 Sum_probs=32.5
Q ss_pred CCCcEEEEecCCCCCCCChHHHHHHHhccCCcEEEecc---CHHHHHHHHHHHHH
Q 004229 541 PSPHVIIALNCVLDRNGSWSGALDVIKTMGFPAFFTDQ---SEISCANAKQVLRS 592 (766)
Q Consensus 541 ~~PDlIVaFnaGf~~~~~W~~TL~~L~~~~cP~lfTsy---Se~e~~~d~~~L~~ 592 (766)
-+|||||+...+.. .+.+..|.+.++|+++... +..+....+..|-+
T Consensus 58 l~PDLIi~~~~~~~-----~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~ 107 (256)
T 2r7a_A 58 LRPDSVITWQDAGP-----QIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAK 107 (256)
T ss_dssp TCCSEEEEETTCSC-----HHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCCCC-----HHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 58999999653211 4677889999999988643 56666666655543
No 62
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=21.88 E-value=32 Score=34.41 Aligned_cols=27 Identities=19% Similarity=0.069 Sum_probs=25.4
Q ss_pred EEEEcCCCCCCCCceeeeccCCCCCccccc
Q 004229 220 VDVQWPPEMAKGNDLVAVTVSHPPGQVYDE 249 (766)
Q Consensus 220 v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~ 249 (766)
|++..++.+|.|+ +|+++|++|+.|.+
T Consensus 76 lev~~t~~kG~Gl---~A~~~I~~G~~I~e 102 (222)
T 3ope_A 76 LERFRAEEKGWGI---RTKEPLKAGQFIIE 102 (222)
T ss_dssp CEEEECTTSSEEE---ECSSCBCTTCEEEE
T ss_pred EEEEEcCCCceEE---EECceECCCCEEEE
Confidence 7888899999999 99999999999988
No 63
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=21.01 E-value=35 Score=33.50 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=25.6
Q ss_pred EEEEcCCCCCCCCceeeeccCCCCCccccc
Q 004229 220 VDVQWPPEMAKGNDLVAVTVSHPPGQVYDE 249 (766)
Q Consensus 220 v~~~~~~~~GRg~~~~~a~~d~~pG~vi~~ 249 (766)
|++..++..|+|+ +|+++|+.|+.|.+
T Consensus 54 l~V~~s~~~G~Gl---fA~~~I~~G~~I~E 80 (192)
T 2w5y_A 54 VGVYRSPIHGRGL---FCKRNIDAGEMVIE 80 (192)
T ss_dssp EEEEECSSSSEEE---EESSCBCTTCEEEE
T ss_pred EEEEEcCCceeEE---EECcccCCCCEEEE
Confidence 8888899999999 99999999999988
No 64
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.24 E-value=1.7e+02 Score=28.71 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=33.3
Q ss_pred CCCcEEEEecCCCCCCCChHHHHHHHhccCCcEEEec--cCHHHHHHHHHHHHH
Q 004229 541 PSPHVIIALNCVLDRNGSWSGALDVIKTMGFPAFFTD--QSEISCANAKQVLRS 592 (766)
Q Consensus 541 ~~PDlIVaFnaGf~~~~~W~~TL~~L~~~~cP~lfTs--ySe~e~~~d~~~L~~ 592 (766)
-+|||||+..... -.+.+..|.+.++|+++.+ .+..+....+..|-+
T Consensus 58 l~PDlIi~~~~~~-----~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~ 106 (255)
T 3md9_A 58 MKPTMLLVSELAQ-----PSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVAT 106 (255)
T ss_dssp TCCSEEEEETTCS-----CHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHH
T ss_pred cCCCEEEEcCCcC-----chhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHH
Confidence 5999999975421 1467888999999999875 466666666655543
No 65
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=20.23 E-value=20 Score=31.41 Aligned_cols=41 Identities=7% Similarity=-0.125 Sum_probs=31.7
Q ss_pred eehhhhhHhhhhcCCcccccccccccccccccccccCCchhHHHHHh
Q 004229 99 YMFRNENDGKRMTGSRETIRIPNVELLRVTFETESLMFPSNKKMIRS 145 (766)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (766)
+.|.++|.+|..+|++++|++.|.+.|.+. -.++..++++.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~~~~~kal~~~------~~~~~~~~l~~ 124 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAVQWFHRSLSEF------RDPELVKKVKE 124 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------cCHHHHHHHHH
Confidence 578899999999999999999998884321 23566666655
Done!