Query 004230
Match_columns 766
No_of_seqs 144 out of 732
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 18:26:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004230.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004230hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a01_A Proton pyrophosphatase; 100.0 2E-266 6E-271 2215.0 54.9 766 1-766 1-766 (766)
2 4av3_A K(+)-stimulated pyropho 100.0 8E-250 3E-254 2100.1 47.7 680 12-758 13-732 (735)
3 2dae_A KIAA0733 protein; mitog 32.0 39 0.0013 29.2 3.6 39 602-640 11-53 (75)
4 4av3_A K(+)-stimulated pyropho 27.6 5.4E+02 0.019 30.6 13.4 78 402-502 83-160 (735)
5 4f0a_B Protein WNT-8, XWNT-8; 25.9 41 0.0014 35.9 3.5 23 593-615 18-40 (316)
6 2keb_A DNA polymerase subunit 23.0 9.2 0.00032 34.8 -1.8 50 582-640 11-60 (101)
7 3hd7_A Vesicle-associated memb 21.5 1.9E+02 0.0064 25.2 6.3 40 71-110 42-85 (91)
8 3din_C Preprotein translocase 21.2 81 0.0028 34.9 4.8 88 570-661 298-385 (431)
9 3fss_A Histone chaperone RTT10 18.3 84 0.0029 32.5 3.8 32 606-639 99-130 (237)
10 4a01_A Proton pyrophosphatase; 17.2 9.1E+02 0.031 28.8 12.4 143 140-296 573-740 (766)
No 1
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=100.00 E-value=1.7e-266 Score=2214.97 Aligned_cols=766 Identities=89% Similarity=1.360 Sum_probs=700.9
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCcchhhhhhcCCCchhhhHHHHHHHHH
Q 004230 1 MGSTLLSELATEILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSA 80 (766)
Q Consensus 1 ~~~~~~s~~a~~~~~~~~~~l~l~~a~~~~~~v~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~g~~~~~~~~~m~eIa~~ 80 (766)
||.+.+|+.+++.++++++++|++||+|+|++|+|+|+++++..+.+.+++||.+|++.+|++|.++|++.+|||||+++
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~Gi~fa~~~~~~vs~v~~~~~~~~~~~~~~~~g~~~~l~~~~~g~~~~~~~~~m~eIa~a 80 (766)
T 4a01_A 1 MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNA 80 (766)
T ss_dssp -CCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCC-------------------------CCHHHHHHHHHHHH
T ss_pred CCcchhhhhhhhhHhHHHHHHHHHHHHHHHHheEeEEecCCccccccccccCCcccccchhhcccchHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999766433334456788889999999998888889999999999
Q ss_pred HHHhHHHhHHhhhhhHHHHHHHHHHHHHHHhhcccCcccCCCcccccccccccchhhhhhHHHHHHHHHHHHHHHhhhHh
Q 004230 81 ISEGATSFLFTEYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLG 160 (766)
Q Consensus 81 I~eGA~AfL~~qyk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Fl~Ga~~S~laG~iG 160 (766)
|||||++||+||||++++|.++++++|+++++...++++++|++.++..++|.+++..+++++++|++|++||.++||+|
T Consensus 81 I~eGA~afL~rqYk~i~~~~vv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Fl~Ga~~S~~aG~iG 160 (766)
T 4a01_A 81 ISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACSYDKTKTCKPALATAIFSTVSFLLGGVTSLVSGFLG 160 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTCCCCEEETTEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988776656667777888888888888888888999999999999999999999
Q ss_pred hhhhhhhhHhhHHHHhhChhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCCCchhhhHHHHhhchhhHHHHHH
Q 004230 161 MKIATYANARTTLEARKSVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALF 240 (766)
Q Consensus 161 M~vAt~aN~Rta~aA~~~~~~al~vafr~G~VmGl~vvglgLl~l~~~~~~~~~~~~~~~~~~~~~i~gfg~GaS~iALF 240 (766)
||+|||||+|||+|||+++++||++|||+|+||||+|+||+|++++++|++|..++++++.+.++++.||+||+|++|||
T Consensus 161 M~vat~ANvRtA~AA~~gl~~al~vAfr~GaVmGl~vvglgLlgl~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~iAlF 240 (766)
T 4a01_A 161 MKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALF 240 (766)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhcCcchhhhhHHHhhcchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987666666666778999999999999999
Q ss_pred HHHhcccccchhhccccccchhccCCCCCCCCCccccccccccccccccccchhhhhhHHHHHHHHHHHHHhhhcCCccc
Q 004230 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHE 320 (766)
Q Consensus 241 aRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLfESy~~si~aamvlg~~~~~~~~~~ 320 (766)
+||||||||||||||||||||||+|||||||||||||||||||||||||||||||||||++++++||+|+....+..+..
T Consensus 241 aRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPAvIADnVGDNVGD~AGmgADLFESy~~t~iaamvlg~~~~~~~~~~ 320 (766)
T 4a01_A 241 GRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHE 320 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCTTCTTCTTHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTSHHHHTTC
T ss_pred HHhccchhhhhhhhccccccccccCCCCcCCCCcchhhhhhccccccccccchhHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998542221224
Q ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccccccc
Q 004230 321 FTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWIGLPSSFTIYNFGAQKVVK 400 (766)
Q Consensus 321 ~~~v~~Pl~i~a~gil~siig~~~~~~~~~~~~~~~~~~aL~~g~~~s~il~~i~~~~~~~~~l~~~~~~~~~~~~~~~~ 400 (766)
+..++|||+++++||++|+||++++|++++.++++|+|++||+|+|+|++++++++|++++|++|+.+.....++.....
T Consensus 321 ~~~v~~PL~i~a~gii~siig~~~v~~~~~~~~~~~~~~aL~~g~~~s~il~~v~~~~~~~~~l~~~~~~~~~~~~~~~~ 400 (766)
T 4a01_A 321 LTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVK 400 (766)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHTTCCCCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSEEEEEETTEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHhheeEeeccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccch
Confidence 56799999999999999999999998777777888999999999999999999999999999998765543222223456
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccCCcchhHHHHhhcccCchhHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 004230 401 NWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMY 480 (766)
Q Consensus 401 ~~~~~~~~~~Gl~~g~lI~~~TeYyTs~~y~PVr~IA~as~tG~AtnII~Gla~Gm~St~~pvl~i~~ai~~sy~l~Gly 480 (766)
+|++|+|+++|+++|++|+++||||||++|||||+||++|+||||||||+||++||+||++|+++|+++++.||+++|+|
T Consensus 401 ~~~~f~~~~~Gl~~g~lI~~iTeYyTs~~~~PV~~IA~aS~TG~ATnII~GlavGm~St~~Pvl~i~~ai~~sy~l~gly 480 (766)
T 4a01_A 401 SWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMY 480 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHHhCcCchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhheeccccccccCcchhHhhcCCChHHHHHhhhhhhcCCccccccchhhHHHHHHHHHHHHHHHH
Q 004230 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV 560 (766)
Q Consensus 481 GiAiAa~GMLst~~i~la~DayGPIaDNAgGIAEMs~l~~~VR~~tD~LDa~GNTTaAi~KGfAIGSAaL~aLaLf~ay~ 560 (766)
|+|+|++|||||++++|++|+||||+||||||||||+||||||||||+||++||||||++||||||||+|+||+||++|+
T Consensus 481 GiAlAa~GMLst~g~~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTaAi~KGfAIGSAaL~AlaLf~ay~ 560 (766)
T 4a01_A 481 GIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFV 560 (766)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhheeeeeccCCcccCcccHHHHccCcHHHHHHHHhhhhccCchhhhccchhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccCChhHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHh
Q 004230 561 SRAGITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIK 640 (766)
Q Consensus 561 ~~~~~~~~~l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPdY~~cV~I~T~~Alk 640 (766)
++.++..+|+.||+|++|+|+|+|+|||||+++|+||||+|++||||||||||||||||||++||||+||||||||+|||
T Consensus 561 ~~~~~~~~~l~~P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreipGImeg~~kPDY~rcV~I~T~aAlk 640 (766)
T 4a01_A 561 SRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIK 640 (766)
T ss_dssp HHTTCSCCBSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSSCCCHHHHHHHHHHHHHH
T ss_pred HHhccceeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHHHHHH
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcchhhHHHHhhHHHHHhhhhhhHHHHhhHHHHHHHHHHHHhhcccchhhhhhhHHhhcccccccccCCCCCccccccc
Q 004230 641 EMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAV 720 (766)
Q Consensus 641 eMi~Pgllavl~Pi~vG~~~G~~al~G~L~G~~vsG~~~Ai~m~NaGGAWDNAKKyIE~G~~~~~~~~ggKGS~aHkAaV 720 (766)
|||.|+++++++|+++|++||+++++|+|+|++++|++||+||+|+||||||||||||+|.++++.++||||||+|||||
T Consensus 641 eMi~Pgllav~~Pi~vG~~lG~~al~G~L~G~~vsGv~~Ai~maNaGGAWDNAKKyIE~G~~~~~~~~ggKGSeaHkAaV 720 (766)
T 4a01_A 641 EMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAV 720 (766)
T ss_dssp HTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHTTCSTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhccchhHHhHHHHHHccccccccccCCCCchhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999965555567999999999999
Q ss_pred cccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhccccccC
Q 004230 721 IGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 766 (766)
Q Consensus 721 vGDTVGDP~KDTaGPslniLIKlm~~vslv~ap~~~~~~~~~~~~~ 766 (766)
||||||||||||||||||||||+|++|||||+|+|.+|+|+++|++
T Consensus 721 vGDTVGDPfKDTsGPslNiLIKlm~ivsLv~ap~~~~~~g~~~~~~ 766 (766)
T 4a01_A 721 IGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 766 (766)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHC
T ss_pred cCCCCCCCccccccchHhHHHHHHHHHHHHHHHHHHHcCCeeeecC
Confidence 9999999999999999999999999999999999999888887764
No 2
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=100.00 E-value=7.6e-250 Score=2100.08 Aligned_cols=680 Identities=43% Similarity=0.700 Sum_probs=597.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCcchhhhhhcCCCchhhhHHHHHHHHHHHHhHHHhHHh
Q 004230 12 EILVPVCAVVGIIFSLVQWFIVSRVRLTHERPPSSNSDKKNGFNDYLIEEEEGINDQSVVAKCADIQSAISEGATSFLFT 91 (766)
Q Consensus 12 ~~~~~~~~~l~l~~a~~~~~~v~~~~~~~~~~~~~~~~~~~G~~~~l~~~~~g~~~~~~~~~m~eIa~~I~eGA~AfL~~ 91 (766)
..+.+++++++|+|++++++||+|+ |+| +||||||+++|||||++||+|
T Consensus 13 ~~l~~~~~i~~l~~a~~~~~~v~~~-------------------------~~G------~~~M~eIa~~I~eGA~afL~r 61 (735)
T 4av3_A 13 AALFFLIPLVALGFAAANFAAVVRK-------------------------PEG------TERMKEISSYIRSGADSFLAH 61 (735)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHTS-------------------------CC-------CHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-------------------------CCC------CHHHHHHHHHHHHHHHHHHHH
Confidence 3455667899999999999999884 458 999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcccCcccCCCcccccccccccchhhhhhHHHHHHHHHHHHHHHhhhHhhhhhhhhhHhh
Q 004230 92 EYQYVGVFMIAFAILIFVFLGSVEGFSTKGQACTYDQQKMCKPALATAAFSTVSFLLGAITSVLSGFLGMKIATYANART 171 (766)
Q Consensus 92 qyk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Fl~Ga~~S~laG~iGM~vAt~aN~Rt 171 (766)
|||++++|.++++++++++.+ |+++++|++|++||.+|||+|||+|||||+||
T Consensus 62 qyk~i~~~~vv~~~ll~~~~~---------------------------~~~ai~Fl~Ga~~S~~aGyiGM~vAt~ANvRT 114 (735)
T 4av3_A 62 ETKAIFKVAIVIAILLMIFTT---------------------------WQTGVAFLLGAVMSASAGIVGMKMATRANVRV 114 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh---------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998877543 47999999999999999999999999999999
Q ss_pred HHHHhh--ChhHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcCC-------------CchhhhHHHHhhchhhHH
Q 004230 172 TLEARK--SVGKAFIVAFRSGAVMGFLLAANGLLVLFIAINLFKLYYGD-------------DWEGLFEAITGYGLGGSS 236 (766)
Q Consensus 172 a~aA~~--~~~~al~vafr~G~VmGl~vvglgLl~l~~~~~~~~~~~~~-------------~~~~~~~~i~gfg~GaS~ 236 (766)
|+|||+ ++++||++|||||+||||+|+||+||+++++|++|..++++ +..+.++++.||+||+|+
T Consensus 115 A~AA~~s~~l~~aL~vAFrgGaVmGl~vvgl~Llgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gfg~GaS~ 194 (735)
T 4av3_A 115 AEAARTTKKIGPALKVAYQGGSVMGLSVGGFALLGLVLVYLIFGKWMGQVDNLNIYTNWLGINFVPFAMTVSGYALGCSI 194 (735)
T ss_dssp HHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHCSCEECTTSCEECHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCccHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccchhhhHHHhhhchhHHH
Confidence 999984 68999999999999999999999999999999998643321 123456789999999999
Q ss_pred HHHHHHHhcccccchhhccccccchhccCCCCCCCCCccccccccccccccccccchhhhhhHHHHHHHHHHHHHhhhcC
Q 004230 237 MALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFG 316 (766)
Q Consensus 237 iALFaRvGGGIyTKAADVGADLVGKVEagIPEDDPRNPavIADnVGDNVGD~AGmgADLfESy~~si~aamvlg~~~~~~ 316 (766)
+|||+||||||||||||||||||||||+|||||||||||||||||||||||||||||||||||+++++|+|+|++.....
T Consensus 195 iALFaRvGGGIyTKaADVGADLVGKVEagIPEDDPRNPAvIADNVGDNVGDvAGMgADLFESY~~sivAamvL~~~~~~~ 274 (735)
T 4av3_A 195 IAMFDRVGGGVYTKAADMAADLVGKTELNLPEDDPRNPATIADNVGDNVGDVAGLGADLLESFVGAIVSSIILASYMFPI 274 (735)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTTSCC-----------CCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcceeccccccchhhhhhhcCCCCCCCCCCchhhhhcccccccccccccchHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999864210
Q ss_pred C------c--------cccchhHHHHHHHHHHHHHHHHHHhhhhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHh
Q 004230 317 I------N--------HEFTSMLYPLLISSIGILVCLITTLFATDIFEVKAVKEIEPSLKKQLIISTVLMTVGIAIVSWI 382 (766)
Q Consensus 317 ~------~--------~~~~~v~~Pl~i~a~gil~siig~~~~~~~~~~~~~~~~~~aL~~g~~~s~il~~i~~~~~~~~ 382 (766)
. + .....++|||+++++|+++|++|++++|. .+++++++++|++++|+++++++++.++++++
T Consensus 275 ~~~~~g~~~~~~~~~~~~~~~~~~Pl~i~~~gii~SiiG~~~v~~---~~~~~~~~~~l~~~~~~s~~~s~i~~~~~~~~ 351 (735)
T 4av3_A 275 YVQKIGENLVHQVPKETIQALISYPIFFALVGLGCSMLGILYVIV---KKPSDNPQRELNISLWTSALLTVVLTAFLTYF 351 (735)
T ss_dssp TEEEETTEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhheeee---cccccchhHHHhhhHHhhHHHHHHHHHHHHHH
Confidence 0 0 01224789999999999999999999752 23467899999999999999999999999999
Q ss_pred hcCccccccccccccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCcchhHHHHhhcccCchhHHHHHhhhhhhhhHHH
Q 004230 383 GLPSSFTIYNFGAQKVVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIP 462 (766)
Q Consensus 383 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~Gl~~g~lI~~~TeYyTs~~y~PVr~IA~as~tG~AtnII~Gla~Gm~St~~p 462 (766)
+++....... ......+|++|+|+++|+++|++|+++||||||++|||||+|||+|+||||||||+||++||+||++|
T Consensus 352 ~l~~~~~~~~--~~~~~~~~~~f~~~~iGlv~g~lI~~iTEYYTs~~~~PVr~IA~aS~TG~ATnII~GLavGm~St~~p 429 (735)
T 4av3_A 352 YLKDLQGLDV--LGFRFGAISPWFSAIIGIFSGILIGFWAEYYTSYRYKPTQFLGKSSIEGTGMVISNGLSLGMKSVFPP 429 (735)
T ss_dssp HHTTCSSHHH--HTCTTGGGHHHHHHHHHHHHHHHHHHHHHHHHCTTSHHHHHHHHHGGGCHHHHHHHHHHHHHHHTHHH
T ss_pred Hhhhhhhccc--ccccccchHHHHHHHHHHHHHHHHHHheeeecCCCCchHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9886332211 11235678999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhheeccccccccCcchhHhhcCCChHHHHHhhhhhhcCCccccccch
Q 004230 463 IFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKG 542 (766)
Q Consensus 463 vl~i~~ai~~sy~l~GlyGiAiAa~GMLst~~i~la~DayGPIaDNAgGIAEMs~l~~~VR~~tD~LDa~GNTTaAi~KG 542 (766)
+++|+++++.||+++|+||+|+|++|||||+++++++|+||||+||||||||||+||||||||||+||++||||||++||
T Consensus 430 vl~I~~~I~~s~~~aGlyGiaiAa~GMLst~gi~lAvDayGPIaDNAGGIAEMs~l~~eVR~~TD~LDavGNTTkAi~KG 509 (735)
T 4av3_A 430 TLTLVLGILFADYFAGLYGVAIAALGMLSFVATSVSVDSYGPIADNAGGISEMCELDPEVRKITDHLDAVGNTTAAIGKG 509 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccceEeeecccCccCCccchHHHccCChHHHHhhhccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhh-----------cccccccCChhHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHh
Q 004230 543 FAIGSAALVSLALFGAFVSRA-----------GITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQ 611 (766)
Q Consensus 543 fAIGSAaL~aLaLf~ay~~~~-----------~~~~~~l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA~~mV~EVRRQ 611 (766)
||||||+|+||+||++|+++. ....+|+.||+|++|+|+|+|+|||||+++|+||||+|++||||||||
T Consensus 510 fAIGSAaL~AlaLfaay~~~~~~~~~~~~~~~~~~~~~l~~P~VlvGlliGgmlpflFsaltm~AVgrAA~~mV~EVRRQ 589 (735)
T 4av3_A 510 FAIGSAIFAALSLFASYMFSQISPSDIGKPPSLVLLLNMLDARVIAGALLGAAITYYFSGYLISAVTKAAMKMVDEIRRQ 589 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGSSSCGGGTSCCBTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred hhHhHHHHHHHHHHHHHHHHHhhhhhhccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998542 123489999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCCCCCChhhHHHHHHHHHHhhhcchhhHHHHhhHHHHHhhhhhhHHHHhhHHHHHHHHHHHHhhcccchhh
Q 004230 612 FNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWD 691 (766)
Q Consensus 612 FreipGi~eg~~kPdY~~cV~I~T~~AlkeMi~Pgllavl~Pi~vG~~~G~~al~G~L~G~~vsG~~~Ai~m~NaGGAWD 691 (766)
|||||||||||+||||+||||||||+|||||++|+++++++|+++|+++|+++++|+|+|++++|++||+||+|+|||||
T Consensus 590 FreipGimeg~~kPdy~~cV~I~T~~AlkeMi~p~~l~v~~P~~vg~~~g~~~l~g~L~g~~v~G~~~Ai~m~n~GGAWD 669 (735)
T 4av3_A 590 AREIPGLLEGKAKPDYNRCIEITSDNALKQMGYPAFIAILTPLVTGFLLGAEFVGGVLIGTVLSGAMLAILTANSGGAWD 669 (735)
T ss_dssp ---------------CHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCcccCCCCCChHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCccHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHhhcccccccccCCCCCccccccccccccCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHhh
Q 004230 692 NAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATH 758 (766)
Q Consensus 692 NAKKyIE~G~~~~~~~~ggKGS~aHkAaVvGDTVGDP~KDTaGPslniLIKlm~~vslv~ap~~~~~ 758 (766)
|||||||+|+++ .+|||||+|||||||||||||||||||||||||||+|++||||++|+|.+.
T Consensus 670 NAKK~iE~G~~g----~~gKgS~aHkAaVvGDTVGDPfKDTsGPslN~lIKl~~~vslv~ap~~~~~ 732 (735)
T 4av3_A 670 NAKKYLEAGNLE----GYGKGSEPHKALVIGDTVGDPLKDTVGPSLDILIKIMSVVSVIAVSIFKHV 732 (735)
T ss_dssp HHHHHHHTSCSS----SCCSSSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhhccCCCC----CCCCCChhhcCcccCCCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999861 228999999999999999999999999999999999999999999999875
No 3
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.98 E-value=39 Score=29.21 Aligned_cols=39 Identities=13% Similarity=0.464 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhccCCCCCC----CCCCCChhhHHHHHHHHHHh
Q 004230 602 LKMVEEVRRQFNTIPGLME----GTTKPDYATCVKISTDASIK 640 (766)
Q Consensus 602 ~~mV~EVRRQFreipGi~e----g~~kPdY~~cV~I~T~~Alk 640 (766)
++|++|+|+.|-|+|--.- -+..-+-+.|.++-+|-+=|
T Consensus 11 ~qvfheLkQrFPEvPd~VVsqc~~qN~~Nl~aC~~~L~qES~k 53 (75)
T 2dae_A 11 FQVLHDLRQKFPEVPEVVVSRCMLQNNNNLDACCAVLSQESTR 53 (75)
T ss_dssp HHHHHHHHHHSSSSCHHHHHHHHTTTTSCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcHHHHHHHHHHhccCHHHHHHHHHHhccc
Confidence 5799999999999983210 13466778999998887765
No 4
>4av3_A K(+)-stimulated pyrophosphate-energized sodium PU; hydrolase, membrane pyrophosphotase, ION pump; 2.60A {Thermotoga maritima} PDB: 4av6_A
Probab=27.63 E-value=5.4e+02 Score=30.55 Aligned_cols=78 Identities=19% Similarity=0.308 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcccCCcchhHHHHhhcccCchhHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 004230 402 WQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYG 481 (766)
Q Consensus 402 ~~~~~~~~~Gl~~g~lI~~~TeYyTs~~y~PVr~IA~as~tG~AtnII~Gla~Gm~St~~pvl~i~~ai~~sy~l~GlyG 481 (766)
|..-.|.++|-+.+.+-||+-=+= + .+.-| +.|++++++... .-+.=+||.-+.+-|
T Consensus 83 ~~~ai~Fl~Ga~~S~~aGyiGM~v-A-t~ANv-RTA~AA~~s~~l--------------------~~aL~vAFrgGaVmG 139 (735)
T 4av3_A 83 WQTGVAFLLGAVMSASAGIVGMKM-A-TRANV-RVAEAARTTKKI--------------------GPALKVAYQGGSVMG 139 (735)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHH-HHHHHTTTTCSS--------------------HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHH-HHHHHHhhcCCc--------------------cHHHHhhhccchHHH
Confidence 445567788888888877765442 1 12223 356666543111 112334577777888
Q ss_pred HHHHHHHHhhhhhhhheeccc
Q 004230 482 IAVAALGMLSTIATGLAIDAY 502 (766)
Q Consensus 482 iAiAa~GMLst~~i~la~Day 502 (766)
..++.+|.|....+.+-...+
T Consensus 140 l~vvgl~Llgl~~~~~~~~~~ 160 (735)
T 4av3_A 140 LSVGGFALLGLVLVYLIFGKW 160 (735)
T ss_dssp HHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 888888888777666654333
No 5
>4f0a_B Protein WNT-8, XWNT-8; WNT signaling, ligand-receptor complex, frizzled, fatty acylation, glycosylation, signaling protein; HET: NAG BMA MAN FUC PAM; 3.25A {Xenopus laevis}
Probab=25.94 E-value=41 Score=35.87 Aligned_cols=23 Identities=30% Similarity=0.211 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhccC
Q 004230 593 TMKSVGSAALKMVEEVRRQFNTI 615 (766)
Q Consensus 593 ~m~aVg~aA~~mV~EVRRQFrei 615 (766)
.|.+|+++|..-++|++.|||..
T Consensus 18 ~~~~v~~Ga~~~i~ECq~QFr~~ 40 (316)
T 4f0a_B 18 YSASVAVGAQNGIEECKYQFAWE 40 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Confidence 58899999999999999999965
No 6
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA replication, nucleus, phosphoprote binding protein; HET: DNA; NMR {Homo sapiens}
Probab=22.99 E-value=9.2 Score=34.80 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=26.8
Q ss_pred hhhHHHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHh
Q 004230 582 GAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIK 640 (766)
Q Consensus 582 G~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPdY~~cV~I~T~~Alk 640 (766)
|..+-.+|-+-.|.+|. .+++++||.|. ||-= +..-.+||+++|.++.+.
T Consensus 11 ~~~~~~~~~~~~~~~Vs------ae~L~eEfdef-Gi~~--~d~VldKc~ELC~~y~ld 60 (101)
T 2keb_A 11 GSSLEVLFQGPGSMSAS------AQQLAEELQIF-GLDC--EEALIEKLVELCVQYGQN 60 (101)
T ss_dssp -------------CCCC------HHHHHHHHHHH-TCBC--CHHHHHHHHHHHHHHTCC
T ss_pred CccchheeeCCchhhcc------HHHHHHHHHHc-CCCC--CHHHHHHHHHHHHHcCCC
Confidence 55666778877777776 58999999985 3310 113479999999988774
No 7
>3hd7_A Vesicle-associated membrane protein 2; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_A 3ipd_A
Probab=21.51 E-value=1.9e+02 Score=25.24 Aligned_cols=40 Identities=10% Similarity=0.226 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHhHHH----hHHhhhhhHHHHHHHHHHHHHHH
Q 004230 71 VAKCADIQSAISEGATS----FLFTEYQYVGVFMIAFAILIFVF 110 (766)
Q Consensus 71 ~~~m~eIa~~I~eGA~A----fL~~qyk~i~~~~~~~~~~l~~~ 110 (766)
++.+++-|+.-+..|.. +..+.||...++++++.++++++
T Consensus 42 t~~L~~~s~~F~~~A~~l~rkmwwkn~K~~iii~~iv~~il~ii 85 (91)
T 3hd7_A 42 ADALQAGASQFETSAAKLKRKYWWKNLKMMIILGVICAIILIII 85 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555443 45566788777666666555443
No 8
>3din_C Preprotein translocase subunit SECY; protein translocation, membrane protein, ATPase, ATP-binding membrane, nucleotide-binding, protein transport; HET: ADP; 4.50A {Thermotoga maritima MSB8}
Probab=21.21 E-value=81 Score=34.94 Aligned_cols=88 Identities=18% Similarity=0.300 Sum_probs=55.2
Q ss_pred cCChhHHHHHHhhhhHHHHHHHHhHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHHhhhcchhhHH
Q 004230 570 VLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTTKPDYATCVKISTDASIKEMIPPGALV 649 (766)
Q Consensus 570 l~~p~Vl~GlliG~~lpflFsal~m~aVg~aA~~mV~EVRRQFreipGi~eg~~kPdY~~cV~I~T~~AlkeMi~Pglla 649 (766)
..+|.-..+.++=..+.++||-+- .++.-...|+-|+.|||=--|||+..|++.-|| --++.+|.++-.-+.-++++
T Consensus 298 ~~~~~~~~y~~~y~~lii~Fs~fy-~~i~~np~diA~~lkk~G~~IpGiRpG~~T~~y--L~~vi~rit~~Ga~~L~~ia 374 (431)
T 3din_C 298 LFRAGGFLYLLIYGLLVFFFTYFY-SVVIFDPREISENIRKYGGYIPGLRPGRSTEQY--LHRVLNRVTFIGAVFLVVIA 374 (431)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHH-HTCTTHHHHHTTSCCCCBCSSCCCCCTTHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHCCCcCCCCCCChhHHHH--HHHHHHHHHHHhHHHHHHHH
Confidence 456665566666556666666543 344455555666666665569999988544444 44556666666666777777
Q ss_pred HHhhHHHHHhhh
Q 004230 650 MLTPLIVGIFFG 661 (766)
Q Consensus 650 vl~Pi~vG~~~G 661 (766)
++ |.+++..+|
T Consensus 375 vl-p~~~~~~~g 385 (431)
T 3din_C 375 LL-PYLVQGAIK 385 (431)
T ss_dssp HH-HHHHTTTSC
T ss_pred HH-HHHHHHHhC
Confidence 65 777765555
No 9
>3fss_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; 1.43A {Saccharomyces cerevisiae} PDB: 3tw1_A* 3tvv_A* 3gyp_A 3gyo_A 3to1_A
Probab=18.30 E-value=84 Score=32.47 Aligned_cols=32 Identities=28% Similarity=0.591 Sum_probs=25.8
Q ss_pred HHHHHhhccCCCCCCCCCCCChhhHHHHHHHHHH
Q 004230 606 EEVRRQFNTIPGLMEGTTKPDYATCVKISTDASI 639 (766)
Q Consensus 606 ~EVRRQFreipGi~eg~~kPdY~~cV~I~T~~Al 639 (766)
|.+..||.+ .|.++.+.+ ||++|+|-..|-+.
T Consensus 99 ~~~~kq~~~-~g~~~~~~~-~f~~~i~~~~rQ~~ 130 (237)
T 3fss_A 99 ENTLNQFKK-LGLLDSNVT-DFEKCVEYIRKQAI 130 (237)
T ss_dssp HHHHHHHHH-TTSSCTTCC-CTHHHHHHHHHHHH
T ss_pred HHhhhhhhh-cCCCcccch-hHHHHHHHHHHHHh
Confidence 457899998 588888777 99999999866554
No 10
>4a01_A Proton pyrophosphatase; hydrolase, membrane protein, proton pumping; HET: DMU; 2.35A {Vigna radiata}
Probab=17.24 E-value=9.1e+02 Score=28.83 Aligned_cols=143 Identities=20% Similarity=0.310 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHHHHHhhhHhhhhhhhhhHhhHHHHhhC---------------hhHHHHhhccccchhHHHHHHHHHHH
Q 004230 140 AFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKS---------------VGKAFIVAFRSGAVMGFLLAANGLLV 204 (766)
Q Consensus 140 ~~~~i~Fl~Ga~~S~laG~iGM~vAt~aN~Rta~aA~~~---------------~~~al~vafr~G~VmGl~vvglgLl~ 204 (766)
+.+.+..++|+..-.+=.-..|+.=.|+--|..+.-||- +.+..+++-|+ +.-.|.+-++--..
T Consensus 573 P~Vl~GlliG~mlpflFsa~tm~AVg~AA~~mV~EVRRQFreipGImeg~~kPDY~rcV~I~T~a-AlkeMi~Pgllav~ 651 (766)
T 4a01_A 573 PKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDA-SIKEMIPPGALVML 651 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTTTTSSCCCHHHHHHHHHHH-HHHHTHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCCChHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 467888899998888877777887777777776665542 33445544332 22222222211110
Q ss_pred HHHHH-HHHhhhcCCCchhhhHHHHhhchhhHHHHHHHHHhcccccchhhccccccchhccCC---------CCCCCCCc
Q 004230 205 LFIAI-NLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNI---------PEDDPRNP 274 (766)
Q Consensus 205 l~~~~-~~~~~~~~~~~~~~~~~i~gfg~GaS~iALFaRvGGGIyTKAADVGADLVGKVEagI---------PEDDPRNP 274 (766)
.-++. +++ + ++.+--.+.|--.-+-++|+|.--+||-+-+|=.. +|.|- +-.|+...
T Consensus 652 ~Pi~vG~~l----G--~~al~G~L~G~~vsGv~~Ai~maNaGGAWDNAKKy-------IE~G~~~~~~~~ggKGSeaHkA 718 (766)
T 4a01_A 652 TPLVVGILF----G--VETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKY-------IEAGASEHARSLGPKGSDCHKA 718 (766)
T ss_dssp HHHHHHHHT----C--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHCCSHHHHTTCSTTSHHHHH
T ss_pred HHHHHHHHh----h--HHHHHHHHHHHHHHHHHHHHHHhccchhHHhHHHH-------HHccccccccccCCCCchhhcc
Confidence 11111 111 1 11112334455555668899999999999766542 57662 22355567
Q ss_pred cccccccccccccccccchhhh
Q 004230 275 AVIADNVGDNVGDIAGMGSDLF 296 (766)
Q Consensus 275 avIADnVGDNVGD~AGmgADLf 296 (766)
+|+.|.|||=-=|-+|..-+.-
T Consensus 719 aVvGDTVGDPfKDTsGPslNiL 740 (766)
T 4a01_A 719 AVIGDTIGDPLKDTSGPSLNIL 740 (766)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHH
T ss_pred cccCCCCCCCccccccchHhHH
Confidence 9999999999888888876643
Done!