Query 004232
Match_columns 766
No_of_seqs 779 out of 5703
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 19:50:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004232.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004232hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.6E-76 3.4E-81 728.1 53.8 678 26-755 26-953 (968)
2 KOG1187 Serine/threonine prote 100.0 5.8E-54 1.3E-58 461.3 26.7 279 469-755 61-354 (361)
3 KOG0192 Tyrosine kinase specif 100.0 5.5E-44 1.2E-48 381.0 23.2 248 487-755 45-305 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 3.9E-44 8.4E-49 379.9 17.2 246 485-755 208-463 (468)
5 KOG1026 Nerve growth factor re 100.0 3E-43 6.4E-48 390.4 16.1 255 482-759 485-768 (774)
6 KOG0196 Tyrosine kinase, EPH ( 100.0 6.2E-42 1.3E-46 371.6 12.4 245 486-755 632-893 (996)
7 KOG0581 Mitogen-activated prot 100.0 1.2E-40 2.6E-45 337.8 18.1 249 473-749 76-335 (364)
8 KOG0595 Serine/threonine-prote 100.0 1.7E-39 3.8E-44 331.7 19.9 193 482-688 9-217 (429)
9 KOG0575 Polo-like serine/threo 100.0 4.4E-39 9.5E-44 344.4 20.3 240 483-749 18-269 (592)
10 KOG0194 Protein tyrosine kinas 100.0 1.4E-39 3.1E-44 351.0 16.6 262 474-759 148-426 (474)
11 KOG1095 Protein tyrosine kinas 100.0 6.8E-39 1.5E-43 368.4 20.4 249 484-755 693-963 (1025)
12 KOG0193 Serine/threonine prote 100.0 9.4E-39 2E-43 339.8 15.9 259 473-755 382-655 (678)
13 KOG0615 Serine/threonine prote 100.0 1.8E-38 4E-43 323.4 15.4 243 483-749 172-437 (475)
14 KOG4278 Protein tyrosine kinas 100.0 8.9E-39 1.9E-43 337.4 12.9 255 476-755 260-525 (1157)
15 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.6E-37 5.6E-42 335.1 20.6 253 482-755 6-336 (338)
16 KOG0591 NIMA (never in mitosis 100.0 1.6E-38 3.4E-43 308.5 9.1 252 483-752 19-284 (375)
17 PHA02988 hypothetical protein; 100.0 1.2E-36 2.5E-41 321.3 24.2 259 471-755 13-281 (283)
18 KOG0593 Predicted protein kina 100.0 2.3E-37 5E-42 303.3 16.5 252 483-748 2-283 (396)
19 KOG1094 Discoidin domain recep 100.0 1.2E-37 2.7E-42 328.1 15.3 252 483-753 538-804 (807)
20 KOG4721 Serine/threonine prote 100.0 5E-38 1.1E-42 329.5 11.4 233 488-753 129-368 (904)
21 KOG0198 MEKK and related serin 100.0 1E-36 2.3E-41 315.2 18.9 248 484-752 18-279 (313)
22 KOG0598 Ribosomal protein S6 k 100.0 7.7E-37 1.7E-41 310.1 16.7 234 482-741 24-269 (357)
23 KOG0600 Cdc2-related protein k 100.0 1.5E-36 3.2E-41 316.9 18.2 255 482-748 116-399 (560)
24 KOG4257 Focal adhesion tyrosin 100.0 9.1E-37 2E-41 323.1 14.7 246 484-755 390-651 (974)
25 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-35 3.2E-40 316.4 22.0 251 483-751 5-303 (304)
26 cd05104 PTKc_Kit Catalytic dom 100.0 3.1E-36 6.8E-41 330.7 17.0 251 481-753 33-374 (375)
27 KOG0592 3-phosphoinositide-dep 100.0 5.6E-36 1.2E-40 315.0 17.4 244 479-749 69-338 (604)
28 KOG0661 MAPK related serine/th 100.0 1.1E-36 2.5E-41 315.5 10.8 255 482-749 9-291 (538)
29 KOG0659 Cdk activating kinase 100.0 2.1E-35 4.7E-40 285.1 17.5 249 484-749 3-281 (318)
30 cd05106 PTKc_CSF-1R Catalytic 100.0 9.7E-36 2.1E-40 326.6 16.8 252 481-754 36-373 (374)
31 cd05108 PTKc_EGFR Catalytic do 100.0 5.2E-35 1.1E-39 313.9 21.9 247 483-755 7-270 (316)
32 KOG1025 Epidermal growth facto 100.0 4.6E-36 9.9E-41 326.8 13.3 241 488-754 701-958 (1177)
33 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.6E-35 1.4E-39 303.2 21.1 242 483-750 4-255 (256)
34 PF07714 Pkinase_Tyr: Protein 100.0 1.2E-35 2.6E-40 309.4 15.3 240 487-750 3-259 (259)
35 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.7E-35 1.2E-39 305.6 20.1 246 483-753 5-265 (266)
36 KOG0580 Serine/threonine prote 100.0 1.1E-35 2.4E-40 283.1 12.8 243 482-749 21-273 (281)
37 KOG0583 Serine/threonine prote 100.0 1.3E-34 2.7E-39 312.3 21.2 241 481-747 15-273 (370)
38 KOG0582 Ste20-like serine/thre 100.0 9E-35 1.9E-39 299.2 18.6 251 482-749 25-293 (516)
39 cd05093 PTKc_TrkB Catalytic do 100.0 2.2E-34 4.7E-39 304.9 21.9 252 483-757 5-283 (288)
40 KOG0578 p21-activated serine/t 100.0 4.9E-35 1.1E-39 311.0 16.4 242 483-749 273-523 (550)
41 KOG0199 ACK and related non-re 100.0 2.2E-35 4.8E-40 316.4 13.8 240 486-750 113-369 (1039)
42 cd05054 PTKc_VEGFR Catalytic d 100.0 1.7E-34 3.6E-39 312.5 20.7 252 483-755 7-335 (337)
43 cd05072 PTKc_Lyn Catalytic dom 100.0 2.3E-34 4.9E-39 300.0 20.7 245 483-752 6-260 (261)
44 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.2E-34 4.7E-39 304.1 20.8 257 485-754 6-282 (283)
45 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.7E-35 2.1E-39 320.1 18.8 252 481-754 35-398 (400)
46 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.7E-34 3.6E-39 300.9 19.2 249 480-752 3-260 (261)
47 cd05033 PTKc_EphR Catalytic do 100.0 6.1E-34 1.3E-38 297.7 23.5 246 483-753 4-265 (266)
48 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-34 3.2E-39 305.4 19.0 260 483-753 4-283 (284)
49 cd05089 PTKc_Tie1 Catalytic do 100.0 5.2E-34 1.1E-38 303.4 23.1 254 483-759 2-281 (297)
50 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-34 7.2E-39 303.0 21.4 243 485-749 2-261 (285)
51 cd05094 PTKc_TrkC Catalytic do 100.0 3.4E-34 7.4E-39 303.9 21.5 250 483-755 5-284 (291)
52 KOG1989 ARK protein kinase fam 100.0 1.1E-34 2.4E-39 324.1 18.3 259 482-759 36-317 (738)
53 cd05111 PTK_HER3 Pseudokinase 100.0 4.3E-34 9.4E-39 301.2 21.8 247 483-755 7-270 (279)
54 cd05068 PTKc_Frk_like Catalyti 100.0 4.2E-34 9.1E-39 298.1 21.2 246 482-752 5-260 (261)
55 cd05088 PTKc_Tie2 Catalytic do 100.0 4.8E-34 1E-38 304.6 22.1 259 482-763 6-290 (303)
56 cd05052 PTKc_Abl Catalytic dom 100.0 4.1E-34 8.9E-39 298.5 20.9 246 483-753 6-262 (263)
57 KOG0585 Ca2+/calmodulin-depend 100.0 1.4E-34 3.1E-39 299.4 17.0 247 480-750 94-373 (576)
58 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.2E-34 4.7E-39 299.4 18.7 243 483-751 4-256 (256)
59 cd06649 PKc_MEK2 Catalytic dom 100.0 4.6E-34 1E-38 308.6 21.8 192 483-687 5-204 (331)
60 cd05090 PTKc_Ror1 Catalytic do 100.0 4.9E-34 1.1E-38 301.4 21.2 246 483-751 5-281 (283)
61 cd05075 PTKc_Axl Catalytic dom 100.0 7.7E-34 1.7E-38 297.8 22.3 251 486-753 2-271 (272)
62 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.5E-34 9.8E-39 309.0 20.9 248 483-749 1-257 (333)
63 KOG0616 cAMP-dependent protein 100.0 1.8E-34 3.8E-39 282.7 15.8 194 482-689 43-245 (355)
64 cd05035 PTKc_Axl_like Catalyti 100.0 1E-33 2.2E-38 296.9 22.9 252 485-753 1-272 (273)
65 cd05053 PTKc_FGFR Catalytic do 100.0 7.6E-34 1.6E-38 301.4 21.9 251 481-754 10-292 (293)
66 KOG2052 Activin A type IB rece 100.0 6.5E-34 1.4E-38 292.7 20.4 261 482-757 210-507 (513)
67 PLN00034 mitogen-activated pro 100.0 4E-34 8.6E-39 312.0 20.1 238 484-749 75-328 (353)
68 cd05612 STKc_PRKX_like Catalyt 100.0 2.2E-34 4.8E-39 305.3 17.6 240 483-749 1-254 (291)
69 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-33 2.5E-38 295.7 22.7 251 483-753 2-265 (267)
70 cd05084 PTKc_Fes Catalytic dom 100.0 7.4E-34 1.6E-38 294.5 21.0 238 489-751 1-251 (252)
71 cd05048 PTKc_Ror Catalytic Dom 100.0 6.8E-34 1.5E-38 300.1 21.0 247 483-752 5-282 (283)
72 cd05043 PTK_Ryk Pseudokinase d 100.0 7.8E-34 1.7E-38 299.3 21.2 252 482-755 5-278 (280)
73 cd06650 PKc_MEK1 Catalytic dom 100.0 9.4E-34 2E-38 306.3 22.1 192 483-687 5-204 (333)
74 cd05571 STKc_PKB Catalytic dom 100.0 6E-34 1.3E-38 306.6 20.3 233 489-748 1-250 (323)
75 PTZ00263 protein kinase A cata 100.0 4.5E-34 9.8E-39 308.3 19.3 241 482-749 17-271 (329)
76 KOG0597 Serine-threonine prote 100.0 1.6E-34 3.5E-39 303.6 15.2 239 483-749 2-251 (808)
77 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.5E-34 1.8E-38 308.0 21.5 253 483-756 7-342 (343)
78 cd05062 PTKc_IGF-1R Catalytic 100.0 5.5E-34 1.2E-38 300.0 19.4 248 481-751 4-276 (277)
79 KOG0605 NDR and related serine 100.0 3.6E-34 7.8E-39 301.9 17.8 238 481-742 139-435 (550)
80 cd05049 PTKc_Trk Catalytic dom 100.0 9E-34 1.9E-38 298.7 20.7 246 483-751 5-279 (280)
81 cd05109 PTKc_HER2 Catalytic do 100.0 1E-33 2.2E-38 298.3 21.0 252 483-760 7-275 (279)
82 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.6E-34 5.7E-39 316.5 17.0 252 481-754 35-400 (401)
83 cd05116 PTKc_Syk Catalytic dom 100.0 1.3E-33 2.8E-38 293.7 20.9 236 490-752 2-254 (257)
84 KOG0658 Glycogen synthase kina 100.0 8.6E-35 1.9E-39 294.5 11.2 255 484-749 25-306 (364)
85 cd05115 PTKc_Zap-70 Catalytic 100.0 1.6E-33 3.5E-38 293.1 21.1 237 491-753 3-255 (257)
86 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-33 2.6E-38 297.9 20.3 246 483-751 5-279 (280)
87 cd05045 PTKc_RET Catalytic dom 100.0 1.6E-33 3.5E-38 298.6 21.3 249 484-755 1-288 (290)
88 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.5E-33 3.3E-38 294.9 20.9 246 483-753 5-267 (268)
89 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-33 2.6E-38 293.8 19.9 241 484-750 5-255 (256)
90 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.7E-33 3.7E-38 293.3 20.9 244 483-752 6-259 (260)
91 cd05097 PTKc_DDR_like Catalyti 100.0 1.6E-33 3.6E-38 299.3 21.1 251 483-751 5-294 (295)
92 cd05082 PTKc_Csk Catalytic dom 100.0 1.6E-33 3.5E-38 292.8 20.5 244 483-752 6-255 (256)
93 cd08229 STKc_Nek7 Catalytic do 100.0 1.7E-33 3.7E-38 294.4 20.7 252 483-754 2-266 (267)
94 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.7E-33 3.6E-38 295.8 20.7 234 490-750 2-273 (274)
95 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-33 2.6E-38 302.7 19.8 228 491-745 1-240 (312)
96 cd05071 PTKc_Src Catalytic dom 100.0 2E-33 4.3E-38 293.2 20.9 245 483-753 6-260 (262)
97 cd05095 PTKc_DDR2 Catalytic do 100.0 2.3E-33 5E-38 298.3 21.5 253 483-752 5-296 (296)
98 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5E-33 1.1E-37 291.4 23.4 244 489-751 1-268 (269)
99 KOG0611 Predicted serine/threo 100.0 5E-34 1.1E-38 288.7 15.1 239 483-749 53-303 (668)
100 PTZ00267 NIMA-related protein 100.0 1.2E-33 2.7E-38 319.6 20.1 242 485-749 69-323 (478)
101 KOG2345 Serine/threonine prote 100.0 8.4E-34 1.8E-38 271.4 15.3 258 483-753 21-300 (302)
102 cd05595 STKc_PKB_beta Catalyti 100.0 1.7E-33 3.6E-38 303.1 19.7 233 489-748 1-250 (323)
103 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.2E-33 9.1E-38 291.2 22.1 252 483-754 2-266 (267)
104 PTZ00426 cAMP-dependent protei 100.0 1.3E-33 2.8E-38 305.6 18.8 241 482-749 29-284 (340)
105 cd05058 PTKc_Met_Ron Catalytic 100.0 3.9E-33 8.5E-38 290.8 21.7 242 489-754 1-260 (262)
106 cd05065 PTKc_EphR_B Catalytic 100.0 3.5E-33 7.6E-38 292.5 21.3 245 484-753 5-268 (269)
107 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.8E-33 3.8E-38 298.0 19.2 252 483-748 5-284 (288)
108 cd05039 PTKc_Csk_like Catalyti 100.0 3.9E-33 8.5E-38 289.8 21.3 244 483-752 6-255 (256)
109 cd05047 PTKc_Tie Catalytic dom 100.0 4.6E-33 9.9E-38 291.9 22.0 243 489-754 1-269 (270)
110 cd08529 STKc_FA2-like Catalyti 100.0 5.4E-33 1.2E-37 288.5 22.2 242 484-749 1-253 (256)
111 cd05626 STKc_LATS2 Catalytic d 100.0 2.8E-33 6E-38 308.4 21.1 243 484-749 2-305 (381)
112 cd05593 STKc_PKB_gamma Catalyt 100.0 3.1E-33 6.7E-38 301.6 21.0 234 489-749 1-251 (328)
113 cd05067 PTKc_Lck_Blk Catalytic 100.0 3.5E-33 7.7E-38 290.9 20.7 245 482-752 5-259 (260)
114 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.6E-33 9.9E-38 297.2 22.0 253 482-757 14-300 (304)
115 KOG0588 Serine/threonine prote 100.0 1.1E-33 2.4E-38 303.5 17.0 246 483-755 12-269 (786)
116 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.3E-33 7.1E-38 298.7 20.8 251 483-756 18-302 (307)
117 cd07848 STKc_CDKL5 Catalytic d 100.0 3E-33 6.5E-38 295.9 20.2 252 483-748 1-283 (287)
118 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.1E-33 4.5E-38 299.7 19.1 252 482-748 4-287 (303)
119 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.4E-33 5.3E-38 295.1 19.3 248 482-752 5-277 (277)
120 PTZ00283 serine/threonine prot 100.0 1.4E-33 3.1E-38 319.2 18.7 256 479-749 28-297 (496)
121 cd05066 PTKc_EphR_A Catalytic 100.0 4.3E-33 9.4E-38 291.5 20.9 246 483-753 4-266 (267)
122 cd05091 PTKc_Ror2 Catalytic do 100.0 2E-33 4.4E-38 296.6 18.4 245 484-751 6-281 (283)
123 KOG0663 Protein kinase PITSLRE 100.0 8.9E-34 1.9E-38 281.7 14.4 254 482-749 75-361 (419)
124 cd06646 STKc_MAP4K5 Catalytic 100.0 2.1E-33 4.6E-38 293.7 18.2 246 483-750 9-266 (267)
125 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5E-33 1.1E-37 293.5 21.2 250 484-753 5-283 (284)
126 cd05060 PTKc_Syk_like Catalyti 100.0 5.9E-33 1.3E-37 288.7 21.4 239 489-754 1-256 (257)
127 cd05051 PTKc_DDR Catalytic dom 100.0 7.6E-33 1.6E-37 294.1 22.5 253 482-751 4-295 (296)
128 cd05628 STKc_NDR1 Catalytic do 100.0 2.8E-33 6E-38 306.4 19.6 244 483-749 1-293 (363)
129 cd05061 PTKc_InsR Catalytic do 100.0 4E-33 8.6E-38 295.2 20.2 251 481-754 4-279 (288)
130 cd05085 PTKc_Fer Catalytic dom 100.0 7.4E-33 1.6E-37 286.6 21.8 238 489-751 1-249 (250)
131 cd06624 STKc_ASK Catalytic dom 100.0 5.6E-33 1.2E-37 290.8 20.8 250 478-748 3-264 (268)
132 KOG0660 Mitogen-activated prot 100.0 2.1E-33 4.7E-38 283.8 16.9 256 483-749 22-310 (359)
133 cd05599 STKc_NDR_like Catalyti 100.0 2.5E-33 5.4E-38 307.1 18.9 242 483-748 1-295 (364)
134 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.2E-33 7E-38 303.0 19.6 256 484-749 1-290 (338)
135 cd05055 PTKc_PDGFR Catalytic d 100.0 2.2E-33 4.7E-38 299.3 17.9 249 482-753 34-301 (302)
136 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.5E-33 1.4E-37 289.4 21.0 235 489-750 1-261 (262)
137 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.1E-33 6.8E-38 304.7 19.1 243 483-749 1-285 (350)
138 KOG0694 Serine/threonine prote 100.0 2.1E-33 4.5E-38 304.1 17.3 235 481-743 366-613 (694)
139 cd05040 PTKc_Ack_like Catalyti 100.0 7.3E-33 1.6E-37 287.8 20.9 239 489-751 1-256 (257)
140 cd05069 PTKc_Yes Catalytic dom 100.0 5.8E-33 1.3E-37 289.3 20.2 244 483-752 6-259 (260)
141 cd05032 PTKc_InsR_like Catalyt 100.0 5.2E-33 1.1E-37 292.4 19.9 247 482-751 5-276 (277)
142 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.8E-33 1E-37 294.0 19.5 250 484-753 5-283 (284)
143 cd05584 STKc_p70S6K Catalytic 100.0 9.1E-33 2E-37 297.4 22.0 233 489-748 2-255 (323)
144 cd05601 STKc_CRIK Catalytic do 100.0 3E-33 6.5E-38 302.2 17.8 243 483-748 1-262 (330)
145 cd05056 PTKc_FAK Catalytic dom 100.0 1.4E-32 3.1E-37 288.1 22.2 247 483-755 6-267 (270)
146 cd07862 STKc_CDK6 Catalytic do 100.0 5.7E-33 1.2E-37 294.2 19.5 257 484-748 2-286 (290)
147 cd05629 STKc_NDR_like_fungal C 100.0 5.3E-33 1.1E-37 305.9 19.7 243 483-749 1-305 (377)
148 cd05582 STKc_RSK_N N-terminal 100.0 2.4E-33 5.2E-38 301.3 16.6 230 489-745 2-245 (318)
149 PRK13184 pknD serine/threonine 100.0 7.4E-33 1.6E-37 321.4 21.5 254 483-757 2-294 (932)
150 cd05042 PTKc_Aatyk Catalytic d 100.0 1E-32 2.3E-37 288.9 20.7 243 490-751 2-268 (269)
151 cd05050 PTKc_Musk Catalytic do 100.0 7.3E-33 1.6E-37 293.1 19.6 248 482-752 4-288 (288)
152 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.2E-33 7E-38 295.3 16.7 247 483-751 5-268 (284)
153 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-32 2.4E-37 294.7 20.9 255 483-750 1-288 (308)
154 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.3E-32 2.8E-37 295.2 21.3 251 482-755 11-295 (314)
155 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-32 2.5E-37 291.3 20.7 244 484-749 1-261 (285)
156 cd05596 STKc_ROCK Catalytic do 100.0 4.8E-33 1E-37 304.9 18.2 245 481-749 41-304 (370)
157 cd05594 STKc_PKB_alpha Catalyt 100.0 5.3E-33 1.1E-37 299.6 18.3 235 489-749 1-252 (325)
158 cd06637 STKc_TNIK Catalytic do 100.0 8.1E-33 1.8E-37 290.1 19.2 251 480-748 3-268 (272)
159 cd05057 PTKc_EGFR_like Catalyt 100.0 2.2E-32 4.7E-37 288.2 22.3 247 483-755 7-270 (279)
160 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-32 3.3E-37 285.6 20.7 233 489-750 1-258 (259)
161 cd05073 PTKc_Hck Catalytic dom 100.0 2.7E-32 5.9E-37 284.3 22.4 245 482-752 5-259 (260)
162 cd05110 PTKc_HER4 Catalytic do 100.0 1E-32 2.3E-37 294.3 19.6 247 483-755 7-270 (303)
163 cd05589 STKc_PKN Catalytic dom 100.0 1.3E-32 2.7E-37 296.5 20.0 231 485-743 1-246 (324)
164 KOG3653 Transforming growth fa 100.0 1.7E-32 3.7E-37 284.3 20.0 259 484-758 211-508 (534)
165 cd05618 STKc_aPKC_iota Catalyt 100.0 9E-33 1.9E-37 298.1 18.8 231 489-743 1-250 (329)
166 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.8E-32 6E-37 285.6 21.8 243 490-751 2-267 (268)
167 cd05591 STKc_nPKC_epsilon Cata 100.0 2.2E-32 4.8E-37 294.2 21.6 234 489-749 1-254 (321)
168 cd05608 STKc_GRK1 Catalytic do 100.0 1.8E-32 3.9E-37 289.0 20.5 236 491-748 1-256 (280)
169 cd05621 STKc_ROCK2 Catalytic d 100.0 1.1E-32 2.4E-37 301.7 19.6 247 479-749 39-304 (370)
170 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.7E-33 1.7E-37 288.1 17.4 235 489-750 1-257 (258)
171 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-32 2.7E-37 292.6 19.3 242 483-749 20-270 (296)
172 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.8E-32 6E-37 295.2 22.2 251 483-756 12-296 (334)
173 cd05112 PTKc_Itk Catalytic dom 100.0 1.6E-32 3.5E-37 285.1 19.5 243 483-751 4-256 (256)
174 cd05588 STKc_aPKC Catalytic do 100.0 1.8E-32 3.9E-37 295.8 20.5 236 489-748 1-261 (329)
175 cd06625 STKc_MEKK3_like Cataly 100.0 4.4E-32 9.5E-37 283.0 22.6 242 483-749 2-260 (263)
176 cd05607 STKc_GRK7 Catalytic do 100.0 2E-32 4.4E-37 288.1 20.2 238 491-750 1-251 (277)
177 KOG0201 Serine/threonine prote 100.0 1.2E-33 2.6E-38 291.1 10.4 240 484-749 14-263 (467)
178 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-32 4.1E-37 302.1 20.7 191 484-688 2-251 (382)
179 cd06619 PKc_MKK5 Catalytic dom 100.0 2.2E-32 4.8E-37 288.2 20.2 239 484-749 2-253 (279)
180 PTZ00036 glycogen synthase kin 100.0 8.6E-33 1.9E-37 309.2 18.0 261 481-749 64-351 (440)
181 cd05034 PTKc_Src_like Catalyti 100.0 2.9E-32 6.4E-37 284.0 20.8 246 482-752 5-260 (261)
182 cd05598 STKc_LATS Catalytic do 100.0 1E-32 2.2E-37 303.6 18.1 243 483-749 1-301 (376)
183 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.8E-32 1E-36 286.5 22.6 247 483-749 1-262 (286)
184 PHA03212 serine/threonine kina 100.0 1.7E-32 3.6E-37 302.1 19.8 184 482-686 91-284 (391)
185 cd06631 STKc_YSK4 Catalytic do 100.0 3.9E-32 8.5E-37 283.8 21.6 241 484-748 1-261 (265)
186 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-32 5.1E-37 295.5 20.6 241 484-748 1-266 (332)
187 cd05041 PTKc_Fes_like Catalyti 100.0 3.8E-32 8.2E-37 281.4 21.2 238 489-751 1-250 (251)
188 cd06643 STKc_SLK Catalytic dom 100.0 3.8E-32 8.2E-37 286.8 21.4 242 485-749 7-262 (282)
189 cd05587 STKc_cPKC Catalytic do 100.0 1.9E-32 4.1E-37 295.1 19.3 233 484-743 1-246 (324)
190 cd05592 STKc_nPKC_theta_delta 100.0 3.3E-32 7.2E-37 292.0 21.1 231 489-746 1-244 (316)
191 cd06639 STKc_myosinIIIB Cataly 100.0 2.4E-32 5.2E-37 289.7 19.8 259 473-748 12-286 (291)
192 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-32 4.3E-37 294.9 19.2 233 484-743 1-246 (323)
193 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.7E-32 3.7E-37 288.6 18.3 238 485-749 6-253 (277)
194 cd05619 STKc_nPKC_theta Cataly 100.0 2.2E-32 4.8E-37 293.3 19.3 232 489-747 1-246 (316)
195 cd05590 STKc_nPKC_eta Catalyti 100.0 1.9E-32 4.1E-37 294.5 18.7 228 489-743 1-241 (320)
196 cd05044 PTKc_c-ros Catalytic d 100.0 2.2E-32 4.8E-37 286.2 18.8 241 489-752 1-269 (269)
197 cd05083 PTKc_Chk Catalytic dom 100.0 2.7E-32 5.9E-37 283.2 19.2 242 483-752 6-253 (254)
198 cd05046 PTK_CCK4 Pseudokinase 100.0 4.3E-32 9.4E-37 285.1 20.9 247 483-751 5-274 (275)
199 cd00192 PTKc Catalytic domain 100.0 6.1E-32 1.3E-36 281.0 21.8 240 489-751 1-262 (262)
200 cd06644 STKc_STK10_LOK Catalyt 100.0 5.5E-32 1.2E-36 287.1 21.8 244 483-749 12-269 (292)
201 cd06611 STKc_SLK_like Catalyti 100.0 2.4E-32 5.2E-37 288.0 18.9 245 482-749 4-262 (280)
202 KOG0594 Protein kinase PCTAIRE 100.0 1.2E-32 2.5E-37 279.8 15.7 259 483-749 11-302 (323)
203 cd07853 STKc_NLK Catalytic dom 100.0 3.3E-32 7.1E-37 299.0 20.6 256 484-749 1-288 (372)
204 cd05620 STKc_nPKC_delta Cataly 100.0 2.5E-32 5.4E-37 293.0 19.0 232 489-747 1-246 (316)
205 cd05570 STKc_PKC Catalytic dom 100.0 3.4E-32 7.3E-37 292.3 20.1 233 489-748 1-251 (318)
206 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.5E-32 1.4E-36 283.4 21.4 252 485-753 1-272 (273)
207 cd06638 STKc_myosinIIIA Cataly 100.0 3.5E-32 7.5E-37 287.6 19.4 260 473-749 8-283 (286)
208 cd08219 STKc_Nek3 Catalytic do 100.0 8E-32 1.7E-36 279.8 21.7 242 484-749 1-252 (255)
209 cd08221 STKc_Nek9 Catalytic do 100.0 7.5E-32 1.6E-36 280.1 21.3 242 484-749 1-253 (256)
210 cd06612 STKc_MST1_2 Catalytic 100.0 4.7E-32 1E-36 281.4 19.5 241 483-748 3-252 (256)
211 cd06655 STKc_PAK2 Catalytic do 100.0 7.1E-32 1.5E-36 286.8 21.0 242 483-749 19-269 (296)
212 cd05622 STKc_ROCK1 Catalytic d 100.0 4.3E-32 9.4E-37 297.3 19.9 250 477-750 37-305 (371)
213 cd06656 STKc_PAK3 Catalytic do 100.0 5E-32 1.1E-36 288.1 19.6 242 483-749 19-269 (297)
214 cd05575 STKc_SGK Catalytic dom 100.0 4.6E-32 9.9E-37 292.0 19.4 229 489-744 1-242 (323)
215 cd08528 STKc_Nek10 Catalytic d 100.0 4.6E-32 1E-36 283.9 18.8 247 484-751 1-268 (269)
216 cd06613 STKc_MAP4K3_like Catal 100.0 6.1E-32 1.3E-36 281.6 19.6 246 482-748 2-259 (262)
217 cd06632 STKc_MEKK1_plant Catal 100.0 9.6E-32 2.1E-36 279.3 20.7 239 485-748 2-254 (258)
218 cd07861 STKc_CDK1_euk Catalyti 100.0 2.4E-32 5.2E-37 288.6 16.3 252 484-748 1-281 (285)
219 cd06640 STKc_MST4 Catalytic do 100.0 7E-32 1.5E-36 284.0 19.7 239 484-749 5-253 (277)
220 cd05604 STKc_SGK3 Catalytic do 100.0 3.7E-32 7.9E-37 293.0 17.7 233 489-748 1-246 (325)
221 cd07876 STKc_JNK2 Catalytic do 100.0 9.6E-32 2.1E-36 293.9 21.2 256 481-749 19-315 (359)
222 cd08227 PK_STRAD_alpha Pseudok 100.0 7.8E-32 1.7E-36 290.8 20.2 189 487-687 2-212 (327)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-31 2.5E-36 280.6 20.9 238 485-748 2-263 (267)
224 cd06645 STKc_MAP4K3 Catalytic 100.0 6.3E-32 1.4E-36 282.6 18.9 243 483-748 9-264 (267)
225 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-31 2.8E-36 283.2 21.4 243 485-749 2-261 (285)
226 cd06609 STKc_MST3_like Catalyt 100.0 1.1E-31 2.3E-36 282.1 20.5 240 484-749 2-251 (274)
227 KOG4279 Serine/threonine prote 100.0 1.5E-32 3.3E-37 293.8 14.1 237 490-749 582-832 (1226)
228 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.8E-32 1E-36 290.0 18.1 253 483-749 6-286 (309)
229 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-31 3.9E-36 279.1 22.0 242 483-748 2-260 (266)
230 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.3E-32 9.2E-37 286.8 17.4 252 483-748 1-282 (286)
231 cd05615 STKc_cPKC_alpha Cataly 100.0 7E-32 1.5E-36 290.5 19.3 234 484-744 1-247 (323)
232 cd05630 STKc_GRK6 Catalytic do 100.0 8.6E-32 1.9E-36 284.6 19.5 243 485-749 2-261 (285)
233 cd05627 STKc_NDR2 Catalytic do 100.0 4.3E-32 9.4E-37 296.7 17.8 192 483-688 1-239 (360)
234 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-31 3.6E-36 288.1 21.7 231 489-743 1-248 (327)
235 cd08223 STKc_Nek4 Catalytic do 100.0 1.8E-31 3.8E-36 277.4 21.1 242 484-748 1-253 (257)
236 PTZ00266 NIMA-related protein 100.0 6.3E-32 1.4E-36 314.8 19.6 251 480-748 10-294 (1021)
237 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.7E-31 6E-36 280.5 22.9 252 483-748 1-282 (286)
238 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-31 3.6E-36 277.5 20.8 241 484-748 1-252 (256)
239 cd05603 STKc_SGK2 Catalytic do 100.0 1.4E-31 3E-36 288.0 20.8 229 489-744 1-242 (321)
240 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.7E-31 3.8E-36 280.1 21.0 244 485-749 3-269 (272)
241 cd05609 STKc_MAST Catalytic do 100.0 1.5E-31 3.3E-36 285.6 20.8 247 483-753 1-274 (305)
242 KOG0589 Serine/threonine prote 100.0 3.1E-32 6.7E-37 288.7 15.1 245 482-749 3-258 (426)
243 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-31 3.7E-36 278.4 20.5 248 484-749 1-262 (265)
244 cd07874 STKc_JNK3 Catalytic do 100.0 8.8E-32 1.9E-36 293.8 19.1 256 481-749 15-311 (355)
245 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-31 3.2E-36 288.4 20.2 233 489-748 1-246 (325)
246 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.2E-31 4.7E-36 278.2 20.7 248 483-748 1-263 (267)
247 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1E-31 2.2E-36 286.4 18.6 253 483-749 6-286 (301)
248 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.7E-31 5.8E-36 281.1 21.6 254 483-749 1-266 (287)
249 cd05597 STKc_DMPK_like Catalyt 100.0 1.8E-31 3.8E-36 288.4 20.6 246 483-749 1-266 (331)
250 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-31 2.6E-36 283.8 18.6 257 484-748 1-284 (288)
251 cd06652 STKc_MEKK2 Catalytic d 100.0 2.7E-31 5.9E-36 277.5 21.1 242 483-748 2-260 (265)
252 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.3E-31 5E-36 289.1 21.2 259 481-749 13-298 (343)
253 cd06641 STKc_MST3 Catalytic do 100.0 3.3E-31 7.1E-36 278.9 21.6 238 485-749 6-253 (277)
254 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-31 2.8E-36 282.7 18.5 258 473-748 6-278 (282)
255 cd06607 STKc_TAO Catalytic dom 100.0 3.4E-31 7.4E-36 283.2 21.9 242 483-749 15-267 (307)
256 cd07875 STKc_JNK1 Catalytic do 100.0 1.4E-31 3E-36 293.3 19.3 255 482-749 23-318 (364)
257 smart00219 TyrKc Tyrosine kina 100.0 3.2E-31 6.8E-36 275.3 20.6 242 485-750 1-258 (258)
258 PHA03209 serine/threonine kina 100.0 1.9E-31 4.1E-36 291.1 19.8 185 481-685 64-256 (357)
259 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.4E-31 5.3E-36 280.6 19.7 246 483-749 1-261 (283)
260 cd08220 STKc_Nek8 Catalytic do 100.0 4.9E-31 1.1E-35 273.7 21.6 241 484-748 1-252 (256)
261 KOG0200 Fibroblast/platelet-de 100.0 1E-31 2.2E-36 309.7 18.1 253 480-754 293-580 (609)
262 cd06626 STKc_MEKK4 Catalytic d 100.0 5.7E-31 1.2E-35 274.6 22.1 242 484-748 1-260 (264)
263 cd06647 STKc_PAK_I Catalytic d 100.0 2.5E-31 5.4E-36 282.2 19.4 242 483-749 19-269 (293)
264 cd06658 STKc_PAK5 Catalytic do 100.0 2.4E-31 5.1E-36 282.2 19.1 237 488-749 27-272 (292)
265 cd05624 STKc_MRCK_beta Catalyt 100.0 3.5E-31 7.6E-36 286.0 20.0 246 483-749 1-266 (331)
266 PHA03211 serine/threonine kina 100.0 2.1E-31 4.6E-36 297.0 18.7 183 483-685 169-362 (461)
267 cd06630 STKc_MEKK1 Catalytic d 100.0 5.6E-31 1.2E-35 275.4 20.8 242 484-748 1-263 (268)
268 cd05623 STKc_MRCK_alpha Cataly 100.0 4.3E-31 9.4E-36 285.5 20.5 246 483-749 1-266 (332)
269 cd06605 PKc_MAPKK Catalytic do 100.0 3.6E-31 7.8E-36 276.4 19.2 245 483-749 1-257 (265)
270 cd07868 STKc_CDK8 Catalytic do 100.0 4.1E-31 8.8E-36 283.9 20.1 188 488-687 6-218 (317)
271 cd07841 STKc_CDK7 Catalytic do 100.0 5E-31 1.1E-35 280.5 20.5 252 484-749 1-282 (298)
272 PTZ00284 protein kinase; Provi 100.0 1.7E-31 3.6E-36 302.0 17.7 260 476-749 122-438 (467)
273 cd05586 STKc_Sck1_like Catalyt 100.0 1.8E-31 4E-36 288.2 17.2 228 491-744 1-244 (330)
274 cd06659 STKc_PAK6 Catalytic do 100.0 2.8E-31 6E-36 282.4 18.2 238 487-749 25-271 (297)
275 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.5E-31 9.8E-36 279.9 19.7 253 481-748 3-287 (291)
276 cd06614 STKc_PAK Catalytic dom 100.0 8.3E-31 1.8E-35 277.1 21.3 245 481-749 17-270 (286)
277 cd07844 STKc_PCTAIRE_like Cata 100.0 4.3E-31 9.4E-36 280.0 19.1 252 483-748 5-287 (291)
278 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-30 2.4E-35 272.4 21.7 244 483-749 1-256 (264)
279 cd06608 STKc_myosinIII_like Ca 100.0 4.7E-31 1E-35 276.7 18.7 253 480-748 3-271 (275)
280 cd07860 STKc_CDK2_3 Catalytic 100.0 4.2E-31 9.2E-36 279.0 18.4 250 484-748 1-280 (284)
281 PF00069 Pkinase: Protein kina 100.0 9.7E-32 2.1E-36 279.6 13.2 243 485-748 1-256 (260)
282 cd07867 STKc_CDC2L6 Catalytic 100.0 6E-31 1.3E-35 282.5 19.7 188 488-687 6-218 (317)
283 PHA03207 serine/threonine kina 100.0 5E-31 1.1E-35 291.4 19.5 248 482-749 91-375 (392)
284 cd07839 STKc_CDK5 Catalytic do 100.0 3E-31 6.6E-36 280.1 17.0 250 484-748 1-280 (284)
285 KOG0584 Serine/threonine prote 100.0 9.9E-32 2.1E-36 288.5 13.1 241 486-749 43-296 (632)
286 cd06917 STKc_NAK1_like Catalyt 100.0 8.4E-31 1.8E-35 275.6 19.9 240 484-749 2-255 (277)
287 cd07833 STKc_CDKL Catalytic do 100.0 5.4E-31 1.2E-35 278.6 18.4 251 484-748 2-284 (288)
288 cd05578 STKc_Yank1 Catalytic d 100.0 7.7E-31 1.7E-35 272.9 19.1 240 484-747 1-253 (258)
289 cd08225 STKc_Nek5 Catalytic do 100.0 7.9E-31 1.7E-35 272.4 18.9 241 484-748 1-253 (257)
290 KOG0599 Phosphorylase kinase g 100.0 1.8E-31 3.8E-36 258.0 12.1 247 479-749 13-283 (411)
291 cd05122 PKc_STE Catalytic doma 100.0 2E-30 4.4E-35 267.8 21.0 242 484-748 1-250 (253)
292 cd06635 STKc_TAO1 Catalytic do 100.0 2.3E-30 5E-35 278.0 22.2 242 485-751 27-279 (317)
293 cd06648 STKc_PAK_II Catalytic 100.0 1.9E-30 4.2E-35 274.2 20.5 239 485-748 21-268 (285)
294 cd05574 STKc_phototropin_like 100.0 1.5E-30 3.2E-35 279.4 19.8 242 484-748 2-288 (316)
295 cd05580 STKc_PKA Catalytic dom 100.0 2.2E-30 4.9E-35 274.5 20.5 238 483-747 1-252 (290)
296 PLN00113 leucine-rich repeat r 100.0 7.7E-31 1.7E-35 323.2 19.6 252 116-369 116-371 (968)
297 KOG0032 Ca2+/calmodulin-depend 100.0 2E-30 4.4E-35 279.3 20.2 244 482-749 34-293 (382)
298 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-30 2.6E-35 276.2 17.6 247 484-749 5-267 (288)
299 cd06606 STKc_MAPKKK Catalytic 100.0 4.6E-30 1E-34 266.2 21.6 243 484-748 1-256 (260)
300 cd07832 STKc_CCRK Catalytic do 100.0 2.7E-30 5.8E-35 273.0 20.1 252 484-749 1-282 (286)
301 KOG0577 Serine/threonine prote 100.0 3.7E-31 8E-36 279.1 13.2 240 485-749 28-278 (948)
302 cd07852 STKc_MAPK15 Catalytic 100.0 1.9E-30 4.1E-35 281.2 19.0 259 482-754 6-302 (337)
303 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-30 3.4E-35 276.0 18.0 254 483-748 5-289 (293)
304 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-30 3.2E-35 281.7 18.0 256 483-749 5-294 (334)
305 KOG0579 Ste20-like serine/thre 100.0 1.8E-31 3.9E-36 282.8 10.4 241 485-748 34-288 (1187)
306 cd07831 STKc_MOK Catalytic dom 100.0 3E-30 6.5E-35 272.0 19.8 251 485-748 1-278 (282)
307 cd07849 STKc_ERK1_2_like Catal 100.0 2.3E-30 5E-35 280.4 19.4 257 482-749 4-292 (336)
308 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-30 3.5E-35 276.1 17.8 257 483-748 1-290 (295)
309 cd05579 STKc_MAST_like Catalyt 100.0 2.4E-30 5.2E-35 269.7 18.8 236 491-751 1-256 (265)
310 cd07836 STKc_Pho85 Catalytic d 100.0 1.5E-30 3.3E-35 274.7 17.4 253 484-748 1-280 (284)
311 KOG1024 Receptor-like protein 100.0 1E-30 2.2E-35 264.2 15.1 258 475-754 276-556 (563)
312 cd07835 STKc_CDK1_like Catalyt 100.0 3.2E-30 7E-35 272.1 19.8 250 485-748 1-279 (283)
313 KOG4250 TANK binding protein k 100.0 1E-30 2.2E-35 284.0 16.0 199 485-688 15-227 (732)
314 KOG4717 Serine/threonine prote 100.0 1E-30 2.2E-35 271.8 15.2 241 483-749 18-270 (864)
315 cd06627 STKc_Cdc7_like Catalyt 100.0 5.9E-30 1.3E-34 265.1 21.1 239 484-748 1-250 (254)
316 cd08226 PK_STRAD_beta Pseudoki 100.0 4E-30 8.7E-35 277.6 20.2 248 489-749 4-308 (328)
317 cd07830 STKc_MAK_like Catalyti 100.0 4.4E-30 9.5E-35 271.0 19.8 251 485-748 1-279 (283)
318 cd05572 STKc_cGK_PKG Catalytic 100.0 7.5E-30 1.6E-34 266.1 21.4 230 491-743 1-241 (262)
319 cd07850 STKc_JNK Catalytic dom 100.0 4.6E-30 9.9E-35 280.0 20.5 256 481-749 14-311 (353)
320 cd06653 STKc_MEKK3_like_1 Cata 100.0 9.5E-30 2.1E-34 265.7 22.1 242 483-748 2-260 (264)
321 cd07865 STKc_CDK9 Catalytic do 100.0 4.4E-30 9.5E-35 274.7 19.7 261 482-748 11-306 (310)
322 KOG0574 STE20-like serine/thre 100.0 6.4E-32 1.4E-36 263.9 4.7 239 485-748 35-282 (502)
323 cd07864 STKc_CDK12 Catalytic d 100.0 4.3E-30 9.2E-35 273.9 19.0 263 480-748 4-298 (302)
324 cd05633 STKc_GRK3 Catalytic do 100.0 7.7E-30 1.7E-34 268.7 20.5 236 490-749 1-255 (279)
325 cd06634 STKc_TAO2 Catalytic do 100.0 1E-29 2.3E-34 271.8 21.7 241 485-750 17-268 (308)
326 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-31 3.2E-36 254.9 6.3 244 482-748 10-266 (355)
327 cd08216 PK_STRAD Pseudokinase 100.0 9.6E-30 2.1E-34 272.8 21.0 248 488-749 7-295 (314)
328 cd06618 PKc_MKK7 Catalytic dom 100.0 6.5E-30 1.4E-34 271.7 19.6 246 482-749 14-273 (296)
329 cd07840 STKc_CDK9_like Catalyt 100.0 4.8E-30 1E-34 271.0 18.4 252 485-748 1-283 (287)
330 cd05611 STKc_Rim15_like Cataly 100.0 9.6E-30 2.1E-34 264.9 20.3 240 489-751 2-250 (260)
331 cd06657 STKc_PAK4 Catalytic do 100.0 7.9E-30 1.7E-34 270.5 19.9 236 489-749 26-270 (292)
332 cd07842 STKc_CDK8_like Catalyt 100.0 3E-30 6.6E-35 276.8 16.8 193 485-687 2-218 (316)
333 cd08530 STKc_CNK2-like Catalyt 100.0 7.1E-30 1.5E-34 264.9 19.0 242 484-748 1-252 (256)
334 KOG0586 Serine/threonine prote 100.0 3.2E-30 7E-35 276.7 16.6 242 481-749 54-306 (596)
335 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-29 2.7E-34 266.9 20.6 233 491-745 1-245 (277)
336 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.6E-30 1E-34 276.8 17.4 256 479-749 6-288 (328)
337 cd07845 STKc_CDK10 Catalytic d 100.0 7E-30 1.5E-34 273.3 18.7 256 482-749 6-290 (309)
338 cd08215 STKc_Nek Catalytic dom 100.0 1.7E-29 3.6E-34 262.1 20.8 242 484-748 1-254 (258)
339 cd07879 STKc_p38delta_MAPK13 C 100.0 1.4E-29 3E-34 274.9 21.1 261 482-755 14-305 (342)
340 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-29 3.2E-34 274.2 21.2 261 483-754 5-298 (337)
341 cd07866 STKc_BUR1 Catalytic do 100.0 9.5E-30 2.1E-34 272.2 18.6 261 482-748 7-307 (311)
342 cd07834 STKc_MAPK Catalytic do 100.0 1.9E-29 4.1E-34 272.6 20.7 260 484-755 1-297 (330)
343 cd07838 STKc_CDK4_6_like Catal 100.0 2.4E-29 5.2E-34 265.8 21.0 254 485-748 1-283 (287)
344 cd06633 STKc_TAO3 Catalytic do 100.0 3.5E-29 7.7E-34 268.3 22.5 240 485-749 23-273 (313)
345 cd05583 STKc_MSK_N N-terminal 100.0 1.2E-29 2.7E-34 268.4 18.4 245 484-753 1-267 (288)
346 PLN00009 cyclin-dependent kina 100.0 1.6E-29 3.4E-34 268.5 19.1 252 483-749 2-284 (294)
347 PHA03390 pk1 serine/threonine- 100.0 2.2E-29 4.8E-34 263.5 19.9 243 476-748 7-261 (267)
348 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-29 2.9E-34 267.1 18.2 248 485-748 1-279 (283)
349 KOG0667 Dual-specificity tyros 100.0 1.3E-29 2.8E-34 275.0 18.4 191 484-688 187-391 (586)
350 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-29 3E-34 266.4 18.0 239 483-748 1-276 (280)
351 cd05613 STKc_MSK1_N N-terminal 100.0 2.9E-29 6.3E-34 265.9 20.5 241 484-748 1-267 (290)
352 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.1E-29 4.6E-34 273.7 19.6 266 474-749 8-300 (345)
353 cd05606 STKc_beta_ARK Catalyti 100.0 4.9E-29 1.1E-33 262.5 21.2 236 490-749 1-255 (278)
354 cd08222 STKc_Nek11 Catalytic d 100.0 2E-29 4.4E-34 262.5 17.9 241 484-748 1-256 (260)
355 PHA02882 putative serine/threo 100.0 1.5E-29 3.3E-34 268.6 17.1 252 483-750 12-293 (294)
356 cd07829 STKc_CDK_like Catalyti 100.0 2.4E-29 5.3E-34 265.0 18.3 250 485-748 1-278 (282)
357 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.7E-29 5.9E-34 272.6 18.0 257 483-749 5-300 (342)
358 KOG0610 Putative serine/threon 100.0 3.2E-29 7E-34 256.5 16.9 237 483-742 77-381 (459)
359 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.5E-29 1.4E-33 269.7 20.5 257 481-749 13-298 (343)
360 PTZ00024 cyclin-dependent prot 100.0 3.1E-29 6.8E-34 271.4 17.2 248 487-749 13-313 (335)
361 KOG0596 Dual specificity; seri 100.0 3.7E-29 7.9E-34 263.6 16.2 242 483-749 361-627 (677)
362 KOG4645 MAPKKK (MAP kinase kin 100.0 1.6E-30 3.5E-35 297.1 6.3 240 483-747 1235-1492(1509)
363 PHA03210 serine/threonine kina 100.0 5.2E-29 1.1E-33 282.9 17.9 257 481-749 146-454 (501)
364 cd07851 STKc_p38 Catalytic dom 100.0 4.9E-29 1.1E-33 270.8 16.5 257 481-749 13-298 (343)
365 cd05123 STKc_AGC Catalytic dom 100.0 2E-28 4.3E-33 253.2 19.9 228 491-745 1-240 (250)
366 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-28 3.3E-33 265.7 19.7 254 484-749 1-292 (332)
367 KOG0983 Mitogen-activated prot 100.0 2.1E-29 4.5E-34 243.9 10.9 242 486-749 95-349 (391)
368 KOG1035 eIF-2alpha kinase GCN2 100.0 4.3E-29 9.3E-34 284.3 14.7 254 479-748 475-870 (1351)
369 KOG1006 Mitogen-activated prot 100.0 1.6E-30 3.5E-35 250.8 2.6 243 488-750 69-328 (361)
370 KOG0986 G protein-coupled rece 100.0 2.6E-29 5.6E-34 258.7 11.2 238 482-741 184-433 (591)
371 PLN03224 probable serine/threo 100.0 4.6E-28 1E-32 269.7 20.2 256 481-748 143-499 (507)
372 cd05610 STKc_MASTL Catalytic d 100.0 7.7E-28 1.7E-32 281.8 19.3 145 483-641 4-152 (669)
373 cd05576 STKc_RPK118_like Catal 100.0 7.6E-28 1.6E-32 247.2 16.0 217 494-746 4-226 (237)
374 KOG0662 Cyclin-dependent kinas 100.0 8.5E-28 1.8E-32 218.9 13.5 189 484-686 3-204 (292)
375 KOG0607 MAP kinase-interacting 100.0 5.3E-28 1.2E-32 238.8 12.6 249 474-748 74-360 (463)
376 KOG0612 Rho-associated, coiled 99.9 4.3E-28 9.2E-33 274.1 12.5 208 476-699 68-293 (1317)
377 KOG0666 Cyclin C-dependent kin 99.9 5.1E-28 1.1E-32 238.2 11.2 193 483-686 24-241 (438)
378 KOG0604 MAP kinase-activated p 99.9 7.6E-28 1.6E-32 236.1 12.2 248 481-748 59-321 (400)
379 KOG0603 Ribosomal protein S6 k 99.9 7.8E-28 1.7E-32 259.8 12.8 234 482-748 321-562 (612)
380 KOG0587 Traf2- and Nck-interac 99.9 2.8E-27 6.1E-32 261.9 16.9 256 475-748 11-281 (953)
381 KOG0690 Serine/threonine prote 99.9 7.9E-28 1.7E-32 237.8 11.2 234 481-741 166-411 (516)
382 KOG1151 Tousled-like protein k 99.9 1.2E-27 2.6E-32 244.9 11.7 243 485-747 465-739 (775)
383 smart00220 S_TKc Serine/Threon 99.9 1.1E-26 2.4E-31 238.1 19.0 231 495-748 1-240 (244)
384 PLN03225 Serine/threonine-prot 99.9 3E-27 6.6E-32 270.0 16.4 260 481-749 130-450 (566)
385 KOG0669 Cyclin T-dependent kin 99.9 2.7E-28 5.9E-33 233.5 5.9 259 485-749 19-315 (376)
386 KOG0696 Serine/threonine prote 99.9 1.7E-27 3.7E-32 242.0 9.3 192 483-688 349-553 (683)
387 KOG0668 Casein kinase II, alph 99.9 2.1E-27 4.7E-32 224.4 8.7 250 482-749 37-322 (338)
388 KOG0984 Mitogen-activated prot 99.9 1.2E-26 2.6E-31 216.3 10.3 196 483-689 46-256 (282)
389 KOG4236 Serine/threonine prote 99.9 4.5E-26 9.8E-31 237.8 12.1 236 488-747 569-817 (888)
390 KOG1027 Serine/threonine prote 99.9 2.2E-25 4.8E-30 245.8 13.8 236 485-748 511-766 (903)
391 KOG4194 Membrane glycoprotein 99.9 1.2E-26 2.6E-31 245.3 2.4 268 101-368 156-430 (873)
392 cd00180 PKc Catalytic domain o 99.9 2.7E-24 5.9E-29 214.8 19.1 202 491-749 1-214 (215)
393 KOG0608 Warts/lats-like serine 99.9 4.7E-25 1E-29 234.8 13.6 154 473-640 616-776 (1034)
394 KOG4194 Membrane glycoprotein 99.9 5.7E-26 1.2E-30 240.2 5.0 271 100-371 84-382 (873)
395 KOG0695 Serine/threonine prote 99.9 8.5E-25 1.8E-29 217.0 10.5 192 482-687 249-453 (593)
396 KOG0614 cGMP-dependent protein 99.9 3E-25 6.5E-30 231.3 5.3 234 484-742 421-665 (732)
397 KOG0671 LAMMER dual specificit 99.9 3E-24 6.6E-29 218.2 12.3 254 482-749 88-406 (415)
398 smart00221 STYKc Protein kinas 99.9 3.4E-23 7.4E-28 210.0 18.0 190 485-687 1-202 (225)
399 KOG0444 Cytoskeletal regulator 99.9 3.6E-26 7.9E-31 242.7 -5.1 256 107-367 44-329 (1255)
400 KOG0664 Nemo-like MAPK-related 99.9 1.8E-24 3.9E-29 209.3 6.7 193 485-687 55-260 (449)
401 PRK15370 E3 ubiquitin-protein 99.9 2.8E-23 6.1E-28 240.7 17.5 312 26-367 60-401 (754)
402 KOG0444 Cytoskeletal regulator 99.9 1.2E-25 2.7E-30 238.7 -3.3 251 110-365 118-373 (1255)
403 KOG0576 Mitogen-activated prot 99.9 7.1E-24 1.5E-28 228.1 7.0 245 481-748 13-270 (829)
404 KOG1345 Serine/threonine kinas 99.9 5.4E-23 1.2E-27 199.5 11.1 243 483-749 24-284 (378)
405 KOG0472 Leucine-rich repeat pr 99.9 1.5E-25 3.3E-30 227.8 -11.9 249 110-367 60-310 (565)
406 KOG0665 Jun-N-terminal kinase 99.9 2.3E-22 5E-27 200.0 8.5 248 488-749 22-310 (369)
407 KOG1152 Signal transduction se 99.9 2.1E-22 4.5E-27 213.4 8.7 189 483-685 561-769 (772)
408 KOG0670 U4/U6-associated splic 99.9 6.7E-22 1.5E-26 207.0 12.2 192 483-687 432-637 (752)
409 KOG0472 Leucine-rich repeat pr 99.9 9.6E-24 2.1E-28 214.7 -1.7 251 109-367 174-541 (565)
410 KOG0195 Integrin-linked kinase 99.9 2E-22 4.4E-27 195.1 5.7 239 487-754 194-447 (448)
411 PLN00181 protein SPA1-RELATED; 99.9 4.1E-22 9E-27 239.3 9.2 194 535-749 28-265 (793)
412 PRK15387 E3 ubiquitin-protein 99.9 5.2E-21 1.1E-25 220.4 16.3 229 108-370 214-461 (788)
413 KOG1290 Serine/threonine prote 99.9 1.2E-20 2.6E-25 197.0 16.7 137 483-628 78-223 (590)
414 PRK09188 serine/threonine prot 99.8 9.9E-21 2.1E-25 202.5 14.9 141 480-644 15-163 (365)
415 PRK15387 E3 ubiquitin-protein 99.8 6.8E-20 1.5E-24 211.2 14.6 209 117-351 241-466 (788)
416 cd05147 RIO1_euk RIO kinase fa 99.8 6.2E-20 1.3E-24 180.6 12.1 139 488-643 2-167 (190)
417 smart00750 KIND kinase non-cat 99.8 8.7E-20 1.9E-24 178.1 12.3 164 572-754 1-170 (176)
418 KOG1167 Serine/threonine prote 99.8 7.3E-20 1.6E-24 189.0 11.8 145 478-641 31-181 (418)
419 PLN03210 Resistant to P. syrin 99.8 8.6E-19 1.9E-23 217.1 21.7 250 107-367 601-883 (1153)
420 cd05145 RIO1_like RIO kinase f 99.8 5.8E-19 1.3E-23 174.4 14.8 138 488-643 2-167 (190)
421 KOG1023 Natriuretic peptide re 99.8 2.8E-19 6.1E-24 194.4 12.9 208 533-755 1-226 (484)
422 PRK15370 E3 ubiquitin-protein 99.8 3.1E-19 6.7E-24 207.2 12.9 226 118-367 199-428 (754)
423 KOG4237 Extracellular matrix p 99.8 1.2E-21 2.5E-26 199.6 -6.2 258 112-369 85-361 (498)
424 PRK10359 lipopolysaccharide co 99.8 3.2E-19 7E-24 177.4 10.3 177 482-678 30-215 (232)
425 PLN03210 Resistant to P. syrin 99.8 3.9E-18 8.4E-23 211.3 20.8 249 109-364 579-835 (1153)
426 KOG0618 Serine/threonine phosp 99.8 4.2E-21 9E-26 214.2 -6.7 260 101-365 75-487 (1081)
427 PRK10345 hypothetical protein; 99.8 5E-18 1.1E-22 168.6 13.7 140 486-640 5-156 (210)
428 COG0515 SPS1 Serine/threonine 99.7 8.2E-17 1.8E-21 172.1 20.1 250 485-749 2-275 (384)
429 PRK12274 serine/threonine prot 99.7 2.5E-17 5.4E-22 160.3 13.4 175 486-686 5-208 (218)
430 KOG0617 Ras suppressor protein 99.7 6.9E-20 1.5E-24 166.4 -5.2 162 113-299 28-190 (264)
431 cd00116 LRR_RI Leucine-rich re 99.7 3.7E-19 7.9E-24 191.2 -5.1 255 111-365 16-318 (319)
432 KOG0618 Serine/threonine phosp 99.7 5.5E-19 1.2E-23 197.4 -3.9 259 101-370 28-326 (1081)
433 KOG1164 Casein kinase (serine/ 99.7 7.3E-16 1.6E-20 165.4 19.8 251 484-756 19-300 (322)
434 smart00090 RIO RIO-like kinase 99.7 1.3E-16 2.8E-21 162.5 12.4 141 484-643 29-198 (237)
435 cd05144 RIO2_C RIO kinase fami 99.7 2.2E-16 4.9E-21 157.2 13.5 143 477-643 9-175 (198)
436 PRK14879 serine/threonine prot 99.7 2.2E-16 4.7E-21 159.0 13.6 134 489-642 2-143 (211)
437 PRK09605 bifunctional UGMP fam 99.7 2.4E-16 5.3E-21 180.7 13.3 138 483-643 333-477 (535)
438 TIGR03724 arch_bud32 Kae1-asso 99.7 5.2E-16 1.1E-20 154.7 12.6 130 490-642 1-138 (199)
439 PLN03150 hypothetical protein; 99.6 7E-16 1.5E-20 178.7 13.9 159 25-226 368-527 (623)
440 KOG4237 Extracellular matrix p 99.6 1.4E-18 3E-23 177.4 -7.6 248 121-368 70-336 (498)
441 KOG0617 Ras suppressor protein 99.6 2.3E-18 5E-23 156.5 -5.7 166 138-352 29-194 (264)
442 KOG4158 BRPK/PTEN-induced prot 99.6 8.2E-16 1.8E-20 157.1 11.5 197 536-751 273-512 (598)
443 cd00116 LRR_RI Leucine-rich re 99.6 8.6E-18 1.9E-22 180.6 -3.2 247 122-368 2-292 (319)
444 KOG0590 Checkpoint kinase and 99.6 2.2E-16 4.9E-21 180.2 7.0 249 487-754 322-592 (601)
445 KOG0603 Ribosomal protein S6 k 99.6 5E-16 1.1E-20 168.8 3.3 184 490-687 1-193 (612)
446 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.3E-19 143.7 11.7 135 488-643 2-164 (187)
447 KOG1240 Protein kinase contain 99.6 7.6E-16 1.6E-20 175.1 2.0 236 484-750 24-292 (1431)
448 cd05120 APH_ChoK_like Aminogly 99.5 3.7E-14 8.1E-19 133.9 12.6 134 488-642 3-138 (155)
449 PRK01723 3-deoxy-D-manno-octul 99.5 1.6E-13 3.4E-18 140.2 13.9 139 488-642 36-191 (239)
450 PF14531 Kinase-like: Kinase-l 99.5 2.2E-14 4.7E-19 147.3 7.0 235 485-740 14-288 (288)
451 KOG1166 Mitotic checkpoint ser 99.5 1E-13 2.2E-18 161.3 12.0 185 482-683 697-901 (974)
452 KOG1163 Casein kinase (serine/ 99.5 1.1E-13 2.3E-18 133.1 9.5 190 482-687 14-223 (341)
453 PLN03150 hypothetical protein; 99.5 1.8E-13 3.8E-18 158.8 12.1 109 260-368 420-529 (623)
454 KOG0532 Leucine-rich repeat (L 99.4 8.2E-15 1.8E-19 156.3 -5.8 182 139-350 72-253 (722)
455 KOG0532 Leucine-rich repeat (L 99.4 8.5E-15 1.8E-19 156.2 -5.9 175 116-296 73-248 (722)
456 TIGR01982 UbiB 2-polyprenylphe 99.4 2.5E-12 5.5E-17 142.7 13.4 145 484-644 119-308 (437)
457 KOG1165 Casein kinase (serine/ 99.4 1.4E-11 3E-16 124.0 16.8 189 483-687 28-238 (449)
458 COG4886 Leucine-rich repeat (L 99.3 1.9E-12 4.2E-17 143.4 5.8 196 122-324 97-295 (394)
459 COG4886 Leucine-rich repeat (L 99.3 4.5E-12 9.7E-17 140.5 7.7 198 145-349 96-296 (394)
460 KOG1033 eIF-2alpha kinase PEK/ 99.3 3.2E-12 7E-17 136.9 5.1 237 488-746 249-509 (516)
461 KOG0606 Microtubule-associated 99.2 1.4E-11 3E-16 141.0 7.0 199 482-741 82-304 (1205)
462 KOG0590 Checkpoint kinase and 99.2 4.9E-12 1.1E-16 144.8 1.7 247 482-749 19-286 (601)
463 KOG1266 Protein kinase [Signal 99.2 7.3E-11 1.6E-15 118.8 8.7 196 533-749 121-331 (458)
464 cd05151 ChoK Choline Kinase (C 99.2 1.3E-10 2.9E-15 112.3 10.1 129 489-641 4-135 (170)
465 PRK04750 ubiB putative ubiquin 99.2 1.6E-10 3.4E-15 129.8 11.8 144 482-643 119-314 (537)
466 PF14580 LRR_9: Leucine-rich r 99.0 1E-10 2.2E-15 111.9 3.4 126 113-244 14-147 (175)
467 KOG3207 Beta-tubulin folding c 99.0 2.5E-11 5.5E-16 126.5 -1.1 163 114-297 117-286 (505)
468 KOG1259 Nischarin, modulator o 99.0 6.6E-11 1.4E-15 117.3 0.2 63 185-249 279-341 (490)
469 KOG3207 Beta-tubulin folding c 99.0 1.1E-10 2.4E-15 121.7 0.0 191 113-319 141-339 (505)
470 cd05146 RIO3_euk RIO kinase fa 99.0 9.1E-09 2E-13 100.6 13.3 135 489-643 3-174 (197)
471 KOG1259 Nischarin, modulator o 98.9 9.1E-11 2E-15 116.4 -1.5 134 112-251 278-413 (490)
472 cd05154 ACAD10_11_like Acyl-Co 98.9 8.7E-09 1.9E-13 104.3 12.4 145 489-642 4-206 (223)
473 PF14580 LRR_9: Leucine-rich r 98.9 5.4E-10 1.2E-14 107.0 2.8 108 138-250 15-126 (175)
474 COG3642 Mn2+-dependent serine/ 98.9 1.7E-08 3.7E-13 95.2 12.6 132 489-643 2-141 (204)
475 KOG0531 Protein phosphatase 1, 98.9 1.5E-10 3.2E-15 128.8 -2.1 196 115-319 69-268 (414)
476 KOG0531 Protein phosphatase 1, 98.9 5.5E-10 1.2E-14 124.2 1.0 198 112-319 89-290 (414)
477 KOG1243 Protein kinase [Genera 98.8 2.2E-08 4.7E-13 110.8 11.7 160 504-681 34-199 (690)
478 KOG3087 Serine/threonine prote 98.8 4.9E-08 1.1E-12 91.5 12.2 143 487-642 11-165 (229)
479 KOG1909 Ran GTPase-activating 98.8 4.4E-10 9.6E-15 114.4 -3.0 238 112-367 24-311 (382)
480 PF13855 LRR_8: Leucine rich r 98.7 5.8E-09 1.3E-13 82.1 3.3 57 120-176 3-59 (61)
481 KOG0601 Cyclin-dependent kinas 98.7 1.1E-08 2.4E-13 112.1 6.6 243 480-752 262-517 (524)
482 PF13855 LRR_8: Leucine rich r 98.7 6.9E-09 1.5E-13 81.6 3.6 61 142-202 1-61 (61)
483 KOG0601 Cyclin-dependent kinas 98.7 2.3E-08 5E-13 109.7 6.5 237 485-748 116-378 (524)
484 KOG4658 Apoptotic ATPase [Sign 98.7 1.3E-08 2.9E-13 120.9 4.3 109 113-222 566-676 (889)
485 KOG4658 Apoptotic ATPase [Sign 98.7 1.2E-08 2.6E-13 121.2 3.9 247 117-367 544-807 (889)
486 PF01163 RIO1: RIO1 family; I 98.6 5E-07 1.1E-11 88.0 11.9 124 498-642 1-155 (188)
487 PRK15123 lipopolysaccharide co 98.5 3.6E-06 7.7E-11 87.1 16.1 144 490-641 29-193 (268)
488 KOG1909 Ran GTPase-activating 98.4 3.1E-08 6.7E-13 101.2 -1.4 205 113-319 53-311 (382)
489 KOG3741 Poly(A) ribonuclease s 98.4 2.1E-06 4.5E-11 92.5 11.3 170 497-682 290-473 (655)
490 PF08263 LRRNT_2: Leucine rich 98.3 7.3E-07 1.6E-11 64.3 4.7 39 28-71 2-43 (43)
491 COG0478 RIO-like serine/threon 98.3 8.1E-06 1.7E-10 81.9 11.5 130 486-639 94-248 (304)
492 KOG1859 Leucine-rich repeat pr 98.3 1E-08 2.2E-13 113.0 -9.7 176 135-319 102-292 (1096)
493 KOG1859 Leucine-rich repeat pr 98.2 1.8E-08 3.9E-13 111.2 -9.2 125 119-250 165-292 (1096)
494 KOG2982 Uncharacterized conser 98.2 2E-07 4.3E-12 93.1 -1.8 87 116-202 69-158 (418)
495 KOG4579 Leucine-rich repeat (L 98.1 5.4E-08 1.2E-12 86.4 -5.9 104 120-227 29-136 (177)
496 KOG0606 Microtubule-associated 98.1 1.1E-06 2.5E-11 101.6 1.6 239 482-744 803-1084(1205)
497 COG0661 AarF Predicted unusual 98.0 4.6E-05 9.9E-10 85.6 12.7 145 483-643 126-315 (517)
498 PF06293 Kdo: Lipopolysacchari 98.0 5.4E-05 1.2E-09 75.6 12.1 109 524-642 56-170 (206)
499 PRK09902 hypothetical protein; 98.0 9.2E-05 2E-09 72.8 12.9 141 491-640 26-177 (216)
500 PRK15386 type III secretion pr 98.0 3.1E-05 6.6E-10 83.4 9.7 75 138-225 48-123 (426)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.6e-76 Score=728.07 Aligned_cols=678 Identities=26% Similarity=0.437 Sum_probs=398.7
Q ss_pred CChHHHHHHHHHHHcCCCCC-CCCCccCCCCCCCCCCCCCccceEec-CCCEEEEEeCCCCCCCCC--------------
Q 004232 26 LQSSQTQVLLQLRKHLEYPK-QLEIWINHGADFCYISSSTQVNITCQ-DNFITELKIIGDKPSNVG-------------- 89 (766)
Q Consensus 26 ~~~~~~~aLl~~k~~~~~~~-~l~~W~~~~~~~C~~~~~~~~gv~C~-~~~v~~l~l~~~~~~~~~-------------- 89 (766)
..+.|+.||++||+++.+|. .+.+|+.. .+||.|. ||+|. .++|+.+++.++.+.+..
T Consensus 26 ~~~~~~~~l~~~~~~~~~~~~~~~~w~~~-~~~c~w~-----gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~ 99 (968)
T PLN00113 26 LHAEELELLLSFKSSINDPLKYLSNWNSS-ADVCLWQ-----GITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTIN 99 (968)
T ss_pred CCHHHHHHHHHHHHhCCCCcccCCCCCCC-CCCCcCc-----ceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEE
Confidence 35689999999999998774 68899764 7899985 69996 468999998776433210
Q ss_pred ----CCCc------------cccc--------------------cccCCCcccCCcccccccCCCCCCEEeccccccccc
Q 004232 90 ----NFDG------------FASA--------------------NASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGS 133 (766)
Q Consensus 90 ----~~~~------------~~~~--------------------~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~ 133 (766)
.+.+ +..+ ...++.|...+.+|..++++++|++|+|++|.+.+.
T Consensus 100 Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~ 179 (968)
T PLN00113 100 LSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGK 179 (968)
T ss_pred CCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCccccc
Confidence 0000 0000 001222333345666677777777777777777777
Q ss_pred CCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCC------
Q 004232 134 LPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFP------ 207 (766)
Q Consensus 134 ~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p------ 207 (766)
+|..|+++++|++|+|++|++.+.+|..++++++|++|+|++|.+++.+|..++++++|++|+|++|++++.+|
T Consensus 180 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l 259 (968)
T PLN00113 180 IPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNL 259 (968)
T ss_pred CChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCC
Confidence 77777777777777777777666666666666666666666666665555555555555555555555554444
Q ss_pred ------------------ccccCCCCCCEEEccCCccCCCCCC-CCCCCC------------------------CCEEEC
Q 004232 208 ------------------SSIQRISTLSDLDLSKNAISGSLPD-LSSLGS------------------------LNVLNL 244 (766)
Q Consensus 208 ------------------~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~------------------------L~~L~l 244 (766)
..+.++++|++|+|++|.+++.+|. +..+++ |+.|++
T Consensus 260 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 4444455555555555555443332 222223 333333
Q ss_pred CCCCCCCCCCCC---CC------------------------------------------------CC-------------
Q 004232 245 SDNKLDSNLPKL---PR------------------------------------------------GL------------- 260 (766)
Q Consensus 245 s~N~l~~~~p~~---~~------------------------------------------------~l------------- 260 (766)
++|.+++.+|.. .. +|
T Consensus 340 ~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~ 419 (968)
T PLN00113 340 WSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGE 419 (968)
T ss_pred cCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeE
Confidence 333332222110 00 11
Q ss_pred ----------------------------------------------------------cEEEccCCcCccCCcccccCCC
Q 004232 261 ----------------------------------------------------------VMAFLSNNSFSGEIPKQYGQLN 282 (766)
Q Consensus 261 ----------------------------------------------------------~~l~ls~N~l~~~~p~~~~~l~ 282 (766)
+.|++++|++++.+|..|..++
T Consensus 420 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~ 499 (968)
T PLN00113 420 LPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLS 499 (968)
T ss_pred CChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhh
Confidence 1122222222333333333344
Q ss_pred CCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecC
Q 004232 283 QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFR 362 (766)
Q Consensus 283 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~ 362 (766)
+|+.|++++|++++.+|..+.++++|+.|+|++|.++|.+|..+..+++|+.|||++|+++|.+|..+..++.|+.++++
T Consensus 500 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 579 (968)
T PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNIS 579 (968)
T ss_pred ccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEecc
Confidence 44444444444444555555555555566666666666666656556666666666666666666666666666666666
Q ss_pred CCcCCCCcCCCCC------------CCcchhhhhh-----ccccCCCCcccEEeehhHHHHHHHHHHHHhheeeeeccCC
Q 004232 363 GNCLSSNVQNQHP------------ESYCFEVRTE-----RNQAGSKNVGKLVGIIVGVLVIMVLLAFGFLVVCRRYCPR 425 (766)
Q Consensus 363 ~N~l~~~~~~~~p------------~~~~~~~~~~-----~~~~~~~~~~~~i~iiv~~~~~~~l~~~~~~~~~rr~~~~ 425 (766)
+|.+++.+|.... ...|...... ........+..+++++++++++++++++++ +++||++..
T Consensus 580 ~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 658 (968)
T PLN00113 580 HNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGF-VFIRGRNNL 658 (968)
T ss_pred CCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHH-HHHHhhhcc
Confidence 6666554442110 0112211000 000001111112222222222222222222 222221111
Q ss_pred cccccccccccccCCCCCCCChhhhhhhhhhhhhhhcCCCCCCCccccCHHHHHHHhcCCCcCCceecCCceeEEEEEe-
Q 004232 426 CTSEQHLLHKSVQDNSATGFSSEVLTNARYVSEAAKLGSEGLPACRSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRL- 504 (766)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~- 504 (766)
. . +. ..... +. .+. ... .....+.++++++. ..|...++||+|+||.||+|+.
T Consensus 659 ~-~-~~-----~~~~~--~~-~~~----~~~---------~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~ 712 (968)
T PLN00113 659 E-L-KR-----VENED--GT-WEL----QFF---------DSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSI 712 (968)
T ss_pred c-c-cc-----ccccc--cc-ccc----ccc---------ccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEEC
Confidence 0 0 00 00000 00 000 000 00001224445443 4567788999999999999986
Q ss_pred cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCC
Q 004232 505 ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPG 584 (766)
Q Consensus 505 ~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~ 584 (766)
.+|..||||+++..... ...|++++++++|||||+++|+|.+.+ ..++|||||++|+|.+++++
T Consensus 713 ~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~--------~~~lv~Ey~~~g~L~~~l~~---- 776 (968)
T PLN00113 713 KNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEK--------GAYLIHEYIEGKNLSEVLRN---- 776 (968)
T ss_pred CCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCC--------CCEEEEeCCCCCcHHHHHhc----
Confidence 57899999998654322 234688999999999999999998763 57999999999999999852
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccc----ccccCCCCCCccc
Q 004232 585 KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN----SVGGKQEDPNSWE 660 (766)
Q Consensus 585 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~----~~~~~~~~~~~~~ 660 (766)
++|.++.+++.|+|+||+|||+.+.++|+|||+||+||+++.++.+++. ||.+....... +..+..++.....
T Consensus 777 --l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~ 853 (968)
T PLN00113 777 --LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRETK 853 (968)
T ss_pred --CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCcccccCC
Confidence 7899999999999999999998767799999999999999999988876 66654321111 1112222222334
Q ss_pred CCCCCCCEeehhHHHHHHhcCCCccccCc---cchHHHHhhhhcccCccccccccccC--CCCHHHHHHHHHHHHHhccC
Q 004232 661 MTKLEDDVFSFGFMLLESVAGPSVAARKG---QFLQEELDSLNSQEGRQRLVDPVVMA--TSSLESLSIVISIANKCICS 735 (766)
Q Consensus 661 ~~~~~~DV~SfGvil~ElltG~~p~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~~l~~~C~~~ 735 (766)
.++.++|||||||++|||+||+.|++... .....+............+.||.+.. ....+++.++.+++.+||+.
T Consensus 854 ~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~ 933 (968)
T PLN00113 854 DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTAT 933 (968)
T ss_pred CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcC
Confidence 56778999999999999999999985321 12223322222222334455555432 23446677889999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHh
Q 004232 736 ESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 736 ~p~~RPs~~ev~~~L~~~~~ 755 (766)
||++||+|+||+++|+++.+
T Consensus 934 ~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 934 DPTARPCANDVLKTLESASR 953 (968)
T ss_pred CchhCcCHHHHHHHHHHhhc
Confidence 99999999999999998865
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-54 Score=461.33 Aligned_cols=279 Identities=33% Similarity=0.585 Sum_probs=234.4
Q ss_pred CccccCHHHHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCccccccee
Q 004232 469 ACRSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHC 548 (766)
Q Consensus 469 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~ 548 (766)
..+.|++++++.||++|+..++||+|+||.||+|.+.+|..||||++........++|..|++++++++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 35679999999999999999999999999999999999999999988765433145699999999999999999999999
Q ss_pred ecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC
Q 004232 549 IDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE 628 (766)
Q Consensus 549 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 628 (766)
.+.+ +..+||||||++|+|.++|+..... +++|..|++||.++|+||+|||+.+.|+|+||||||+|||||+
T Consensus 141 ~e~~-------~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~ 212 (361)
T KOG1187|consen 141 LEGG-------EHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDE 212 (361)
T ss_pred ecCC-------ceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECC
Confidence 9864 1379999999999999999876533 7899999999999999999999999899999999999999999
Q ss_pred CCcEEEecCCCCccccc-ccc--------cccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccC----ccchHHH
Q 004232 629 HRIAKLSDYGLSIVSED-INS--------VGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARK----GQFLQEE 695 (766)
Q Consensus 629 ~~~~kl~DFGla~~~~~-~~~--------~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~----~~~~~~~ 695 (766)
++++||+|||+|+.... ... .++..++.......+.|+|||||||+|+|++||+.|.+.. ......|
T Consensus 213 ~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 213 DFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 99999999999976643 211 1122222222356778999999999999999999887742 2235666
Q ss_pred HhhhhcccCcccccccccc-CCCCH-HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 696 LDSLNSQEGRQRLVDPVVM-ATSSL-ESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~-~~~~~-~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
...........+++||.+. ..... +++.++..+|.+|++.+|.+||+|.||+++|+.+..
T Consensus 293 ~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 293 AKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 6556666678999999986 44443 688899999999999999999999999999966543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-44 Score=381.03 Aligned_cols=248 Identities=22% Similarity=0.399 Sum_probs=192.3
Q ss_pred cCCceecCCceeEEEEEecCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
..+.||+|+||+||+|.+.....||||++..... ...++|.+|+.+|++++|||||+++|+|.++. ...++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~-------~~~~i 117 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP-------GSLCI 117 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-------CceEE
Confidence 3456999999999999997544599999976432 22679999999999999999999999999863 14899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEecCCCCccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGLSIVS 643 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DFGla~~~ 643 (766)
|||||++|+|.+++++. ....++|..++++|.+||+||.|||+... ||||||||+|||++.++ ++||+|||+++..
T Consensus 118 VtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 118 VTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred EEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceee
Confidence 99999999999999874 23569999999999999999999999731 99999999999999997 9999999999765
Q ss_pred ccc--ccc--ccC----CCCCCc--ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 644 EDI--NSV--GGK----QEDPNS--WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 644 ~~~--~~~--~~~----~~~~~~--~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
... ... .++ .++... ...++.|+|||||||+||||+||+.||..... ......+.....+..+.+.
T Consensus 195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~v~~~~~Rp~~p~~-- 270 (362)
T KOG0192|consen 195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASAVVVGGLRPPIPKE-- 270 (362)
T ss_pred ccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcCCCCCCCcc--
Confidence 432 111 111 111112 23577899999999999999999999975443 2222222222222222221
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+...+..++.+||..||.+||+|.||+..|+.+..
T Consensus 271 -------~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 271 -------CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred -------CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 23447788999999999999999999999997764
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-44 Score=379.87 Aligned_cols=246 Identities=24% Similarity=0.421 Sum_probs=195.3
Q ss_pred CCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 485 FDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
+.+.+.||+|.||.||.|.++....||||.++... ...+.|.+|+++|++++|+|||+|+|+|...+ .++|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~--------piyI 278 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE--------PIYI 278 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCC--------ceEE
Confidence 34467899999999999999888899999998753 34578889999999999999999999999863 6899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
|||||++|+|.++|++.. +..+.-.+.+.++.|||+||+||+++ .+|||||.++|||++++..+||+|||+|+...
T Consensus 279 VtE~m~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEecccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccC
Confidence 999999999999998733 34588889999999999999999998 79999999999999999999999999999654
Q ss_pred cccc-cccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 645 DINS-VGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 645 ~~~~-~~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
+... ....+..|..| ..++.|||||||||+||||+| |+.|++. ....+.+..+ . .-.++..|..
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~--msn~ev~~~l-e--~GyRlp~P~~- 428 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG--MSNEEVLELL-E--RGYRLPRPEG- 428 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC--CCHHHHHHHH-h--ccCcCCCCCC-
Confidence 4332 22222334444 445679999999999999999 6777653 2222222222 2 2234444432
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+...+.+|+..||+.+|++||||+.+...|++...
T Consensus 429 ------CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 429 ------CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred ------CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 23348889999999999999999998888887653
No 5
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-43 Score=390.41 Aligned_cols=255 Identities=27% Similarity=0.443 Sum_probs=202.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
+.+.+..+.||+|+||+||+|+.. +.+.||||.++..... ..++|+||+++|+.++|||||+|+|+|.+++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~-- 562 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD-- 562 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC--
Confidence 455666789999999999999842 4567999999876654 7899999999999999999999999999874
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCC-------C----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCc
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPG-------K----VLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-------~----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~N 623 (766)
..+||+|||..|||.++|+.+.+. . +|+-.+.+.||.|||.||+||-++ .+|||||.++|
T Consensus 563 ------P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRN 633 (774)
T KOG1026|consen 563 ------PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRN 633 (774)
T ss_pred ------eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhh
Confidence 789999999999999999754321 2 378889999999999999999998 78999999999
Q ss_pred eEEcCCCcEEEecCCCCccc--ccccccccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccch
Q 004232 624 ILLNEHRIAKLSDYGLSIVS--EDINSVGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFL 692 (766)
Q Consensus 624 ILld~~~~~kl~DFGla~~~--~~~~~~~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~ 692 (766)
+|+.++..+||+|||+++-. .+++......-.|.+| ..++.+||||||||+|||++| |+.|+.... .
T Consensus 634 CLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--n 711 (774)
T KOG1026|consen 634 CLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--N 711 (774)
T ss_pred ceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc--h
Confidence 99999999999999999643 3444444333334444 456789999999999999998 788875321 1
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
. ++.+....+.. + +.++.+...+.+|+..||+.+|++||+|+||-..|+...+..+.
T Consensus 712 ~-EVIe~i~~g~l--L-------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~ 768 (774)
T KOG1026|consen 712 Q-EVIECIRAGQL--L-------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK 768 (774)
T ss_pred H-HHHHHHHcCCc--c-------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence 2 22222222222 1 22334456689999999999999999999999999998765543
No 6
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-42 Score=371.56 Aligned_cols=245 Identities=22% Similarity=0.432 Sum_probs=197.4
Q ss_pred CcCCceecCCceeEEEEEec----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 486 DMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.++||.|.||.||+|+++ ....||||.++... ...+++|..|..||.+++||||++|-|+.... +
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks--------~ 703 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS--------K 703 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC--------c
Confidence 56789999999999999964 35679999999764 44578899999999999999999999998875 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
.+++|+|||+||+|+.+|+++.. .++|.+...+.++||.||.||.+. ++|||||.++|||++.+..+||+|||++
T Consensus 704 PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 704 PVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred eeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccce
Confidence 78999999999999999998753 389999999999999999999997 8999999999999999999999999999
Q ss_pred ccccccccccc---CCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccc
Q 004232 641 IVSEDINSVGG---KQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 641 ~~~~~~~~~~~---~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
++.++.....+ .+..|..| ..++.++|||||||+|||.++ |.+|+.. ...++.+..+.. -.++
T Consensus 779 Rvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWd--mSNQdVIkaIe~---gyRL 853 (996)
T KOG0196|consen 779 RVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD--MSNQDVIKAIEQ---GYRL 853 (996)
T ss_pred eecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccc--cchHHHHHHHHh---ccCC
Confidence 98765432211 12334444 456678999999999999776 8899752 223333333321 1222
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
. +++++...+.+||+.||++|-.+||.|.||+..|.+++.
T Consensus 854 P-------pPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 854 P-------PPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred C-------CCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 2 223444568899999999999999999999999998774
No 7
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=337.81 Aligned_cols=249 Identities=20% Similarity=0.314 Sum_probs=191.5
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeec
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~ 550 (766)
++++++++ .+.||+|..|+|||++.+ +++.+|+|.+... +....+++.+|++++++.+||+||.++|+|..
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 45555554 578999999999999864 7899999999543 45557889999999999999999999999998
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
.+ +.+.++||||.+|+|++++.+.+ .++....-+|+.+|.+||.|||+. .+||||||||+|||++..|
T Consensus 149 ~~-------~~isI~mEYMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskG 216 (364)
T KOG0581|consen 149 NG-------EEISICMEYMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKG 216 (364)
T ss_pred CC-------ceEEeehhhcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCC
Confidence 74 14899999999999999987653 378888899999999999999964 2899999999999999999
Q ss_pred cEEEecCCCCccccccc--cccc----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc---chHHHHhhhhc
Q 004232 631 IAKLSDYGLSIVSEDIN--SVGG----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ---FLQEELDSLNS 701 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~--~~~~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~---~~~~~~~~~~~ 701 (766)
++||||||+++...+.. +..+ ..++......++.++||||||+.++|+++|+.|+..... ...+.+..+..
T Consensus 217 eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~ 296 (364)
T KOG0581|consen 217 EVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD 296 (364)
T ss_pred CEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc
Confidence 99999999997654321 1111 122223345678899999999999999999999875311 22233333322
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+ ..++. . .+.-.++..++..|+++||.+||+.+|+++.
T Consensus 297 ~p-pP~lP-----~---~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 297 EP-PPRLP-----E---GEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CC-CCCCC-----c---ccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11 11111 1 1233457889999999999999999998765
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=331.69 Aligned_cols=193 Identities=26% Similarity=0.459 Sum_probs=163.5
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..+|...+.||+|+||+||+|+. .++..||||++... .+...+.+..|+.+|++++|||||+|++++++++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~------ 82 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD------ 82 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC------
Confidence 46788888999999999999995 46899999999766 4556777899999999999999999999999874
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC------CcE
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH------RIA 632 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~------~~~ 632 (766)
.+|||||||.+|||.+|++.++ .++......++.|+|.||++||++ +||||||||+||||+.. -.+
T Consensus 83 --~i~lVMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 83 --FIYLVMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred --eEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceE
Confidence 8999999999999999999764 388888999999999999999998 89999999999999864 468
Q ss_pred EEecCCCCcccccccccccCCCCC-------CcccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 633 KLSDYGLSIVSEDINSVGGKQEDP-------NSWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~~~~~~~-------~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
||+|||+|+.........+..+.| .....|+.|+|+||.|+|+||+++|+.||+..
T Consensus 155 KIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 155 KIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred EecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 999999998876543222111111 22356788999999999999999999999743
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.4e-39 Score=344.38 Aligned_cols=240 Identities=21% Similarity=0.377 Sum_probs=192.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..|+..+.||+|||+.||+++. .+|+.||+|++.+. +....+.+.+||++.++++|||||+++++|++..
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~------ 91 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN------ 91 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC------
Confidence 4588899999999999999996 88999999999763 3455778999999999999999999999999874
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
++|||.|+|++|+|..+++.+ ++++..+...+..||+.||.|||+. +|+|||||-.|++|++++++||+|||
T Consensus 92 --nVYivLELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 92 --NVYIVLELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred --ceEEEEEecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 799999999999999988743 4699999999999999999999998 89999999999999999999999999
Q ss_pred CCcccccc-cccccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDI-NSVGGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~-~~~~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
||...+.. ....+..++|. .....+.++||||.||+||-|++|++||.... ..+....+... +..-
T Consensus 164 LAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--vkety~~Ik~~----~Y~~ 237 (592)
T KOG0575|consen 164 LATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--VKETYNKIKLN----EYSM 237 (592)
T ss_pred eeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--HHHHHHHHHhc----Cccc
Confidence 99776532 11111112222 22345678999999999999999999997432 33334444322 2222
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
|... ...+.+|+.+.++.+|.+|||.++|+..
T Consensus 238 P~~l-------s~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 238 PSHL-------SAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccc-------CHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2211 1236788999999999999999999865
No 10
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=351.01 Aligned_cols=262 Identities=20% Similarity=0.372 Sum_probs=200.3
Q ss_pred CHHHHHHHhcCCCcCCceecCCceeEEEEEecC--C--ce-EEEEEccC---ChhhhHHHHHHHHHHHHhCCCCCccccc
Q 004232 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRLEN--G--TS-VAIRCLPS---SKKYTVRNLKLRLDLLAKLRHPHLVCLL 545 (766)
Q Consensus 474 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~--g--~~-vAvK~l~~---~~~~~~~~~~~e~~~l~~l~Hpniv~l~ 545 (766)
..+.|+-..++..+.++||+|+||.||+|++.. + .. ||||..+. ......++|.+|.++|++++|||||+++
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 334455555666777999999999999998653 2 23 89999885 2356688999999999999999999999
Q ss_pred ceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceE
Q 004232 546 GHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNIL 625 (766)
Q Consensus 546 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 625 (766)
|++.+.. ++|+|||+|+||+|+++|++... .++..+++.++.++|.||+|||+. .++||||.++|+|
T Consensus 228 GVa~~~~--------Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL 294 (474)
T KOG0194|consen 228 GVAVLEE--------PLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCL 294 (474)
T ss_pred EEEcCCC--------ccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHhe
Confidence 9998863 79999999999999999987643 589999999999999999999998 7899999999999
Q ss_pred EcCCCcEEEecCCCCcccccccccccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 626 LNEHRIAKLSDYGLSIVSEDINSVGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 626 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
++.++.+||+|||+++..............|..| ..++.++|||||||++||+++ |..|+..... .+..
T Consensus 295 ~~~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~--~~v~ 372 (474)
T KOG0194|consen 295 YSKKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN--YEVK 372 (474)
T ss_pred ecCCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH--HHHH
Confidence 9999999999999987654221111111122233 356679999999999999999 7788864322 2222
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
..+...+......+ .....+..++.+||..+|++||+|.+|.+.++.+....+.
T Consensus 373 ~kI~~~~~r~~~~~---------~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 373 AKIVKNGYRMPIPS---------KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHhcCccCCCCC---------CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 22222221111111 1123366778899999999999999999999998876554
No 11
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=368.39 Aligned_cols=249 Identities=26% Similarity=0.491 Sum_probs=196.1
Q ss_pred CCCcCCceecCCceeEEEEEecC--C----ceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLEN--G----TSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~--g----~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
+.++.+.||+|+||.||+|++.+ | ..||||.++.. +.+...+|.+|..+|++++|||||+++|+|.+.+
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~---- 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG---- 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC----
Confidence 45567899999999999999653 3 34999999765 4567889999999999999999999999999854
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
..++++|||++|||..+|++.++ ...+.-.+.+.++.+||+|+.||++. ++|||||.++|+||++...+
T Consensus 769 ----~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 769 ----PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred ----CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcE
Confidence 57999999999999999987632 23478889999999999999999997 79999999999999999999
Q ss_pred EEecCCCCccc--ccccccccCCCCCCccc--------CCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhc
Q 004232 633 KLSDYGLSIVS--EDINSVGGKQEDPNSWE--------MTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNS 701 (766)
Q Consensus 633 kl~DFGla~~~--~~~~~~~~~~~~~~~~~--------~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~ 701 (766)
||+|||+|+.. .++++.......|..|+ .++.|+|||||||+|||++| |..||......... ..+..
T Consensus 842 KIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~--~~~~~ 919 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVL--LDVLE 919 (1025)
T ss_pred EEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHH--HHHHh
Confidence 99999999833 22333333334455554 45679999999999999999 67888744332211 11122
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.+ ++.-|.. +...+.+|+..||+.+|++||+|..|++.++.+.+
T Consensus 920 gg---RL~~P~~-------CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 920 GG---RLDPPSY-------CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred CC---ccCCCCC-------CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 22 2222222 23347899999999999999999999998887765
No 12
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-39 Score=339.76 Aligned_cols=259 Identities=19% Similarity=0.340 Sum_probs=196.7
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeec
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~ 550 (766)
.+.+++....+++.+...||+|+||+||||+|.. .||||.++... ....+.|+.|+.++++-||.||+-+.|||..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 4446677777777888999999999999999853 59999998654 3467899999999999999999999999997
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
+ ...+|+.+|++-+|+.+|+..+ ..++-.+.+.||.|||+||.|||.. .|||||||+.||++++++
T Consensus 460 p---------~~AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~ 525 (678)
T KOG0193|consen 460 P---------PLAIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDL 525 (678)
T ss_pred C---------ceeeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCC
Confidence 6 3599999999999999998654 3478888999999999999999997 899999999999999999
Q ss_pred cEEEecCCCCccccccccc-cc---------CCCCC---CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHh
Q 004232 631 IAKLSDYGLSIVSEDINSV-GG---------KQEDP---NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELD 697 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~-~~---------~~~~~---~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~ 697 (766)
.+||+|||++......... +. ..++. ..-.+++..+||||||||+|||+||.-||..... .+. +.
T Consensus 526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~-dqI-if 603 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR-DQI-IF 603 (678)
T ss_pred cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh-hhe-EE
Confidence 9999999998543221100 00 00000 0113467789999999999999999999862111 110 00
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+. +.-+-..|... ....+.+.|.+|+..||..++++||.|.+|+.+|+++..
T Consensus 604 -mV--GrG~l~pd~s~---~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 604 -MV--GRGYLMPDLSK---IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred -Ee--cccccCccchh---hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 01 11111112111 111234468889999999999999999999999888765
No 13
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-38 Score=323.41 Aligned_cols=243 Identities=22% Similarity=0.351 Sum_probs=181.8
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChh-------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKK-------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~-------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
+.|-+.+.+|+|+||.|-+|. ..+|+.||||.+++... .....+.+|+++|++++|||||++++++..++
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d-- 249 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD-- 249 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC--
Confidence 456778999999999999997 56899999999975431 12345689999999999999999999998874
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC---Cc
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RI 631 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~ 631 (766)
..|||||||++|+|.+.+-.++ .+....-..++.|+..|+.|||+. +|+||||||+|||+..+ ..
T Consensus 250 ------s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~l 317 (475)
T KOG0615|consen 250 ------SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCL 317 (475)
T ss_pred ------ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceE
Confidence 5799999999999999886543 256666678999999999999998 99999999999999755 78
Q ss_pred EEEecCCCCcccccccccccCCCCCCcc----------cCCCCCCCEeehhHHHHHHhcCCCccccCccc--hHHHHhhh
Q 004232 632 AKLSDYGLSIVSEDINSVGGKQEDPNSW----------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQF--LQEELDSL 699 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~~~~~~~~~~----------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~--~~~~~~~~ 699 (766)
+||+|||+|+.........+..++|.+. ..+.-+.|+||+||+||-+++|.+||...-.. ..+.+.
T Consensus 318 lKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~-- 395 (475)
T KOG0615|consen 318 LKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQIL-- 395 (475)
T ss_pred EEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHh--
Confidence 9999999999875432211111111111 12224779999999999999999999743221 222111
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+ ... +.|... .+--.+..+++.+.+..||++|||.+|+++.
T Consensus 396 --~G-~y~-f~p~~w----~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 396 --KG-RYA-FGPLQW----DRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred --cC-ccc-ccChhh----hhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11 111 111111 1223457899999999999999999999853
No 14
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-39 Score=337.38 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=199.0
Q ss_pred HHHHHHhcCCCcCCceecCCceeEEEEEecC-CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
++|+-...+..+.+.||-|.||.||.|.|+. ...||||.++.. ....++|..|..+|+.++|||+|+|+|+|..+.
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-- 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-- 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC--
Confidence 4454445567788999999999999999864 678999999764 456789999999999999999999999999763
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
.+|||+|||.+|+|.+||++... ..+.--..+.+|.||+.||+||... .+|||||.++|+|+.++..+||
T Consensus 337 ------PFYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 337 ------PFYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred ------CeEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEe
Confidence 68999999999999999987543 2355566788999999999999987 7899999999999999999999
Q ss_pred ecCCCCccccc-ccccccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccC
Q 004232 635 SDYGLSIVSED-INSVGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 635 ~DFGla~~~~~-~~~~~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
+|||++++... +++..+....|..| ..++.|+|||+|||+|||+.| |..|++. .+... +-.+...
T Consensus 407 ADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG--idlSq-VY~LLEk-- 481 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG--IDLSQ-VYGLLEK-- 481 (1157)
T ss_pred eccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC--ccHHH-HHHHHhc--
Confidence 99999987643 33222222223333 345679999999999999998 7888863 22211 1111111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
-.++-. ++.|...+.+|+..||+.+|.+||+|+||.+.++.+.+
T Consensus 482 gyRM~~-------PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 482 GYRMDG-------PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred cccccC-------CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 122222 23344568999999999999999999999999998765
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.6e-37 Score=335.10 Aligned_cols=253 Identities=22% Similarity=0.355 Sum_probs=187.9
Q ss_pred hcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~ 553 (766)
.++|++.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+.+++++ +|||||+++|+|.+.+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~- 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN- 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC-
Confidence 46788899999999999999973 235689999997543 23456788999999999 8999999999987653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCC--------------------------------------------------
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------------------------------------------- 583 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------------------- 583 (766)
..+++||||+++|+|.+++.....
T Consensus 85 ------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T cd05102 85 ------GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTN 158 (338)
T ss_pred ------CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccc
Confidence 257999999999999998865321
Q ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccccc---cc-
Q 004232 584 ---------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINS---VG- 650 (766)
Q Consensus 584 ---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~---~~- 650 (766)
...+++.....++.||++||+|||+. +|+||||||+|||+++++.+||+|||+++....... .+
T Consensus 159 ~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~ 235 (338)
T cd05102 159 PPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGS 235 (338)
T ss_pred cchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccC
Confidence 12478888999999999999999997 899999999999999999999999999865322111 00
Q ss_pred ------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHH
Q 004232 651 ------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLS 723 (766)
Q Consensus 651 ------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 723 (766)
+..++......++.++|||||||++|||+| |..||....... .....+. ....... + .. ...
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~-~~~~~~~--~---~~----~~~ 304 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLK-DGTRMRA--P---EN----ATP 304 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHh-cCCCCCC--C---CC----CCH
Confidence 111111122345678999999999999997 999986432211 1111111 1111110 1 11 123
Q ss_pred HHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 724 IVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 724 ~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.+.+++.+||+.||.+||+|.||+++|+.+.+
T Consensus 305 ~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 305 EIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 47789999999999999999999999998764
No 16
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-38 Score=308.46 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=189.2
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.+|++.++||+|+||.|||++ ..+|..||.|.++-. +....+....|+.+|++++|||||++++.-...+.
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~------ 92 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN------ 92 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc------
Confidence 457778899999999999998 678999999998732 34556788999999999999999999984333221
Q ss_pred ceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCceEEcCCCcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPG--FFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrdlk~~NILld~~~~~kl~D 636 (766)
+.++||||||..|||.+.++.-+ ..+.++....+++..|+++||.++|. ..|. |+||||||.||+|+.+|.+|++|
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~-~~~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHS-KIPRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhc-cccccceeeccCcchheEEcCCCceeecc
Confidence 24899999999999999886532 23457888999999999999999998 3345 99999999999999999999999
Q ss_pred CCCCcccccccccccCC-CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSVGGKQ-EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~~~~~-~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||+++..+...+.+... ++|.+ ...+..|+||||+||++|||+.-.+||..+ .....-..+ .++...++
T Consensus 172 fGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI-~qgd~~~~ 248 (375)
T KOG0591|consen 172 FGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKI-EQGDYPPL 248 (375)
T ss_pred chhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHH-HcCCCCCC
Confidence 99998876544332211 12221 245678999999999999999999999744 222221222 12222222
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
.| +.-...+..|+..|++.||..||+.-.++..++.
T Consensus 249 p~--------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 PD--------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cH--------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 21 1122346788999999999999996666666654
No 17
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=321.28 Aligned_cols=259 Identities=19% Similarity=0.273 Sum_probs=190.6
Q ss_pred cccCHHHHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhh---hHHHHHHHHHHHHhCCCCCcccccce
Q 004232 471 RSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY---TVRNLKLRLDLLAKLRHPHLVCLLGH 547 (766)
Q Consensus 471 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~~e~~~l~~l~Hpniv~l~g~ 547 (766)
+.++.+++. ......||+|++|.||+|.+ +|+.||||.++..... ..+.+.+|+.+|++++|||||+++|+
T Consensus 13 ~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~ 86 (283)
T PHA02988 13 KCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGF 86 (283)
T ss_pred eecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeee
Confidence 345555552 22236799999999999998 5889999999764332 25778899999999999999999999
Q ss_pred eecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc
Q 004232 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (766)
Q Consensus 548 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 627 (766)
+.+... .....++||||+++|+|.+++.+.. .++|..+..++.+++.|++|||+.. +++||||||+||+++
T Consensus 87 ~~~~~~----~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~ 157 (283)
T PHA02988 87 IIDIVD----DLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVT 157 (283)
T ss_pred EEeccc----CCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEEC
Confidence 876210 0135799999999999999997643 4889999999999999999999742 567999999999999
Q ss_pred CCCcEEEecCCCCcccccccc--cc---cCCCCCCc--ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh
Q 004232 628 EHRIAKLSDYGLSIVSEDINS--VG---GKQEDPNS--WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 628 ~~~~~kl~DFGla~~~~~~~~--~~---~~~~~~~~--~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 700 (766)
+++.+||+|||+++....... .+ +.+++... ...++.++|||||||++|||+||+.||..... ......+.
T Consensus 158 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i~ 235 (283)
T PHA02988 158 ENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLII 235 (283)
T ss_pred CCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH
Confidence 999999999999875432211 11 11111111 13466799999999999999999999974321 12222221
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.......+ | .. ....+.+++.+||+.||.+||||+||++.|+...+
T Consensus 236 ~~~~~~~~--~---~~----~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 236 NKNNSLKL--P---LD----CPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred hcCCCCCC--C---Cc----CcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 11111111 1 01 12247789999999999999999999999998764
No 18
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.3e-37 Score=303.27 Aligned_cols=252 Identities=21% Similarity=0.306 Sum_probs=179.4
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+.|+....+|+|+||+|||++. ++|+.||||++.... ..-.+-..||+++|++++|||+|.|+.+|....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr------- 74 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR------- 74 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc-------
Confidence 3466778899999999999995 579999999996543 233455679999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
.++||+|||..--|.+ |.+... .++.....++..|+++|+.|+|++ ++|||||||+|||+..++.+|+||||+
T Consensus 75 -klhLVFE~~dhTvL~e-Le~~p~--G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 75 -KLHLVFEYCDHTVLHE-LERYPN--GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred -eeEEEeeecchHHHHH-HHhccC--CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 7899999999855544 443322 377888899999999999999998 799999999999999999999999999
Q ss_pred Ccccccccc-----cccCC---CCC-CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH-Hh-----------h
Q 004232 640 SIVSEDINS-----VGGKQ---EDP-NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE-LD-----------S 698 (766)
Q Consensus 640 a~~~~~~~~-----~~~~~---~~~-~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~-~~-----------~ 698 (766)
|+....... ++++. ++. ..-..+....||||.||++.||+||.+-|+...+..+-. +. +
T Consensus 148 AR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~ 227 (396)
T KOG0593|consen 148 ARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS 227 (396)
T ss_pred hHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH
Confidence 987653211 11111 110 111345667899999999999999998777544322111 10 1
Q ss_pred hhcc-cC--cccccccc---ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 699 LNSQ-EG--RQRLVDPV---VMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 699 ~~~~-~~--~~~~~d~~---~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+... +. -..+++|. .....-......+++++..|++.||++|++-+|++.
T Consensus 228 iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 228 IFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1100 00 01111211 111100112235789999999999999999888763
No 19
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=328.08 Aligned_cols=252 Identities=23% Similarity=0.397 Sum_probs=194.4
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
....+.+.||+|.||.|..+..+.+..||||.++... +..+++|.+|+++|.+++|||||+|+|+|..++ .
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De--------P 609 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD--------P 609 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC--------c
Confidence 3455678999999999999999888999999998764 445689999999999999999999999999864 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+++|+|||++|+|.+++.++.... ++-....+|+.|||.||+||.+. .+||||+.++|||+|.++++||+|||+++
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCccccc
Confidence 899999999999999998875322 34455678999999999999997 79999999999999999999999999997
Q ss_pred cc--ccccccccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcC--CCccccCccc-hHHHHhhhhcccCcccc
Q 004232 642 VS--EDINSVGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAG--PSVAARKGQF-LQEELDSLNSQEGRQRL 708 (766)
Q Consensus 642 ~~--~~~~~~~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG--~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 708 (766)
-. .+.....++.-.|..| ..++.++|||+|||++||+++- ..|+....+. ..+....+........+
T Consensus 686 ~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 686 NLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred ccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee
Confidence 43 3444444444344444 3567899999999999999874 6777532221 11222222222211111
Q ss_pred -ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 709 -VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 709 -~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
..|. .+...+.+++.+||..|-.+||+|+++...||+-
T Consensus 766 l~~P~-------~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPP-------ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCC-------cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1121 2233477999999999999999999999999874
No 20
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=5e-38 Score=329.52 Aligned_cols=233 Identities=24% Similarity=0.369 Sum_probs=177.3
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYE 567 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~E 567 (766)
.+-||+|+-|.||+|++. ++.||||+++..+ +.+|+-|++++|||||.|.|+|... ..+|||||
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqs--------PcyCIiME 192 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQS--------PCYCIIME 192 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCC--------ceeEEeee
Confidence 467999999999999997 5789999875443 3467889999999999999999986 37999999
Q ss_pred ccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccc
Q 004232 568 FMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN 647 (766)
Q Consensus 568 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~ 647 (766)
||+.|-|...|+... +++.........+||.||.|||.+ .|||||||+-||||..+-.+||+|||-++...+..
T Consensus 193 fCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S 266 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS 266 (904)
T ss_pred ccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhhhhh
Confidence 999999999998654 366667778889999999999998 78999999999999999999999999998765542
Q ss_pred cc---cc----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHH
Q 004232 648 SV---GG----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLE 720 (766)
Q Consensus 648 ~~---~~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 720 (766)
+. .+ ..++....++...|+||||||||||||+||..||..-....+ ++-+.. +...+.-| ..
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI--IwGVGs--NsL~LpvP-------st 335 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI--IWGVGS--NSLHLPVP-------ST 335 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee--EEeccC--CcccccCc-------cc
Confidence 21 11 112222334556799999999999999999999863221111 111100 11111111 12
Q ss_pred HHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 721 SLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 721 ~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
+..-+.-|+++||...|..||+|+||+..|+-+
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 223355678999999999999999999999754
No 21
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=315.24 Aligned_cols=248 Identities=21% Similarity=0.339 Sum_probs=185.0
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++...+.||+|+||.||++... +|...|||.+........+.+.+|+.+|++++|||||+++|.....+. ..+
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~------~~~ 91 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN------DEY 91 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC------eee
Confidence 4556789999999999999864 499999999876543336779999999999999999999997544321 258
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCCCCc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYGLSI 641 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFGla~ 641 (766)
++.|||+++|+|.+++.+.+. .++.....++..+|++||+|||++ +|+||||||+|||++. ++.+||+|||+++
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~ 166 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAK 166 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccc
Confidence 999999999999999987653 489999999999999999999987 9999999999999999 7999999999997
Q ss_pred cccc--cc-----ccccCC--CCCCccc-C--CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 642 VSED--IN-----SVGGKQ--EDPNSWE-M--TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 642 ~~~~--~~-----~~~~~~--~~~~~~~-~--~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
.... .. ...+++ ..|..+. . ...++||||+||++.||+||++|+... .....+...+........+.
T Consensus 167 ~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~~~~~~~~~ig~~~~~P~ip 245 (313)
T KOG0198|consen 167 KLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-FEEAEALLLIGREDSLPEIP 245 (313)
T ss_pred ccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-cchHHHHHHHhccCCCCCCC
Confidence 6542 11 011111 1122222 1 223899999999999999999998742 11112222222211111221
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
...+ ....+++.+|++.||.+|||+++++..-..
T Consensus 246 -----~~ls----~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 246 -----DSLS----DEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred -----cccC----HHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 1111 236688899999999999999999887554
No 22
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-37 Score=310.07 Aligned_cols=234 Identities=24% Similarity=0.366 Sum_probs=179.9
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.++||+|+||+||.++. ++++..|+|++++.. ....+....|..+|.+++||.||+++-.+.+.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~----- 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE----- 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-----
Confidence 46799999999999999999984 579999999998754 334677889999999999999999997777764
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.+|||+||+.||+|+.+|++.+. ++......++.+|+.||.|||+. +||||||||+|||||++|+++++||
T Consensus 99 ---kLylVld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDF 169 (357)
T KOG0598|consen 99 ---KLYLVLDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDF 169 (357)
T ss_pred ---eEEEEEeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEecc
Confidence 79999999999999999986542 66777777899999999999997 8999999999999999999999999
Q ss_pred CCCccccccc----ccccCCCCC----CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDIN----SVGGKQEDP----NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~----~~~~~~~~~----~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|+++...... +..++.++. .....++..+|+||+||++|||++|.+||... ........+.... . ..
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~--~~~~~~~~I~~~k-~--~~ 244 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE--DVKKMYDKILKGK-L--PL 244 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc--cHHHHHHHHhcCc-C--CC
Confidence 9998543221 111222211 11235667899999999999999999999743 2333333333221 0 01
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCC
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRP 741 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP 741 (766)
-|.. .+ ..+.+++.+-+..||++|-
T Consensus 245 ~p~~---ls----~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 245 PPGY---LS----EEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CCcc---CC----HHHHHHHHHHhccCHHHhc
Confidence 1111 11 2256888899999999994
No 23
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-36 Score=316.94 Aligned_cols=255 Identities=19% Similarity=0.295 Sum_probs=186.1
Q ss_pred hcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.+.|+..++||+|.||.||||+ ..+|+.||+|++.-.. .....-..|||.||++++|||||+|.+...+..+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~----- 190 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS----- 190 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC-----
Confidence 3457777899999999999998 6789999999986543 4456678899999999999999999999887621
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..+|||+|||++ ||.-++... +..++..+...++.|++.||+|||++ +|+|||||.+|||||.+|.+||+|||
T Consensus 191 -~siYlVFeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 191 -GSIYLVFEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred -ceEEEEEecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 368999999998 888877542 34588899999999999999999998 89999999999999999999999999
Q ss_pred CCcccccccccccCC---------C-CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc----
Q 004232 639 LSIVSEDINSVGGKQ---------E-DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE---- 703 (766)
Q Consensus 639 la~~~~~~~~~~~~~---------~-~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~---- 703 (766)
||++.........+. + .......|+.+.|+||.||||.||++|++.+....... .+.+-.+.-..
T Consensus 264 LAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~ 343 (560)
T KOG0600|consen 264 LARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDY 343 (560)
T ss_pred ceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhc
Confidence 998764433221111 1 11112456778999999999999999998876432211 11111111100
Q ss_pred C-cccc-----ccccccCCCC-HH----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 G-RQRL-----VDPVVMATSS-LE----SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~-~~~~-----~d~~~~~~~~-~~----~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+ ..++ +.|...-... .| ....+++|+...+..||++|.|+.+++.
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 0 0111 1111000000 01 1234688899999999999999998864
No 24
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-37 Score=323.08 Aligned_cols=246 Identities=24% Similarity=0.422 Sum_probs=193.4
Q ss_pred CCCcCCceecCCceeEEEEEecC-----CceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLEN-----GTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
...+.++||+|.||.||+|.+.+ ...||||..+.. .....+.|..|..+|+.++|||||+|+|+|.+.
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------ 463 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------ 463 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------
Confidence 34556889999999999998632 235899988773 455578899999999999999999999999874
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..|+|||.++-|.|+.||+.+.. .++......++.||..||+|||+. .+|||||.++|||+...-.+|++||
T Consensus 464 ---P~WivmEL~~~GELr~yLq~nk~--sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 464 ---PMWIVMELAPLGELREYLQQNKD--SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred ---ceeEEEecccchhHHHHHHhccc--cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeeccc
Confidence 68999999999999999987653 377788889999999999999997 7999999999999999999999999
Q ss_pred CCCcccccccc-cccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccc
Q 004232 638 GLSIVSEDINS-VGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 638 Gla~~~~~~~~-~~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|+++..++... .+.++..|..| ..++.++|||-|||.+||++. |..||..-.. . +.+...+.-.+
T Consensus 536 GLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN--s---DVI~~iEnGeR 610 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN--S---DVIGHIENGER 610 (974)
T ss_pred chhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc--c---ceEEEecCCCC
Confidence 99998765432 22233444444 345678999999999999986 7888852111 0 11111122222
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..-|. .+...+..|+.+||++||.+||.|.|+...|.++.+
T Consensus 611 lP~P~-------nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 611 LPCPP-------NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCC-------CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 22222 234457899999999999999999999999998876
No 25
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-35 Score=316.41 Aligned_cols=251 Identities=22% Similarity=0.362 Sum_probs=181.3
Q ss_pred cCCCcCCceecCCceeEEEEEecC-----------------CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN-----------------GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCL 544 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l 544 (766)
++|.+.+.||+|+||.||+|+..+ +..||+|.+.... .....++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788999999999999997532 3479999987643 3345679999999999999999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCC----------------CCCCCCHHHHHHHHHHHHHHHHHHhc
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT----------------PGKVLNWSERLAVLIGVAKAVQFLHT 608 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~gL~yLH~ 608 (766)
+|++.+.+ ..++||||+++|+|.+++.... ....++|.....++.|++.||+|||+
T Consensus 85 ~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 85 LGVCVDED--------PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred EEEEecCC--------ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99998753 6899999999999999885431 11247888999999999999999999
Q ss_pred CCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccccc--ccc--------CCCCCCcccCCCCCCCEeehhHHHHHH
Q 004232 609 GVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINS--VGG--------KQEDPNSWEMTKLEDDVFSFGFMLLES 678 (766)
Q Consensus 609 ~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~--~~~--------~~~~~~~~~~~~~~~DV~SfGvil~El 678 (766)
. +|+||||||+|||+++++.+||+|||+++....... ... ..++......++.++|||||||++|||
T Consensus 157 ~---~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 233 (304)
T cd05096 157 L---NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233 (304)
T ss_pred C---CccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 7 899999999999999999999999999865422110 000 011111123456789999999999999
Q ss_pred hcC--CCccccCcc-chHHHHhhhhcccCc-cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 679 VAG--PSVAARKGQ-FLQEELDSLNSQEGR-QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 679 ltG--~~p~~~~~~-~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
+++ ..|+..... ............... .....+ .. ....+.+++.+||+.||.+||||.||.+.|+
T Consensus 234 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 234 LMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRP---PP----CPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCC---CC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 974 455543211 111111111111100 011111 11 1234788999999999999999999998876
No 26
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=3.1e-36 Score=330.74 Aligned_cols=251 Identities=23% Similarity=0.372 Sum_probs=186.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
..++|++.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+.+++.+ +|||||+++|+|.+.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345788899999999999999973 246689999997543 33456788999999999 8999999999998764
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------------------------------------------
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTP------------------------------------------------- 583 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------------------- 583 (766)
..++||||+++|+|.+++++...
T Consensus 113 --------~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 113 --------PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred --------cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 67999999999999998864321
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 584 -----------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 584 -----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
...++|.....++.+|++||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a 261 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLA 261 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccc
Confidence 12478899999999999999999987 8999999999999999999999999998
Q ss_pred ccccccccc--c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccc
Q 004232 641 IVSEDINSV--G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 641 ~~~~~~~~~--~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
+........ . +..++......++.++|||||||++|||+| |..|+...... ..... ....... ..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~-~~~~~~~--~~ 337 (375)
T cd05104 262 RDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYK-MIKEGYR--ML 337 (375)
T ss_pred eeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHH-HHHhCcc--CC
Confidence 654322110 0 111111112345678999999999999998 78887532211 11111 1111111 11
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.+. .. ...+.+|+.+||+.||++||+|+||+++|++.
T Consensus 338 ~~~---~~----~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 338 SPE---CA----PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCC---CC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111 11 12477899999999999999999999999863
No 27
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-36 Score=315.03 Aligned_cols=244 Identities=20% Similarity=0.338 Sum_probs=186.7
Q ss_pred HHHhcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCC
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~ 553 (766)
++...+|.+.++||+|+|.+||+|+ ..++..+|||++.+.. ....+.+.+|-.+|.+| .||.||+|+--|.|..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~- 147 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE- 147 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-
Confidence 4456789999999999999999998 4579999999997642 23345678888999999 8999999998887764
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
.+|+|+||+++|+|.++|++.+. ++......++.+|..||+|||++ +||||||||+|||||++|++|
T Consensus 148 -------sLYFvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 148 -------SLYFVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred -------ceEEEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 79999999999999999987643 77777888999999999999998 999999999999999999999
Q ss_pred EecCCCCcccccccccc-----------------cCCC----CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch
Q 004232 634 LSDYGLSIVSEDINSVG-----------------GKQE----DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL 692 (766)
Q Consensus 634 l~DFGla~~~~~~~~~~-----------------~~~~----~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~ 692 (766)
|+|||-|+...+..... ++.+ +.......+..+|+|+||||||+|++|++||.....+.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl 294 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL 294 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence 99999998764322110 0000 00111234557899999999999999999997654433
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. +.++..-+ .++ ....+ ..+.+|+.+.+..||.+|++..||-+.
T Consensus 295 i--FqkI~~l~--y~f-----p~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 295 I--FQKIQALD--YEF-----PEGFP----EDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred H--HHHHHHhc--ccC-----CCCCC----HHHHHHHHHHHccCccccccHHHHhhC
Confidence 2 22221110 111 11111 336789999999999999999777553
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=315.53 Aligned_cols=255 Identities=18% Similarity=0.280 Sum_probs=187.7
Q ss_pred hcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhH-HHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTV-RNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~-~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.+.|.+.+.||.|.||.||+|+ .++|+.||||+++..-.... -.=.||+..|++++ |||||++..++.+.+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~------ 82 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDND------ 82 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccC------
Confidence 4567788999999999999998 56799999999976432221 12357999999999 999999999998864
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..+++|||||.. +|++.++++ .+.++......|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+|||
T Consensus 83 -~~L~fVfE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 83 -RILYFVFEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred -ceEeeeHHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccc
Confidence 379999999997 899998876 46799999999999999999999998 99999999999999999999999999
Q ss_pred CCccccccccc----ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH-HhhhhcccCccc--
Q 004232 639 LSIVSEDINSV----GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE-LDSLNSQEGRQR-- 707 (766)
Q Consensus 639 la~~~~~~~~~----~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~-~~~~~~~~~~~~-- 707 (766)
+|+........ .++ ++.......++.+.|+||+|||++|+.+-++-|+......+-+ +-++........
T Consensus 156 LARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 156 LAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred cccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 99876432211 111 1111223456778999999999999999988787433221111 111111110000
Q ss_pred ----------cccccccCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 ----------LVDPVVMATS----SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ----------~~d~~~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.-|...+.. -..+..++++++.+|++.||.+|||+.|.+++
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1111111100 01134567899999999999999999998875
No 29
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.1e-35 Score=285.07 Aligned_cols=249 Identities=20% Similarity=0.299 Sum_probs=184.0
Q ss_pred CCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhh--hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKY--TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~--~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.|...+.+|+|.||.||+|+ ..+|+.||||+++..... -.....|||+.|+.++|||||.+++++-+.+
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-------- 74 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-------- 74 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC--------
Confidence 46667899999999999998 568999999999765332 2456789999999999999999999987764
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
.+-||+|||+. ||...++... ..++..+...++.++.+|++|||++ .|+||||||.|+|++++|.+||+|||+|
T Consensus 75 ~l~lVfEfm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLA 148 (318)
T KOG0659|consen 75 NLSLVFEFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLA 148 (318)
T ss_pred ceEEEEEeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccch
Confidence 68999999997 8998887653 5688889999999999999999998 7899999999999999999999999999
Q ss_pred cccccccccc-----cCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh---cccCcc--
Q 004232 641 IVSEDINSVG-----GKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN---SQEGRQ-- 706 (766)
Q Consensus 641 ~~~~~~~~~~-----~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~---~~~~~~-- 706 (766)
+......... ++. +.......++...|+||.|||+.||+-|.+-+....+ .+.+..+. ......
T Consensus 149 r~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD--idQL~~If~~LGTP~~~~W 226 (318)
T KOG0659|consen 149 RFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD--IDQLSKIFRALGTPTPDQW 226 (318)
T ss_pred hccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch--HHHHHHHHHHcCCCCcccC
Confidence 8764332211 111 1111224566788999999999999999866653322 22221111 111111
Q ss_pred ----ccc---------cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 ----RLV---------DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ----~~~---------d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+. .+.... .-..+...+++++...+.+||.+|.+..|++++
T Consensus 227 P~~~~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 227 PEMTSLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 111 111100 001223446899999999999999999998765
No 30
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.7e-36 Score=326.56 Aligned_cols=252 Identities=24% Similarity=0.368 Sum_probs=186.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
..++|++.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++++ +|||||+++|+|.+.+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 445788899999999999999873 234579999997543 33456788999999999 8999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCC--------------------------------------------------
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENT-------------------------------------------------- 582 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------------------------------------------- 582 (766)
..++||||+++|+|.+++++..
T Consensus 116 --------~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (374)
T cd05106 116 --------PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV 187 (374)
T ss_pred --------CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence 6899999999999999885421
Q ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccc
Q 004232 583 -----------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSED 645 (766)
Q Consensus 583 -----------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~ 645 (766)
....+++....+++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~ 264 (374)
T cd05106 188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMN 264 (374)
T ss_pred cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccC
Confidence 012478888999999999999999997 899999999999999999999999999865322
Q ss_pred ccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 646 INS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 646 ~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
... .. +..++......++.++|||||||++|||++ |+.||...... ..+........ +...+.
T Consensus 265 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--~~~~~~~~~~~--~~~~~~-- 338 (374)
T cd05106 265 DSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--SKFYKMVKRGY--QMSRPD-- 338 (374)
T ss_pred CcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--HHHHHHHHccc--CccCCC--
Confidence 111 00 001111112345678999999999999997 99998642211 11111111110 111111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.. ...+.+++.+||+.||.+||++.+|+++|+++.
T Consensus 339 -~~----~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 339 -FA----PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -CC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 11 134778999999999999999999999999864
No 31
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.2e-35 Score=313.95 Aligned_cols=247 Identities=22% Similarity=0.370 Sum_probs=186.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCc----eEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGT----SVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|+..+.||+|+||.||+|++. +|+ .||||.++... ....+++.+|+.+++.++||||++++|+|...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~----- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-----
Confidence 45888999999999999999853 344 38999987543 34467888999999999999999999999764
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++|+||+++|+|.+++.+.. ..+++...+.++.||+.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 82 ----~~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 82 ----TVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred ----CceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 4689999999999999997653 2478999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc----c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV----G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~----~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ . +..++.......+.++|||||||++|||+| |+.|+...... .+..+....
T Consensus 153 fG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~---~~~~~~~~~-- 227 (316)
T cd05108 153 FGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS---EISSILEKG-- 227 (316)
T ss_pred ccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHhCC--
Confidence 9999764321110 0 001111112345668999999999999998 99888643221 111221111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.....+. .. ...+.+++.+||+.+|.+||+|.+|+..+..+..
T Consensus 228 ~~~~~~~---~~----~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 228 ERLPQPP---IC----TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCC---CC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 1111111 11 1236789999999999999999999999987764
No 32
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-36 Score=326.79 Aligned_cols=241 Identities=24% Similarity=0.373 Sum_probs=189.2
Q ss_pred CCceecCCceeEEEEEec-C----CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 488 SAIMGEGSYGKLYKGRLE-N----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~-~----g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
..+||+|+||+||||.|- . ..+||||++.... .....++.+|+-+|++++|||+++|+|+|..+ .
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s---------~ 771 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS---------T 771 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc---------h
Confidence 578999999999999863 3 3579999886543 44568899999999999999999999999875 4
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+.||++|||.|.|.+|++.++. .+.....+.+..|||+||.|||.+ .++||||.++|||+.+-.++||+|||+++
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhh
Confidence 7899999999999999987653 477888999999999999999987 78999999999999999999999999998
Q ss_pred ccccccc-c-ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccc
Q 004232 642 VSEDINS-V-GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 642 ~~~~~~~-~-~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
....... . ...+..+..| ..++.++|||||||.+||++| |..|++... .+++....+.+. ++.-
T Consensus 847 ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~---~~eI~dlle~ge--RLsq 921 (1177)
T KOG1025|consen 847 LLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP---AEEIPDLLEKGE--RLSQ 921 (1177)
T ss_pred ccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC---HHHhhHHHhccc--cCCC
Confidence 7643221 1 1122233333 457789999999999999998 788886432 222333332221 2333
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
|.+ +...+..++.+||..|++.||+|+++.....+++
T Consensus 922 Ppi-------CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a 958 (1177)
T KOG1025|consen 922 PPI-------CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA 958 (1177)
T ss_pred CCC-------ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence 322 2334778899999999999999999988887765
No 33
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.6e-35 Score=303.18 Aligned_cols=242 Identities=22% Similarity=0.403 Sum_probs=184.5
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|++.++..+|+|.+.... ...+++.+|++++++++||||++++++|.+.+ ..
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~ 74 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK--------PL 74 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCC--------CE
Confidence 4577788999999999999998888899999886443 23467889999999999999999999987653 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.++++... ..++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 75 ~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~ 149 (256)
T cd05114 75 YIVTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRY 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccc
Confidence 99999999999999987543 2478999999999999999999987 899999999999999999999999999865
Q ss_pred ccccccc---c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSV---G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~---~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
....... . ...++.......+.++|||||||++|||++ |+.|+..... .+....+.... ....|.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~---~~~~~~ 224 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGF---RLYRPK 224 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCC---CCCCCC
Confidence 3221110 0 011111112334568999999999999999 8888864322 22222221111 111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
. . ...+.+++.+||+.+|++||+|.|+++.|
T Consensus 225 ~---~----~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 L---A----SMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred C---C----CHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1 1 12478999999999999999999999886
No 34
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.2e-35 Score=309.41 Aligned_cols=240 Identities=29% Similarity=0.502 Sum_probs=174.9
Q ss_pred cCCceecCCceeEEEEEec-----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 487 MSAIMGEGSYGKLYKGRLE-----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..+.||.|.||.||+|.+. .+..|+||.++... ....+.+.+|++.+++++||||++++|+|...+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-------- 74 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-------- 74 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS--------
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc--------
Confidence 3578999999999999976 36789999996543 344788999999999999999999999999543
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+++|+|.++|.... ...+++..+..++.|||+||+|||+. +++||||+++||++++++.+||+|||++
T Consensus 75 ~~~lv~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 75 PLFLVMEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp SEEEEEE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred cccccccccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 5899999999999999998762 23589999999999999999999997 7999999999999999999999999998
Q ss_pred ccccccccc--ccCCCCCCc--------ccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccc
Q 004232 641 IVSEDINSV--GGKQEDPNS--------WEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 641 ~~~~~~~~~--~~~~~~~~~--------~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
......... ......+.. ...++.++||||||+++||++| |+.|+... ........+ ........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~-~~~~~~~~- 226 (259)
T PF07714_consen 151 RPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKL-KQGQRLPI- 226 (259)
T ss_dssp EETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHH-HTTEETTS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccc-ccccccee-
Confidence 655211110 000001111 1234668999999999999999 67777533 222222222 11111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
+ ... ...+.+++.+||+.+|.+||+|.+|++.|
T Consensus 227 -~---~~~----~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 227 -P---DNC----PKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -B---TTS----BHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -c---cch----hHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 111 12367899999999999999999999876
No 35
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.7e-35 Score=305.60 Aligned_cols=246 Identities=21% Similarity=0.348 Sum_probs=184.7
Q ss_pred cCCCcCCceecCCceeEEEEEec----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|.+. .+..||+|.++... ....+.+.+|+.++++++||||++++|++...+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN----- 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-----
Confidence 45788899999999999999753 46789999987653 334567899999999999999999999987653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.... ..++|..++.++.+++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 80 ---~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~df 151 (266)
T cd05064 80 ---TMMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGF 151 (266)
T ss_pred ---CcEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCC
Confidence 6899999999999999987543 3488999999999999999999987 8999999999999999999999999
Q ss_pred CCCcccccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccc
Q 004232 638 GLSIVSEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 638 Gla~~~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|.+.......... ...++.......+.++|||||||++||+++ |+.|+..... ......+. ... .
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~-~~~--~ 226 (266)
T cd05064 152 RRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--QDVIKAVE-DGF--R 226 (266)
T ss_pred cccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHH-CCC--C
Confidence 9875432111000 011111122345668999999999999775 9999864322 11111111 111 1
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
...+ . .....+.+++.+||+.+|.+||+++||.+.|..+
T Consensus 227 ~~~~---~----~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 227 LPAP---R----NCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCC---C----CCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 1111 1 1123477899999999999999999999998764
No 36
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-35 Score=283.10 Aligned_cols=243 Identities=18% Similarity=0.313 Sum_probs=190.8
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|.||.||.|+. +++..||+|++.+.. ....+++.+|++|-+.++||||++++|++.+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~----- 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK----- 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc-----
Confidence 46899999999999999999985 468899999996643 233578999999999999999999999999864
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.+||++||.++|++...|++.. ...++......++.|+|.|+.|+|.. .|+||||||+|+|++..+..||+||
T Consensus 96 ---riyLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdf 168 (281)
T KOG0580|consen 96 ---RIYLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADF 168 (281)
T ss_pred ---eeEEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCC
Confidence 7999999999999999998543 34477777888999999999999996 8999999999999999999999999
Q ss_pred CCCcccccccccc------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 638 GLSIVSEDINSVG------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 638 Gla~~~~~~~~~~------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
|-+.......+.. +-+++.......+...|+|++||+.||++.|.+||.... ..+...++.. .++.+|
T Consensus 169 GwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--~~etYkrI~k----~~~~~p 242 (281)
T KOG0580|consen 169 GWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--HSETYKRIRK----VDLKFP 242 (281)
T ss_pred CceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--hHHHHHHHHH----ccccCC
Confidence 9986654322111 112222333445567899999999999999999997433 2222333332 234444
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.... ..+.+++.+|+..+|.+|.+..||+..
T Consensus 243 ~~is-------~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 243 STIS-------GGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred cccC-------hhHHHHHHHHhccCccccccHHHHhhh
Confidence 2221 226789999999999999999999754
No 37
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=312.26 Aligned_cols=241 Identities=24% Similarity=0.376 Sum_probs=184.3
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC----hh-hhHHHHHHHHHHHHhCC-CCCcccccceeecCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS----KK-YTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGG 553 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~----~~-~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~ 553 (766)
..+.|.+.+.||+|+||+||.|+. .+|..||||.+... .. ...+.+.+|+.++++++ ||||++++.++..+.
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~- 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT- 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC-
Confidence 356788999999999999999974 57899999977653 12 23556778999999999 999999999988764
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIA 632 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~ 632 (766)
.+++||||+.+|+|.+++.+.. .+......+++.|++.|++|||++ +|+||||||+|||+|.+ +++
T Consensus 94 -------~~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~ 160 (370)
T KOG0583|consen 94 -------KIYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNL 160 (370)
T ss_pred -------eEEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCE
Confidence 6999999999999999998743 377788899999999999999997 89999999999999999 999
Q ss_pred EEecCCCCcccc-ccccc----cc---CCCCCCcc-c-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc
Q 004232 633 KLSDYGLSIVSE-DINSV----GG---KQEDPNSW-E-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 633 kl~DFGla~~~~-~~~~~----~~---~~~~~~~~-~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
||+|||++.... ..... ++ ..++.... . +...++||||+||+||.|++|+.||+... .......+...
T Consensus 161 Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--~~~l~~ki~~~ 238 (370)
T KOG0583|consen 161 KLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--VPNLYRKIRKG 238 (370)
T ss_pred EEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--HHHHHHHHhcC
Confidence 999999998762 21111 11 11111111 2 33468899999999999999999998532 22222222211
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDIL 747 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~ 747 (766)
...+ |.... -..+..++.+|++.||.+|+++.+|+
T Consensus 239 --~~~~--p~~~~------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 --EFKI--PSYLL------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred --CccC--CCCcC------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 1111 11110 12367899999999999999999998
No 38
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-35 Score=299.23 Aligned_cols=251 Identities=20% Similarity=0.337 Sum_probs=186.7
Q ss_pred hcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..+|++.++||.|.-++||+|+ .+.++.||||++.-.+- ...+.+.+|+..|+.++||||++++..|...
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~-------- 96 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD-------- 96 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEec--------
Confidence 3578999999999999999998 45789999999975543 3468899999999999999999999887765
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..+|+||.||.+|++.+.++..-+ ..++...+..|.+++.+||.|||++ |-||||+|+.|||||++|.+||+|||+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCcee
Confidence 379999999999999998876432 2378888889999999999999998 889999999999999999999999999
Q ss_pred Ccccccccc-cc---cCCCCCCcc----------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 640 SIVSEDINS-VG---GKQEDPNSW----------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 640 a~~~~~~~~-~~---~~~~~~~~~----------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
+....+... .. .+.....+| ..|+.|+||||||++..|+.+|..||...... ......+......
T Consensus 173 sa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-kvLl~tLqn~pp~ 251 (516)
T KOG0582|consen 173 SASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-KVLLLTLQNDPPT 251 (516)
T ss_pred eeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCCCC
Confidence 754322111 00 011111223 34567999999999999999999999754321 1111122111100
Q ss_pred cc--cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QR--LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~--~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ..|... ....-..+.+++..|+++||++|||++++++.
T Consensus 252 ~~t~~~~~d~----~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 252 LLTSGLDKDE----DKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccccCChHH----hhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 00 011100 01112346788899999999999999998864
No 39
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.2e-34 Score=304.88 Aligned_cols=252 Identities=23% Similarity=0.405 Sum_probs=190.6
Q ss_pred cCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|.+.+.||+|+||+||++.. .++..+|+|.+........+.+.+|++++++++||||++++++|...+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 80 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 4678889999999999999974 235679999987766566778999999999999999999999988653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP----------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
..++||||+++|+|.+++..... ...+++..+..++.+++.||+|||+. +++||||||+||++
T Consensus 81 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili 153 (288)
T cd05093 81 ----PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLV 153 (288)
T ss_pred ----ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 68999999999999999875421 12489999999999999999999987 89999999999999
Q ss_pred cCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHH
Q 004232 627 NEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEE 695 (766)
Q Consensus 627 d~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~ 695 (766)
++++.+||+|||+++....... .. +..++......++.++|||||||++|||+| |..|+..... ...
T Consensus 154 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--~~~ 231 (288)
T cd05093 154 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEV 231 (288)
T ss_pred ccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 9999999999999864322110 00 111111112345668999999999999999 8888753321 111
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
...+.. ...... + ...+ ..+.+++.+||+.+|.+||++.||.+.|+.+.+..
T Consensus 232 ~~~i~~-~~~~~~--~---~~~~----~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 232 IECITQ-GRVLQR--P---RTCP----KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHHHHc-CCcCCC--C---CCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 111211 111110 0 1111 23789999999999999999999999999987543
No 40
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-35 Score=310.96 Aligned_cols=242 Identities=21% Similarity=0.394 Sum_probs=189.6
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
..|..-..||+|+-|.||.|+ ..+++.||||++........+-+..|+.+|+..+|+|||+++..|...+ .
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d--------e 344 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD--------E 344 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc--------e
Confidence 345556789999999999997 5578999999998877777778899999999999999999999877653 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+|.|||||++|+|.+.+.+. .++..+...|+.++..||+|||.. +|+|||||++|||++.++.+||+|||++.
T Consensus 345 LWVVMEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 345 LWVVMEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred eEEEEeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 99999999999999988643 378899999999999999999998 89999999999999999999999999986
Q ss_pred ccccccccccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
..........+--...+| ..+..|.||||+|++.+||+-|.+||-.+... .. +.-+. .....++..+..
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-rA-lyLIa-~ng~P~lk~~~k 494 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RA-LYLIA-TNGTPKLKNPEK 494 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-HH-HHHHh-hcCCCCcCCccc
Confidence 554433221111122334 34567999999999999999999998753322 11 11111 122333333322
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. -..+.++..+|++.|+.+||++.|+++.
T Consensus 495 l-------S~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 495 L-------SPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred c-------CHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1 2347788999999999999999999875
No 41
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=316.40 Aligned_cols=240 Identities=23% Similarity=0.394 Sum_probs=185.2
Q ss_pred CcCCceecCCceeEEEEEecC----CceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 486 DMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.+.||+|.||+|++|.|.. ...||||++...... ...+|.+|+.+|-+|+|||+|+|||+..+.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q--------- 183 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ--------- 183 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc---------
Confidence 345789999999999999852 346999999876654 678999999999999999999999998863
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
.++||+|.++.|+|.+.|++ .....+-......++.|||.||+||.+. +.|||||.++|+||.....+||+||||.
T Consensus 184 p~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLm 259 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLM 259 (1039)
T ss_pred hhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccce
Confidence 57999999999999999987 3334466677788999999999999997 7899999999999999999999999998
Q ss_pred cccccc---cccccCCCCCCccc--------CCCCCCCEeehhHHHHHHhcC-CCccccCccchHHHHhhhhcccCcccc
Q 004232 641 IVSEDI---NSVGGKQEDPNSWE--------MTKLEDDVFSFGFMLLESVAG-PSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 641 ~~~~~~---~~~~~~~~~~~~~~--------~~~~~~DV~SfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
+..... +..+.....|..|. .++.++|||+|||++|||+|+ ..|+..... ...+..+. ...++
T Consensus 260 RaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~qIL~~iD---~~erL 334 (1039)
T KOG0199|consen 260 RALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--IQILKNID---AGERL 334 (1039)
T ss_pred eccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--HHHHHhcc---ccccC
Confidence 765432 21122223444453 455689999999999999995 667653221 12222221 22223
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
..| ..+.+.+.++++.||+.+|.+||+|..|.+.+
T Consensus 335 pRP-------k~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 335 PRP-------KYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCC-------CCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 222 23445689999999999999999999998554
No 42
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.7e-34 Score=312.47 Aligned_cols=252 Identities=22% Similarity=0.346 Sum_probs=187.0
Q ss_pred cCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|++++.++ +||||++++++|...+
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~-- 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG-- 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC--
Confidence 4688899999999999999963 235789999987543 23346678899999999 8999999999987654
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC---------------------------------------------------
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP--------------------------------------------------- 583 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------------------------------------- 583 (766)
..++++|||+++|+|.+++.....
T Consensus 85 -----~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
T cd05054 85 -----GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEED 159 (337)
T ss_pred -----CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccc
Confidence 368999999999999998854211
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccc-------
Q 004232 584 -------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV------- 649 (766)
Q Consensus 584 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~------- 649 (766)
...++|..+..++.+|+.||+|||+. +|+||||||+||++++++.+||+|||++.........
T Consensus 160 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~ 236 (337)
T cd05054 160 EEGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 236 (337)
T ss_pred hhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCC
Confidence 12578999999999999999999987 8999999999999999999999999999654221110
Q ss_pred ---ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHH
Q 004232 650 ---GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIV 725 (766)
Q Consensus 650 ---~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 725 (766)
.+..++......++.++|||||||++|||++ |..|+...... +............. .+ ......+
T Consensus 237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~--~~-------~~~~~~~ 305 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFCRRLKEGTRMR--AP-------EYATPEI 305 (337)
T ss_pred CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHHHHHhccCCCC--CC-------ccCCHHH
Confidence 0111111122445678999999999999998 99888632211 11111111111110 11 1112347
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 726 ISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 726 ~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.+++.+||+.+|++||++.||+++|+.+.+
T Consensus 306 ~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 306 YSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 889999999999999999999999998875
No 43
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.3e-34 Score=300.03 Aligned_cols=245 Identities=20% Similarity=0.397 Sum_probs=186.7
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~ 76 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEE--------PI 76 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC--------Cc
Confidence 56888899999999999999988888999999865432 3578899999999999999999999887653 57
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++++.. ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~ 152 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARV 152 (261)
T ss_pred EEEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCcccee
Confidence 99999999999999987543 23578999999999999999999987 899999999999999999999999999976
Q ss_pred cccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........ ...++.......+.++|||||||++|||+| |+.|+...... .....+.. .... +.
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~-~~~~----~~ 225 (261)
T cd05072 153 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQR-GYRM----PR 225 (261)
T ss_pred cCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHc-CCCC----CC
Confidence 53321110 011111112334567899999999999999 88888643221 11111111 1000 10
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
.... ...+.+++.+||..+|++||++++|.+.|++
T Consensus 226 -~~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 -MENC----PDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -CCCC----CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111 1236789999999999999999999999875
No 44
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.2e-34 Score=304.07 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=185.5
Q ss_pred CCcCCceecCCceeEEEEEe-----cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|+..+.||+|+||+||++.+ .++..||+|.++... ....+.+.+|++++++++||||++++++|.....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 80 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG----- 80 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC-----
Confidence 37788999999999988653 357889999987543 2345678899999999999999999999876431
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...++||||+++|+|.+++.+. .+++..+..++.+++.|++|||+. +|+||||||+||++++++.+||+|||
T Consensus 81 -~~~~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 81 -KGLQLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred -ceEEEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecc
Confidence 3579999999999999998753 389999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc------c-----cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc---cC
Q 004232 639 LSIVSEDINSV------G-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ---EG 704 (766)
Q Consensus 639 la~~~~~~~~~------~-----~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~---~~ 704 (766)
+++........ . ...++.......+.++|||||||++|||+||..|+........+........ ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 153 LAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 98654321110 0 0011111113346689999999999999999988753221111111000000 00
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
..+..+.......+......+.+++.+||+.+|++||+|++|+++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 01111111111111112245788999999999999999999999999864
No 45
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.7e-35 Score=320.07 Aligned_cols=252 Identities=22% Similarity=0.337 Sum_probs=185.8
Q ss_pred HhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCC-CCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~ 552 (766)
..+.|.+.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|++++++++ |||||+++|+|.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3567888899999999999999842 23479999997543 334567899999999996 999999999997653
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------------------------------------------
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTP------------------------------------------------- 583 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------------------- 583 (766)
..++||||+++|+|.+++++...
T Consensus 115 --------~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 115 --------PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred --------ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 68999999999999998864310
Q ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 004232 584 --------------------------------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV 619 (766)
Q Consensus 584 --------------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl 619 (766)
...+++..+..++.|+++||+|||+. +|+||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~di 263 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDL 263 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCC
Confidence 12478888899999999999999997 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCccccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccC
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARK 688 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~ 688 (766)
||+||++++++.+||+|||+++........ . +..++......++.++|||||||++|||++ |..|+...
T Consensus 264 kp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 264 AARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred ChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 999999999999999999998654221110 0 011111112345678999999999999997 88887632
Q ss_pred ccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 689 GQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
... ......+. ...... .+ . .....+.+++.+||+.||++||+|.+|.++|+...
T Consensus 344 ~~~-~~~~~~~~-~~~~~~--~~---~----~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 344 IVD-STFYNKIK-SGYRMA--KP---D----HATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred chh-HHHHHHHh-cCCCCC--CC---c----cCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111 01111111 111100 01 1 11234778999999999999999999999998754
No 46
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.7e-34 Score=300.94 Aligned_cols=249 Identities=24% Similarity=0.431 Sum_probs=192.2
Q ss_pred HHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++..+|++.+.||+|+||.||+|...++..||+|.+..........+..|+.++++++||||+++++++.+.+
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------- 75 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE------- 75 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-------
Confidence 3456788899999999999999998889999999998766656678999999999999999999999987653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.+.. ...+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||+
T Consensus 76 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 76 -PVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred -CeEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 6899999999999999997643 34589999999999999999999987 899999999999999999999999999
Q ss_pred CcccccccccccC--------CCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccc
Q 004232 640 SIVSEDINSVGGK--------QEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 640 a~~~~~~~~~~~~--------~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+............ .++......++.++|||||||++|||++ |+.|+..... ...+..+.. .... ..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~-~~~~--~~ 225 (261)
T cd05148 151 ARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQITA-GYRM--PC 225 (261)
T ss_pred hhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHHh-CCcC--CC
Confidence 8654322111111 1111112345568999999999999998 7888864321 111111111 1011 11
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
+ . .....+.+++.+||+.||++|||++++.+.|+.
T Consensus 226 ~---~----~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 P---A----KCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred C---C----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 1 1 112346789999999999999999999999975
No 47
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6.1e-34 Score=297.71 Aligned_cols=246 Identities=22% Similarity=0.427 Sum_probs=186.5
Q ss_pred cCCCcCCceecCCceeEEEEEec----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|++. +...||||.++... .....++.+|+.++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR----- 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC-----
Confidence 56888999999999999999864 24579999987543 334567899999999999999999999887653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.... ..+++..+..++.+++.|++|||+. +|+||||||+||++++++.+|++||
T Consensus 79 ---~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 79 ---PVMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred ---ceEEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECcc
Confidence 6899999999999999987643 2588999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc----cc------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcc
Q 004232 638 GLSIVSEDINS----VG------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 638 Gla~~~~~~~~----~~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|++........ .. +..++......++.++||||||+++|||++ |..|+..... ......+.. ....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~-~~~~ 227 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QDVIKAVED-GYRL 227 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HHHHHHHHc-CCCC
Confidence 99876531110 00 011111112345668999999999999998 9888753221 111111111 1000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
. .+ . .....+.+++.+||+.+|++||+++||++.|+++
T Consensus 228 ~--~~---~----~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 228 P--PP---M----DCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred C--CC---C----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 01 1 1123467999999999999999999999999875
No 48
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-34 Score=305.44 Aligned_cols=260 Identities=19% Similarity=0.329 Sum_probs=186.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-----CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-----NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.+|++.+.||+|+||.||+|..+ ++..||+|++........+.+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---- 79 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 79 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC----
Confidence 45777899999999999999753 578999999987666667789999999999999999999998865431
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++|+||+++|+|.+++.+.. ..++|..+..++.+++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 80 --~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 80 --RNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred --CceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 35799999999999999987542 2488999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc---cc--------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc-ccC-
Q 004232 638 GLSIVSEDINSV---GG--------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS-QEG- 704 (766)
Q Consensus 638 Gla~~~~~~~~~---~~--------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~-~~~- 704 (766)
|++......... .. ..++......++.++|||||||++|||++|..++................ ...
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd05081 153 GLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIV 232 (284)
T ss_pred cccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccch
Confidence 998754321110 00 00111111234567899999999999999876643211111000000000 000
Q ss_pred --ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 705 --RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 705 --~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
..+.................+.+++.+||+.+|++||||.||++.|+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 233 YHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0000000000000011123478899999999999999999999999875
No 49
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.2e-34 Score=303.43 Aligned_cols=254 Identities=24% Similarity=0.433 Sum_probs=188.1
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCc--eEEEEEccCC-hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGT--SVAIRCLPSS-KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~-~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|... ++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG----- 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-----
Confidence 46888899999999999999864 333 4788888743 334456789999999999 7999999999987653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
..++|+||+++|+|.+++++... ...+++.....++.|++.|++|||+. +|+||||||+||
T Consensus 77 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Ni 150 (297)
T cd05089 77 ---YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNV 150 (297)
T ss_pred ---cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceE
Confidence 58999999999999999875321 12478899999999999999999987 899999999999
Q ss_pred EEcCCCcEEEecCCCCcccccccc--cc-----cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 625 LLNEHRIAKLSDYGLSIVSEDINS--VG-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 625 Lld~~~~~kl~DFGla~~~~~~~~--~~-----~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
++++++.+||+|||++........ .. ...++......++.++|||||||++|||+| |..||..... ....
T Consensus 151 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--~~~~ 228 (297)
T cd05089 151 LVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--AELY 228 (297)
T ss_pred EECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHH
Confidence 999999999999999854321100 00 111111122345678999999999999998 9888864322 1111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
..... ...... + ... ...+.+++.+||+.+|.+||++++|+++|+.+.+...+
T Consensus 229 ~~~~~-~~~~~~--~---~~~----~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 229 EKLPQ-GYRMEK--P---RNC----DDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HHHhc-CCCCCC--C---CCC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 11111 100000 0 111 12367899999999999999999999999988875543
No 50
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-34 Score=303.02 Aligned_cols=243 Identities=17% Similarity=0.228 Sum_probs=180.1
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|+..+.||+|+||.||+|.. .+|+.||||.+.... ......+.+|++++++++|+||+++++++.+.+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-------- 73 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-------- 73 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC--------
Confidence 66778999999999999985 579999999986533 222346788999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|..++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 74 ~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 74 ALCLVLTIMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred eEEEEEEecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 6899999999999998876432 23488999999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~ 712 (766)
......... + +..++......++.++|||||||++|||++|+.||...... ....+...... ....+
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~---- 224 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEY---- 224 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccC----
Confidence 654321111 1 11111122234567899999999999999999998743221 11111111110 00111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPS-----FEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~~ 749 (766)
....+ ..+.+|+.+||+.||.+||+ ++++++.
T Consensus 225 -~~~~s----~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 225 -SEKFS----EDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -CccCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 11111 23678999999999999997 7777653
No 51
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.4e-34 Score=303.89 Aligned_cols=250 Identities=23% Similarity=0.381 Sum_probs=189.6
Q ss_pred cCCCcCCceecCCceeEEEEEec------CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|.+.+.||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++||||+++++++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD---- 80 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC----
Confidence 35777889999999999999742 35679999987766666678999999999999999999999987653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~N 623 (766)
..++||||+++|+|.+++....+ ...++|..++.++.+++.|++|||++ +|+||||||+|
T Consensus 81 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 153 (291)
T cd05094 81 ----PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRN 153 (291)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcce
Confidence 68999999999999999875431 13478999999999999999999987 89999999999
Q ss_pred eEEcCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccch
Q 004232 624 ILLNEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFL 692 (766)
Q Consensus 624 ILld~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~ 692 (766)
|+++.++.+||+|||++........ .. ...++......++.++|||||||++|||+| |+.|+......
T Consensus 154 il~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~- 232 (291)
T cd05094 154 CLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT- 232 (291)
T ss_pred EEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999864322110 00 111111112345668999999999999999 99987543221
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..+..+. .....+. + . .....+.+++.+||+.+|.+||++++|+++|+++..
T Consensus 233 -~~~~~~~-~~~~~~~--~---~----~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 233 -EVIECIT-QGRVLER--P---R----VCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred -HHHHHHh-CCCCCCC--C---c----cCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 1111111 1111111 0 0 112347799999999999999999999999999854
No 52
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=324.07 Aligned_cols=259 Identities=16% Similarity=0.246 Sum_probs=197.8
Q ss_pred hcCCCcCCceecCCceeEEEEEecCC-ceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccc-eeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENG-TSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLG-HCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g-~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g-~~~~~~~~~~~~ 558 (766)
..++.+.+.|.+|||+.||.|+...+ ..+|+|++-..++...+.+.+||++|++|+ |||||.+++ ......+.. .
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~--~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN--G 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC--c
Confidence 34466788999999999999997655 999999998878888999999999999997 999999998 333322211 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.-+++|.||||++|.|-+++.++.... |+..+.++|+.++++|+++||.. .|+|||||||.+||||+.+++.||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 136899999999999999998654433 89999999999999999999985 5689999999999999999999999999
Q ss_pred CCccccccc-----------------ccccCCCC---CCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhh
Q 004232 639 LSIVSEDIN-----------------SVGGKQED---PNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDS 698 (766)
Q Consensus 639 la~~~~~~~-----------------~~~~~~~~---~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~ 698 (766)
-+.-..... +..++.++ .+.....++|+||||+||+||-|+....||+..+...+
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI----- 266 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI----- 266 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE-----
Confidence 873211000 00111111 11224567899999999999999999999985433110
Q ss_pred hhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 699 LNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 699 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
......+.+ .......+.+|+..|++.||.+||++-||+..+.+++..+..
T Consensus 267 ---lng~Y~~P~-------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~ 317 (738)
T KOG1989|consen 267 ---LNGNYSFPP-------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP 317 (738)
T ss_pred ---EeccccCCC-------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence 011222222 112334578999999999999999999999999998875543
No 53
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.3e-34 Score=301.16 Aligned_cols=247 Identities=21% Similarity=0.327 Sum_probs=182.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCc----eEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGT----SVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|+..+.||+|+||+||+|++. ++. .||+|.+.... ....+++..|+..+++++||||++++|++...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~----- 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA----- 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC-----
Confidence 45777899999999999999863 344 47888875432 23456788888899999999999999987542
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++++||+++|+|.+++.... ..++|.....++.||+.||+|||+. +++||||||+||++++++.+||+|
T Consensus 82 ----~~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 82 ----SLQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred ----ccEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 4689999999999999997543 3489999999999999999999987 899999999999999999999999
Q ss_pred CCCCccccccccc--c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV--G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~--~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ . ...++......++.++|||||||++||++| |+.|+........ ..+.....
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~---~~~~~~~~- 228 (279)
T cd05111 153 FGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV---PDLLEKGE- 228 (279)
T ss_pred CccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCCC-
Confidence 9999654221110 0 001111112345678999999999999998 9988864322111 11111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
....+.. . ...+.+++.+||..+|.+||++.|+++.|+.+..
T Consensus 229 -~~~~~~~---~----~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 229 -RLAQPQI---C----TIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -cCCCCCC---C----CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 1111111 1 1235678899999999999999999999988753
No 54
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4.2e-34 Score=298.05 Aligned_cols=246 Identities=23% Similarity=0.449 Sum_probs=188.8
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|...+++.||+|.++... ...+++.+|++++++++||||+++++++...+ .
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE--------P 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC--------C
Confidence 45688889999999999999998778899999987543 23567889999999999999999999887653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... ...++|..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||+++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred eeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 799999999999999987643 34589999999999999999999987 89999999999999999999999999986
Q ss_pred cccccccc---c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSV---G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~---~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
........ + ...++.......+.++|||||||++|||+| |+.|+..... ......+.... ....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~---~~~~~ 226 (261)
T cd05068 152 VIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQVDQGY---RMPCP 226 (261)
T ss_pred EccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCC---CCCCC
Confidence 54322111 0 111111122345668999999999999999 8888864321 11111111110 00001
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
. .....+.+++.+|++.+|.+||+|.++.+.|++
T Consensus 227 ---~----~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 227 ---P----GCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---C----cCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0 112347789999999999999999999999985
No 55
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.8e-34 Score=304.59 Aligned_cols=259 Identities=26% Similarity=0.450 Sum_probs=190.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCc--eEEEEEccCC-hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGT--SVAIRCLPSS-KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~-~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+|+||.||+|+.. ++. .+|+|.++.. .....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~---- 81 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG---- 81 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC----
Confidence 357888899999999999999864 454 4688877643 234456788999999999 8999999999987653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~N 623 (766)
..++||||+++|+|.+++++... ...+++..++.++.|++.|++|||+. +++||||||+|
T Consensus 82 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~N 154 (303)
T cd05088 82 ----YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARN 154 (303)
T ss_pred ----CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---Cccccccchhe
Confidence 68999999999999999875421 12478999999999999999999987 89999999999
Q ss_pred eEEcCCCcEEEecCCCCccccccccc--c-----cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHH
Q 004232 624 ILLNEHRIAKLSDYGLSIVSEDINSV--G-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEE 695 (766)
Q Consensus 624 ILld~~~~~kl~DFGla~~~~~~~~~--~-----~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~ 695 (766)
||+++++.+||+|||++......... . ...++.......+.++|||||||++|||+| |..|+..... .+.
T Consensus 155 ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~ 232 (303)
T cd05088 155 ILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AEL 232 (303)
T ss_pred EEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--HHH
Confidence 99999999999999998543211110 0 011111112335678999999999999998 8888853221 111
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccccccc
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQETADNE 763 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~~~~~ 763 (766)
...+.. ..... .+ .. ....+.+++.+||+.+|++||++.+++++|+.+...+....+.
T Consensus 233 ~~~~~~-~~~~~--~~---~~----~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~~~~ 290 (303)
T cd05088 233 YEKLPQ-GYRLE--KP---LN----CDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNT 290 (303)
T ss_pred HHHHhc-CCcCC--CC---CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhhhhh
Confidence 111111 00000 00 01 1123678999999999999999999999999887766554443
No 56
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.1e-34 Score=298.54 Aligned_cols=246 Identities=23% Similarity=0.410 Sum_probs=186.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.+|++.+.||+|+||.||+|... .++.||+|.++... ...+++.+|++++++++||||++++++|...+ .
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 76 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP--------P 76 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC--------C
Confidence 34777889999999999999864 58899999987543 34567889999999999999999999987653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 77 FYIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred cEEEEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 799999999999999987543 23588999999999999999999987 89999999999999999999999999986
Q ss_pred ccccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
......... ...++......++.++|||||||++|||+| |..|+.... ..+.+..+.. ..... .+
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~~~~~~-~~~~~--~~ 227 (263)
T cd05052 153 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEK-GYRME--RP 227 (263)
T ss_pred ccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHC-CCCCC--CC
Confidence 543321110 011111122345568999999999999998 888876322 1222222211 10111 11
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
... ...+.+++.+||+.+|++||+|.|++++|+.+
T Consensus 228 ---~~~----~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 228 ---EGC----PPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCC----CHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111 13477899999999999999999999999864
No 57
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=299.41 Aligned_cols=247 Identities=23% Similarity=0.361 Sum_probs=186.1
Q ss_pred HHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh--------------hhHHHHHHHHHHHHhCCCCCcccc
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--------------YTVRNLKLRLDLLAKLRHPHLVCL 544 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--------------~~~~~~~~e~~~l~~l~Hpniv~l 544 (766)
+..++|++...||+|.||+|-+|+- .+++.||||++.+... ...+.+.+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 4568899999999999999999984 4799999999975421 123578999999999999999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCc
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKV-LNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~N 623 (766)
+.+.-++. .+.+|||+|||..|.+... ...++ ++..+...|..++..||+|||.+ +||||||||+|
T Consensus 174 iEvLDDP~------s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsN 240 (576)
T KOG0585|consen 174 IEVLDDPE------SDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSN 240 (576)
T ss_pred EEeecCcc------cCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhh
Confidence 99876654 3579999999999988642 22334 88999999999999999999998 89999999999
Q ss_pred eEEcCCCcEEEecCCCCcccccccc------cccCCCCCCcc-----------cCCCCCCCEeehhHHHHHHhcCCCccc
Q 004232 624 ILLNEHRIAKLSDYGLSIVSEDINS------VGGKQEDPNSW-----------EMTKLEDDVFSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 624 ILld~~~~~kl~DFGla~~~~~~~~------~~~~~~~~~~~-----------~~~~~~~DV~SfGvil~ElltG~~p~~ 686 (766)
+||+++|++||+|||++........ ...+.++|+.. ...+.+.||||+||+||-++.|+.||.
T Consensus 241 LLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 241 LLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFF 320 (576)
T ss_pred eEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcc
Confidence 9999999999999999865421100 00111222211 112335699999999999999999986
Q ss_pred cCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 687 RKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
+....+.+.++.... +.-| ...+....+.+|+++.+++||.+|-+..+|....
T Consensus 321 --~~~~~~l~~KIvn~p----L~fP-----~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 321 --DDFELELFDKIVNDP----LEFP-----ENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHP 373 (576)
T ss_pred --cchHHHHHHHHhcCc----ccCC-----CcccccHHHHHHHHHHhhcChhheeehhhheecc
Confidence 334444445444322 1111 1112334577899999999999999999887654
No 58
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.2e-34 Score=299.41 Aligned_cols=243 Identities=22% Similarity=0.373 Sum_probs=183.7
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+|.+.+.||+|+||.||+|+..++..||||.+.... ....++.+|+.++++++||||++++|+|.+.+ ..
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~ 74 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR--------PI 74 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC--------Cc
Confidence 3567788999999999999998777789999987543 23467899999999999999999999987653 57
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++..... .++|..+..++.+|+.|++|||+. +++||||||+||++++++.+||+|||.++.
T Consensus 75 ~lv~e~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~ 149 (256)
T cd05113 75 YIVTEYMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRY 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCcccee
Confidence 999999999999999875432 488999999999999999999987 899999999999999999999999999865
Q ss_pred ccccccc---c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSV---G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~---~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
....... . ...++......++.++|||||||++|||+| |+.|+...... .....+.. .... ..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~-~~~~--~~~~ 224 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQ-GLRL--YRPH 224 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhc-CCCC--CCCC
Confidence 4321111 0 011111111345668999999999999999 88887643221 11111111 1111 0111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.. ...+.+++.+||+.+|.+||++.+|++.|+
T Consensus 225 ---~~----~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 ---LA----SEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ---CC----CHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11 134778999999999999999999998764
No 59
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.6e-34 Score=308.57 Aligned_cols=192 Identities=20% Similarity=0.266 Sum_probs=156.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+++.. +|..||+|.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 76 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------- 76 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC--------
Confidence 67888999999999999999865 68899999987542 334567999999999999999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||.|||+.. +|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 151 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccc
Confidence 6899999999999999987643 3788889999999999999999852 5999999999999999999999999998
Q ss_pred ccccccccc------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 641 IVSEDINSV------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 641 ~~~~~~~~~------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
......... .+..++......++.++|||||||++|||+||+.||..
T Consensus 152 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 152 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 654321111 11111111223456789999999999999999999864
No 60
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.9e-34 Score=301.36 Aligned_cols=246 Identities=24% Similarity=0.389 Sum_probs=182.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-----cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|++.+.||+|+||+||+|+. ..+..||+|.+.... ......+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 80 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ---- 80 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC----
Confidence 4577889999999999999984 356789999997533 344577899999999999999999999987653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCC
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP--------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTN 622 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~ 622 (766)
..++||||+++|+|.+++..... ...+++...+.++.+++.||+|||+. +++||||||+
T Consensus 81 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~ 153 (283)
T cd05090 81 ----PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAAR 153 (283)
T ss_pred ----ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---Ceehhccccc
Confidence 67999999999999998853321 12478888999999999999999997 8999999999
Q ss_pred ceEEcCCCcEEEecCCCCccccccccc----------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccc
Q 004232 623 NILLNEHRIAKLSDYGLSIVSEDINSV----------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQF 691 (766)
Q Consensus 623 NILld~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~ 691 (766)
||++++++.+|++|||+++........ .+..++......++.++|||||||++|||++ |..|+......
T Consensus 154 nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~ 233 (283)
T cd05090 154 NILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ 233 (283)
T ss_pred eEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999999998654221100 0111111112345668999999999999999 88887532221
Q ss_pred hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 692 LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
. +........... ..... ...+.+++.+||+.||++||++.+|.++|.
T Consensus 234 --~-~~~~~~~~~~~~-----~~~~~----~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 234 --E-VIEMVRKRQLLP-----CSEDC----PPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred --H-HHHHHHcCCcCC-----CCCCC----CHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 1 111111111111 00111 134678899999999999999999998875
No 61
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=7.7e-34 Score=297.83 Aligned_cols=251 Identities=20% Similarity=0.371 Sum_probs=181.9
Q ss_pred CcCCceecCCceeEEEEEecC-Cc--eEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 486 DMSAIMGEGSYGKLYKGRLEN-GT--SVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~~-g~--~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.+.||+|+||.||+|+... +. .||+|.++.. .....+.+.+|++++++++||||++++|+|....... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESE--GYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCccc--CCC
Confidence 456889999999999998754 32 5899988653 3444678899999999999999999999986543111 113
Q ss_pred eEEEEEEccCCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 561 KVFLVYEFMSNGNFRTHISENT---PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..+++|||+++|+|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 5799999999999998874321 123478999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc--cccC---C-----CCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcc
Q 004232 638 GLSIVSEDINS--VGGK---Q-----EDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 638 Gla~~~~~~~~--~~~~---~-----~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|+++....... .... . ++......++.++|||||||++|||++ |+.|+..... ......+.. ....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~-~~~~ 233 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLRQ-GNRL 233 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc-CCCC
Confidence 99875432111 0000 0 000111234567999999999999999 7888753221 122222211 1111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
. .+ .. ....+.+++.+||+.||++|||+.+|++.|+++
T Consensus 234 ~--~~---~~----~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 234 K--QP---PD----CLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred C--CC---CC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 11 11 122367899999999999999999999999875
No 62
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.5e-34 Score=309.00 Aligned_cols=248 Identities=24% Similarity=0.317 Sum_probs=184.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~------ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE------ 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC------
Confidence 36888999999999999999965 58999999987542 233567888999999999999999999987753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 75 --~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 75 --YLYLAMEYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred --EEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 7899999999999999997543 478888999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc--c---ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 639 LSIVSEDINS--V---GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 639 la~~~~~~~~--~---~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
++........ . .+..++......++.++|||||||++|||++|+.||..... .+.+..+.... ..+..|..
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~--~~~~~~~~ 222 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--NETWENLKYWK--ETLQRPVY 222 (333)
T ss_pred CCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--HHHHHHHHhcc--ccccCCCC
Confidence 9865433111 1 11112212223456789999999999999999999864322 11111111100 00111111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ........+.+++.+|+..+|.+||+++|+++.
T Consensus 223 ~~-~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 223 DD-PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred Cc-cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 00 000112346788999999999999999999865
No 63
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=282.73 Aligned_cols=194 Identities=20% Similarity=0.322 Sum_probs=162.5
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|+..+.||.|+||.|..++.+ +|...|+|.++..+. ...+....|..+|+.+.||++|++.+-|.+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~----- 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS----- 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC-----
Confidence 356788899999999999999854 688999999987643 34566788999999999999999999988864
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.++|||||+++|.|..++++.++ ++......+|.+|+.|++|||+. .|++|||||+|||||.+|++||+||
T Consensus 118 ---~lymvmeyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 ---NLYMVMEYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred ---eEEEEEeccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 79999999999999999987543 78888889999999999999998 8999999999999999999999999
Q ss_pred CCCcccccccc-cccCCCC----CCcccCCCCCCCEeehhHHHHHHhcCCCccccCc
Q 004232 638 GLSIVSEDINS-VGGKQED----PNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKG 689 (766)
Q Consensus 638 Gla~~~~~~~~-~~~~~~~----~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~ 689 (766)
|+|+....... ..+++++ ......+...+|+|||||++|||+.|.+||....
T Consensus 189 GFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~ 245 (355)
T KOG0616|consen 189 GFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN 245 (355)
T ss_pred cceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence 99987655432 2233322 1223455667899999999999999999987544
No 64
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1e-33 Score=296.85 Aligned_cols=252 Identities=19% Similarity=0.352 Sum_probs=184.8
Q ss_pred CCcCCceecCCceeEEEEEecC----CceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|++.+.||+|+||.||+|.... +..||||.++... ......+.+|++.+++++||||++++|++.+.... ..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSL--QK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCcc--cc
Confidence 4667899999999999998642 4679999987542 33456789999999999999999999998765321 01
Q ss_pred cceEEEEEEccCCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENT---PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
....++++||+++|+|..++.... ....+++.....++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVA 155 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEEC
Confidence 134799999999999999885432 223588999999999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccccc--cc--------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccC
Q 004232 636 DYGLSIVSEDINSV--GG--------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 636 DFGla~~~~~~~~~--~~--------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
|||+++........ .. ..++.......+.++|||||||++|||++ |..|+..... .+....+.. ..
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~~~-~~ 232 (273)
T cd05035 156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYLRH-GN 232 (273)
T ss_pred CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc-CC
Confidence 99998654321110 00 01111112345668999999999999999 8888753221 121222211 11
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
..... . .....+.+++.+||+.||++||++.||++.|++.
T Consensus 233 ~~~~~-----~----~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 RLKQP-----E----DCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCC-----c----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 1 1223478899999999999999999999999874
No 65
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=7.6e-34 Score=301.45 Aligned_cols=251 Identities=21% Similarity=0.400 Sum_probs=187.6
Q ss_pred HhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
..++|++.+.||+|+||.||+|... ....+|+|.+.... .....++.+|+++++++ +||||++++++|.+.+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3456888899999999999999853 23679999987542 33456788999999999 8999999999987653
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV 619 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl 619 (766)
..+++|||+++|+|..+++... ....+++..++.++.|++.|++|||+. +|+||||
T Consensus 90 --------~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dl 158 (293)
T cd05053 90 --------PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDL 158 (293)
T ss_pred --------CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence 6899999999999999986531 234588999999999999999999986 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCccccccccc--c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccC
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVSEDINSV--G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARK 688 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~~~~~~~--~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~ 688 (766)
||+||++++++.+|++|||+++........ . +..++.......+.++|||||||++||+++ |..|+...
T Consensus 159 kp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 238 (293)
T cd05053 159 AARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238 (293)
T ss_pred ceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence 999999999999999999998754322110 0 011111112345668999999999999998 88887633
Q ss_pred ccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 689 GQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.. ......+.. ...... + ......+.+++.+||..+|.+|||+.||++.|+.+.
T Consensus 239 ~~--~~~~~~~~~-~~~~~~--~-------~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 239 PV--EELFKLLKE-GYRMEK--P-------QNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CH--HHHHHHHHc-CCcCCC--C-------CCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 21 111111111 100000 0 111234778999999999999999999999999864
No 66
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-34 Score=292.73 Aligned_cols=261 Identities=18% Similarity=0.288 Sum_probs=186.5
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHh--CCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~--l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..+..+.+.||+|.||.||+|+|+ |+.||||++...+ .+.+.+|.+|... +||+||..+++.-..+. -..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~----gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDN----GSW 281 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCC----Cce
Confidence 356778899999999999999997 8899999997543 3567788887775 49999999998754432 234
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcccCCCCCCceEEcCCCcEEE
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG-----VIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
.++|||+||.++|+|++||.+. .++-...++++..+|.||+|||.. ..|.|.|||||+.|||+..++.+.|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 6899999999999999999863 488899999999999999999963 4589999999999999999999999
Q ss_pred ecCCCCccccccc---------ccccCCCCCCcccC--------CC-CCCCEeehhHHHHHHhcC----------CCccc
Q 004232 635 SDYGLSIVSEDIN---------SVGGKQEDPNSWEM--------TK-LEDDVFSFGFMLLESVAG----------PSVAA 686 (766)
Q Consensus 635 ~DFGla~~~~~~~---------~~~~~~~~~~~~~~--------~~-~~~DV~SfGvil~ElltG----------~~p~~ 686 (766)
+|+|||....... ..+++...++..-- .+ ..+||||||.|+||++.. +.||.
T Consensus 358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy 437 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY 437 (513)
T ss_pred eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence 9999995432221 11221111100000 00 136999999999998842 23332
Q ss_pred cC--ccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 687 RK--GQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 687 ~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
.- .+-..++...+.-.......++.. -.+.+++..+.++++.||..+|..|-|+--|-+.|.++.+.+
T Consensus 438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnr---W~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ 507 (513)
T KOG2052|consen 438 DVVPSDPSFEEMRKVVCVQKLRPNIPNR---WKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD 507 (513)
T ss_pred cCCCCCCCHHHHhcceeecccCCCCCcc---cccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence 10 011112222222111111111111 123467888999999999999999999999999999887543
No 67
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4e-34 Score=311.95 Aligned_cols=238 Identities=19% Similarity=0.282 Sum_probs=174.4
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+|+..+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|++++++++|+||+++++++.+.+ .
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~ 146 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG--------E 146 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC--------e
Confidence 4556688999999999999854 68999999986543 334567899999999999999999999987653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.... ...+.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++
T Consensus 147 ~~lv~e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~ 216 (353)
T PLN00034 147 IQVLLEFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSR 216 (353)
T ss_pred EEEEEecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccce
Confidence 89999999999986532 245667788999999999999997 89999999999999999999999999986
Q ss_pred ccccccc-----cccCC-CCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCcc-chHHHHhhhhcccCccc
Q 004232 642 VSEDINS-----VGGKQ-EDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQ-FLQEELDSLNSQEGRQR 707 (766)
Q Consensus 642 ~~~~~~~-----~~~~~-~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~ 707 (766)
....... .+... ..|... ...+.++|||||||++|||++|+.||..... ........+.... .
T Consensus 217 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~-- 293 (353)
T PLN00034 217 ILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ-P-- 293 (353)
T ss_pred ecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-C--
Confidence 5432211 11100 011111 1223578999999999999999999863221 1111111111000 0
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+..... ....+.+++.+||+.||++||++.||++.
T Consensus 294 ---~~~~~~----~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 294 ---PEAPAT----ASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ---CCCCCc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000011 12347789999999999999999999875
No 68
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.2e-34 Score=305.26 Aligned_cols=240 Identities=15% Similarity=0.234 Sum_probs=181.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR------ 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC------
Confidence 36888899999999999999864 68999999986432 233566889999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 75 --~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 75 --FLYMLMEYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred --eEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 7899999999999999987643 478888999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc--cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 639 LSIVSEDINSV--GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 639 la~~~~~~~~~--~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
+++........ +. ..++.......+.++|||||||++|||+||+.|+..... ......+... ..++ +
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--~~~~~~i~~~--~~~~--~-- 218 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--FGIYEKILAG--KLEF--P-- 218 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC--CcCC--C--
Confidence 98654332111 11 111111223356789999999999999999999864322 1111221111 0111 1
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPS-----FEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~~ 749 (766)
... -..+.+++.+|++.||.+||+ +.|+++.
T Consensus 219 -~~~----~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 219 -RHL----DLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -ccC----CHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111 123678999999999999995 7777654
No 69
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-33 Score=295.68 Aligned_cols=251 Identities=17% Similarity=0.272 Sum_probs=188.2
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+. .+++.||||.++.. .....+.+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN------ 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC------
Confidence 5788899999999999999985 47899999987542 2344567889999999999999999999988653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTP-GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++|+||+++|+|.+++..... ...++......++.+++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 76 --~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~ 150 (267)
T cd08228 76 --ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred --eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECcc
Confidence 68999999999999988854321 23478888899999999999999987 8999999999999999999999999
Q ss_pred CCCccccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++......... + ...++.......+.++|||||||++|||+||+.|+.............+.. ..
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~-~~----- 224 (267)
T cd08228 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQ-CD----- 224 (267)
T ss_pred ccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhc-CC-----
Confidence 998654322110 0 011111111234567899999999999999999986433222222222111 00
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.+.. ........+.+++.+||+.+|++||++.+|++.++.+
T Consensus 225 ~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 225 YPPL---PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCC---ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1111 1111224478899999999999999999999999875
No 70
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.4e-34 Score=294.51 Aligned_cols=238 Identities=24% Similarity=0.414 Sum_probs=178.5
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
+.||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++||||++++++|.+.. ..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~ 72 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ--------PIYIVM 72 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC--------CeEEEE
Confidence 3689999999999986 478999999876432 334567899999999999999999999987653 679999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 73 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 73 ELVQGGDFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred eeccCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 9999999999987543 3478999999999999999999987 8999999999999999999999999998653321
Q ss_pred cccc----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 647 NSVG----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 647 ~~~~----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
.... +..++.......+.++|||||||++|||++ |..|+...... .....+. ....... + .
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~-~~~~~~~--~---~ 219 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIE-QGVRLPC--P---E 219 (252)
T ss_pred cccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHH-cCCCCCC--c---c
Confidence 1100 011111112334567899999999999998 88887532211 1111111 1100010 1 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.....+.+++.+|++.+|++||++.||.++|+
T Consensus 220 ----~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 220 ----LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 11234778999999999999999999999986
No 71
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.8e-34 Score=300.13 Aligned_cols=247 Identities=26% Similarity=0.447 Sum_probs=185.0
Q ss_pred cCCCcCCceecCCceeEEEEEecC------CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN------GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
++|++.+.||+|+||.||+|.... ...||+|.++... ....+++.+|+.++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ--- 81 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC---
Confidence 467888999999999999998532 2579999987543 334567899999999999999999999987653
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCC
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPG-------------KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTN 622 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~ 622 (766)
..+++|||+++|+|.+++...... ..+++.....++.+++.||+|||+. +++||||||+
T Consensus 82 -----~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~ 153 (283)
T cd05048 82 -----PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAAR 153 (283)
T ss_pred -----ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccccc
Confidence 679999999999999998754221 3478889999999999999999997 8999999999
Q ss_pred ceEEcCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccc
Q 004232 623 NILLNEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQF 691 (766)
Q Consensus 623 NILld~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~ 691 (766)
||++++++.+||+|||+++....... .. +.+++.......+.++|||||||++|||+| |..|+.....
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~- 232 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN- 232 (283)
T ss_pred eEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 99999999999999999865322110 00 111111112345668999999999999998 9888763221
Q ss_pred hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 692 LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
.+....+. ....... +......+.+|+.+||+.||.+||+++||++.|+.
T Consensus 233 -~~~~~~i~-~~~~~~~---------~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 -QEVIEMIR-SRQLLPC---------PEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -HHHHHHHH-cCCcCCC---------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11111111 1111111 11122447889999999999999999999999975
No 72
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=7.8e-34 Score=299.26 Aligned_cols=252 Identities=21% Similarity=0.348 Sum_probs=190.2
Q ss_pred hcCCCcCCceecCCceeEEEEEecC-----CceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN-----GTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
.++|.+.++||+|+||.||+|.... +..||+|.+... .....+.+.+|+.++++++||||++++|++.+.+
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~--- 81 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG--- 81 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC---
Confidence 4568888999999999999999755 788999988754 3344677889999999999999999999987643
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPG-----KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
...++++||+++|+|..++...... ..+++..+..++.+++.||+|||+. +++||||||+||++++++
T Consensus 82 ----~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 82 ----EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEEL 154 (280)
T ss_pred ----CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCC
Confidence 2579999999999999998754322 4588999999999999999999987 899999999999999999
Q ss_pred cEEEecCCCCccccccccc----------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhh
Q 004232 631 IAKLSDYGLSIVSEDINSV----------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSL 699 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~----------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~ 699 (766)
.+||+|||+++........ ....++......++.++|||||||++||+++ |+.|+..... ......+
T Consensus 155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~ 232 (280)
T cd05043 155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYL 232 (280)
T ss_pred cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHH
Confidence 9999999999653221100 0111111112345678999999999999999 9999864322 1111111
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.. + .....+ ... ...+.+++.+||+.||++||++.||++.|+.+.+
T Consensus 233 ~~-~--~~~~~~---~~~----~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 KD-G--YRLAQP---INC----PDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred Hc-C--CCCCCC---CcC----CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11 1 111111 111 1246789999999999999999999999998753
No 73
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.4e-34 Score=306.29 Aligned_cols=192 Identities=21% Similarity=0.292 Sum_probs=156.1
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+++.. ++..+|+|.+... .....+.+.+|++++++++||||++++++|.+.+
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 76 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------- 76 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC--------
Confidence 67889999999999999999865 6889999988754 3334567899999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+.. +|+||||||+||++++++.+||+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~ 151 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence 7899999999999999997543 3788888999999999999999742 6999999999999999999999999998
Q ss_pred ccccccccc---c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 641 IVSEDINSV---G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 641 ~~~~~~~~~---~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
......... + ...++......++.++|||||||++|||++|+.|+..
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 152 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred hhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 644221110 1 1111111123456689999999999999999999864
No 74
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6e-34 Score=306.59 Aligned_cols=233 Identities=19% Similarity=0.244 Sum_probs=175.2
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
++||+|+||.||+++. .+|+.||||+++... ......+.+|+.++++++||||+++++++...+ ..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--------~~~l 72 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD--------RLCF 72 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC--------EEEE
Confidence 3689999999999985 478999999987532 233456788999999999999999999887653 7899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
||||+++|+|.+++.+.. .+++.....++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 73 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 73 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 999999999999887543 478999999999999999999997 89999999999999999999999999986432
Q ss_pred ccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 645 DINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 645 ~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
..... + +..++......++.++|||||||++|||+||+.||...... .....+.... ..+ | ..
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~~~~--~~~--p---~~ 217 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE--IRF--P---RT 217 (323)
T ss_pred cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHHcCC--CCC--C---CC
Confidence 11110 1 11111112234567899999999999999999998643221 1111111110 111 1 11
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
. ...+.+++.+|++.||++|| +..|+++
T Consensus 218 ~----~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 218 L----SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred C----CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 1 12367889999999999999 7888864
No 75
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=308.31 Aligned_cols=241 Identities=19% Similarity=0.317 Sum_probs=181.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN----- 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-----
Confidence 356888999999999999999864 68999999986542 233567889999999999999999999988753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 92 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Df 162 (329)
T PTZ00263 92 ---RVYFLLEFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDF 162 (329)
T ss_pred ---EEEEEEcCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeec
Confidence 7899999999999999987643 377888888999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 638 GLSIVSEDINSV-GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 638 Gla~~~~~~~~~-~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
|+++........ .++ .++.......+.++|||||||++|||+||+.||..... ......+.. . ...+ |.
T Consensus 163 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~-~-~~~~--p~ 236 (329)
T PTZ00263 163 GFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--FRIYEKILA-G-RLKF--PN 236 (329)
T ss_pred cCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--HHHHHHHhc-C-CcCC--CC
Confidence 998754332111 111 11111223456789999999999999999999864322 111122211 1 1111 11
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPS-----FEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~~ 749 (766)
..+ ..+.+++.+||+.||.+||+ +++++..
T Consensus 237 ---~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 ---WFD----GRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ---CCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111 23678999999999999997 5666533
No 76
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=303.60 Aligned_cols=239 Identities=23% Similarity=0.386 Sum_probs=186.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|.+.++||+|+||.||||+. .+.+.||+|.+.+..+ .+.+.+.+|++++++++|||||.+++.|....
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~------- 74 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA------- 74 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc-------
Confidence 5688889999999999999985 4789999999976543 44678999999999999999999999988763
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
++|+|+||+.+ +|+.+|...+ .+.......++.++..||.|||+. +|+|||+||.|||++..+++|+||||+
T Consensus 75 -~~~vVte~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 75 -HLWVVTEYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred -eEEEEehhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 79999999998 9999997653 488999999999999999999998 899999999999999999999999999
Q ss_pred Cccccccccc----ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSV----GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~----~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
|+........ .+++ ++......+...+|.||+|||+||+.+|++||.... ....+..+..+ |
T Consensus 147 Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s--i~~Lv~~I~~d--------~ 216 (808)
T KOG0597|consen 147 ARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS--ITQLVKSILKD--------P 216 (808)
T ss_pred hhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH--HHHHHHHHhcC--------C
Confidence 9865443221 1111 111223456678999999999999999999986322 22222223221 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ ......+..+...-+.+||.+|-+-.+++..
T Consensus 217 v~~p---~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 217 VKPP---STASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred CCCc---ccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1111 1223346778888899999999998887643
No 77
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.5e-34 Score=308.01 Aligned_cols=253 Identities=24% Similarity=0.373 Sum_probs=186.1
Q ss_pred cCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
++|++.+.||+|+||+||+|+. .+++.||||.++... ....+.+.+|+.++.++ +||||++++++|...+
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~-- 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG-- 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC--
Confidence 5688899999999999999973 357889999997543 33456788999999999 6899999999987654
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC---------------------------------------------------
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP--------------------------------------------------- 583 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------------------------------------- 583 (766)
...++||||+++|+|.++++....
T Consensus 85 -----~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (343)
T cd05103 85 -----GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLS 159 (343)
T ss_pred -----CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccc
Confidence 357999999999999998864210
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccccc--
Q 004232 584 -------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINS-- 648 (766)
Q Consensus 584 -------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~-- 648 (766)
...++|.....++.++++||+|||+. +|+||||||+||++++++++||+|||++........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 236 (343)
T cd05103 160 DVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV 236 (343)
T ss_pred cchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchh
Confidence 12367888899999999999999997 899999999999999999999999999865322111
Q ss_pred -cc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCCCCH
Q 004232 649 -VG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSL 719 (766)
Q Consensus 649 -~~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 719 (766)
.. +..++......++.++|||||||++|||++ |..|+...... .............. .|.. .+
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~--~~~~---~~- 308 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRRLKEGTRMR--APDY---TT- 308 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHHHhccCCCC--CCCC---CC-
Confidence 00 001111112345668999999999999997 88887642211 11111111111111 1111 11
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 720 ESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 720 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
..+.+++.+||+.||++||++.||++.|+.+.+.
T Consensus 309 ---~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 309 ---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 2367889999999999999999999999988653
No 78
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.5e-34 Score=299.99 Aligned_cols=248 Identities=19% Similarity=0.314 Sum_probs=183.5
Q ss_pred HhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~ 553 (766)
.+++|++.+.||+|+||.||+|... ++..||||.+.... .....++.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 82 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ- 82 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4567999999999999999998742 35679999986432 334567889999999999999999999987653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTP-------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
..++||||+++|+|.+++++... ...++|..+..++.+++.||+|||+. +++||||||+||++
T Consensus 83 -------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~ 152 (277)
T cd05062 83 -------PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 152 (277)
T ss_pred -------CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEE
Confidence 68999999999999999865321 12367888999999999999999986 89999999999999
Q ss_pred cCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHH
Q 004232 627 NEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEE 695 (766)
Q Consensus 627 d~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~ 695 (766)
++++.+|++|||+++....... .. +..++.......+.++|||||||++|||++ |..|+..... ...
T Consensus 153 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~ 230 (277)
T cd05062 153 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQV 230 (277)
T ss_pred cCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHH
Confidence 9999999999999864322111 00 111111112345668999999999999999 6777753221 111
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
...+. ........ . .....+.+++.+||+.+|++||++.|++++|+
T Consensus 231 ~~~~~-~~~~~~~~-----~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 231 LRFVM-EGGLLDKP-----D----NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHH-cCCcCCCC-----C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11111 11111110 1 11234778999999999999999999999886
No 79
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.6e-34 Score=301.94 Aligned_cols=238 Identities=21% Similarity=0.339 Sum_probs=179.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
..++|++..+||+|+||.||.|+. .+|..+|+|++++.. ....+.++.|-.+|...++|.||+|+-.|.+.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~---- 214 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE---- 214 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC----
Confidence 567899999999999999999985 579999999998764 345677889999999999999999998888764
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
.+||||||+||||+..+|.+.. .|+......++.+++.|+.-+|+. ++|||||||+|+|||..|++|++|
T Consensus 215 ----~LYLiMEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 215 ----YLYLIMEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred ----eeEEEEEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecc
Confidence 7999999999999999998654 488888888999999999999998 999999999999999999999999
Q ss_pred CCCCccccccc---------------ccccC---------------------------------CCCCCc-------ccC
Q 004232 637 YGLSIVSEDIN---------------SVGGK---------------------------------QEDPNS-------WEM 661 (766)
Q Consensus 637 FGla~~~~~~~---------------~~~~~---------------------------------~~~~~~-------~~~ 661 (766)
|||+....... ..... .+.|.+ ...
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg 364 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG 364 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC
Confidence 99984321100 00000 011111 122
Q ss_pred CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC
Q 004232 662 TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP 741 (766)
Q Consensus 662 ~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP 741 (766)
++..+|+||+|||||||+.|-+||..... .+.+..+..-. .-+..|.-.. .-.++.+|+.+|+. ||.+|-
T Consensus 365 Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp--~~T~rkI~nwr--~~l~fP~~~~-----~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 365 YGKECDWWSLGCIMYEMLVGYPPFCSETP--QETYRKIVNWR--ETLKFPEEVD-----LSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred CCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHh--hhccCCCcCc-----ccHHHHHHHHHHhc-CHHHhc
Confidence 34568999999999999999999974432 23333332211 1111111101 11347789999999 999996
Q ss_pred C
Q 004232 742 S 742 (766)
Q Consensus 742 s 742 (766)
-
T Consensus 435 G 435 (550)
T KOG0605|consen 435 G 435 (550)
T ss_pred C
Confidence 4
No 80
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9e-34 Score=298.66 Aligned_cols=246 Identities=24% Similarity=0.403 Sum_probs=185.7
Q ss_pred cCCCcCCceecCCceeEEEEEec------CCceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
++|.+.+.||+|+||.||+|+.. ++..||||.++..... ..+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 81 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD--- 81 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC---
Confidence 45777899999999999999853 3578999998765433 4678999999999999999999999988753
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTP-----------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
..++||||+++|+|.+++..... ...+++.....++.+++.|++|||+. +++||||||+||
T Consensus 82 -----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~ni 153 (280)
T cd05049 82 -----PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNC 153 (280)
T ss_pred -----CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceE
Confidence 68999999999999999975421 23478889999999999999999987 899999999999
Q ss_pred EEcCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchH
Q 004232 625 LLNEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQ 693 (766)
Q Consensus 625 Lld~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~ 693 (766)
+++.++.+||+|||++........ .. ...++......++.++|||||||++|||++ |+.|+..... .
T Consensus 154 li~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--~ 231 (280)
T cd05049 154 LVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--E 231 (280)
T ss_pred EEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH--H
Confidence 999999999999999864321110 00 111111122445668999999999999999 9999754322 1
Q ss_pred HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 694 EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 694 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.....+. ....... + .. ....+.+++.+||+.||++||++.||++.|+
T Consensus 232 ~~~~~~~-~~~~~~~--~---~~----~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 EVIECIT-QGRLLQR--P---RT----CPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHHH-cCCcCCC--C---CC----CCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111111 1111110 0 11 1134778999999999999999999999885
No 81
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1e-33 Score=298.28 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=187.4
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCc----eEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGT----SVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~----~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|+..+.||+|+||+||+|++ .+|. .||+|.++.. .....+++.+|+.+++.++||||++++|+|...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~----- 81 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS----- 81 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-----
Confidence 5678889999999999999985 3444 4899998653 334467788999999999999999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++++||+++|+|.+++++.. ..+++...+.++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 82 ----~~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~d 152 (279)
T cd05109 82 ----TVQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITD 152 (279)
T ss_pred ----CcEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECC
Confidence 4689999999999999987643 2488999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc----c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV----G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~----~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ . ...++......++.++|||||||++|||+| |..|+........ .........
T Consensus 153 fG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~~~~~ 229 (279)
T cd05109 153 FGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI---PDLLEKGER 229 (279)
T ss_pred CCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHHHCCCc
Confidence 9998754321110 0 001111112335567899999999999998 8888753322111 111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcccc
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQETA 760 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~~ 760 (766)
... + .. ....+.+++.+||+.||++||++.+++..|+++.+.....
T Consensus 230 ~~~--~---~~----~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05109 230 LPQ--P---PI----CTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRF 275 (279)
T ss_pred CCC--C---cc----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCe
Confidence 110 0 11 1234678999999999999999999999999887655443
No 82
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.6e-34 Score=316.48 Aligned_cols=252 Identities=21% Similarity=0.371 Sum_probs=185.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCC-CCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~ 552 (766)
..++|.+.+.||+|+||.||+|++. .+..||||+++... ....+.+.+|+++|.++. |||||+++|+|.+.+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456777899999999999999853 34689999997543 233457889999999997 999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------------------------------------------
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTP------------------------------------------------- 583 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------------------------------------------- 583 (766)
..++||||+++|+|.+++++...
T Consensus 115 --------~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T cd05107 115 --------PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDES 186 (401)
T ss_pred --------CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccc
Confidence 68999999999999999865321
Q ss_pred ----------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccC
Q 004232 584 ----------------------------------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNN 617 (766)
Q Consensus 584 ----------------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 617 (766)
...++|.....++.+++.||+|||+. +++||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHr 263 (401)
T cd05107 187 ADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHR 263 (401)
T ss_pred cCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcc
Confidence 12367888899999999999999986 89999
Q ss_pred CCCCCceEEcCCCcEEEecCCCCcccccccc---ccc-------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccc
Q 004232 618 RVKTNNILLNEHRIAKLSDYGLSIVSEDINS---VGG-------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAA 686 (766)
Q Consensus 618 dlk~~NILld~~~~~kl~DFGla~~~~~~~~---~~~-------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~ 686 (766)
||||+|||+++++.+|++|||+++....... ... ..++.......+.++|||||||++|||++ |..|+.
T Consensus 264 dlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 264 DLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred cCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999865322110 000 00111111334567899999999999998 888875
Q ss_pred cCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 687 RKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
..... +........+. ....|. .. ...+.+++.+||+.+|.+||+|+||++.|+.+.
T Consensus 344 ~~~~~--~~~~~~~~~~~--~~~~p~---~~----~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 344 ELPMN--EQFYNAIKRGY--RMAKPA---HA----SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CCCch--HHHHHHHHcCC--CCCCCC---CC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 32211 11111111111 111111 11 134778999999999999999999999999864
No 83
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.3e-33 Score=293.73 Aligned_cols=236 Identities=21% Similarity=0.345 Sum_probs=177.6
Q ss_pred ceecCCceeEEEEEe---cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 490 IMGEGSYGKLYKGRL---ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
.||+|+||.||+|.+ .++..+|+|+++... ....+++.+|+.++++++||||++++|++... ..++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---------~~~l 72 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE---------SWML 72 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC---------CcEE
Confidence 589999999999975 357889999986443 33467889999999999999999999988542 4689
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
||||+++|+|.+++.+.. .+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 73 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 73 VMELAELGPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred EEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999999987543 478999999999999999999987 89999999999999999999999999986543
Q ss_pred ccccc-----ccC----CCCCC--cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 645 DINSV-----GGK----QEDPN--SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 645 ~~~~~-----~~~----~~~~~--~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
..... ... ...|. .....+.++|||||||++|||+| |+.|+...... .....+. ....... |
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~-~~~~~~~--~- 220 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIE-SGERMEC--P- 220 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH-CCCCCCC--C-
Confidence 22110 000 00111 11234557999999999999998 89898643221 1122221 1111111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
... ...+.+++.+||+.||++||+|.+|+++|+.
T Consensus 221 --~~~----~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 221 --QRC----PPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred --CCC----CHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 111 1336789999999999999999999999985
No 84
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.6e-35 Score=294.46 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=177.4
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.|...+++|+|+||.||+|.. ++++.||||+.-..++. --+|+++|++++|||||+|.-++....+.++ -..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~---~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDE---VYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCch---hHH
Confidence 355678999999999999995 46799999988655432 2468899999999999999988877654321 146
Q ss_pred EEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcEEEecCCCC
Q 004232 563 FLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAKLSDYGLS 640 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DFGla 640 (766)
.+||||||. +|.+.++.-. .+..++-....-+..|+.+||+|||+. +|+||||||.|+|+|.+ |.+||||||-|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 789999998 8988887421 112244455666899999999999996 89999999999999965 89999999999
Q ss_pred ccccccccc---c----cCCC-CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc--------
Q 004232 641 IVSEDINSV---G----GKQE-DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE-------- 703 (766)
Q Consensus 641 ~~~~~~~~~---~----~~~~-~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~-------- 703 (766)
+........ . ++++ -......++.+.||||.|||+.||+-|++-|..+.... ..++..+...+
T Consensus 174 K~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 174 KVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred eeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 876432211 1 1111 11223456778999999999999999998887533211 11111111100
Q ss_pred --CccccccccccCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 --GRQRLVDPVVMATS-----SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 --~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+...|.+.... ....-.+.++++.++++++|.+|.+..|++..
T Consensus 254 n~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 254 NPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred CcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111222222111 11223457899999999999999999988765
No 85
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.6e-33 Score=293.05 Aligned_cols=237 Identities=22% Similarity=0.363 Sum_probs=177.3
Q ss_pred eecCCceeEEEEEec---CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRLE---NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||.||+|.+. ++..||+|.+.... ....+++.+|+.++++++||||++++|+|... ..++||
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~---------~~~lv~ 73 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE---------ALMLVM 73 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC---------CeEEEE
Confidence 899999999999753 45679999987553 33456799999999999999999999988542 579999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 74 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 148 (257)
T cd05115 74 EMASGGPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD 148 (257)
T ss_pred EeCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCC
Confidence 9999999999987532 3488999999999999999999987 8999999999999999999999999998644321
Q ss_pred ccc-----cc------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 647 NSV-----GG------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 647 ~~~-----~~------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
... .. ..++.......+.++|||||||++||+++ |..|+..... ......+ ........ +
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~-~~~~~~~~-~---- 220 (257)
T cd05115 149 DSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--PEVMSFI-EQGKRLDC-P---- 220 (257)
T ss_pred ccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHH-HCCCCCCC-C----
Confidence 110 00 00111112344568999999999999996 9999864322 1111111 11111110 1
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.. ....+.+++.+||..+|++||+|.+|.+.|+..
T Consensus 221 ~~----~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 221 AE----CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11 123467899999999999999999999999864
No 86
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-33 Score=297.92 Aligned_cols=246 Identities=24% Similarity=0.416 Sum_probs=185.3
Q ss_pred cCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|...+.||+|+||.||+++. .++..+|+|.++.......+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 80 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR---- 80 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC----
Confidence 4567788999999999999963 246689999988766666778999999999999999999999987753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
..+++|||+++|+|.+++....+ ...+++..+..++.|++.|++|||+. +++||||||+||
T Consensus 81 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~ni 153 (280)
T cd05092 81 ----PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNC 153 (280)
T ss_pred ----ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhE
Confidence 57999999999999999875432 13478999999999999999999987 899999999999
Q ss_pred EEcCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchH
Q 004232 625 LLNEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQ 693 (766)
Q Consensus 625 Lld~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~ 693 (766)
++++++.+||+|||++........ .. +..++......++.++|||||||++|||++ |+.|+..... .
T Consensus 154 l~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~ 231 (280)
T cd05092 154 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--T 231 (280)
T ss_pred EEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--H
Confidence 999999999999999864321110 00 111111122345678999999999999999 8888753322 1
Q ss_pred HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 694 EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 694 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
+....+.... ....+. .. ...+.+++.+||+.||.+||++.||.+.|+
T Consensus 232 ~~~~~~~~~~---~~~~~~---~~----~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 EAIECITQGR---ELERPR---TC----PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHHHcCc---cCCCCC---CC----CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111111111 111111 11 123678999999999999999999999886
No 87
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.6e-33 Score=298.57 Aligned_cols=249 Identities=24% Similarity=0.398 Sum_probs=184.1
Q ss_pred CCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
+|++.+.||+|+||.||+|+.. ....||+|.+.... ....+++.+|+.++++++||||++++++|...+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG---- 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC----
Confidence 4677889999999999999842 23579999886543 344577899999999999999999999987653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCC---------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENT---------------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFF 615 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 615 (766)
..++|+||+++|+|.+++.... ....+++...+.++.+++.|++|||+. +++
T Consensus 77 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~iv 149 (290)
T cd05045 77 ----PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLV 149 (290)
T ss_pred ----CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Cee
Confidence 5799999999999999886421 113478999999999999999999987 899
Q ss_pred cCCCCCCceEEcCCCcEEEecCCCCccccccccc----c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCc
Q 004232 616 NNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV----G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSV 684 (766)
Q Consensus 616 Hrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~----~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p 684 (766)
||||||+||++++++.+||+|||++......... . ...++.......+.++|||||||++|||+| |+.|
T Consensus 150 H~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p 229 (290)
T cd05045 150 HRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 229 (290)
T ss_pred hhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998653221110 0 000111111234567899999999999999 8888
Q ss_pred cccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 685 AARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+..... ...+. ...... ....+ ... ...+.+++.+||+.+|.+||+++||++.|+++..
T Consensus 230 ~~~~~~--~~~~~-~~~~~~--~~~~~---~~~----~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 230 YPGIAP--ERLFN-LLKTGY--RMERP---ENC----SEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCH--HHHHH-HHhCCC--CCCCC---CCC----CHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 864321 11111 111110 11001 111 1347789999999999999999999999998753
No 88
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.5e-33 Score=294.95 Aligned_cols=246 Identities=22% Similarity=0.395 Sum_probs=186.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CC---ceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NG---TSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|+..+.||+|+||.||+|+.. ++ ..+|+|.++... ....+.+..|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK----- 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC-----
Confidence 46777899999999999999864 33 379999987542 344677899999999999999999999987653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. ..++|..+..++.+++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 80 ---~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 80 ---PAMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred ---CcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCC
Confidence 6799999999999999987543 3488999999999999999999987 8999999999999999999999999
Q ss_pred CCCcccccccccc-----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 638 GLSIVSEDINSVG-----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 638 Gla~~~~~~~~~~-----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|++.......... +..++......++.++|||||||++|||+| |+.|+..... ......+.. .
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~~-~-- 226 (268)
T cd05063 152 GLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAIND-G-- 226 (268)
T ss_pred ccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhc-C--
Confidence 9986543211110 011111112334567899999999999998 9999864322 111222211 1
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.....+ ......+.+++.+||+.+|++||+|.+|++.|+++
T Consensus 227 ~~~~~~-------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 FRLPAP-------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCC-------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111111 11123478999999999999999999999999875
No 89
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-33 Score=293.76 Aligned_cols=241 Identities=25% Similarity=0.416 Sum_probs=182.4
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+|++.+.||+|+||.||+|...++..+|+|.+..... ....+.+|++++++++||||+++++++.+.+ ..+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~~~ 75 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR--------PIF 75 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--------ceE
Confidence 4677889999999999999987777899998864332 3356888999999999999999999887653 679
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++++|.+++..... .++|.....++.+++.|++|||+. +++||||||+||++++++.+||+|||+++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~ 150 (256)
T cd05059 76 IVTEYMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYV 150 (256)
T ss_pred EEEecCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceec
Confidence 99999999999999875432 478999999999999999999997 8999999999999999999999999998654
Q ss_pred ccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 644 EDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 644 ~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
.+..... ...++......++.++|||||||++|||+| |+.|+..... .+....+.. . .....+
T Consensus 151 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~-~--~~~~~~-- 223 (256)
T cd05059 151 LDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVVESVSA-G--YRLYRP-- 223 (256)
T ss_pred ccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHHHHHHc-C--CcCCCC--
Confidence 3211100 111111112345568999999999999999 7888753322 111222111 1 011111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
... ...+.+++.+||..+|++||+|.||++.|
T Consensus 224 -~~~----~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 224 -KLA----PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -CCC----CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 111 23478899999999999999999999886
No 90
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.7e-33 Score=293.25 Aligned_cols=244 Identities=21% Similarity=0.405 Sum_probs=184.9
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|||++++++++.+. ..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---------~~ 75 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEE---------PI 75 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCC---------Cc
Confidence 45778899999999999999988888999999875433 346789999999999999999999987532 46
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
+++|||+++|+|.+++++.. ...+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~ 151 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARL 151 (260)
T ss_pred EEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeee
Confidence 89999999999999987543 23478999999999999999999997 899999999999999999999999999865
Q ss_pred cccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........ ...++......++.++|||||||++|||++ |..|+..... .+....+.... .... +
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~-~~~~--~- 225 (260)
T cd05070 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQVERGY-RMPC--P- 225 (260)
T ss_pred ccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCC-CCCC--C-
Confidence 43211100 111111112345668999999999999999 8888764221 11122221110 1111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
......+.+++.+|++.+|++|||++++.+.|++
T Consensus 226 ------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 ------QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ------CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112347789999999999999999999998874
No 91
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.6e-33 Score=299.25 Aligned_cols=251 Identities=20% Similarity=0.345 Sum_probs=180.6
Q ss_pred cCCCcCCceecCCceeEEEEEecC---------------CceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN---------------GTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLG 546 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~---------------g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g 546 (766)
++|++.+.||+|+||.||+++... ...||+|.+... .......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 568888999999999999987532 235899998754 2334567999999999999999999999
Q ss_pred eeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccC
Q 004232 547 HCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP---------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNN 617 (766)
Q Consensus 547 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 617 (766)
++...+ ..++||||+++|+|.+++..... ...++|..++.++.+++.|++|||+. +++||
T Consensus 85 ~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~ 153 (295)
T cd05097 85 VCVSDD--------PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHR 153 (295)
T ss_pred EEcCCC--------ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecc
Confidence 997653 67999999999999999864321 12368899999999999999999997 89999
Q ss_pred CCCCCceEEcCCCcEEEecCCCCcccccccc--cccC--------CCCCCcccCCCCCCCEeehhHHHHHHhc--CCCcc
Q 004232 618 RVKTNNILLNEHRIAKLSDYGLSIVSEDINS--VGGK--------QEDPNSWEMTKLEDDVFSFGFMLLESVA--GPSVA 685 (766)
Q Consensus 618 dlk~~NILld~~~~~kl~DFGla~~~~~~~~--~~~~--------~~~~~~~~~~~~~~DV~SfGvil~Ellt--G~~p~ 685 (766)
||||+||++++++.+||+|||++........ .... .++......++.++|||||||++|||++ |..|+
T Consensus 154 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~ 233 (295)
T cd05097 154 DLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPY 233 (295)
T ss_pred ccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999999864322111 0010 1111112345678999999999999998 45565
Q ss_pred ccCcc-chHHHHhhhhcc-cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 686 ARKGQ-FLQEELDSLNSQ-EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 686 ~~~~~-~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
..... ............ ........+. .. ...+.+++.+||+.+|++||+|++|++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 234 SLLSDEQVIENTGEFFRNQGRQIYLSQTP---LC----PSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cccChHHHHHHHHHhhhhccccccCCCCC---CC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 43221 111111111110 0000011111 11 134789999999999999999999999886
No 92
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.6e-33 Score=292.79 Aligned_cols=244 Identities=22% Similarity=0.419 Sum_probs=184.5
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+|++.+.||+|+||.||+|... |..||+|.++... ..+.+.+|+.++++++|+|+++++|++...+ +..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~~~ 75 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-------GGL 75 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCC-------Cce
Confidence 46788899999999999999865 7889999986543 3467889999999999999999999876543 357
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++++... ..+++.....++.+++.||+|||+. +++||||||+||++++++.+|++|||+++.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~ 151 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKE 151 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCcccee
Confidence 999999999999999876432 3478999999999999999999987 899999999999999999999999999865
Q ss_pred cccccccc-----cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 643 SEDINSVG-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 643 ~~~~~~~~-----~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
........ +..++......++.++|||||||++|||++ |+.|+..... ......+.. +...... .
T Consensus 152 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~-~~~~~~~-----~- 222 (256)
T cd05082 152 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEK-GYKMDAP-----D- 222 (256)
T ss_pred ccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhc-CCCCCCC-----C-
Confidence 43221111 111111122345668999999999999998 8888763221 111111111 1111111 1
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
.....+.+++.+||+.+|++||++.++++.|++
T Consensus 223 ---~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 223 ---GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred ---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 112347789999999999999999999999875
No 93
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.7e-33 Score=294.36 Aligned_cols=252 Identities=17% Similarity=0.274 Sum_probs=188.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+. .++..+|||.+.... ....+++.+|+.+++.++||||+++++++.+.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------ 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN------ 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC------
Confidence 4677889999999999999985 578999999886432 334567889999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..+++|||+++++|.+++.... ....+++.....++.+++.|++|||+. +++|+||||+||+++.++.+|++||
T Consensus 76 --~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df 150 (267)
T cd08229 76 --ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred --eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcc
Confidence 6899999999999999886422 234588999999999999999999987 8999999999999999999999999
Q ss_pred CCCccccccccc-----cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSV-----GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~-----~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++......... +. ..++.......+.++||||||+++|||++|..|+.............+. ...
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~ 224 (267)
T cd08229 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE------QCD 224 (267)
T ss_pred hhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh------cCC
Confidence 998654322111 00 1111111234556799999999999999999998643222111111111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.+.... ......+.+++.+||+.+|.+||||.+|+++++++.
T Consensus 225 ~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 225 YPPLPS---DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CCCCCc---ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 111111 112234778899999999999999999999998763
No 94
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.7e-33 Score=295.85 Aligned_cols=234 Identities=24% Similarity=0.377 Sum_probs=171.5
Q ss_pred ceecCCceeEEEEEecC-------------------------CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccc
Q 004232 490 IMGEGSYGKLYKGRLEN-------------------------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCL 544 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~~~-------------------------g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l 544 (766)
.||+|+||.||+|++.. ...||+|.+........+++.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 23589999876555556778889999999999999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
+|+|.+.. ..++||||+++|+|..++.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||
T Consensus 82 ~~~~~~~~--------~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVRGS--------ENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEeCC--------ceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 99998763 6799999999999999886532 3478899999999999999999987 899999999999
Q ss_pred EEcCCC-------cEEEecCCCCccccccccc-c---cCCCCCC-cccCCCCCCCEeehhHHHHHHh-cCCCccccCccc
Q 004232 625 LLNEHR-------IAKLSDYGLSIVSEDINSV-G---GKQEDPN-SWEMTKLEDDVFSFGFMLLESV-AGPSVAARKGQF 691 (766)
Q Consensus 625 Lld~~~-------~~kl~DFGla~~~~~~~~~-~---~~~~~~~-~~~~~~~~~DV~SfGvil~Ell-tG~~p~~~~~~~ 691 (766)
+++..+ .+|++|||++......... + ...++.. .....+.++|||||||++||++ +|+.|+......
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 228 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS 228 (274)
T ss_pred EEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH
Confidence 998643 4899999987543221111 1 1111111 1123466899999999999994 788887643221
Q ss_pred hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 692 LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
.... ..... ..+..+ . ...+.+++.+||+.+|++||+|.+|++.|
T Consensus 229 ~~~~---~~~~~--~~~~~~-----~----~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 229 EKER---FYEKK--HRLPEP-----S----CKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHH---HHHhc--cCCCCC-----C----ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1111 11100 011111 1 12377899999999999999999999887
No 95
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-33 Score=302.75 Aligned_cols=228 Identities=18% Similarity=0.222 Sum_probs=170.7
Q ss_pred eecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||.||+|+.. +++.||+|+++... ......+.+|+.++++++||||+++++++.+.+ ..++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~~~lv~ 72 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE--------KLYLVL 72 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC--------eEEEEE
Confidence 699999999999864 68899999986532 334567788999999999999999999887653 789999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 73 e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 73 AFINGGELFHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 9999999999987543 378899999999999999999997 8999999999999999999999999998653221
Q ss_pred ccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCC
Q 004232 647 NSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSS 718 (766)
Q Consensus 647 ~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 718 (766)
... + +..++......++.++|||||||++|||+||+.||..... ......+.... ..+. ...+
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~--~~~~~~~~~~~--~~~~-----~~~~ 217 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV--NEMYRKILQEP--LRFP-----DGFD 217 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH--HHHHHHHHcCC--CCCC-----CcCC
Confidence 110 1 1111111223456789999999999999999999864322 12122221110 1110 1111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHH
Q 004232 719 LESLSIVISIANKCICSESWSRPSFED 745 (766)
Q Consensus 719 ~~~~~~~~~l~~~C~~~~p~~RPs~~e 745 (766)
..+.+++.+||+.||.+||++..
T Consensus 218 ----~~~~~li~~~L~~dp~~R~~~~~ 240 (312)
T cd05585 218 ----RDAKDLLIGLLSRDPTRRLGYNG 240 (312)
T ss_pred ----HHHHHHHHHHcCCCHHHcCCCCC
Confidence 23678899999999999986533
No 96
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2e-33 Score=293.23 Aligned_cols=245 Identities=22% Similarity=0.385 Sum_probs=185.2
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|.+.+.||+|+||.||+|+..+...||+|+++.... ..+++.+|++++++++||||+++++++.+. ..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~---------~~ 75 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEE---------PI 75 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCC---------Cc
Confidence 45888899999999999999987767899999975432 346789999999999999999999886442 46
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.+.. ...++|..+..++.+++.||+|+|+. +++||||||+||++++++.+||+|||.+..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~ 151 (262)
T cd05071 76 YIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 151 (262)
T ss_pred EEEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceee
Confidence 99999999999999997542 23578999999999999999999997 899999999999999999999999999865
Q ss_pred cccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........ +..++.......+.++|||||||++|||+| |..|+..... ......+.. .. ....
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~~~~~~~~~-~~--~~~~-- 224 (262)
T cd05071 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVER-GY--RMPC-- 224 (262)
T ss_pred ccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--HHHHHHHhc-CC--CCCC--
Confidence 43221110 011111112345668999999999999999 7777753321 111111111 00 0000
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
..+....+.+++.+|++.+|++||++.++.+.|++.
T Consensus 225 -----~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 225 -----PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -----ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 111223477999999999999999999999999874
No 97
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.3e-33 Score=298.29 Aligned_cols=253 Identities=20% Similarity=0.354 Sum_probs=182.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-----------------CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-----------------NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCL 544 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-----------------~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l 544 (766)
++|++.+.||+|+||.||+++.. ++..||+|.+... ......++.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998532 2446999998754 33446789999999999999999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP--------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFN 616 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 616 (766)
++++.+.+ ..++||||+++|+|.+++.+... ...+++.....++.+++.|++|||+. +++|
T Consensus 85 ~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H 153 (296)
T cd05095 85 LAVCITSD--------PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVH 153 (296)
T ss_pred EEEEecCC--------ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceec
Confidence 99987753 57999999999999999875421 12477889999999999999999997 8999
Q ss_pred CCCCCCceEEcCCCcEEEecCCCCcccccccc--cccCC------CCC--CcccCCCCCCCEeehhHHHHHHhc--CCCc
Q 004232 617 NRVKTNNILLNEHRIAKLSDYGLSIVSEDINS--VGGKQ------EDP--NSWEMTKLEDDVFSFGFMLLESVA--GPSV 684 (766)
Q Consensus 617 rdlk~~NILld~~~~~kl~DFGla~~~~~~~~--~~~~~------~~~--~~~~~~~~~~DV~SfGvil~Ellt--G~~p 684 (766)
|||||+||++++++.+|++|||+++....... ..... ..| ......+.++|||||||++|||+| |..|
T Consensus 154 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p 233 (296)
T cd05095 154 RDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP 233 (296)
T ss_pred ccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999865322110 00000 001 111345668999999999999998 5666
Q ss_pred cccCccc-hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 685 AARKGQF-LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 685 ~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
+...... .............. ....+.. . .+...+.+++.+||+.||.+||+|.||.+.|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 234 YSQLSDEQVIENTGEFFRDQGR-QVYLPKP-A----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ccccChHHHHHHHHHHHhhccc-cccCCCC-C----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 6432111 11111111000000 1111110 0 112347789999999999999999999998863
No 98
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5e-33 Score=291.38 Aligned_cols=244 Identities=20% Similarity=0.248 Sum_probs=175.6
Q ss_pred CceecCCceeEEEEEecC---CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 489 AIMGEGSYGKLYKGRLEN---GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
+.||+|+||.||+|...+ +..+|+|.++... ......+.+|+.++++++||||++++|++.+.. ..++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~~~l 72 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT--------PYLL 72 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC--------CcEE
Confidence 368999999999998643 4579999886543 234457888999999999999999999987653 5799
Q ss_pred EEEccCCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 565 VYEFMSNGNFRTHISENTP--GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
||||+++|+|.+++..... ....++.....++.|++.|++|||+. +++||||||+||+++.++++|++|||++..
T Consensus 73 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 73 VMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred EEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccc
Confidence 9999999999999875332 23467778888999999999999997 899999999999999999999999999864
Q ss_pred ccccccc--c----cC--CCCCCcc---------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccC
Q 004232 643 SEDINSV--G----GK--QEDPNSW---------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 643 ~~~~~~~--~----~~--~~~~~~~---------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
....... . .. ...|... ..++.++|||||||++|||++ |+.|+...... +..... ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~~~-~~~~ 226 (269)
T cd05087 150 KYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE--QVLTYT-VREQ 226 (269)
T ss_pred ccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH--HHHHHH-hhcc
Confidence 3221100 0 00 0011110 123568999999999999996 99898643221 111111 1112
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
...+.++....... ..+.+++.+|| .+|++|||++||++.|+
T Consensus 227 ~~~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLKLPKPRLKLPLS----DRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCCCCCCccCCCCC----hHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22333333222222 22567889999 68999999999999875
No 99
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5e-34 Score=288.72 Aligned_cols=239 Identities=22% Similarity=0.349 Sum_probs=186.4
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..|++.+.||+|.||+|-+|+- ..|..||||.+++.+ .++.-.+.+||+||+.++||||++.+.+|...+
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd------ 126 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD------ 126 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc------
Confidence 4578889999999999999984 679999999997654 445667899999999999999999999987653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+.+||||..+|+|++|+.+.+ .|+..+...++.||..|+.|+|.+ +++|||||.+|||||.++++||+|||
T Consensus 127 --KIvivMEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 127 --KIVIVMEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred --eEEEEEEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 7999999999999999998765 388899999999999999999998 89999999999999999999999999
Q ss_pred CCcccccccccccC--------CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSVGGK--------QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~~~~--------~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
++-...+.....+. ++......+..++.|-||+||+||-++.|.-||+... ....+..+.. -.+.+
T Consensus 199 LSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D--hk~lvrQIs~----GaYrE 272 (668)
T KOG0611|consen 199 LSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD--HKRLVRQISR----GAYRE 272 (668)
T ss_pred hhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch--HHHHHHHhhc----ccccC
Confidence 99655433221111 1111111233568899999999999999999997432 2222333321 22233
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
|... ..+..|+.+++..+|++|-|..+|...
T Consensus 273 P~~P--------SdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 273 PETP--------SDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred CCCC--------chHHHHHHHHHhcCcccchhHHHHhhh
Confidence 3221 124467889999999999999998754
No 100
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=319.60 Aligned_cols=242 Identities=17% Similarity=0.225 Sum_probs=182.2
Q ss_pred CCcCCceecCCceeEEEEEec-C-CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-N-GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~-g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+.+++.++|||||+++++|.+.+ ..
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~--------~~ 140 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD--------KL 140 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC--------EE
Confidence 788899999999999999743 3 6789999876655555667888999999999999999999998764 78
Q ss_pred EEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 563 FLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
++||||+++|+|.+++.+. .....+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 9999999999999988643 2233578889999999999999999997 89999999999999999999999999997
Q ss_pred cccccccc------ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSV------GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~------~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
........ .++ .++......++.++|||||||++|||+||+.|+..... ......+.. .... +
T Consensus 218 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--~~~~~~~~~-~~~~----~ 290 (478)
T PTZ00267 218 QYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--REIMQQVLY-GKYD----P 290 (478)
T ss_pred ecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh-CCCC----C
Confidence 64332110 011 11111123456689999999999999999999864322 111111111 1111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. ....+ ..+.+++.+||+.||++||++.+++..
T Consensus 291 ~-~~~~s----~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 291 F-PCPVS----SGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred C-CccCC----HHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 0 01111 236789999999999999999998753
No 101
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-34 Score=271.42 Aligned_cols=258 Identities=17% Similarity=0.270 Sum_probs=193.6
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+.|.+.+.+|+|||..||.++ ..++..+|+|++......+.+...+|++..++++|||++++++++....+. ....
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D---~~~~ 97 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD---GKHE 97 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc---Ccee
Confidence 468888999999999999998 678899999999887777888999999999999999999999998865421 2357
Q ss_pred EEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 562 VFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
.|+++.|...|+|.+.+.... .+..++..+.+.++.+|.+||++||+. .|++.||||||.|||+.+.+.+++.|||-+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 899999999999999987643 334689999999999999999999995 457999999999999999999999999987
Q ss_pred ccccccc-----------------ccccCCCCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh
Q 004232 641 IVSEDIN-----------------SVGGKQEDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 641 ~~~~~~~-----------------~~~~~~~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 700 (766)
....-.- +..++.++.. .....+.++|||||||+||+|+.|..||+..-. .-.++.
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----~GgSla 252 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----QGGSLA 252 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----cCCeEE
Confidence 4321100 0001111110 112345688999999999999999999974211 000110
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
-.-.-.++.-|.-. .. .+.+.++++.|++.||.+||+..+++..++..
T Consensus 253 LAv~n~q~s~P~~~-~y----se~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 LAVQNAQISIPNSS-RY----SEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred EeeeccccccCCCC-Cc----cHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 00000111111111 11 23477899999999999999999999988764
No 102
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.7e-33 Score=303.08 Aligned_cols=233 Identities=18% Similarity=0.239 Sum_probs=174.6
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
++||+|+||.||+++. .+|..||+|+++... ......+.+|+.++++++||||+++++++...+ ..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~--------~~~l 72 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD--------RLCF 72 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC--------EEEE
Confidence 3689999999999985 468999999987542 233456778999999999999999999887653 7899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
||||+++|+|..++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 73 VMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 999999999998886543 478999999999999999999997 89999999999999999999999999986421
Q ss_pred cc-cc-------cccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 645 DI-NS-------VGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 645 ~~-~~-------~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
.. .. ..+..++......++.++|||||||++|||++|+.|+...... .....+.... ..+ | ..
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~~~~~~--~~~--p---~~ 217 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILMEE--IRF--P---RT 217 (323)
T ss_pred CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCC--CCC--C---CC
Confidence 11 10 0111111112234567899999999999999999998643221 1111111111 011 1 11
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
.+ ..+.+++.+|++.||.+|| ++.++++
T Consensus 218 ~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 218 LS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CC----HHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 11 2367889999999999998 7888765
No 103
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.2e-33 Score=291.22 Aligned_cols=252 Identities=18% Similarity=0.279 Sum_probs=189.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++.+.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~------ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN------ 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC------
Confidence 57888999999999999999975 7999999988642 2334567899999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|..++.... ....+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 76 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~ 150 (267)
T cd08224 76 --ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDL 150 (267)
T ss_pred --eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEecc
Confidence 6899999999999999886532 234578999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++......... + ...++.......+.++|||||||++|||++|+.|+................ .......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~ 229 (267)
T cd08224 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEK-CDYPPLP 229 (267)
T ss_pred ceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhc-CCCCCCC
Confidence 998654321110 0 011111112334567899999999999999999986433222221111111 1111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.......+.+++.+||..+|++||++.+|+++|+.+.
T Consensus 230 --------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 --------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 1111234678999999999999999999999999864
No 104
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=305.64 Aligned_cols=241 Identities=18% Similarity=0.258 Sum_probs=180.8
Q ss_pred hcCCCcCCceecCCceeEEEEEecC--CceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN--GTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+|+||.||+|+... +..||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~---- 104 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES---- 104 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC----
Confidence 3568888999999999999998543 3689999986432 233567889999999999999999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 105 ----~~~lv~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 105 ----YLYLVLEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred ----EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 7899999999999999997643 378888999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccc-cccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 637 YGLSIVSEDINS-VGGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 637 FGla~~~~~~~~-~~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
||+++....... ..++ .++......++.++|||||||++|||+||+.||...... .....+... ...+ |
T Consensus 175 FG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~~i~~~--~~~~--p 248 (340)
T PTZ00426 175 FGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIYQKILEG--IIYF--P 248 (340)
T ss_pred CCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHHHHHhcC--CCCC--C
Confidence 999976432211 1111 111111233566899999999999999999998743321 111122111 1111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
...+ ..+.+++.+|++.||.+|+ +++|+.+.
T Consensus 249 ---~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 ---KFLD----NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---CCCC----HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1111 2356889999999999995 78887654
No 105
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.9e-33 Score=290.77 Aligned_cols=242 Identities=21% Similarity=0.343 Sum_probs=176.2
Q ss_pred CceecCCceeEEEEEec----CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|... .+..||+|.+... .....+.+.+|+.+++.++||||++++++|...+ ...+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------~~~~ 73 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE-------GSPL 73 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC-------CCcE
Confidence 46899999999999853 2457999998643 3344678889999999999999999999887543 2468
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||+++|+|.+++.+.. ..+.+.....++.+++.|++|||+. +++||||||+||++++++.+||+|||++...
T Consensus 74 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 74 VVLPYMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred EEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 9999999999999987543 2367888889999999999999987 8999999999999999999999999998643
Q ss_pred ccccc-----c-c------cCCCCCCcccCCCCCCCEeehhHHHHHHhcC-CCccccCccchHHHHhhhhcccCcccccc
Q 004232 644 EDINS-----V-G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAG-PSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 644 ~~~~~-----~-~------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
..... . . ...++.......+.++|||||||++|||++| .+|+..... ......+.. .. ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~-~~--~~~~ 223 (262)
T cd05058 149 YDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQ-GR--RLLQ 223 (262)
T ss_pred cCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhc-CC--CCCC
Confidence 22110 0 0 0001111123345689999999999999996 445542211 111111111 10 0000
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
+. . ....+.+++.+||+.+|++||++.||+++|+++.
T Consensus 224 ~~---~----~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 PE---Y----CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CC---c----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 10 0 1124778999999999999999999999999864
No 106
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.5e-33 Score=292.50 Aligned_cols=245 Identities=24% Similarity=0.451 Sum_probs=184.1
Q ss_pred CCCcCCceecCCceeEEEEEec-CC---ceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NG---TSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g---~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+|++.+.||+|+||.||+|+.. ++ ..||||.++.. .....++|..|+.++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 78 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR------ 78 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC------
Confidence 4677899999999999999864 33 36999998754 3444678999999999999999999999987653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 79 --~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 79 --PVMIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred --ceEEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCc
Confidence 6799999999999999987543 3478999999999999999999987 89999999999999999999999999
Q ss_pred CCccccccccc-------c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccC
Q 004232 639 LSIVSEDINSV-------G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 639 la~~~~~~~~~-------~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
++......... + ...++.......+.++|||||||++||+++ |..|+..... .+....+.. .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~-~- 227 (269)
T cd05065 152 LSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQ-D- 227 (269)
T ss_pred cccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHc-C-
Confidence 98654321110 0 011111112344567999999999999887 9888864322 111111111 1
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.....+ . +....+.+++.+||+.+|++||+|++|+.+|+.+
T Consensus 228 -~~~~~~---~----~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 -YRLPPP---M----DCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -CcCCCc---c----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 011001 1 1123367899999999999999999999999875
No 107
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.8e-33 Score=297.96 Aligned_cols=252 Identities=19% Similarity=0.238 Sum_probs=178.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+.. ++..||+|.++... ......+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 76 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-------- 76 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC--------
Confidence 56888899999999999999854 68999999986433 223456778999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++ +|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 77 ~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 77 CLTLVFEYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred eEEEEEeCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 68999999985 8998886543 3478888999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc-----cc---CCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhh----------
Q 004232 641 IVSEDINSV-----GG---KQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLN---------- 700 (766)
Q Consensus 641 ~~~~~~~~~-----~~---~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~---------- 700 (766)
+........ +. ..++.. ....++.++||||+||++|||+||+.||....... ...+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 151 RAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred eeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence 653221110 00 111111 11234567899999999999999999986432111 11111000
Q ss_pred --cccCccccccccccCCCCH----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 701 --SQEGRQRLVDPVVMATSSL----ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 701 --~~~~~~~~~d~~~~~~~~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..........|........ ..-..+.+++.+|++.||.+|||++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 231 ITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred cccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000001111110000000 01134678999999999999999999974
No 108
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.9e-33 Score=289.78 Aligned_cols=244 Identities=23% Similarity=0.438 Sum_probs=187.0
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|... |+.||||.++.... ..+++.+|+.++++++|+||+++++++.+.+ ..
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~~ 75 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN--------PL 75 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC--------Ce
Confidence 46788899999999999999865 78899999976544 5678899999999999999999999988643 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.+... ..++|..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||.++.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~ 151 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151 (256)
T ss_pred EEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccc
Confidence 999999999999999876532 3589999999999999999999997 899999999999999999999999999865
Q ss_pred cccccccc-----cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 643 SEDINSVG-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 643 ~~~~~~~~-----~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
........ ...++.......+.++||||||+++||+++ |..|+...... .............. + ..
T Consensus 152 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~~~~~~~~--~---~~ 223 (256)
T cd05039 152 ASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPHVEKGYRMEA--P---EG 223 (256)
T ss_pred cccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHhcCCCCCC--c---cC
Confidence 43221111 111111122344567899999999999997 88887643221 11111111111111 1 11
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
....+.+++.+||+.+|++||+++|++++|+.
T Consensus 224 ----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 224 ----CPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ----CCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 12347789999999999999999999999975
No 109
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.6e-33 Score=291.85 Aligned_cols=243 Identities=26% Similarity=0.454 Sum_probs=179.2
Q ss_pred CceecCCceeEEEEEec-CCc--eEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGT--SVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~--~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. ++. .+|+|.++... ....+.+.+|++++.++ +||||++++++|...+ ..+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~--------~~~ 72 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG--------YLY 72 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC--------Cce
Confidence 36899999999999864 343 57888887532 34456788999999999 7999999999987653 579
Q ss_pred EEEEccCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 564 LVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
+||||+++|+|.+++.+.. ....+++..+..++.+++.|++|||+. +++||||||+||++++++
T Consensus 73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~ 149 (270)
T cd05047 73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 149 (270)
T ss_pred EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCC
Confidence 9999999999999987532 112478999999999999999999986 899999999999999999
Q ss_pred cEEEecCCCCccccccccc--c-----cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcc
Q 004232 631 IAKLSDYGLSIVSEDINSV--G-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~--~-----~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 702 (766)
.+|++|||++......... . +..++......++.++|||||||++|||+| |..||..... ......+...
T Consensus 150 ~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~~ 227 (270)
T cd05047 150 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQG 227 (270)
T ss_pred eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--HHHHHHHhCC
Confidence 9999999998532211100 0 111111112345668999999999999997 8888853221 1112222111
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
. ..+.. . .....+.+++.+||+.+|.+||++.||+++|+.+.
T Consensus 228 ~-~~~~~-----~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 228 Y-RLEKP-----L----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C-CCCCC-----C----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 00000 0 11124679999999999999999999999998764
No 110
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=5.4e-33 Score=288.50 Aligned_cols=242 Identities=18% Similarity=0.277 Sum_probs=184.5
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|+.. +++.|++|.+... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------- 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-------- 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC--------
Confidence 4777889999999999999864 6899999998643 3445678899999999999999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++++|.++++... ...+++.....++.+++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 73 KLNIVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 6899999999999999997642 34588999999999999999999986 8999999999999999999999999998
Q ss_pred cccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
+......... ...++.......+.++|||||||++|||+||+.|+..... ......+.. .....+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~~~~~-- 223 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKIIR-GVFPPVSQ-- 223 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHc-CCCCCCcc--
Confidence 6543321110 1111111223456689999999999999999999864332 111111111 11111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+.+++.+||+.+|++||+|.++++.
T Consensus 224 -------~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 224 -------MYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -------ccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 112347889999999999999999999763
No 111
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.8e-33 Score=308.41 Aligned_cols=243 Identities=19% Similarity=0.247 Sum_probs=176.2
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~------- 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD------- 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-------
Confidence 578889999999999999985 468899999996542 234567889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++++||+|||+
T Consensus 75 -~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 75 -NLYFVMDYIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred -EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 7899999999999999987543 377888888999999999999997 899999999999999999999999999
Q ss_pred Cccccccc---------------------------------------------------ccccC----CCCCCcccCCCC
Q 004232 640 SIVSEDIN---------------------------------------------------SVGGK----QEDPNSWEMTKL 664 (766)
Q Consensus 640 a~~~~~~~---------------------------------------------------~~~~~----~~~~~~~~~~~~ 664 (766)
++...... ...++ .++......++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 74321000 00000 000001123456
Q ss_pred CCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHH--hccCCCCCCCC
Q 004232 665 EDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANK--CICSESWSRPS 742 (766)
Q Consensus 665 ~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~--C~~~~p~~RPs 742 (766)
++|||||||++|||+||+.||....... ....+........+ |.. ...+. .+.+++.+ |+..+|..||+
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~i~~~~~~~~~--~~~-~~~s~----~~~dli~~ll~~~~~~~~R~~ 298 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTE--TQLKVINWENTLHI--PPQ-VKLSP----EAVDLITKLCCSAEERLGRNG 298 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHH--HHHHHHccccccCC--CCC-CCCCH----HHHHHHHHHccCcccccCCCC
Confidence 8999999999999999999996433211 11111111111111 110 01122 24566655 66777888999
Q ss_pred HHHHHHH
Q 004232 743 FEDILWN 749 (766)
Q Consensus 743 ~~ev~~~ 749 (766)
+.||+..
T Consensus 299 ~~~~l~h 305 (381)
T cd05626 299 ADDIKAH 305 (381)
T ss_pred HHHHhcC
Confidence 9999764
No 112
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.1e-33 Score=301.57 Aligned_cols=234 Identities=18% Similarity=0.260 Sum_probs=175.7
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
++||+|+||.||+++. .+|+.||||++.... ......+.+|++++++++||||+++++++.+.+ ..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--------~~~l 72 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD--------RLCF 72 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC--------EEEE
Confidence 3689999999999985 468999999997532 234567888999999999999999999887653 7899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
||||+++|+|..++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~Ey~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 73 VMEYVNGGELFFHLSRER---VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred EEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 999999999998886543 488999999999999999999997 89999999999999999999999999986432
Q ss_pred cc-ccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 645 DI-NSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 645 ~~-~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
.. ... + +..++......++.++|||||||++|||+||+.||..... ......+... .. .....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--~~~~~~~~~~----~~---~~p~~ 217 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILME----DI---KFPRT 217 (328)
T ss_pred CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--HHHHHHhccC----Cc---cCCCC
Confidence 11 110 1 1111111123456789999999999999999999864322 1111111111 00 01111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
.+ ..+.+++.+|++.||.+|| ++.|+++.
T Consensus 218 ~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 218 LS----ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CC----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11 2367889999999999997 88888754
No 113
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=3.5e-33 Score=290.90 Aligned_cols=245 Identities=22% Similarity=0.397 Sum_probs=186.1
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.++||+|+||.||+|...+++.||+|.+..... ..+++.+|+.++++++||||+++++++.+. .
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---------~ 74 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVTQE---------P 74 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEccC---------C
Confidence 356888899999999999999988899999999875443 346789999999999999999999886432 5
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.+++|||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +++||||||+||++++++.++++|||++.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCccee
Confidence 799999999999999886543 34588999999999999999999987 89999999999999999999999999986
Q ss_pred cccccc-cc--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDIN-SV--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~-~~--------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
...... .. .+..++.......+.++|||||||++||+++ |+.|+..... ......+.. ...... +
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~-~~~~~~--~ 225 (260)
T cd05067 151 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQNLER-GYRMPR--P 225 (260)
T ss_pred ecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHHc-CCCCCC--C
Confidence 543111 10 0111111112334568999999999999999 9999864322 111111111 101111 0
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
... ...+.+++.+||+.+|++||+++++...|+.
T Consensus 226 ---~~~----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 ---DNC----PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---CCC----CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111 1347889999999999999999999998864
No 114
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-33 Score=297.18 Aligned_cols=253 Identities=19% Similarity=0.408 Sum_probs=188.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 356778899999999999999741 34579999986532 34457789999999999 899999999998765
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
. ..++||||+++|+|.+++.+... ...++|..+..++.|++.||+|||+. +++|||
T Consensus 94 ~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~d 162 (304)
T cd05101 94 G--------PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRD 162 (304)
T ss_pred C--------ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecc
Confidence 3 67999999999999999875421 23478899999999999999999997 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCcccccccccc----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCcccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVSEDINSVG----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAAR 687 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~ 687 (766)
|||+||++++++.+||+|||+++......... +..++......++.++|||||||++|||+| |..|+..
T Consensus 163 lkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 242 (304)
T cd05101 163 LAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 242 (304)
T ss_pred cccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 99999999999999999999986543211110 011111112345668999999999999998 6777753
Q ss_pred CccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 688 KGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
.. ..+....+.. ..... .+ ......+.+++.+||+.+|.+||+|.||++.|+++....
T Consensus 243 ~~--~~~~~~~~~~-~~~~~--~~-------~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 243 IP--VEELFKLLKE-GHRMD--KP-------ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred CC--HHHHHHHHHc-CCcCC--CC-------CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 22 1222222211 11110 11 011234778999999999999999999999999887643
No 115
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-33 Score=303.52 Aligned_cols=246 Identities=18% Similarity=0.277 Sum_probs=188.7
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+.|++.+.||+|+-|.|-.|+ ..+|+.+|||.+.... ......+++||.+|+-+.|||++++++++...
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~------- 84 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENK------- 84 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccC-------
Confidence 557788999999999999998 5689999999997652 22346789999999999999999999998765
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..+|+|.||+++|.|++++.++++ +...+..+++.||..|+.|+|+. +|+||||||+|+|||.+..+||+|||
T Consensus 85 -~~lylvlEyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 85 -QHLYLVLEYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred -ceEEEEEEecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccc
Confidence 479999999999999999987654 78889999999999999999997 89999999999999999999999999
Q ss_pred CCccccccc----ccc---cCCCCCCcc-cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDIN----SVG---GKQEDPNSW-EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~----~~~---~~~~~~~~~-~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+|.+-.... +++ +..++.... .+.+.++||||.|||||.|+||+-||+.+. ....+-.+.. +..++.+
T Consensus 158 MAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN--ir~LLlKV~~--G~f~MPs 233 (786)
T KOG0588|consen 158 MASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN--IRVLLLKVQR--GVFEMPS 233 (786)
T ss_pred eeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc--HHHHHHHHHc--CcccCCC
Confidence 995432211 111 111221222 233568999999999999999999998432 2222222211 1222221
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.. ..++.+|+.+++..||.+|-|++||.+.--....
T Consensus 234 -----~I----s~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 234 -----NI----SSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred -----cC----CHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 11 1236688999999999999999999987544433
No 116
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-33 Score=298.73 Aligned_cols=251 Identities=20% Similarity=0.390 Sum_probs=187.2
Q ss_pred cCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
++|.+.+.||+|+||.||+++.. +...+|+|.++... ....+++.+|+++++++ +||||++++++|.+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56888999999999999999742 23579999997542 33456788899999999 7999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV 619 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl 619 (766)
..++||||+++|+|.+++....+ ...++|.+++.++.+++.||+|||+. +++||||
T Consensus 98 --------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dl 166 (307)
T cd05098 98 --------PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDL 166 (307)
T ss_pred --------ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ccccccc
Confidence 68999999999999999976432 23488999999999999999999987 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCcccccccc----cc------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccC
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVSEDINS----VG------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARK 688 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~~~~~~----~~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~ 688 (766)
||+||++++++.+||+|||++........ .. ...++......++.++|||||||++|||++ |..|+...
T Consensus 167 kp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 167 AARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred cHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999865432110 00 011111112335668999999999999998 77887532
Q ss_pred ccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 689 GQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
.. ......+ ......+. .......+.+++.+||+.+|++||+|.+|++.|+++.+.
T Consensus 247 ~~--~~~~~~~-~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 247 PV--EELFKLL-KEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred CH--HHHHHHH-HcCCCCCC---------CCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 21 1111111 11111110 011123477899999999999999999999999998754
No 117
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3e-33 Score=295.93 Aligned_cols=252 Identities=19% Similarity=0.257 Sum_probs=179.5
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG------- 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-------
Confidence 36888899999999999999975 68899999986542 233567888999999999999999999987653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||++++.+..+.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 74 -~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 74 -KLYLVFEYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred -EEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 689999999998776554322 3478889999999999999999987 899999999999999999999999999
Q ss_pred Cccccccccc------cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhhh---------
Q 004232 640 SIVSEDINSV------GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSLN--------- 700 (766)
Q Consensus 640 a~~~~~~~~~------~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~~--------- 700 (766)
+......... +. ..++......++.++|||||||++|||++|+.||........ ..+..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (287)
T cd07848 147 ARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMK 226 (287)
T ss_pred cccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHH
Confidence 8654321110 00 111111123456689999999999999999999864321110 0011100
Q ss_pred ---cccCccccccccccCCCCH------HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 701 ---SQEGRQRLVDPVVMATSSL------ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 701 ---~~~~~~~~~d~~~~~~~~~------~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..........+........ .....+.+++.+|++.||++|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 227 LFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000100000000 01234789999999999999999999875
No 118
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.1e-33 Score=299.70 Aligned_cols=252 Identities=19% Similarity=0.284 Sum_probs=178.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 76 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE------- 76 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-------
Confidence 367889999999999999999965 689999999865432 22346778999999999999999999988653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||++ |+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 77 -~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 77 -TLTLVFEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred -eEEEEEECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 6899999996 57877776542 2478888899999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc-----ccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh---cccCc--
Q 004232 640 SIVSEDINSV-----GGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN---SQEGR-- 705 (766)
Q Consensus 640 a~~~~~~~~~-----~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~---~~~~~-- 705 (766)
+......... +... ..|.. ....+.++||||+||++|||+||+.||..... ....+..+. .....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~ 228 (303)
T cd07869 150 ARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKD-IQDQLERIFLVLGTPNEDT 228 (303)
T ss_pred ceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCcc-HHHHHHHHHHHhCCCChhh
Confidence 8643221111 0000 01111 12245578999999999999999999874322 111111110 00000
Q ss_pred ----c--cccccccc---CCCCH-H------HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 ----Q--RLVDPVVM---ATSSL-E------SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ----~--~~~d~~~~---~~~~~-~------~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ...++... ..... + ....+.+++.+|++.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 229 WPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0 00000000 00000 0 1134678999999999999999999975
No 119
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.4e-33 Score=295.07 Aligned_cols=248 Identities=24% Similarity=0.402 Sum_probs=184.2
Q ss_pred hcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
+++|.+.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-- 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--
Confidence 466888899999999999999864 36789999886543 334567899999999999999999999887653
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
..++||||+++|+|.+++.+... ...++|..+..++.+|+.|++|||+. +++||||||+||+++.++
T Consensus 83 ------~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 83 ------PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKG 153 (277)
T ss_pred ------CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccC
Confidence 57999999999999999876432 12488999999999999999999997 799999999999998654
Q ss_pred ---cEEEecCCCCccccccccc--c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 631 ---IAKLSDYGLSIVSEDINSV--G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 631 ---~~kl~DFGla~~~~~~~~~--~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
.+|++|||+++........ . ...++.......+.++|||||||++|||++ |..||..... ....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~~~~ 231 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--QEVM 231 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHH
Confidence 6999999998754221110 0 011111112345678999999999999997 8888864322 1111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
..+.... ... .+ ... ...+.+++.+||+.+|++||++.+|++.|++
T Consensus 232 ~~~~~~~-~~~--~~---~~~----~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 232 EFVTGGG-RLD--PP---KGC----PGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHcCC-cCC--CC---CCC----CHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1111111 000 01 111 1347789999999999999999999998863
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.4e-33 Score=319.25 Aligned_cols=256 Identities=20% Similarity=0.257 Sum_probs=187.0
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
....++|.+.+.||+|+||+||+|+. .+|+.||||++... .......+.+|+.++..++|+||+++++.+...+...
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457899999999999999999984 57999999998643 2344567889999999999999999988765443211
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
......+++||||+++|+|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEE
Confidence 111124789999999999999986532 234588889999999999999999997 8999999999999999999999
Q ss_pred ecCCCCccccccccc-------c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 635 SDYGLSIVSEDINSV-------G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 635 ~DFGla~~~~~~~~~-------~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
+|||+++........ + +..++......++.++|||||||++|||++|+.||..... ...+..... ..
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--~~~~~~~~~-~~ 261 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--EEVMHKTLA-GR 261 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc-CC
Confidence 999998654321100 0 0111111123456789999999999999999999864322 122221111 11
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. ++ ..... ...+.+++.+||+.||.+||++.++++.
T Consensus 262 ~----~~-~~~~~----~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 262 Y----DP-LPPSI----SPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred C----CC-CCCCC----CHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1 11 00111 1347789999999999999999999864
No 121
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.3e-33 Score=291.50 Aligned_cols=246 Identities=23% Similarity=0.428 Sum_probs=185.0
Q ss_pred cCCCcCCceecCCceeEEEEEec----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.+|++.+.||+|+||.||+|+.. .+..+|+|.++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK----- 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----
Confidence 45778899999999999999853 23479999987543 334578899999999999999999999987653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. ..+++.+...++.+++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 79 ---~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 79 ---PVMIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred ---ccEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 6799999999999999997543 3478999999999999999999987 8999999999999999999999999
Q ss_pred CCCcccccccccc-----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 638 GLSIVSEDINSVG-----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 638 Gla~~~~~~~~~~-----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|++.......... ...++......++.++|||||||++||+++ |..|+..... .+....+.. .
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~~-~-- 225 (267)
T cd05066 151 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIKAIEE-G-- 225 (267)
T ss_pred CcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHHHHhC-C--
Confidence 9986543221100 011111112345668999999999999887 9988864321 111222211 1
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.....+ .. ....+.+++.+||+.+|.+||+|.+|++.|+++
T Consensus 226 ~~~~~~---~~----~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 YRLPAP---MD----CPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CcCCCC---CC----CCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 011111 11 123467899999999999999999999999875
No 122
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-33 Score=296.58 Aligned_cols=245 Identities=20% Similarity=0.349 Sum_probs=181.4
Q ss_pred CCCcCCceecCCceeEEEEEec------CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
+|++.+.||+|+||.||+|+.. ++..||||+++.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~---- 81 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ---- 81 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC----
Confidence 3566788999999999999853 357899999975433 33567889999999999999999999988753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~N 623 (766)
..++++||+++++|.+++.... ....+++..+..++.|++.||+|+|+. +|+||||||+|
T Consensus 82 ----~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~N 154 (283)
T cd05091 82 ----PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRN 154 (283)
T ss_pred ----ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhh
Confidence 5799999999999999885321 112478888999999999999999987 89999999999
Q ss_pred eEEcCCCcEEEecCCCCccccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccch
Q 004232 624 ILLNEHRIAKLSDYGLSIVSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFL 692 (766)
Q Consensus 624 ILld~~~~~kl~DFGla~~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~ 692 (766)
|++++++.+||+|||+++........ . +..++.......+.++|||||||++|||+| |..|+.... .
T Consensus 155 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--~ 232 (283)
T cd05091 155 VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--N 232 (283)
T ss_pred eEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC--H
Confidence 99999999999999998654321110 0 011111112345668999999999999998 777775322 1
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.+....+.... ...+ .. .....+.+++.+||+.+|.+||+|+||++.|+
T Consensus 233 ~~~~~~i~~~~-~~~~-----~~----~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 233 QDVIEMIRNRQ-VLPC-----PD----DCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHHHcCC-cCCC-----CC----CCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 22222221111 1111 11 11233778999999999999999999999886
No 123
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=8.9e-34 Score=281.73 Aligned_cols=254 Identities=19% Similarity=0.258 Sum_probs=181.7
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhh--HHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYT--VRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|+..+.|++|.||.||+|+. ++++.||.|+++..+... --.-.|||.+|.+++|||||.+..+.....
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~------ 148 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN------ 148 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc------
Confidence 45677789999999999999984 578999999998654221 223578999999999999999988776543
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+.+|||||||+. ||...+.... ..+...+...+..|+.+|++|||++ -|+|||||++|+|+...|.+||+|||
T Consensus 149 ~d~iy~VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 149 MDKIYIVMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred cceeeeeHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 2469999999998 8999887654 3477778888999999999999998 78999999999999999999999999
Q ss_pred CCcccccccccc--------cCC-CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-cCcccc
Q 004232 639 LSIVSEDINSVG--------GKQ-EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-EGRQRL 708 (766)
Q Consensus 639 la~~~~~~~~~~--------~~~-~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 708 (766)
+|+...+....- +.. +.......++...|+||+|||+.||+++++-|..... .+.+..+... +...+-
T Consensus 223 LAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE--~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 223 LAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE--IDQLDKIFKLLGTPSEA 300 (419)
T ss_pred hhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch--HHHHHHHHHHhCCCccc
Confidence 998765431110 011 1111223466788999999999999999988874432 2222221110 000000
Q ss_pred ccccc-------------------cCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVV-------------------MATSSLE-SLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~-------------------~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.|.. ....... .-..-.+|....+.+||.+|-|++|.++.
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 01100 0000000 11345788899999999999999987653
No 124
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-33 Score=293.75 Aligned_cols=246 Identities=17% Similarity=0.261 Sum_probs=182.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++...+ .
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~--------~ 80 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE--------K 80 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC--------E
Confidence 5688899999999999999985 578899999987654445567889999999999999999999987653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.++++... .+++..+..++.|++.|++|||+. +|+|||+||+||++++++.+||+|||++.
T Consensus 81 ~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 81 LWICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred EEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccce
Confidence 899999999999999887543 478899999999999999999987 89999999999999999999999999986
Q ss_pred ccccccc--c---c---cCCCCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 642 VSEDINS--V---G---GKQEDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 642 ~~~~~~~--~---~---~~~~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
....... . + ...++.. .....+.++|||||||++|||++|+.|+...... .....+.. ..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~--~~~~~~~~----~~~~~ 228 (267)
T cd06646 155 KITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM--RALFLMSK----SNFQP 228 (267)
T ss_pred eecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--hhheeeec----CCCCC
Confidence 5422111 0 0 0111110 1122445789999999999999999987532211 11111100 01111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
+..... ......+.+++.+||+.+|++||++++|++.|
T Consensus 229 ~~~~~~--~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 229 PKLKDK--TKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCccc--cccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111000 01123477899999999999999999998643
No 125
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5e-33 Score=293.46 Aligned_cols=250 Identities=22% Similarity=0.350 Sum_probs=186.6
Q ss_pred CCCcCCceecCCceeEEEEEec-----CCceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-----NGTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+|+..+.||+|+||.||+|++. ++..||||.++..... ..+.+.+|++++++++||||+++++++...++
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~---- 80 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG---- 80 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC----
Confidence 4667789999999999999854 3688999999765443 56789999999999999999999999876432
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||+++|+|.+++..... .++|..+..++.+++.||+|||+. +++||||||+||+++.++.+|++||
T Consensus 81 --~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 153 (284)
T cd05038 81 --RSLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDF 153 (284)
T ss_pred --CceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEccc
Confidence 358999999999999999976532 488999999999999999999987 8999999999999999999999999
Q ss_pred CCCccccccccc---c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch------------HH
Q 004232 638 GLSIVSEDINSV---G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL------------QE 694 (766)
Q Consensus 638 Gla~~~~~~~~~---~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~------------~~ 694 (766)
|++......... . ...++.......+.++||||||+++|||+||+.|+....... ..
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05038 154 GLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVT 233 (284)
T ss_pred ccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHH
Confidence 998654321110 0 001111112345567999999999999999998865321111 01
Q ss_pred HHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 695 ELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 695 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.+........ .... .......+.+++.+||+.+|++||+|.||+++|+.+
T Consensus 234 ~~~~~~~~~~--~~~~-------~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 234 RLLELLKEGE--RLPR-------PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHcCC--cCCC-------CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111111000 0000 111123478899999999999999999999999875
No 126
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.9e-33 Score=288.68 Aligned_cols=239 Identities=22% Similarity=0.323 Sum_probs=180.0
Q ss_pred CceecCCceeEEEEEecC----CceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|.+.. +..+|+|.+..... ...+++.+|++++++++|||||++++++... ..+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---------~~~ 71 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE---------PLM 71 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC---------ceE
Confidence 468999999999997532 36899999875543 3456789999999999999999999987642 579
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|.+++.+.. .+++..+..++.+++.|++|||.. +++||||||+||+++.++.+||+|||+++..
T Consensus 72 ~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 72 LVMELAPLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EEEEeCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999999997653 478999999999999999999987 8999999999999999999999999998654
Q ss_pred ccccccc-----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 644 EDINSVG-----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 644 ~~~~~~~-----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
....... ...++.......+.++|||||||++|||++ |..|+..... ......+.. .. ....+
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~-~~--~~~~~ 220 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLES-GE--RLPRP 220 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHc-CC--cCCCC
Confidence 3221110 001111112335568999999999999998 8998864322 111111111 11 11111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.. ....+.+++.+||..+|++||++.+|.+.|+.+.
T Consensus 221 ---~~----~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 221 ---EE----CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred ---CC----CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 11 1134778999999999999999999999998753
No 127
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.6e-33 Score=294.15 Aligned_cols=253 Identities=20% Similarity=0.349 Sum_probs=183.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecC-----------------CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCccc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN-----------------GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVC 543 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~-----------------g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~ 543 (766)
..+|++.+.||+|+||.||+|+... +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568889999999999999987532 3468999987543 345678999999999999999999
Q ss_pred ccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 004232 544 LLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP--------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFF 615 (766)
Q Consensus 544 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 615 (766)
++++|...+ ..++|+||+++++|.+++.+... ...+++.....++.+++.||+|||+. +|+
T Consensus 84 ~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~ 152 (296)
T cd05051 84 LLGVCTVDP--------PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFV 152 (296)
T ss_pred EEEEEecCC--------CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Ccc
Confidence 999987653 67999999999999999876431 12588999999999999999999987 899
Q ss_pred cCCCCCCceEEcCCCcEEEecCCCCcccccccc--ccc--------CCCCCCcccCCCCCCCEeehhHHHHHHhc--CCC
Q 004232 616 NNRVKTNNILLNEHRIAKLSDYGLSIVSEDINS--VGG--------KQEDPNSWEMTKLEDDVFSFGFMLLESVA--GPS 683 (766)
Q Consensus 616 Hrdlk~~NILld~~~~~kl~DFGla~~~~~~~~--~~~--------~~~~~~~~~~~~~~~DV~SfGvil~Ellt--G~~ 683 (766)
||||||+||+++.++.+|++|||++........ ... ..++.......+.++|||||||++|||++ |..
T Consensus 153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 232 (296)
T cd05051 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQ 232 (296)
T ss_pred ccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCC
Confidence 999999999999999999999999864322110 000 11111112345678999999999999998 566
Q ss_pred ccccCccc-hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 684 VAARKGQF-LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 684 p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
|+...... ..................+ .. . .....+.+++.+||+.||.+||++.||++.|+
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 233 PYEHLTDQQVIENAGHFFRDDGRQIYLP-RP-P----NCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCcChHHHHHHHHhccccccccccCC-Cc-c----CCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 66432211 1111111111111111010 00 0 11134789999999999999999999999886
No 128
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.8e-33 Score=306.42 Aligned_cols=244 Identities=21% Similarity=0.316 Sum_probs=175.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||+||+++. .+++.||||++.... ......+.+|+.++.+++||||+++++++.+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~------ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL------ 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC------
Confidence 4688899999999999999985 468999999997543 233457888999999999999999999888753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++++||+|||
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 75 --NLYLIMEFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred --eEEEEEcCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 6899999999999999997643 488999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc----------------------------------------ccc---CCCCCCcccCCCCCCCEeehhHHH
Q 004232 639 LSIVSEDINS----------------------------------------VGG---KQEDPNSWEMTKLEDDVFSFGFML 675 (766)
Q Consensus 639 la~~~~~~~~----------------------------------------~~~---~~~~~~~~~~~~~~~DV~SfGvil 675 (766)
+++....... .++ ..++......++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 9864321100 000 000101113355689999999999
Q ss_pred HHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHH--hccCCCCCCCCHHHHHHH
Q 004232 676 LESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANK--CICSESWSRPSFEDILWN 749 (766)
Q Consensus 676 ~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~--C~~~~p~~RPs~~ev~~~ 749 (766)
|||++|+.||..... ......+.... ..+..|... ..+.+ +.+++.+ |...++..||+++||++.
T Consensus 227 ~ell~G~~Pf~~~~~--~~~~~~i~~~~--~~~~~p~~~-~~s~~----~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 227 YEMLIGYPPFCSETP--QETYKKVMNWK--ETLIFPPEV-PISEK----AKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HHHHhCCCCCCCCCH--HHHHHHHHcCc--CcccCCCcC-CCCHH----HHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 999999999964322 12222221111 111111111 11222 3344444 433455567999999875
No 129
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=4e-33 Score=295.24 Aligned_cols=251 Identities=18% Similarity=0.281 Sum_probs=184.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~ 553 (766)
..++|++.+.||+|+||.||+|... .+..||+|.++... ......+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 82 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ- 82 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-
Confidence 4567888999999999999999743 24589999886543 233456788999999999999999999987653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTP-------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
..++||||+++|+|.+++.+... ....++.....++.+++.||+|||+. +|+||||||+||++
T Consensus 83 -------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili 152 (288)
T cd05061 83 -------PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMV 152 (288)
T ss_pred -------CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEE
Confidence 57999999999999999975321 12356778889999999999999987 89999999999999
Q ss_pred cCCCcEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHH
Q 004232 627 NEHRIAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEE 695 (766)
Q Consensus 627 d~~~~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~ 695 (766)
++++.+|++|||+++....... .. ...++.......+.++|||||||++|||++ |..|+..... .+.
T Consensus 153 ~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~ 230 (288)
T cd05061 153 AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQV 230 (288)
T ss_pred cCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 9999999999999864322110 00 011111112344668899999999999999 6777753221 111
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
...+.... .... + ......+.+++.+|++.+|++||++.++++.|++..
T Consensus 231 ~~~~~~~~-~~~~--~-------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGG-YLDQ--P-------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCC-CCCC--C-------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11111111 1110 0 011234789999999999999999999999998754
No 130
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.4e-33 Score=286.56 Aligned_cols=238 Identities=21% Similarity=0.402 Sum_probs=179.7
Q ss_pred CceecCCceeEEEEEecCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEE
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYE 567 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~E 567 (766)
++||+|+||.||+|...++..||+|.+.... ......+.+|++++++++||||++++++|.+.+ ..++|||
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ--------PIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC--------ccEEEEE
Confidence 3689999999999998888999999987543 333457889999999999999999999987653 5799999
Q ss_pred ccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccc
Q 004232 568 FMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN 647 (766)
Q Consensus 568 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~ 647 (766)
|+++|+|.+++.... ..+++..+..++.+++.||.|+|+. +++||||||+||++++++.+|++|||++.......
T Consensus 73 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 73 LVPGGDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred CCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccc
Confidence 999999999886543 2478999999999999999999987 89999999999999999999999999986432211
Q ss_pred cc-c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCCC
Q 004232 648 SV-G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATS 717 (766)
Q Consensus 648 ~~-~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 717 (766)
.. . ...++......++.++|||||||++||+++ |..|+..... ......+.. ...... + .
T Consensus 148 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--~~~~~~~~~-~~~~~~--~---~-- 217 (250)
T cd05085 148 YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--QQAREQVEK-GYRMSC--P---Q-- 217 (250)
T ss_pred cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHHc-CCCCCC--C---C--
Confidence 10 0 011111112335568999999999999998 8888864321 111111111 111111 1 0
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 718 SLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 718 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.....+.+++.+||+.+|++||++.||.++|.
T Consensus 218 --~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 --KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred --CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 11234788999999999999999999998874
No 131
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.6e-33 Score=290.76 Aligned_cols=250 Identities=19% Similarity=0.282 Sum_probs=183.3
Q ss_pred HHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 478 LKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 478 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++.+++++.....||+|+||.||+|+. .++..||+|.+........+.+.+|+.++++++||||++++|++.+.+
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 78 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG---- 78 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC----
Confidence 344567777778999999999999985 467889999987766666778999999999999999999999988753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEe
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLS 635 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~ 635 (766)
..++|+||+++++|.++++........++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+
T Consensus 79 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~ 151 (268)
T cd06624 79 ----FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKIS 151 (268)
T ss_pred ----EEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEe
Confidence 6899999999999999987542211127788888999999999999987 8999999999999986 6799999
Q ss_pred cCCCCccccccccc----ccC--CCCCCcc----cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 636 DYGLSIVSEDINSV----GGK--QEDPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 636 DFGla~~~~~~~~~----~~~--~~~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|||++......... .+. ...|... ...+.++|||||||++|||++|+.|+..........+. ......
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~-~~~~~~- 229 (268)
T cd06624 152 DFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK-VGMFKI- 229 (268)
T ss_pred cchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-hhhhcc-
Confidence 99998643221110 000 0111111 12456899999999999999999998642221111111 000000
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+.+.. .....+.+++.+||+.+|.+||+|.||+.
T Consensus 230 ----~~~~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 ----HPEIPE----SLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ----CCCCCc----ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 011111 11233678899999999999999999875
No 132
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=283.84 Aligned_cols=256 Identities=20% Similarity=0.330 Sum_probs=185.1
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccC--ChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPS--SKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~--~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..|...+.||+|+||.|..+.. .+|+.||||++.. ......++..||+++|+.++|+|||.+++.+..+. . ...
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~-~--~~f 98 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS-R--DKF 98 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc-c--ccc
Confidence 3444467899999999999984 5799999999973 34556788899999999999999999999887632 1 123
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
+.+|+|+|+|+- ||.+.++... .++......+..|+.+||.|+|+. +|+||||||+|+|++.+...||+|||+
T Consensus 99 ~DvYiV~elMet-DL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELMET-DLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHhh-HHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 679999999954 8999887643 378888888999999999999998 899999999999999999999999999
Q ss_pred Cccccccc-------ccccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHH-----------
Q 004232 640 SIVSEDIN-------SVGGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EEL----------- 696 (766)
Q Consensus 640 a~~~~~~~-------~~~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~----------- 696 (766)
|+..+... ...+. ++....+..++...||||.|||+.||++|++-|.......+ ..+
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 98774320 01111 11223445677788999999999999999988875432111 111
Q ss_pred -hhhhcccCcccccccc-ccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 697 -DSLNSQEGRQRLVDPV-VMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 697 -~~~~~~~~~~~~~d~~-~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.... ....+... ..+..+. ..-..+++|..+.+..||.+|+|.+|.++.
T Consensus 252 l~~i~s~~-ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 252 LQKIRSEK-ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhccHH-HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1111000 00010000 0000000 112347899999999999999999998765
No 133
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.5e-33 Score=307.12 Aligned_cols=242 Identities=21% Similarity=0.321 Sum_probs=178.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~------ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN------ 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC------
Confidence 46888999999999999999864 68999999997532 233466888999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 --~~~lv~E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 75 --YLYLIMEYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred --eEEEEECCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 7899999999999999987643 488899999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc-------------------------------------------ccc---CCCCCCcccCCCCCCCEeehh
Q 004232 639 LSIVSEDINS-------------------------------------------VGG---KQEDPNSWEMTKLEDDVFSFG 672 (766)
Q Consensus 639 la~~~~~~~~-------------------------------------------~~~---~~~~~~~~~~~~~~~DV~SfG 672 (766)
+++....... .++ ..++......++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 9864321100 000 000001112345689999999
Q ss_pred HHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCC---HHHHHH
Q 004232 673 FMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPS---FEDILW 748 (766)
Q Consensus 673 vil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs---~~ev~~ 748 (766)
|++|||++|..||..... ......+... ...+..|... ..+ ..+.+++.+|+. +|.+|++ +.|+++
T Consensus 227 ~il~el~~G~~Pf~~~~~--~~~~~~i~~~--~~~~~~~~~~-~~s----~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNP--QETYRKIINW--KETLQFPDEV-PLS----PEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred hHHHHhhcCCCCCCCCCH--HHHHHHHHcC--CCccCCCCCC-CCC----HHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999999999999874332 1111111110 1111111100 111 235677888886 8999998 887765
No 134
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.2e-33 Score=302.97 Aligned_cols=256 Identities=21% Similarity=0.355 Sum_probs=179.2
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.|++.+.||+|+||.||+|+. .+|..||||+++.. .......+.+|++++++++||||+++++++...... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---~~~ 77 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR---EFK 77 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC---CCc
Confidence 377789999999999999985 47899999998643 223345788999999999999999999998754311 113
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 78 DIYVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred eEEEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 5899999996 68988886543 488999999999999999999997 8999999999999999999999999998
Q ss_pred cccccccc--------cccCC-CCCCc----ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcc----
Q 004232 641 IVSEDINS--------VGGKQ-EDPNS----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQ---- 702 (766)
Q Consensus 641 ~~~~~~~~--------~~~~~-~~~~~----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~---- 702 (766)
+....... .+... ..|.. ...++.++|||||||++|||+||+.||....... ...+......
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 65321110 01000 01111 1345668999999999999999999986432111 0000000000
Q ss_pred -------cCccccc---cccccCCCCH---HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 -------EGRQRLV---DPVVMATSSL---ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 -------~~~~~~~---d~~~~~~~~~---~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+.. .+........ .....+.+++.+||+.||++||+++||++.
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000 0000000000 011346789999999999999999999865
No 135
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.2e-33 Score=299.29 Aligned_cols=249 Identities=22% Similarity=0.386 Sum_probs=185.8
Q ss_pred hcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~ 553 (766)
.++|.+.+.||+|+||.||+|.. .++..||||+++... ....+.+.+|+++++++ +||||++++++|...+
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 112 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG- 112 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC-
Confidence 35688899999999999999973 235679999987543 33456789999999999 7999999999987653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
..++||||+++|+|.++++... ...+++.++..++.+++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 113 -------~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 113 -------PILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred -------ceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEE
Confidence 6899999999999999987543 23489999999999999999999987 899999999999999999999
Q ss_pred EecCCCCccccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcc
Q 004232 634 LSDYGLSIVSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 634 l~DFGla~~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~ 702 (766)
++|||+++........ . ...++.......+.++|||||||++|||+| |..|+...... .........
T Consensus 182 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--~~~~~~~~~ 259 (302)
T cd05055 182 ICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--SKFYKLIKE 259 (302)
T ss_pred ECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--HHHHHHHHc
Confidence 9999998654321110 0 011111112334567899999999999998 88887643211 111111111
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
..... .+ ... ...+.+++.+|+..+|++||++.||++.|+++
T Consensus 260 ~~~~~--~~---~~~----~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 260 GYRMA--QP---EHA----PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCcCC--CC---CCC----CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11000 00 011 12477899999999999999999999999874
No 136
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.5e-33 Score=289.40 Aligned_cols=235 Identities=23% Similarity=0.342 Sum_probs=172.8
Q ss_pred CceecCCceeEEEEEecC-------------CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 489 AIMGEGSYGKLYKGRLEN-------------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~-------------g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
+.||+|+||.||+|++.+ ...||+|.+..........+.+|+.+++.++||||++++|+|.+..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~--- 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV--- 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---
Confidence 368999999999998532 2358999887665555667888999999999999999999998653
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc----
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---- 631 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---- 631 (766)
..++||||+++|+|..++.... ..+++..+..++.||++||+|||+. +|+||||||+|||++.++.
T Consensus 78 -----~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 78 -----ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred -----CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 5699999999999998886543 3488999999999999999999987 8999999999999987654
Q ss_pred ---EEEecCCCCccccccccc-c---cCCCCC-CcccCCCCCCCEeehhHHHHHHh-cCCCccccCccchHHHHhhhhcc
Q 004232 632 ---AKLSDYGLSIVSEDINSV-G---GKQEDP-NSWEMTKLEDDVFSFGFMLLESV-AGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 632 ---~kl~DFGla~~~~~~~~~-~---~~~~~~-~~~~~~~~~~DV~SfGvil~Ell-tG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
+|++|||++......... + ...++. .....++.++|||||||++|||+ +|+.|+.......... ....
T Consensus 148 ~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~---~~~~ 224 (262)
T cd05077 148 GPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER---FYEG 224 (262)
T ss_pred CceeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH---HHhc
Confidence 899999998644221111 1 111111 11234566789999999999998 5777765322111111 1110
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
......+ . ...+.+|+.+||+.||.+||+|.+|++.+
T Consensus 225 --~~~~~~~-----~----~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 --QCMLVTP-----S----CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --CccCCCC-----C----hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0111111 1 12467899999999999999999998765
No 137
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.1e-33 Score=304.66 Aligned_cols=243 Identities=23% Similarity=0.353 Sum_probs=182.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE------ 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC------
Confidence 36888899999999999999865 68999999987542 234567889999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 75 --~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 75 --HLYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred --eEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 789999999999999999765 3478889999999999999999996 89999999999999999999999999
Q ss_pred CCccccccc------------------------------cc----cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcC
Q 004232 639 LSIVSEDIN------------------------------SV----GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAG 681 (766)
Q Consensus 639 la~~~~~~~------------------------------~~----~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG 681 (766)
++....... .. +. ..++......++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 986543221 00 00 001111123456789999999999999999
Q ss_pred CCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHH
Q 004232 682 PSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPS-FEDILWN 749 (766)
Q Consensus 682 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~~ 749 (766)
+.||..... ......+.... ....-|... ..+ ..+.+++.+|++ ||.+||+ ++|+++.
T Consensus 227 ~~Pf~~~~~--~~~~~~i~~~~--~~~~~p~~~-~~~----~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 227 FPPFYSDTL--QETYNKIINWK--ESLRFPPDP-PVS----PEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCCCCH--HHHHHHHhccC--CcccCCCCC-CCC----HHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 999874332 11122221100 011111100 011 236688899997 9999999 9999864
No 138
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-33 Score=304.14 Aligned_cols=235 Identities=25% Similarity=0.366 Sum_probs=179.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~ 555 (766)
..++|.+..+||+|+||+|+++..+ +++.+|||.+++.. ..+.+....|..|+.-+ +||.+++|++.+...
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~---- 441 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK---- 441 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccC----
Confidence 3578999999999999999999965 68899999998764 34466777788887766 599999999887765
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
+++|.||||+.|||+..+.+. ..++......+|..|+.||+|||++ +|||||||-+|||||.+|++||+
T Consensus 442 ----~~l~fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 442 ----EHLFFVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred ----CeEEEEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 389999999999996555442 2378888889999999999999998 89999999999999999999999
Q ss_pred cCCCCccccccc-cc---ccCCC----CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 636 DYGLSIVSEDIN-SV---GGKQE----DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 636 DFGla~~~~~~~-~~---~~~~~----~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|||+++...... +. .++++ +......|+..+|+|||||+||||+.|.+||.. ++..+.++++...+...
T Consensus 511 DFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g--ddEee~FdsI~~d~~~y- 587 (694)
T KOG0694|consen 511 DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG--DDEEEVFDSIVNDEVRY- 587 (694)
T ss_pred ccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC--CCHHHHHHHHhcCCCCC-
Confidence 999997543211 11 11211 111224566788999999999999999999973 33444455655443222
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
|.. .+ .+.+.|+.+.+..+|.+|--+
T Consensus 588 ---P~~---ls----~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 ---PRF---LS----KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---CCc---cc----HHHHHHHHHHhccCcccccCC
Confidence 221 12 235678889999999999544
No 139
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=7.3e-33 Score=287.85 Aligned_cols=239 Identities=21% Similarity=0.331 Sum_probs=180.3
Q ss_pred CceecCCceeEEEEEecC--C--ceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLEN--G--TSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~--g--~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|.+.+ + ..||||.+..... ...+.+.+|+.++++++||||+++++++.+ . ..+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~--------~~~ 71 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H--------PLM 71 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C--------eEE
Confidence 468999999999998643 3 3699999987655 567789999999999999999999999876 2 679
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|.+++.+... ..++|.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 72 ~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 72 MVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999999976542 4589999999999999999999997 8999999999999999999999999998654
Q ss_pred cccccc-----------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 644 EDINSV-----------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 644 ~~~~~~-----------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
...... ....++......++.++|||||||++|||+| |+.|+...... +....+.... .....+
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~--~~~~~~ 223 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKEG--ERLERP 223 (257)
T ss_pred cccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhcC--CcCCCC
Confidence 321100 0001111111245567999999999999999 99998532211 1111111111 011111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
......+.+++.+||+.+|++||++.+|+..|+
T Consensus 224 -------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 -------EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -------ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 111234778999999999999999999998875
No 140
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.8e-33 Score=289.34 Aligned_cols=244 Identities=23% Similarity=0.403 Sum_probs=183.4
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|....+..||+|.+..... ..+.+.+|++++++++|||++++++++... ..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---------~~ 75 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSEE---------PI 75 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcCC---------Cc
Confidence 45778889999999999999987777899998865432 346788999999999999999999887432 46
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++++.. ...++|..+..++.+++.||+|||+. +++||||||+||++++++.+||+|||++..
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~ 151 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARL 151 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceE
Confidence 89999999999999997543 23478999999999999999999987 899999999999999999999999999865
Q ss_pred cccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........ ...++.......+.++|||||||++|||+| |+.|+..... ......+.... ....+
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~---~~~~~- 225 (260)
T cd05069 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--REVLEQVERGY---RMPCP- 225 (260)
T ss_pred ccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCC---CCCCC-
Confidence 43211100 011111112334567899999999999999 8888764321 11111111110 00001
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
......+.+++.+||+.||.+||++++|.+.|++
T Consensus 226 ------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 ------QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ------cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1112347789999999999999999999999875
No 141
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.2e-33 Score=292.38 Aligned_cols=247 Identities=19% Similarity=0.309 Sum_probs=184.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.++|.+.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.++++++||||++++|++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-- 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC--
Confidence 356888899999999999999854 24689999986543 334567889999999999999999999988753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP-------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 627 (766)
..++||||+++|+|.+++..... ...++|..+..++.+++.||+|||+. +++||||||+||+++
T Consensus 83 ------~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~ 153 (277)
T cd05032 83 ------PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVA 153 (277)
T ss_pred ------CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEc
Confidence 67999999999999999865322 12478899999999999999999987 899999999999999
Q ss_pred CCCcEEEecCCCCcccccccc--c--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 628 EHRIAKLSDYGLSIVSEDINS--V--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 628 ~~~~~kl~DFGla~~~~~~~~--~--------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
+++.+||+|||+++....... . ....++.......+.++|||||||++||++| |..|+..... ....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~ 231 (277)
T cd05032 154 EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVL 231 (277)
T ss_pred CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHH
Confidence 999999999999864322110 0 0011111112345678999999999999998 8888753322 1111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
..+. ........+ .. ...+.+++.+||+.+|++|||+.|++..|+
T Consensus 232 ~~~~-~~~~~~~~~-----~~----~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 232 KFVI-DGGHLDLPE-----NC----PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHh-cCCCCCCCC-----CC----CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1111 111111111 11 234779999999999999999999999886
No 142
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.8e-33 Score=293.96 Aligned_cols=250 Identities=20% Similarity=0.356 Sum_probs=183.5
Q ss_pred CCCcCCceecCCceeEEEEEe-----cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.|++.+.||+|+||.||++++ .++..||+|.++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 80 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG---- 80 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC----
Confidence 367788999999999999974 357889999987543 3445679999999999999999999999876531
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||+++|+|.+++.+.. ..++|..+..++.+++.||+|||+. +++||||||+||+++.++.+||+||
T Consensus 81 --~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~df 153 (284)
T cd05079 81 --NGIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDF 153 (284)
T ss_pred --CceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCC
Confidence 25799999999999999986542 2489999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc-------ccc----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc------------hHH
Q 004232 638 GLSIVSEDINS-------VGG----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF------------LQE 694 (766)
Q Consensus 638 Gla~~~~~~~~-------~~~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~------------~~~ 694 (766)
|++........ ... ..++......++.++|||||||++|||+|++.|....... ...
T Consensus 154 g~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd05079 154 GLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVT 233 (284)
T ss_pred ccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHH
Confidence 99865432111 000 0011111133556899999999999999987654211100 000
Q ss_pred HHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 695 ELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 695 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.............. .......+.+++.+||+.+|++||++.+|++.++++
T Consensus 234 ~~~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 234 RLVRVLEEGKRLPR---------PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHcCccCCC---------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000000100000 011223578999999999999999999999999875
No 143
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=9.1e-33 Score=297.43 Aligned_cols=233 Identities=21% Similarity=0.359 Sum_probs=173.3
Q ss_pred CceecCCceeEEEEEe----cCCceEEEEEccCCh----hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 489 AIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.||+|+||.||+++. .+++.||||.++... ......+..|+.+|++++||||+++++++.+.+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-------- 73 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-------- 73 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC--------
Confidence 5799999999999974 357899999987532 223456788999999999999999999987753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+.. .+.+.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 74 KLYLILEYLSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred eEEEEEeCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 6899999999999999987543 367788888999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
+........ + +..++.......+.++|||||||++|||++|+.||..... ......+... ...+ .
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--~~~~~~~~~~--~~~~-~-- 220 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--KKTIDKILKG--KLNL-P-- 220 (323)
T ss_pred eecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--HHHHHHHHcC--CCCC-C--
Confidence 643211110 0 1111111223345689999999999999999999864332 1112222111 1111 0
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
...+ ..+.+++.+|++.||++|| ++.+++.
T Consensus 221 --~~~~----~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 --PYLT----PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --CCCC----HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 1111 2367899999999999999 7777755
No 144
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3e-33 Score=302.20 Aligned_cols=243 Identities=18% Similarity=0.282 Sum_probs=181.2
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+++. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~------ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD------ 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC------
Confidence 3688899999999999999985 468999999997543 234567889999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 75 --~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 75 --NLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred --eEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 6899999999999999997652 2488889999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc------cc---CCCCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc
Q 004232 639 LSIVSEDINSV------GG---KQEDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 639 la~~~~~~~~~------~~---~~~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
++......... +. ..++... ...++.++|||||||++|||++|+.||..... ...+..+....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--~~~~~~i~~~~ 225 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS--AKTYNNIMNFQ 225 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH--HHHHHHHHcCC
Confidence 98654321110 10 1111000 22345789999999999999999999864322 12222222111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+.+. ... ...+.+++.+|++ +|++||++.++++
T Consensus 226 ~~~~~~~~---~~~----~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 226 RFLKFPED---PKV----SSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CccCCCCC---CCC----CHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11111111 011 1236678889997 9999999999875
No 145
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.4e-32 Score=288.06 Aligned_cols=247 Identities=21% Similarity=0.371 Sum_probs=186.3
Q ss_pred cCCCcCCceecCCceeEEEEEecC----CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|.+.+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||++++++|.+.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN------ 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC------
Confidence 347778899999999999998643 3468999886554 44567899999999999999999999988753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++||
T Consensus 80 ---~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~ 151 (270)
T cd05056 80 ---PVWIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDF 151 (270)
T ss_pred ---CcEEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccC
Confidence 4689999999999999997543 2489999999999999999999987 8999999999999999999999999
Q ss_pred CCCccccccccc---------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccc
Q 004232 638 GLSIVSEDINSV---------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 638 Gla~~~~~~~~~---------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|+++........ .+..++......++.++|||||||++||+++ |..||..... .+....+.... .
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~~~---~ 226 (270)
T cd05056 152 GLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIENGE---R 226 (270)
T ss_pred ceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcCC---c
Confidence 998654322110 0111111122345668999999999999996 9999864322 11122221111 1
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
...+ .. ....+.+++.+|+..+|++||++.++++.|++...
T Consensus 227 ~~~~---~~----~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 227 LPMP---PN----CPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCCC---CC----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111 11 12347789999999999999999999999998754
No 146
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.7e-33 Score=294.24 Aligned_cols=257 Identities=18% Similarity=0.247 Sum_probs=175.5
Q ss_pred CCCcCCceecCCceeEEEEEe--cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhC---CCCCcccccceeecCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l---~Hpniv~l~g~~~~~~~~~~ 556 (766)
+|++.+.||+|+||.||+|+. .++..||||.++... ......+.+|+.+++.+ +||||++++++|......
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~-- 79 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD-- 79 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC--
Confidence 588889999999999999985 247889999886432 22234556677776665 699999999998643211
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
.....++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 80 -~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 80 -RETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred -CCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcc
Confidence 1135899999997 58998886543 23488999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhc---c-cC
Q 004232 637 YGLSIVSEDINSVG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNS---Q-EG 704 (766)
Q Consensus 637 FGla~~~~~~~~~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~---~-~~ 704 (766)
||+++......... +..++......++.++|||||||++|||++|+.||...... ....+..... . +.
T Consensus 154 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 154 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred ccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 99986543221110 01111111234566899999999999999999998743321 1111111000 0 00
Q ss_pred ccc--ccccccc--CCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 705 RQR--LVDPVVM--ATSSL-----ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 705 ~~~--~~d~~~~--~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... +...... ..... .....+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 0000000 00000 01123578999999999999999999975
No 147
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.3e-33 Score=305.93 Aligned_cols=243 Identities=21% Similarity=0.294 Sum_probs=176.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+++. .+++.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~------ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ------ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 3688889999999999999985 478999999986532 233567888999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..|+||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 75 --YLYLIMEFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred --eeEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 7899999999999999987543 477888888999999999999997 89999999999999999999999999
Q ss_pred CCccccccc----------------------------------------------------cccc---CCCCCCcccCCC
Q 004232 639 LSIVSEDIN----------------------------------------------------SVGG---KQEDPNSWEMTK 663 (766)
Q Consensus 639 la~~~~~~~----------------------------------------------------~~~~---~~~~~~~~~~~~ 663 (766)
+++...... ..++ ..++......++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 985321100 0000 000001112345
Q ss_pred CCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCC---
Q 004232 664 LEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSR--- 740 (766)
Q Consensus 664 ~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~R--- 740 (766)
.++|||||||++|||+||+.||..... ...+..+........+.+.. ..+ ..+.+++.+|++ +|.+|
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~~~~~~~~p~~~---~~s----~~~~dli~~lL~-~~~~r~~r 296 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENS--HETYRKIINWRETLYFPDDI---HLS----VEAEDLIRRLIT-NAENRLGR 296 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCH--HHHHHHHHccCCccCCCCCC---CCC----HHHHHHHHHHhc-CHhhcCCC
Confidence 689999999999999999999864332 11122221111111111110 011 236688889997 66665
Q ss_pred CCHHHHHHH
Q 004232 741 PSFEDILWN 749 (766)
Q Consensus 741 Ps~~ev~~~ 749 (766)
|++.|+++.
T Consensus 297 ~~~~~~l~h 305 (377)
T cd05629 297 GGAHEIKSH 305 (377)
T ss_pred CCHHHHhcC
Confidence 699988765
No 148
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.4e-33 Score=301.29 Aligned_cols=230 Identities=25% Similarity=0.364 Sum_probs=172.2
Q ss_pred CceecCCceeEEEEEe----cCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 489 AIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+.||+|+||.||+++. .+|+.||+|+++.... .....+.+|++++++++||||+++++++.+.+ ..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------~~ 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG--------KL 73 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--------EE
Confidence 5799999999999874 3689999999875432 23456778999999999999999999988753 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
|+||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 74 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 74 YLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999999986543 488999999999999999999997 899999999999999999999999999865
Q ss_pred ccccccc----ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 643 SEDINSV----GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 643 ~~~~~~~----~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
....... .++ .++.......+.++|||||||++|||+||+.|+..... ......+.... ..+ |
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~i~~~~--~~~--p--- 218 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--KETMTMILKAK--LGM--P--- 218 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--HHHHHHHHcCC--CCC--C---
Confidence 4322110 001 11111123456789999999999999999999864322 11122221110 111 0
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFED 745 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~e 745 (766)
...+ ..+.+++.+||+.||.+||++.+
T Consensus 219 ~~~~----~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLS----PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCC----HHHHHHHHHHhhcCHhHcCCCCC
Confidence 1111 23668899999999999999655
No 149
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=7.4e-33 Score=321.39 Aligned_cols=254 Identities=18% Similarity=0.272 Sum_probs=185.5
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|++++++++||||+++++++.+.+
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~------ 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD------ 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC------
Confidence 57888999999999999999854 68999999986532 233567899999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENT--------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
..++||||+++|+|.+++.... .....++...+.++.+|++||+|||+. +|+||||||+||+++.++
T Consensus 76 --~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 76 --PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFG 150 (932)
T ss_pred --EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCC
Confidence 6899999999999999886421 112356778889999999999999997 899999999999999999
Q ss_pred cEEEecCCCCcccccccc-----------------------ccc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCc
Q 004232 631 IAKLSDYGLSIVSEDINS-----------------------VGG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSV 684 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~-----------------------~~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p 684 (766)
.+||+|||+++....... .+. ..++.......+.++|||||||++|||+||+.|
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 999999999965411000 000 000101112345678999999999999999999
Q ss_pred cccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHHhhc
Q 004232 685 AARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP-SFEDILWNLQYAAQVQ 757 (766)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~~~~~~ 757 (766)
+............ .+.+|..... ..+....+.+++.+|++.||++|| +++++.+.|+...+..
T Consensus 231 F~~~~~~ki~~~~---------~i~~P~~~~p-~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~ 294 (932)
T PRK13184 231 YRRKKGRKISYRD---------VILSPIEVAP-YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGS 294 (932)
T ss_pred CCCcchhhhhhhh---------hccChhhccc-cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcC
Confidence 8643221111000 1111110000 001123367889999999999995 6788888888876643
No 150
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1e-32 Score=288.90 Aligned_cols=243 Identities=19% Similarity=0.285 Sum_probs=172.9
Q ss_pred ceecCCceeEEEEEecC---CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEE
Q 004232 490 IMGEGSYGKLYKGRLEN---GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~~~---g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
.||+|+||.||+|+..+ ...+|+|.+.... ......+.+|+.+++.++||||++++|+|.+.+ ..++|
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~--------~~~lv 73 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI--------PYLLV 73 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC--------ceEEE
Confidence 58999999999997543 4568888775432 334567889999999999999999999988653 68999
Q ss_pred EEccCCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 566 YEFMSNGNFRTHISENTP--GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
|||+++|+|.+++.+... ....++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 74 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 150 (269)
T cd05042 74 LEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQ 150 (269)
T ss_pred EEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccccccc
Confidence 999999999999976432 12346778889999999999999997 8999999999999999999999999998542
Q ss_pred cccc---ccccC-----CCCCCc---------ccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 644 EDIN---SVGGK-----QEDPNS---------WEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 644 ~~~~---~~~~~-----~~~~~~---------~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
.... ..... ...|.. ....+.++|||||||++|||++ |..|+..... .+....... ...
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~-~~~ 227 (269)
T cd05042 151 YPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--EQVLKQVVR-EQD 227 (269)
T ss_pred ccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhh-ccC
Confidence 2110 00000 001110 1234558999999999999999 6777753321 111111111 112
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.++.++......+ ..+.+++..|| .||++||+++||.+.|.
T Consensus 228 ~~~~~~~~~~~~~----~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 IKLPKPQLDLKYS----DRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ccCCCCcccccCC----HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2223332222222 23456778898 59999999999998874
No 151
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.3e-33 Score=293.15 Aligned_cols=248 Identities=23% Similarity=0.380 Sum_probs=184.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.++|+..+.||+|+||.||+|+.. ++..||+|.+.... ....+++.+|+.++++++||||++++++|.+.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~-- 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK-- 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC--
Confidence 467888999999999999999853 46789999987543 334567999999999999999999999988753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP-------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFF 615 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 615 (766)
..++||||+++|+|.+++.+... ...+++..++.++.+++.||+|||+. +++
T Consensus 82 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~ 152 (288)
T cd05050 82 ------PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFV 152 (288)
T ss_pred ------ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 57999999999999999874321 12477888999999999999999987 899
Q ss_pred cCCCCCCceEEcCCCcEEEecCCCCccccccccc----c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCc
Q 004232 616 NNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV----G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSV 684 (766)
Q Consensus 616 Hrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~----~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p 684 (766)
||||||+||++++++.+||+|||++......... . +..++......++.++|||||||++|||++ |..|
T Consensus 153 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p 232 (288)
T cd05050 153 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232 (288)
T ss_pred cccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999998643211100 0 001111112345668999999999999998 7777
Q ss_pred cccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 685 AARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
+..... .+....+. ....... + ......+.+++.+||+.+|++||++.||++.|+.
T Consensus 233 ~~~~~~--~~~~~~~~-~~~~~~~--~-------~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 233 YYGMAH--EEVIYYVR-DGNVLSC--P-------DNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCCH--HHHHHHHh-cCCCCCC--C-------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 643221 12111111 1111110 0 0112347889999999999999999999999873
No 152
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-33 Score=295.26 Aligned_cols=247 Identities=17% Similarity=0.257 Sum_probs=184.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||+||+++.. +|..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------- 76 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-------- 76 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC--------
Confidence 45777889999999999999854 68899999876543 334578899999999999999999999998763
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|..++.+.. .+++.....++.+++.|+.|||+.. +++||||||+||++++++.++|+|||++
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 77 NICMCMEFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEEEEecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 7899999999999999887643 4789999999999999999999742 7999999999999999999999999998
Q ss_pred cccccccc---ccc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc---------hHHHHhhhhcccCc
Q 004232 641 IVSEDINS---VGG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF---------LQEELDSLNSQEGR 705 (766)
Q Consensus 641 ~~~~~~~~---~~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~---------~~~~~~~~~~~~~~ 705 (766)
........ .+. ..++.......+.++|||||||++||++||+.|+...... ....+..+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 229 (284)
T cd06620 152 GELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-- 229 (284)
T ss_pred cchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--
Confidence 54321111 001 1111111234566899999999999999999998643211 011111111100
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.+.. ...+....+.+++.+||+.||++||++.||+++..
T Consensus 230 ----~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 230 ----PPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred ----CCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0111 01112234788999999999999999999998743
No 153
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-32 Score=294.73 Aligned_cols=255 Identities=18% Similarity=0.207 Sum_probs=182.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+++.. ++..+|+|.++.. .....+++.+|++++++++||||++++++|.+.+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-------- 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC--------
Confidence 36888999999999999999854 6888999988654 2334567889999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++++.. .+++.....++.++++||.|||+.+ +++||||||+||++++++.+||+|||++
T Consensus 73 ~~~lv~ey~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 73 EISICMEHMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEEEEeeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence 7899999999999999997643 4788889999999999999999742 7999999999999999999999999998
Q ss_pred ccccccccc------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHH-HHhhhhcccCcc-------
Q 004232 641 IVSEDINSV------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQE-ELDSLNSQEGRQ------- 706 (766)
Q Consensus 641 ~~~~~~~~~------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~-~~~~~~~~~~~~------- 706 (766)
......... ....++......++.++|||||||++|||+||+.|+......... .+..........
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 148 GQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred ccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccccc
Confidence 654221110 011111111233556899999999999999999998532211111 010000000000
Q ss_pred --c---------------cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 707 --R---------------LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 707 --~---------------~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
. +........+.......+.+++.+||..+|++||++.||++.-
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 0000000000000122477999999999999999999998773
No 154
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-32 Score=295.16 Aligned_cols=251 Identities=20% Similarity=0.392 Sum_probs=186.5
Q ss_pred hcCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
.++|.+.+.||+|+||.||+|+.. ....||+|.++... .....++..|+++++++ +||||++++++|.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 356778899999999999999731 24579999987542 34456788999999999 699999999998765
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
+ ..++||||+++|+|.+++.+..+ ...++|.+...++.|++.||+|||++ +++|||
T Consensus 91 ~--------~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~d 159 (314)
T cd05099 91 G--------PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRD 159 (314)
T ss_pred C--------ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecc
Confidence 3 68999999999999999975421 23488999999999999999999987 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCcccccccccc----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCcccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVSEDINSVG----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAAR 687 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~ 687 (766)
|||+||++++++.+||+|||+++......... +..++......++.++|||||||++|||++ |..|+..
T Consensus 160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 160 LAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred ccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999996543211100 011111112345668999999999999999 7888753
Q ss_pred CccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 688 KGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
... ......+. ........ .. ....+.+++.+||..+|++||++.|+++.|+++..
T Consensus 240 ~~~--~~~~~~~~-~~~~~~~~-----~~----~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 240 IPV--EELFKLLR-EGHRMDKP-----SN----CTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred CCH--HHHHHHHH-cCCCCCCC-----CC----CCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 221 11111111 11111110 11 11246789999999999999999999999998764
No 155
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-32 Score=291.26 Aligned_cols=244 Identities=17% Similarity=0.235 Sum_probs=179.6
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.|+..+.||+|+||.||++.. .+++.||||++..... .....+.+|+.++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD------- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-------
Confidence 367788999999999999985 4689999999865322 22355778999999999999999999887653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|..++.... ...+++.....++.|++.|++|||+. +++||||||+||++++++.+||+|||+
T Consensus 74 -~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 74 -ALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred -eEEEEEeccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 6899999999999998886532 23488999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~d~ 711 (766)
+......... + ...++.......+.++|||||||++|||++|+.||....... ...+...... ....+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~--- 224 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE-DQEEY--- 224 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh-ccccc---
Confidence 8654322111 0 011111112334567899999999999999999987432211 1111111100 00000
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
.......+.+++.+||+.||.+|| +++++.+.
T Consensus 225 ------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 225 ------SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ------CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 011122367899999999999999 77787553
No 156
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=4.8e-33 Score=304.95 Aligned_cols=245 Identities=18% Similarity=0.252 Sum_probs=181.0
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
..++|++.+.||+|+||.||+++.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~---- 116 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK---- 116 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC----
Confidence 4567899999999999999999854 68899999986432 233456788999999999999999999887653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++... .++......++.+++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 117 ----~~~lv~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 117 ----YLYMVMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred ----EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 789999999999999988653 266777888899999999999997 899999999999999999999999
Q ss_pred CCCCcccccccc-----cccCCC--CCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc
Q 004232 637 YGLSIVSEDINS-----VGGKQE--DPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 637 FGla~~~~~~~~-----~~~~~~--~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
||++........ ..++.. .|.. ...++.++|||||||++|||+||+.||..... ...+..+....
T Consensus 186 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~~ 263 (370)
T cd05596 186 FGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKIMDHK 263 (370)
T ss_pred ccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--HHHHHHHHcCC
Confidence 999865432111 001110 1110 11245689999999999999999999874332 12222222111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWS--RPSFEDILWN 749 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~ 749 (766)
....+.+. . ..+ ..+.+++.+|++.+|.+ ||++.|+++.
T Consensus 264 ~~~~~~~~--~-~~s----~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 264 NSLTFPDD--I-EIS----KQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CcCCCCCc--C-CCC----HHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11111111 0 111 23678899999999988 9999999754
No 157
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=5.3e-33 Score=299.58 Aligned_cols=235 Identities=19% Similarity=0.258 Sum_probs=174.2
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
+.||+|+||.||+++. .+|..||+|.++... ......+..|+++++.++||||+++++++.+.+ ..++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~--------~~~l 72 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD--------RLCF 72 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC--------EEEE
Confidence 3689999999999985 478999999987532 233456778999999999999999999887653 7899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
||||+++|+|..++.+.. .+++.....++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+++...
T Consensus 73 v~E~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~ 147 (325)
T cd05594 73 VMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 147 (325)
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecC
Confidence 999999999998886543 488999999999999999999973 189999999999999999999999999986432
Q ss_pred ccc-cc----cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 645 DIN-SV----GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 645 ~~~-~~----~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
... .. +. ..++......++.++|||||||++|||+||+.||...... .....+.... ..+ | ..
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~~~~--~~~--p---~~ 218 (325)
T cd05594 148 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE--IRF--P---RT 218 (325)
T ss_pred CCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHhcCC--CCC--C---CC
Confidence 111 10 10 1111111234567899999999999999999998643221 1111111100 011 1 11
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
.. ..+.+++.+|++.||++|| ++.++++.
T Consensus 219 ~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 219 LS----PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CC----HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11 2367889999999999996 88888754
No 158
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8.1e-33 Score=290.09 Aligned_cols=251 Identities=21% Similarity=0.341 Sum_probs=183.3
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.+++.|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+.+++++ +||||++++|+|...... .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~--~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP--G 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC--C
Confidence 35677888899999999999999854 68899999986543 2345788899999998 699999999998764311 0
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++||||+++|+|.+++.... ...++|.....++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccC
Confidence 1136899999999999999987543 23588999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-----c---cCCCCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 638 GLSIVSEDINSV-----G---GKQEDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 638 Gla~~~~~~~~~-----~---~~~~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
|++......... + +..++... ...++.++|||||||++|||++|+.|+...... ........ ..
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~--~~~~~~~~-~~ 232 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--RALFLIPR-NP 232 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH--HHHHHHhc-CC
Confidence 998654322111 0 11111100 123456799999999999999999998632211 11111111 10
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.....+. .. ...+.+++.+||..+|.+||++.||++
T Consensus 233 ~~~~~~~----~~----~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 233 APRLKSK----KW----SKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCCCCC----Cc----CHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1111111 11 124678999999999999999999975
No 159
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.2e-32 Score=288.17 Aligned_cols=247 Identities=22% Similarity=0.382 Sum_probs=186.1
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCc----eEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGT----SVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|++.+.||+|+||.||+|... +|. .||+|.++... .....++.+|+.++++++||||++++|+|...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSS----- 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence 45777899999999999999854 333 58999887553 34457789999999999999999999998762
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.+... .+++.....++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 82 ----~~~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 82 ----QVQLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred ----ceEEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 57999999999999999976432 388999999999999999999996 899999999999999999999999
Q ss_pred CCCCccccccccc----c------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV----G------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~----~------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ . +..++......++.++|||||||++||++| |+.|+..... .+....+.. .
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~-~-- 227 (279)
T cd05057 153 FGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEK-G-- 227 (279)
T ss_pred CcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhC-C--
Confidence 9998654322110 0 000111111344568999999999999999 9999864321 111111111 1
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.....+.. .+ ..+.+++.+||..+|.+||++.++++.|..+.+
T Consensus 228 ~~~~~~~~---~~----~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 228 ERLPQPPI---CT----IDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCC---CC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11111111 11 236788999999999999999999999998764
No 160
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-32 Score=285.63 Aligned_cols=233 Identities=24% Similarity=0.357 Sum_probs=172.6
Q ss_pred CceecCCceeEEEEEecC-C----------ceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 489 AIMGEGSYGKLYKGRLEN-G----------TSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~-g----------~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+.||+|+||.||+|...+ + ..|++|.+...... .+.+.+|+.++++++||||++++|+|.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~----- 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D----- 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-C-----
Confidence 468999999999999753 3 25788877654433 6788999999999999999999999876 3
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-------
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR------- 630 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~------- 630 (766)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 74 ---~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ---ENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred ---CcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 46899999999999999976432 488999999999999999999987 899999999999999887
Q ss_pred cEEEecCCCCccccccccc----ccCCCCCCccc--CCCCCCCEeehhHHHHHHhcC-CCccccCccchHHHHhhhhccc
Q 004232 631 IAKLSDYGLSIVSEDINSV----GGKQEDPNSWE--MTKLEDDVFSFGFMLLESVAG-PSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~----~~~~~~~~~~~--~~~~~~DV~SfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
.+|++|||++......... ....++..... .++.++|||||||++|||++| ..|+..... ........ .
T Consensus 146 ~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~~~~-~- 221 (259)
T cd05037 146 FIKLSDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKERFYQ-D- 221 (259)
T ss_pred eEEeCCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHHHHh-c-
Confidence 7999999998654321111 11111111112 456689999999999999995 666543211 11111110 0
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
......+ . ...+.+++.+||+.+|.+||++.||++.|
T Consensus 222 -~~~~~~~------~---~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 222 -QHRLPMP------D---CAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -CCCCCCC------C---chHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0011111 0 14578999999999999999999999876
No 161
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.7e-32 Score=284.28 Aligned_cols=245 Identities=20% Similarity=0.384 Sum_probs=185.3
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.+. .
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------~ 74 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE---------P 74 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCC---------C
Confidence 35688889999999999999998778889999887543 3456788999999999999999999987652 5
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.+++|||+++|+|.+++.+.. ...+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~ 150 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLAR 150 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCccee
Confidence 799999999999999997643 24578999999999999999999986 89999999999999999999999999986
Q ss_pred ccccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
......... ...++.......+.++|||||||++||++| |+.|+...... .....+. ....... +
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~-~~~~~~~--~ 225 (260)
T cd05073 151 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALE-RGYRMPR--P 225 (260)
T ss_pred eccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHh-CCCCCCC--c
Confidence 543211110 011111112335668999999999999999 88888643221 1111111 1101000 0
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
. .....+.+++.+||+.+|++||++.++.+.|+.
T Consensus 226 ---~----~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 226 ---E----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---c----cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1 112347789999999999999999999999874
No 162
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1e-32 Score=294.27 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=182.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCc----eEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGT----SVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|+..+.||+|+||.||+|+.. +|. .||+|.+.... .....++.+|+.++++++||||++++|+|...
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~----- 81 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP----- 81 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-----
Confidence 45677789999999999999853 444 47899886543 23345788999999999999999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++++||+++|+|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 82 ----~~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~D 152 (303)
T cd05110 82 ----TIQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITD 152 (303)
T ss_pred ----CceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcc
Confidence 3579999999999999987543 2478899999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc----cc------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV----GG------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~----~~------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ .. ..++.......+.++|||||||++|||+| |+.|+....... .........
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~---~~~~~~~~~- 228 (303)
T cd05110 153 FGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE---IPDLLEKGE- 228 (303)
T ss_pred ccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHCCC-
Confidence 9999754321110 00 00111112334567899999999999998 888875432111 111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
....+. .. ...+.+++.+||..+|++||+|+++++.|+++..
T Consensus 229 -~~~~~~---~~----~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 229 -RLPQPP---IC----TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred -CCCCCC---CC----CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111111 11 1246788999999999999999999999998754
No 163
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.3e-32 Score=296.51 Aligned_cols=231 Identities=23% Similarity=0.343 Sum_probs=169.7
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHH---HhCCCCCcccccceeecCCCCCCc
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLL---AKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l---~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+.++ ++++||||+++++++.+.+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~----- 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED----- 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-----
Confidence 566789999999999999854 68999999997542 22345566666554 5678999999999987653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..|+||||+++|+|..++++. .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 76 ---~~~lv~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 ---HVCFVMEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred ---EEEEEEcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 789999999999999887642 489999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|+++........ + +..++......++.++|||||||++|||++|+.||..... ......+..... ..
T Consensus 146 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~~~--~~- 220 (324)
T cd05589 146 GLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--EEVFDSIVNDEV--RY- 220 (324)
T ss_pred cCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC--CC-
Confidence 998643211110 0 1111111123456689999999999999999999864322 122222211110 00
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
| ...+ ..+.+++.+|++.||.+||++
T Consensus 221 -p---~~~~----~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 221 -P---RFLS----REAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred -C---CCCC----HHHHHHHHHHhhcCHhHcCCC
Confidence 1 1111 236789999999999999953
No 164
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-32 Score=284.34 Aligned_cols=259 Identities=17% Similarity=0.327 Sum_probs=183.9
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHH--hCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLA--KLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~--~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
..++.++||+|+||.||||++. ++.||||+++.. ..+.|..|-+|.+ .++|+||++++++-....+. ..+
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~----~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD----RME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc----ccc
Confidence 3455678999999999999986 489999999654 3456777777665 46899999999875443321 247
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC------CCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG------VIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
++||+||.++|+|.+||..+ .++|....+++..+++||+|||+. ..|+|+|||||++|||+..|+++.|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 89999999999999999865 489999999999999999999984 34789999999999999999999999
Q ss_pred cCCCCcccccccccccCC--CCCCcccCC-------C-------CCCCEeehhHHHHHHhcCCCccc-----c-Cc----
Q 004232 636 DYGLSIVSEDINSVGGKQ--EDPNSWEMT-------K-------LEDDVFSFGFMLLESVAGPSVAA-----R-KG---- 689 (766)
Q Consensus 636 DFGla~~~~~~~~~~~~~--~~~~~~~~~-------~-------~~~DV~SfGvil~ElltG~~p~~-----~-~~---- 689 (766)
|||+|.........+... -...+++.+ . .+.||||+|.|||||++.-...+ . .-
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 999997654322211110 000111111 1 13699999999999998632221 0 00
Q ss_pred ----cchHHHHhhhh-cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 690 ----QFLQEELDSLN-SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 690 ----~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
.-..+.+...+ ....+..+.|.-. .. ..+..+.+.+..||..||+.|-|+.=|.+++.++....+
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~-~h---~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWR-KH---AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhh-cC---ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 01112222222 2222333333211 11 345567889999999999999999999999988876544
No 165
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=9e-33 Score=298.10 Aligned_cols=231 Identities=19% Similarity=0.277 Sum_probs=168.9
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +++.||+|.++... ....+.+.+|+.++.++ +||||+++++++.+.+ ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~--------~~~ 72 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES--------RLF 72 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC--------EEE
Confidence 46999999999999854 68899999987542 23445677888888877 7999999999987753 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~E~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 73 FVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 9999999999998886543 488999999999999999999997 8999999999999999999999999998643
Q ss_pred ccccc----c-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc------chHHHHhhhhcccCccccc
Q 004232 644 EDINS----V-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ------FLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 644 ~~~~~----~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~------~~~~~~~~~~~~~~~~~~~ 709 (766)
..... . + +..++......++.++|||||||++|||+||+.||..... ............. ...+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p 225 (329)
T cd05618 147 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIP 225 (329)
T ss_pred cCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC-CCCCC
Confidence 21110 0 0 1111111123456689999999999999999999852110 1111111111111 11111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
... ...+.+++.+|++.||++||+.
T Consensus 226 -----~~~----~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 226 -----RSL----SVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -----CCC----CHHHHHHHHHHhcCCHHHcCCC
Confidence 111 1236789999999999999983
No 166
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.8e-32 Score=285.63 Aligned_cols=243 Identities=17% Similarity=0.258 Sum_probs=172.1
Q ss_pred ceecCCceeEEEEEecCC---ceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEE
Q 004232 490 IMGEGSYGKLYKGRLENG---TSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~~~g---~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+.+++.++||||++++|+|.+.. ..++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~--------~~~lv 73 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI--------PYLLV 73 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC--------ccEEE
Confidence 589999999999975433 345677665433 344678999999999999999999999998653 67999
Q ss_pred EEccCCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 566 YEFMSNGNFRTHISENTP-GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
|||+++|+|.+++++... ....++.....++.+|++||+|||+. +++||||||+|||++.++.+||+|||++....
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 74 FEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred EecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 999999999999976432 23356667788999999999999987 89999999999999999999999999975321
Q ss_pred ccc--c-----c---ccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcC-CCccccCccchHHHHhhhhcccCcc
Q 004232 645 DIN--S-----V---GGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAG-PSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 645 ~~~--~-----~---~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
... . . ....++.. .....+.++|||||||++|||+++ ..|+..... .+.+..+.. +...
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~~~~~-~~~~ 227 (268)
T cd05086 151 KEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--REVLNHVIK-DQQV 227 (268)
T ss_pred cchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHh-hccc
Confidence 110 0 0 00111100 001234578999999999999975 566653221 222222211 2223
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.+.+|.+..... ..+.+++..|| .+|++||+|+||++.|.
T Consensus 228 ~~~~~~~~~~~~----~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 228 KLFKPQLELPYS----ERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccCCCccCCCCc----HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 344444333322 23566788999 67999999999998874
No 167
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.2e-32 Score=294.18 Aligned_cols=234 Identities=21% Similarity=0.291 Sum_probs=173.1
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +++.||||+++... ....+.+..|.+++..+ +||||+++++++.+.+ ..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~--------~~~ 72 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD--------RLF 72 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--------eEE
Confidence 36899999999999864 58899999987532 23345677788888866 7999999999988753 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 73 lv~E~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 73 FVMEYVNGGDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999998887543 478889999999999999999997 8999999999999999999999999998643
Q ss_pred cccccc-----cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINSV-----GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~~-----~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
...... +. ..++......++.++|||||||++|||+||+.||..... ......+.... ...|..
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--~~~~~~i~~~~----~~~p~~-- 218 (321)
T cd05591 147 ILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--DDLFESILHDD----VLYPVW-- 218 (321)
T ss_pred ccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--HHHHHHHHcCC----CCCCCC--
Confidence 211110 00 111111123456789999999999999999999874332 22222222111 111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCC-------CHHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRP-------SFEDILWN 749 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RP-------s~~ev~~~ 749 (766)
.+ ..+.+++.+|++.||++|| ++.++++.
T Consensus 219 -~~----~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 219 -LS----KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -CC----HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 11 2367889999999999999 66666543
No 168
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.8e-32 Score=288.97 Aligned_cols=236 Identities=17% Similarity=0.221 Sum_probs=172.2
Q ss_pred eecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||+||+++.. +|+.||||++..... ...+.+..|++++++++||||+++.+++.+.. ..++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~--------~~~lv~ 72 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT--------DLCLVM 72 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC--------eEEEEE
Confidence 699999999999854 789999999865322 23356778999999999999999998887653 689999
Q ss_pred EccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccc
Q 004232 567 EFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSED 645 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~ 645 (766)
||+++|+|..++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 73 e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 73 TIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKD 149 (280)
T ss_pred eCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence 9999999998875422 234588999999999999999999997 899999999999999999999999999865432
Q ss_pred cccc----c----cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HH-HhhhhcccCccccccccccC
Q 004232 646 INSV----G----GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EE-LDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 646 ~~~~----~----~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~-~~~~~~~~~~~~~~d~~~~~ 715 (766)
.... . +..++......++.++|||||||++|||++|+.||........ .. ...+.. . ... ...
T Consensus 150 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~-~~~-----~~~ 222 (280)
T cd05608 150 GQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN-D-SVT-----YPD 222 (280)
T ss_pred CCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc-c-CCC-----Ccc
Confidence 1111 0 1111111123456689999999999999999999864332111 11 111100 0 000 001
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
.....+.+++.+|++.||++|| +++|+++
T Consensus 223 ----~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 223 ----KFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred ----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 1123367889999999999999 5566664
No 169
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.1e-32 Score=301.75 Aligned_cols=247 Identities=18% Similarity=0.275 Sum_probs=180.0
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
....++|++.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-- 116 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK-- 116 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC--
Confidence 334578999999999999999999864 68899999986432 233456788999999999999999999887653
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++|+|.+++... .++......++.+++.||+|||+. +|+||||||+|||+++++.+||
T Consensus 117 ------~~~lv~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL 183 (370)
T cd05621 117 ------YLYMVMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKL 183 (370)
T ss_pred ------EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEE
Confidence 789999999999999998643 267888889999999999999997 8999999999999999999999
Q ss_pred ecCCCCcccccccc-----cccCCC--CCCcc------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc
Q 004232 635 SDYGLSIVSEDINS-----VGGKQE--DPNSW------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS 701 (766)
Q Consensus 635 ~DFGla~~~~~~~~-----~~~~~~--~~~~~------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (766)
+|||++........ ..++.. .|... ...+.++||||+||++|||+||+.||..... ......+..
T Consensus 184 ~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~--~~~~~~i~~ 261 (370)
T cd05621 184 ADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL--VGTYSKIMD 261 (370)
T ss_pred EecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH--HHHHHHHHh
Confidence 99999875432211 001110 11100 1245689999999999999999999864322 222222221
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWS--RPSFEDILWN 749 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~ 749 (766)
......+.+. ......+.+++.+|+..++.+ ||++.|+++.
T Consensus 262 ~~~~~~~p~~-------~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 262 HKNSLNFPED-------VEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcccCCCCc-------ccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 1111111111 011123567778888755543 8899998775
No 170
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.7e-33 Score=288.08 Aligned_cols=235 Identities=27% Similarity=0.413 Sum_probs=172.9
Q ss_pred CceecCCceeEEEEEecC--------CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 489 AIMGEGSYGKLYKGRLEN--------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++..++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-------- 72 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-------- 72 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC--------
Confidence 368999999999997532 3358888887655555678889999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc--------E
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--------A 632 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--------~ 632 (766)
..++||||+++|+|..+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +
T Consensus 73 ~~~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 73 ESIMVQEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred CcEEEEecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 57999999999999999976532 478999999999999999999987 8999999999999987765 6
Q ss_pred EEecCCCCcccccccccccCC--CCCCcc---cCCCCCCCEeehhHHHHHHhcCC-CccccCccchHHHHhhhhcccCcc
Q 004232 633 KLSDYGLSIVSEDINSVGGKQ--EDPNSW---EMTKLEDDVFSFGFMLLESVAGP-SVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~~~~--~~~~~~---~~~~~~~DV~SfGvil~ElltG~-~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|++|||++............. ..|... ...+.++|||||||++|||++|. .|+...... .... ... ...
T Consensus 148 ~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~-~~~--~~~ 222 (258)
T cd05078 148 KLSDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQ-FYE--DRH 222 (258)
T ss_pred EecccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHH-HHH--ccc
Confidence 999999985443221111111 111111 23466899999999999999995 454322111 1111 110 111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
.+.++ . ...+.+++.+||+.+|++|||+++|+++|
T Consensus 223 ~~~~~-----~----~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 223 QLPAP-----K----WTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred cCCCC-----C----cHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111 1 12367899999999999999999999886
No 171
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-32 Score=292.61 Aligned_cols=242 Identities=21% Similarity=0.351 Sum_probs=183.1
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
..|+..+.||+|+||.||+|+. .++..||+|.+........+.+.+|+.++++++||||+++++++.+.. .
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~--------~ 91 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--------E 91 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC--------E
Confidence 4677888999999999999985 468899999987655555677889999999999999999999988653 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.+. .+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred EEEeecccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 89999999999999988643 378899999999999999999997 89999999999999999999999999986
Q ss_pred cccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
........ + +..++.......+.++|||||||++|||++|+.||..... ...+...... .......+
T Consensus 165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~--~~~~~~~~~~-~~~~~~~~-- 239 (296)
T cd06654 165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--LRALYLIATN-GTPELQNP-- 239 (296)
T ss_pred hccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH--HHhHHHHhcC-CCCCCCCc--
Confidence 43221110 0 0111111123345789999999999999999999864332 1111111110 01111111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+.+++.+||+.+|++||++.||++.
T Consensus 240 -----~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 240 -----EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -----cccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1112346788999999999999999999874
No 172
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.8e-32 Score=295.16 Aligned_cols=251 Identities=21% Similarity=0.410 Sum_probs=187.0
Q ss_pred cCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
.+|.+.+.||+|+||.||+|+.. .+..||+|.++... ....+++.+|+++++++ +||||++++++|.+.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 35788899999999999999742 12368999887532 33467889999999999 7999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV 619 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl 619 (766)
..++++||+++|+|.+++.+.. +...++|..+..++.|++.||+|||+. +++||||
T Consensus 92 --------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dl 160 (334)
T cd05100 92 --------PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDL 160 (334)
T ss_pred --------ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccc
Confidence 6899999999999999987532 123588999999999999999999997 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCcccccccccc----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccC
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVSEDINSVG----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARK 688 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~~~~~~~~----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~ 688 (766)
||+||++++++.+||+|||+++......... +..++......++.++|||||||++|||++ |..|+...
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 161 AARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred ccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999986543221110 011111112345568999999999999998 77777532
Q ss_pred ccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 689 GQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
. .......+.. ...... + .. ....+.+++.+||+.+|.+||+|.|+++.|+.+...
T Consensus 241 ~--~~~~~~~~~~-~~~~~~--~---~~----~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 241 P--VEELFKLLKE-GHRMDK--P---AN----CTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred C--HHHHHHHHHc-CCCCCC--C---CC----CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 2 1222222211 111111 0 11 123477899999999999999999999999988753
No 173
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.6e-32 Score=285.06 Aligned_cols=243 Identities=22% Similarity=0.416 Sum_probs=183.3
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+|++.+.||+|+||.||+|.+.++..+|+|.+..... ...++.+|++++++++|||++++++++.... ..
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~~ 74 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS--------PI 74 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC--------ce
Confidence 35777889999999999999987788999998865432 3457889999999999999999999987653 67
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.... ..+++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~ 149 (256)
T cd05112 75 CLVFEFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRF 149 (256)
T ss_pred EEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceee
Confidence 99999999999999987543 2478999999999999999999987 899999999999999999999999999864
Q ss_pred cccccc--c-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINS--V-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~--~-------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
...... . ....++......++.++|||||||++|||++ |+.|+..... ......+.. . .....+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~-~--~~~~~~~ 224 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SEVVETINA-G--FRLYKPR 224 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHhC-C--CCCCCCC
Confidence 322110 0 0111111112345567899999999999998 8888864321 111111111 1 1111222
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
. . ...+.+++.+||+.+|++||+|.||+++|+
T Consensus 225 ~---~----~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 L---A----SQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred C---C----CHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1 1 134788999999999999999999998874
No 174
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.8e-32 Score=295.79 Aligned_cols=236 Identities=22% Similarity=0.290 Sum_probs=172.7
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +++.||||.++... ....+.+.+|+.++.++ +||||+++++++.+.+ ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~--------~~~ 72 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES--------RLF 72 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC--------EEE
Confidence 46899999999999864 68899999997532 23345678899999998 7999999999987653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 73 FVIEFVSGGDLMFHMQRQR---KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 9999999999998886543 488999999999999999999997 8999999999999999999999999998642
Q ss_pred cccc-c---c-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc------chHHHHhhhhcccCccccc
Q 004232 644 EDIN-S---V-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ------FLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 644 ~~~~-~---~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~------~~~~~~~~~~~~~~~~~~~ 709 (766)
.... . . + +..++......++.++|||||||++|||+||+.||+..+. ............. ...+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p 225 (329)
T cd05588 147 IRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK-QIRIP 225 (329)
T ss_pred ccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC-CCCCC
Confidence 1110 0 0 0 0111111123456689999999999999999999863211 1111111111111 11111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCC------HHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPS------FEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs------~~ev~~ 748 (766)
...+ ..+.+++.+|++.||.+||+ +.+|++
T Consensus 226 -----~~~~----~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 226 -----RSLS----VKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred -----CCCC----HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1111 23678999999999999997 566653
No 175
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.4e-32 Score=282.96 Aligned_cols=242 Identities=21% Similarity=0.300 Sum_probs=181.8
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-----hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|++++++++||||++++|++.+.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE---- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC----
Confidence 4688899999999999999985 468999999886432 223467889999999999999999999988753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++|+||+++++|.+++.+.. .+++.....++.+++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 78 ----~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 78 ----TLSIFMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred ----eEEEEEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 7899999999999999887543 378888899999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc-----------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV-----------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~-----------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ ....++.......+.++|||||||++|||++|+.|+...... ............
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~ 225 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--AAIFKIATQPTN 225 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--HHHHHHhccCCC
Confidence 9998643221110 011111111233556899999999999999999998643221 111111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+ ... ....+.+++.+||..+|.+||++.|+++.
T Consensus 226 ~~~-----~~~----~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 PQL-----PSH----VSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCC-----Ccc----CCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 111 111 12236788999999999999999999764
No 176
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2e-32 Score=288.13 Aligned_cols=238 Identities=19% Similarity=0.225 Sum_probs=173.2
Q ss_pred eecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||.||+++. .+|+.+|+|++..... ...+.+..|++++++++||||+++++++.+.. ..++||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~--------~~~lv~ 72 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT--------HLCLVM 72 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC--------eEEEEE
Confidence 69999999999985 4689999999864321 22345567999999999999999998887653 689999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.... ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 73 e~~~g~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 73 SLMNGGDLKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred ecCCCCCHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 9999999998886543 23488999999999999999999997 8999999999999999999999999998654322
Q ss_pred ccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHH-hhhhcccCccccccccccCCC
Q 004232 647 NSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEEL-DSLNSQEGRQRLVDPVVMATS 717 (766)
Q Consensus 647 ~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~-~~~~~~~~~~~~~d~~~~~~~ 717 (766)
... ....++......++.++|||||||++|||++|+.|+...... ....+ ..... ..+..+ ....
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~ 222 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLE----DEVKFE--HQNF 222 (277)
T ss_pred ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhc----cccccc--cccC
Confidence 111 011111111234567899999999999999999998632211 11111 11110 010000 0011
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 718 SLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 718 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
...+.+++.+|++.||.+||++.|+++..
T Consensus 223 ----~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 223 ----TEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ----CHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 12367899999999999999998776443
No 177
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=291.09 Aligned_cols=240 Identities=19% Similarity=0.335 Sum_probs=182.2
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.|...+.||+|+||.||||.. .+++.||+|.+.-.. ....+++++|+.++++++|+||.+++|.+..+. .
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~--------~ 85 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT--------K 85 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc--------c
Confidence 355568999999999999984 578999999997653 345788999999999999999999999888763 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
++++||||.+|++.+.+.... .++.....-+.+++..|+.|+|.+ +.+|||||+.|||+..+|.+|++|||++.
T Consensus 86 LwiiMey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ 159 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAG 159 (467)
T ss_pred HHHHHHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceee
Confidence 899999999999999886443 346666777888999999999998 78999999999999999999999999996
Q ss_pred ccccccccccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVGGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
..........+.-..++| ..+..|+||||+|++.+||++|.+|+..... ...+. .+.+-.-|.+
T Consensus 160 ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlf---lIpk~~PP~L 231 (467)
T KOG0201|consen 160 QLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLF---LIPKSAPPRL 231 (467)
T ss_pred eeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEE---eccCCCCCcc
Confidence 654332221111111223 3466799999999999999999999864322 00000 0111111222
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ..-..+.+++..|+.+||+.||++.++++.
T Consensus 232 ~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 232 DG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 22 122337788999999999999999998864
No 178
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-32 Score=302.07 Aligned_cols=191 Identities=21% Similarity=0.289 Sum_probs=152.6
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.|+..+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+.++++++|||||++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~------- 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD------- 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-------
Confidence 478889999999999999985 468899999986543 234567889999999999999999999988753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.+.. .++......++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 75 -~~~lv~E~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 75 -NLYFVMDYIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred -EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 7899999999999999987543 367788888999999999999997 899999999999999999999999999
Q ss_pred Cccccccc---------------------------------------------------c-cc---cCCCCCCcccCCCC
Q 004232 640 SIVSEDIN---------------------------------------------------S-VG---GKQEDPNSWEMTKL 664 (766)
Q Consensus 640 a~~~~~~~---------------------------------------------------~-~~---~~~~~~~~~~~~~~ 664 (766)
+....... . .+ +..++......++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 74211000 0 00 00011111123456
Q ss_pred CCCEeehhHHHHHHhcCCCccccC
Q 004232 665 EDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 665 ~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
++|||||||++|||+||+.||...
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCC
Confidence 789999999999999999999743
No 179
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.2e-32 Score=288.15 Aligned_cols=239 Identities=19% Similarity=0.290 Sum_probs=177.3
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+|+..+.||+|+||.||+|+. .+++.||+|.+... .....+++.+|++++++++||||++++++|...+ .
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------~ 73 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN--------R 73 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC--------E
Confidence 577788999999999999985 57899999998654 2344567889999999999999999999998753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|..+. .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 74 ~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~ 143 (279)
T cd06619 74 ISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVST 143 (279)
T ss_pred EEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcce
Confidence 79999999999997642 256788889999999999999997 89999999999999999999999999986
Q ss_pred cccccccc------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-----hHHHHhhhhcccCcccccc
Q 004232 642 VSEDINSV------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-----LQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 642 ~~~~~~~~------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~d 710 (766)
........ ....++.......+.++|||||||++|||++|+.|+...... .......+.. .. .
T Consensus 144 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~-----~ 217 (279)
T cd06619 144 QLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD-ED-----P 217 (279)
T ss_pred ecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc-cC-----C
Confidence 54322111 011111111234566899999999999999999998632111 0111111110 00 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+..... .....+.+++.+|++.+|.+||+++|+++.
T Consensus 218 ~~~~~~---~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 218 PVLPVG---QFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCC---cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111000 011236788999999999999999999865
No 180
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.6e-33 Score=309.17 Aligned_cols=261 Identities=15% Similarity=0.180 Sum_probs=175.8
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
...+|++.++||+|+||.||+|+. .+++.||||++.... ....+|+.+|++++|||||++++++....-......
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 346799999999999999999986 468999999885432 234579999999999999999998754321000011
Q ss_pred ceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEecC
Q 004232 560 NKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDY 637 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DF 637 (766)
..+++||||+++ ++.+++... .....+++.....++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 246799999996 676665431 1234588899999999999999999997 899999999999999654 7999999
Q ss_pred CCCccccccccc---ccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccC----
Q 004232 638 GLSIVSEDINSV---GGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEG---- 704 (766)
Q Consensus 638 Gla~~~~~~~~~---~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~---- 704 (766)
|+++........ .++. ..|. ....++.++|||||||++|||+||..||...... ....+........
T Consensus 216 Gla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~ 295 (440)
T PTZ00036 216 GSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295 (440)
T ss_pred ccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 999754321111 1110 1111 1124567899999999999999999998643211 1111111000000
Q ss_pred ------ccccccccccC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 ------RQRLVDPVVMA-----TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ------~~~~~d~~~~~-----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+.-|.... ..+......+.+++.+||+.||.+|||+.|+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00000000000 0000112347899999999999999999999855
No 181
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.9e-32 Score=284.00 Aligned_cols=246 Identities=22% Similarity=0.426 Sum_probs=187.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|.+.+.||+|+||.||+|...++..||||.+.... ...+++.+|+.++++++||||+++++++.+.. .
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 75 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE--------P 75 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC--------c
Confidence 46788899999999999999998878889999987543 23467899999999999999999999887643 5
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++++|.+++.+.. ...+++..+..++.+++.|++|||+. +++||||||+||++++++.+|++|||++.
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~ 151 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLAR 151 (261)
T ss_pred eEEEEeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccce
Confidence 799999999999999997643 24589999999999999999999987 89999999999999999999999999986
Q ss_pred cccccccc---------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSV---------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~---------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
........ .+..++.......+.++|||||||++||++| |+.|+..... ......+... .....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~---~~~~~~ 226 (261)
T cd05034 152 LIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVLEQVERG---YRMPRP 226 (261)
T ss_pred eccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC---CCCCCC
Confidence 54321100 0111111112345668999999999999999 8988864322 1112222111 011111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
. .. ...+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ~---~~----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 P---NC----PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred C---CC----CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1 11 2347789999999999999999999998874
No 182
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1e-32 Score=303.61 Aligned_cols=243 Identities=19% Similarity=0.222 Sum_probs=174.7
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~------ 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD------ 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 3688899999999999999985 468999999986532 223566889999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+++||||+++|+|.+++.+.. .++......++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 --~~~lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 75 --NLYFVMDYIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred --EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 7899999999999999997643 367778888899999999999997 89999999999999999999999999
Q ss_pred CCccccccc-----------------------------------------------c-ccc---CCCCCCcccCCCCCCC
Q 004232 639 LSIVSEDIN-----------------------------------------------S-VGG---KQEDPNSWEMTKLEDD 667 (766)
Q Consensus 639 la~~~~~~~-----------------------------------------------~-~~~---~~~~~~~~~~~~~~~D 667 (766)
++....... . .+. ..++......++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 974211000 0 000 0000011123456889
Q ss_pred EeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC---CHH
Q 004232 668 VFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP---SFE 744 (766)
Q Consensus 668 V~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP---s~~ 744 (766)
||||||++|||+||+.||...... .....+.... .....+.. ...+ ..+.+++.+|+ .+|.+|| ++.
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~--~~~~~~~~-~~~s----~~~~~li~~l~-~~p~~R~~~~t~~ 296 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPA--ETQLKVINWE--TTLHIPSQ-AKLS----REASDLILRLC-CGAEDRLGKNGAD 296 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHH--HHHHHHhccC--ccccCCCC-CCCC----HHHHHHHHHHh-cCHhhcCCCCCHH
Confidence 999999999999999999743321 1111111101 11111110 1111 22456666665 4999999 888
Q ss_pred HHHHH
Q 004232 745 DILWN 749 (766)
Q Consensus 745 ev~~~ 749 (766)
|+++.
T Consensus 297 ell~h 301 (376)
T cd05598 297 EIKAH 301 (376)
T ss_pred HHhCC
Confidence 88754
No 183
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.8e-32 Score=286.53 Aligned_cols=247 Identities=19% Similarity=0.298 Sum_probs=182.9
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+++.. +|..||+|.+... .....+.+.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------- 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-------- 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC--------
Confidence 35778899999999999999865 7899999988653 2334567889999999999999999999887753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++++|..++........+++.....++.+++.||.|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 73 AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 78999999999999998876433345899999999999999999999642 7999999999999999999999999998
Q ss_pred ccccccccc------ccCCCCCC------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCccc
Q 004232 641 IVSEDINSV------GGKQEDPN------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQR 707 (766)
Q Consensus 641 ~~~~~~~~~------~~~~~~~~------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~ 707 (766)
......... ....++.. .....+.++|||||||++|||+||+.||...... .......+.. .....
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~ 229 (286)
T cd06622 151 GNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD-GDPPT 229 (286)
T ss_pred ccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh-cCCCC
Confidence 643221110 01111111 0112356889999999999999999998643211 1111111111 00111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... .....+.+++.+||+.+|++||++++++..
T Consensus 230 -----~~~----~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 230 -----LPS----GYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -----CCc----ccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 111 122346788999999999999999999874
No 184
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-32 Score=302.06 Aligned_cols=184 Identities=18% Similarity=0.257 Sum_probs=148.4
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..+|++.+.||+|+||.||+++. .+++.||+|... .+.+.+|++++++++|||||++++++....
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-------- 156 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNK-------- 156 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC--------
Confidence 35799999999999999999985 468999999653 235678999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+. ++|..++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 157 ~~~lv~e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 157 FTCLILPRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred eeEEEEecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 6899999986 68888886542 478999999999999999999997 8999999999999999999999999998
Q ss_pred cccccccc------ccc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccc
Q 004232 641 IVSEDINS------VGG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 641 ~~~~~~~~------~~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~ 686 (766)
+....... .++ ..++......++.++|||||||++|||+||+.|+.
T Consensus 230 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 230 CFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred cccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 64322110 011 11111122345678999999999999999987754
No 185
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.9e-32 Score=283.81 Aligned_cols=241 Identities=21% Similarity=0.350 Sum_probs=179.7
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCCh------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+|...+.||+|+||.||+|...+|+.+|||.++... ....+.+.+|++++++++|+||++++++|.+.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----- 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN----- 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC-----
Confidence 467788999999999999998889999999886432 223456889999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++|+||+++|+|.+++.+.. .+++.....++.+++.|++|||+. +|+|+||||+||++++++.+||+||
T Consensus 76 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 146 (265)
T cd06631 76 ---TISIFMEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDF 146 (265)
T ss_pred ---eEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccc
Confidence 6899999999999999997643 378888889999999999999987 7999999999999999999999999
Q ss_pred CCCcccccccc----------c----ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc
Q 004232 638 GLSIVSEDINS----------V----GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 638 Gla~~~~~~~~----------~----~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
|++........ . ...+++.......+.++|||||||++|||+||+.|+...... .....+....
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~ 224 (265)
T cd06631 147 GCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--AAMFYIGAHR 224 (265)
T ss_pred hhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--HHHHHhhhcc
Confidence 99864321100 0 001111111233456799999999999999999998643211 1111111110
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. .+....... ..+.+++.+||+.+|.+||++.||++
T Consensus 225 ~~----~~~~~~~~~----~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 GL----MPRLPDSFS----AAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CC----CCCCCCCCC----HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 111111111 23678899999999999999999874
No 186
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-32 Score=295.50 Aligned_cols=241 Identities=23% Similarity=0.308 Sum_probs=176.2
Q ss_pred CCCcCCceecCCceeEEEEEe----cCCceEEEEEccCCh----hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+..|+.+++++ +||||+++++++.+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-- 78 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC--
Confidence 477889999999999999874 368899999986432 22345678899999999 4999999998887653
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||
T Consensus 79 ------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 79 ------KLHLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred ------EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 6899999999999999987543 478889999999999999999997 8999999999999999999999
Q ss_pred ecCCCCcccccccc-----cccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCcc-chHHHHhhhhccc
Q 004232 635 SDYGLSIVSEDINS-----VGGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ-FLQEELDSLNSQE 703 (766)
Q Consensus 635 ~DFGla~~~~~~~~-----~~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~-~~~~~~~~~~~~~ 703 (766)
+|||+++....... ..++. ..|.. ....+.++|||||||++|||+||+.||..... .....+......
T Consensus 147 ~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~- 225 (332)
T cd05614 147 TDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK- 225 (332)
T ss_pred eeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc-
Confidence 99999865321111 00111 01111 12245689999999999999999999863221 111111111000
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
.++......+ ..+.+++.+|++.||++|| ++.|+++
T Consensus 226 -----~~~~~~~~~~----~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 -----CDPPFPSFIG----PEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred -----CCCCCCCCCC----HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 1111111111 2367889999999999999 6667764
No 187
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.8e-32 Score=281.45 Aligned_cols=238 Identities=23% Similarity=0.422 Sum_probs=180.6
Q ss_pred CceecCCceeEEEEEecCCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEE
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYE 567 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~E 567 (766)
++||+|+||.||++...+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.. ..++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ--------PIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC--------CeEEEEE
Confidence 46899999999999977799999998875433 35678899999999999999999999987653 6899999
Q ss_pred ccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccc
Q 004232 568 FMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN 647 (766)
Q Consensus 568 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~ 647 (766)
|+++++|.+++.+.. ..+++.....++.+++.|++|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 73 ~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 73 LVPGGSLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred cCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCc
Confidence 999999999987543 2478889999999999999999987 89999999999999999999999999986543211
Q ss_pred cc----------ccCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 648 SV----------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 648 ~~----------~~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
.. .+..++......++.++|||||||++|||+| |..|+...... .....+.. . .....+
T Consensus 148 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~-~--~~~~~~----- 217 (251)
T cd05041 148 YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIES-G--YRMPAP----- 217 (251)
T ss_pred ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhc-C--CCCCCC-----
Confidence 10 0111111122345678999999999999999 77777533221 11111111 1 011111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
......+.+++.+|++.+|++||++.||++.|+
T Consensus 218 --~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 --QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred --ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 111234788999999999999999999999886
No 188
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.8e-32 Score=286.77 Aligned_cols=242 Identities=20% Similarity=0.302 Sum_probs=180.6
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
|++.+.||+|+||.||+|+.. ++..+|+|.+........+.+.+|+++++.++||||++++++|...+ ..+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--------~~~ 78 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN--------NLW 78 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC--------EEE
Confidence 455678999999999999865 57889999987665556678899999999999999999999988753 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||+++|+|..++.+.. ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 79 ~v~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 79 ILIEFCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccc
Confidence 9999999999998876432 3589999999999999999999997 8999999999999999999999999998543
Q ss_pred cccccc-----c---cCCCCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 644 EDINSV-----G---GKQEDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 644 ~~~~~~-----~---~~~~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
...... + +..++.. ....++.++|||||||++|||++|+.|+..... ......+... ....+..
T Consensus 154 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~-~~~~~~~ 230 (282)
T cd06643 154 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKS-EPPTLAQ 230 (282)
T ss_pred cccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--HHHHHHHhhc-CCCCCCC
Confidence 221110 0 0111110 112345689999999999999999999864221 1111111111 0111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+. .. ...+.+++.+||+.+|.+||++.+|++.
T Consensus 231 ~~---~~----~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 231 PS---RW----SSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred cc---cc----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 11 1236789999999999999999998754
No 189
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.9e-32 Score=295.13 Aligned_cols=233 Identities=19% Similarity=0.291 Sum_probs=172.6
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCC-CcccccceeecCCCCCCcC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHP-HLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hp-niv~l~g~~~~~~~~~~~~ 558 (766)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|+.+++.++|+ +|+++++++.+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~------- 73 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM------- 73 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-------
Confidence 4778899999999999999864 57899999987532 23456678899999999765 577888777664
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
+..|+||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 74 -~~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 74 -DRLYFVMEYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred -CEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 36899999999999999887543 378899999999999999999997 89999999999999999999999999
Q ss_pred CCccccccc--------ccccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDIN--------SVGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~--------~~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+++...... +..+..++......++.++|||||||++|||+||+.||..... ......+... ...+
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i~~~--~~~~-- 220 (324)
T cd05587 147 MCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQSIMEH--NVSY-- 220 (324)
T ss_pred cceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHcC--CCCC--
Confidence 985421110 0011112212223456789999999999999999999864322 1212222111 0111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
| ...+ ..+.+++.+|++.||.+||+.
T Consensus 221 ~---~~~~----~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 221 P---KSLS----KEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred C---CCCC----HHHHHHHHHHhhcCHHHcCCC
Confidence 1 1111 236788999999999999986
No 190
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.3e-32 Score=292.04 Aligned_cols=231 Identities=22% Similarity=0.306 Sum_probs=168.4
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHh-CCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAK-LRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~-l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +++.||||+++... ....+.+..|..++.. .+||||+++++++...+ ..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~--------~~~ 72 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE--------HLF 72 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC--------EEE
Confidence 36899999999999864 68899999987542 2234455566667665 48999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.... .++......++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~gg~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 73 FVMEYLNGGDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999999887543 378888889999999999999997 8999999999999999999999999998643
Q ss_pred cccccc-----cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINSV-----GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~~-----~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
...... +. ..++......++.++|||||||++|||++|+.||..... ......+... . +....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~--~-----~~~~~ 217 (316)
T cd05592 147 MNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--DELFDSILND--R-----PHFPR 217 (316)
T ss_pred CCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcC--C-----CCCCC
Confidence 211110 11 111111123456789999999999999999999864332 1222222111 0 10111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDI 746 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev 746 (766)
..+ ..+.+++.+||+.||++||++.+.
T Consensus 218 ~~~----~~~~~ll~~~l~~~P~~R~~~~~~ 244 (316)
T cd05592 218 WIS----KEAKDCLSKLFERDPTKRLGVDGD 244 (316)
T ss_pred CCC----HHHHHHHHHHccCCHHHcCCChHH
Confidence 111 235688999999999999998643
No 191
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.4e-32 Score=289.67 Aligned_cols=259 Identities=23% Similarity=0.330 Sum_probs=189.5
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeec
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCID 550 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~ 550 (766)
++++++..++++|++.+.||+|+||.||++.. .+++.+|+|.+..... ....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 45566677889999999999999999999986 4688999999865422 245678899999999 89999999999876
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
.+.. .....++||||+++|+|.++++... ....+++.....++.+++.||+|||+. +++||||||+||+++++
T Consensus 91 ~~~~---~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 91 ADKL---VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred cccc---CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 4311 1135899999999999999886421 234588999999999999999999987 89999999999999999
Q ss_pred CcEEEecCCCCccccccccc-----ccC-CCCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHH
Q 004232 630 RIAKLSDYGLSIVSEDINSV-----GGK-QEDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEEL 696 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~-----~~~-~~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~ 696 (766)
+.+||+|||++......... +.. ...|... ...+.++|||||||++|||++|+.|+..... ....
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--~~~~ 242 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--VKTL 242 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH--HHHH
Confidence 99999999998654321110 000 0011111 1245689999999999999999999864321 1111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+.. .....+.++ .+....+.+++.+||+.+|++||++.|+++
T Consensus 243 ~~~~~-~~~~~~~~~-------~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 243 FKIPR-NPPPTLLHP-------EKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred HHHhc-CCCCCCCcc-------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111 111111111 111234788999999999999999999975
No 192
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-32 Score=294.85 Aligned_cols=233 Identities=18% Similarity=0.291 Sum_probs=172.8
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+..|..++..+ +||+|+++++++.+.+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~------ 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD------ 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC------
Confidence 5778899999999999999864 67899999987532 22344566788888777 5889999998887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||
T Consensus 75 --~~~lv~E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 75 --RLYFVMEYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred --EEEEEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 7899999999999999887543 378899999999999999999997 89999999999999999999999999
Q ss_pred CCccccccc-c---c-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDIN-S---V-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~-~---~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+++...... . . + +..++......++.++|||||||++|||+||+.||..... ......+.... ..+
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~i~~~~--~~~-- 220 (323)
T cd05616 147 MCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHN--VAY-- 220 (323)
T ss_pred CceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--CCC--
Confidence 986432111 0 0 0 1111111223456789999999999999999999874332 11122221111 011
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
| ... ...+.+++.+|++.||.+|++.
T Consensus 221 p---~~~----s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 221 P---KSM----SKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred C---CcC----CHHHHHHHHHHcccCHHhcCCC
Confidence 1 111 1236789999999999999984
No 193
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.7e-32 Score=288.59 Aligned_cols=238 Identities=19% Similarity=0.337 Sum_probs=178.9
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
|+..+.||+|+||.||+|.. .++..||+|.++... ....+.+.+|++++++++||||+++++++.... ..
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~ 77 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT--------KL 77 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC--------ce
Confidence 44567899999999999985 468899999986433 344567899999999999999999999987653 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++... .+++.....++.++++|++|||+. +++|+||+|+||++++++.+|++|||++..
T Consensus 78 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 78 WIIMEYLGGGSALDLLKPG----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEEEccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccccc
Confidence 9999999999999988642 378899999999999999999987 899999999999999999999999999865
Q ss_pred ccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 643 SEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 643 ~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
....... + ...++......++.++|||||||++|||+||+.|+....... ....+. .. ..+...
T Consensus 151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~-~~-----~~~~~~ 222 (277)
T cd06642 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIP-KN-----SPPTLE 222 (277)
T ss_pred ccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhh-cC-----CCCCCC
Confidence 4322110 0 011111112334568999999999999999999975322111 111110 00 011111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+.+++.+||+.+|++||+|.+|++.
T Consensus 223 ----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 223 ----GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 1122347789999999999999999999985
No 194
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.2e-32 Score=293.33 Aligned_cols=232 Identities=22% Similarity=0.312 Sum_probs=170.7
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHh-CCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAK-LRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~-l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||+||+|+.. +++.||||.++... ....+.+..|..++.. .+||||+++++++.+.+ ..+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~--------~~~ 72 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE--------NLF 72 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC--------EEE
Confidence 36899999999999864 57899999987542 2234556677778876 48999999999988753 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 73 FVMEYLNGGDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999999987542 478899999999999999999997 8999999999999999999999999998642
Q ss_pred cccc----cc-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDIN----SV-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~----~~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
.... .. + +..++......++.++|||||||++|||++|+.||..... ......+.... +....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~~-------~~~~~ 217 (316)
T cd05619 147 MLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIRMDN-------PCYPR 217 (316)
T ss_pred CCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC-------CCCCc
Confidence 1110 00 1 1111111123456789999999999999999999864322 11122111110 11111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFE-DIL 747 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-ev~ 747 (766)
..+ ..+.+++.+|++.||++||++. ++.
T Consensus 218 ~~~----~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 218 WLT----REAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred cCC----HHHHHHHHHHhccCHhhcCCChHHHH
Confidence 111 2367889999999999999997 553
No 195
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.9e-32 Score=294.48 Aligned_cols=228 Identities=21% Similarity=0.313 Sum_probs=169.5
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +++.||||+++... ....+.+..|+.++..+ +||||+++++++.+.+ ..+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~--------~~~ 72 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD--------RLF 72 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC--------EEE
Confidence 36899999999999864 68899999986532 23345677788888876 6999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 73 iv~Ey~~~g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 73 FVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred EEEcCCCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 9999999999999887543 378889999999999999999997 8999999999999999999999999998643
Q ss_pred ccccc----c-cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINS----V-GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~----~-~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
..... . +. ..++......++.++|||||||++|||++|+.||..... ......+... ....|.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--~~~~~~i~~~----~~~~~~--- 217 (320)
T cd05590 147 IFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILND----EVVYPT--- 217 (320)
T ss_pred CcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHhcC----CCCCCC---
Confidence 11110 0 00 111111123456689999999999999999999864332 1112222111 111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
..+ ..+.+++.+|++.||.+||+.
T Consensus 218 ~~~----~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 WLS----QDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCC----HHHHHHHHHHcccCHHHCCCC
Confidence 111 236788999999999999998
No 196
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.2e-32 Score=286.24 Aligned_cols=241 Identities=23% Similarity=0.414 Sum_probs=177.6
Q ss_pred CceecCCceeEEEEEecC-------CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 489 AIMGEGSYGKLYKGRLEN-------GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.||+|+||.||+|+..+ ++.+|||.+.... ......+.+|++++++++||||++++|+|.+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------- 72 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-------- 72 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC--------
Confidence 468999999999998542 2579999886543 234567889999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-----c
Q 004232 561 KVFLVYEFMSNGNFRTHISENT----PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-----I 631 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-----~ 631 (766)
..++||||+++|+|.+++.... ....++|.+++.++.+++.|++|||+. +++||||||+||+++.+. .
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~ 149 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRV 149 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcc
Confidence 5799999999999999997532 123478999999999999999999986 799999999999999877 8
Q ss_pred EEEecCCCCccccccccc--c--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhh
Q 004232 632 AKLSDYGLSIVSEDINSV--G--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~--~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~ 700 (766)
+|++|||+++........ . ...++.......+.++|||||||++|||+| |+.|+..... .+....+.
T Consensus 150 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~ 227 (269)
T cd05044 150 VKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVT 227 (269)
T ss_pred eEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHh
Confidence 999999998643221100 0 011111112345678999999999999998 9988864322 11111111
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
. .. .+..+ ......+.+++.+||+.+|.+||++++|.+.|++
T Consensus 228 ~-~~--~~~~~-------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 A-GG--RLQKP-------ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred c-CC--ccCCc-------ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 11 11001 1112346789999999999999999999999873
No 197
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.7e-32 Score=283.16 Aligned_cols=242 Identities=24% Similarity=0.404 Sum_probs=182.0
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+|++.+.||+|+||.||+|.. +++.||+|.++... ..+.+.+|+.++++++|||++++++++.+. ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~---------~~ 73 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN---------GL 73 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC---------Cc
Confidence 4577889999999999999975 57889999986542 246788999999999999999999988653 36
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.... ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred EEEEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCcccee
Confidence 89999999999999987543 23478999999999999999999986 899999999999999999999999999865
Q ss_pred cccccccc-----cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 643 SEDINSVG-----GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 643 ~~~~~~~~-----~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
........ +..++.......+.++|||||||++|||++ |+.|+..... ......+ ...... ++ ...
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~-~~~~~~---~~--~~~ 221 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--KEVKECV-EKGYRM---EP--PEG 221 (254)
T ss_pred ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHH-hCCCCC---CC--CCc
Confidence 43211110 111111112345568899999999999998 8888764322 1111111 111111 11 011
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
....+.+++.+||+.+|.+||++++|+..|++
T Consensus 222 ----~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 222 ----CPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 12346789999999999999999999998864
No 198
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.3e-32 Score=285.11 Aligned_cols=247 Identities=21% Similarity=0.352 Sum_probs=183.0
Q ss_pred cCCCcCCceecCCceeEEEEEec------CCceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
++|+....||+|+||.||+|+.. +...||+|.+...... ..+++.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 81 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE--- 81 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC---
Confidence 46778889999999999999853 3567999988765443 4678999999999999999999999987653
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPG------KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
..++||||+++|+|.+++...... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.+
T Consensus 82 -----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 82 -----PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQ 153 (275)
T ss_pred -----cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCC
Confidence 579999999999999998754421 1589999999999999999999987 89999999999999999
Q ss_pred CcEEEecCCCCcccccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhh
Q 004232 630 RIAKLSDYGLSIVSEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSL 699 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~ 699 (766)
+.+|++|||+++......... +..++.........++|||||||++|||++ |..|+..... ...+...
T Consensus 154 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~~~~~~~ 231 (275)
T cd05046 154 REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--EEVLNRL 231 (275)
T ss_pred CcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--HHHHHHH
Confidence 999999999986432111000 111111112334567899999999999999 6777743211 1111111
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.. . ......+ ... ...+.+++.+||+.+|.+||++.|++++|.
T Consensus 232 ~~-~-~~~~~~~---~~~----~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 QA-G-KLELPVP---EGC----PSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred Hc-C-CcCCCCC---CCC----CHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11 1 0011111 011 124778999999999999999999999875
No 199
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.1e-32 Score=281.05 Aligned_cols=240 Identities=26% Similarity=0.451 Sum_probs=182.0
Q ss_pred CceecCCceeEEEEEecC----CceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|.... +..||+|.++..... ..+.+.+|++.+++++|+||+++++++.+. ...+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~~~~ 72 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEE--------EPLY 72 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCC--------CceE
Confidence 468999999999998653 788999999765433 367899999999999999999999998874 3689
Q ss_pred EEEEccCCCChhhhhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 564 LVYEFMSNGNFRTHISENTP------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
+||||+++|+|.+++.+... ...+++..+..++.+++.|++|||+. +++||||||+||++++++.+|++||
T Consensus 73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~df 149 (262)
T cd00192 73 LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDF 149 (262)
T ss_pred EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccc
Confidence 99999999999999976521 24589999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc---cc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcc
Q 004232 638 GLSIVSEDINS---VG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 638 Gla~~~~~~~~---~~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|.+........ .. ...++.......+.++||||+||++|||++ |..|+..... ......+.. ..
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~-~~-- 224 (262)
T cd00192 150 GLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK-GY-- 224 (262)
T ss_pred ccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc-CC--
Confidence 99865533210 00 011111111245668999999999999999 5888864321 111222211 11
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
....+. .....+.+++.+||+.+|++||++.|+++.|+
T Consensus 225 ~~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 RLPKPE-------YCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCCCc-------cCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 111111 11234778999999999999999999998874
No 200
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5.5e-32 Score=287.07 Aligned_cols=244 Identities=20% Similarity=0.292 Sum_probs=182.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+.|++.+.||+|+||.||+|+.. ++..||+|.+........+.+.+|+.++++++||||+++++++...+ .
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 83 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG--------K 83 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC--------e
Confidence 55778889999999999999864 58999999998766666788999999999999999999999887653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|..++.+.. ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEEEEecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 899999999999988876432 3488999999999999999999987 89999999999999999999999999975
Q ss_pred cccccccc--------ccCCCCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 642 VSEDINSV--------GGKQEDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 642 ~~~~~~~~--------~~~~~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
........ .+..++.. ....++.++|||||||++|||++|+.|+..... ......+... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~-~~~~~ 235 (292)
T cd06644 159 KNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKS-EPPTL 235 (292)
T ss_pred eccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--HHHHHHHhcC-CCccC
Confidence 43221100 01111110 112245679999999999999999998753221 1111111111 01111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+ . .....+.+++.+||+.+|++||++.||++.
T Consensus 236 ~~~---~----~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 236 SQP---S----KWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCC---c----ccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111 0 111236788999999999999999999763
No 201
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.4e-32 Score=287.95 Aligned_cols=245 Identities=20% Similarity=0.323 Sum_probs=185.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||.||+|+.. ++..||+|.+........+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------- 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-------- 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC--------
Confidence 456888899999999999999864 68999999987766666678999999999999999999999988653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|..++.+.. ..+++.....++.+++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 76 KLWILIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred eEEEEeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 6899999999999999987543 3488999999999999999999997 8999999999999999999999999997
Q ss_pred ccccccccc-----c---cCCCCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 641 IVSEDINSV-----G---GKQEDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 641 ~~~~~~~~~-----~---~~~~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
......... + ...++.. .....+.++|||||||++|||++|+.|+..... ......+.. .....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~~ 227 (280)
T cd06611 151 AKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP--MRVLLKILK-SEPPT 227 (280)
T ss_pred hhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH--HHHHHHHhc-CCCCC
Confidence 543221110 0 0111100 112345689999999999999999999864321 111111111 10111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+..+. .....+.+++.+||+.+|.+||++.+|++.
T Consensus 228 ~~~~~-------~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 228 LDQPS-------KWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred cCCcc-------cCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 11110 111236788999999999999999999765
No 202
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=279.84 Aligned_cols=259 Identities=19% Similarity=0.265 Sum_probs=182.2
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCC-cccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPH-LVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpn-iv~l~g~~~~~~~~~~~~ 558 (766)
..|+..++||+|.||+||+|+ ..+|+.||+|++.-... .......+|+.++++++|+| ||+|++++.+... ...
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~--~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN--HRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc--ccc
Confidence 345556789999999999998 45799999999975433 22345688999999999999 9999999987541 011
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPG-KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...+++|+||+.. +|.+++...... ..++-.....++.|+.+|++|||++ +|+||||||+|||++++|.+||+||
T Consensus 89 ~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeecc
Confidence 2368999999988 999998765421 3366677889999999999999998 8999999999999999999999999
Q ss_pred CCCcccccccc-----c---ccCCCCC-CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhh---hcccCc
Q 004232 638 GLSIVSEDINS-----V---GGKQEDP-NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSL---NSQEGR 705 (766)
Q Consensus 638 Gla~~~~~~~~-----~---~~~~~~~-~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~---~~~~~~ 705 (766)
|+|+...-... . -+.+++. .....++...|+||+|||+.||+++++-|+.... .+....+ ...+..
T Consensus 165 GlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--~~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 165 GLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--IDQLFRIFRLLGTPNE 242 (323)
T ss_pred chHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHcCCCCc
Confidence 99975431111 0 0111111 1123466788999999999999999887764332 2221111 111100
Q ss_pred cc------ccc-----ccccCCCC--H---HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QR------LVD-----PVVMATSS--L---ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~------~~d-----~~~~~~~~--~---~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ..+ +....... . .......+++.+|++++|.+|.|++.++.+
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 00 000 00000000 0 001357899999999999999999999876
No 203
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.3e-32 Score=299.04 Aligned_cols=256 Identities=18% Similarity=0.279 Sum_probs=179.5
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+++++.++||||+++++++.+.+.. ...
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~~ 77 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID---PFE 77 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc---ccc
Confidence 478889999999999999985 57899999998653 233456788999999999999999999998765311 113
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+. ++|.+.+... ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 78 EIYVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred eEEEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 5899999997 5787777543 3488999999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccccc-----CC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCccc--
Q 004232 641 IVSEDINSVGG-----KQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGRQR-- 707 (766)
Q Consensus 641 ~~~~~~~~~~~-----~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~-- 707 (766)
........... +. ..|.. ...++.++|||||||++|||++|+.||....... ...+...........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 65432111000 00 01110 1224567899999999999999999986433211 111111000000000
Q ss_pred ---------c----cccc-cc--CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 ---------L----VDPV-VM--ATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ---------~----~d~~-~~--~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+ ..+. .. .....+....+.+++.+|++.||.+|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0 0000 00 00000112346789999999999999999999864
No 204
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.5e-32 Score=293.03 Aligned_cols=232 Identities=21% Similarity=0.303 Sum_probs=170.4
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +|+.||+|+++... ....+.+..|..++... +||||+++++++.+.+ ..+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~--------~~~ 72 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE--------HLF 72 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC--------EEE
Confidence 46999999999999864 68899999987542 22345566777787754 8999999999987653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~E~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 73 FVMEFLNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EEECCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 9999999999999887543 378888999999999999999997 8999999999999999999999999998642
Q ss_pred cccc----cc-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDIN----SV-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~----~~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
.... .. + +..++......++.++|||||||++|||++|+.||..... ...+..+... . +....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~~~~--~-----~~~~~ 217 (316)
T cd05620 147 VFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESIRVD--T-----PHYPR 217 (316)
T ss_pred ccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC--C-----CCCCC
Confidence 1110 00 0 1111111223456789999999999999999999864332 1112221111 0 11111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFE-DIL 747 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-ev~ 747 (766)
... ..+.+++.+|++.||++||++. ++.
T Consensus 218 ~~~----~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 WIT----KESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCC----HHHHHHHHHHccCCHHHcCCChHHHH
Confidence 111 2366889999999999999984 554
No 205
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.4e-32 Score=292.30 Aligned_cols=233 Identities=23% Similarity=0.301 Sum_probs=173.8
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||+||+|+.. +++.||||+++... ......+.+|+.++..+ +||||+++++++.+.+ ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~--------~~~ 72 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD--------RLF 72 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC--------EEE
Confidence 46999999999999865 58899999987542 23345677888888888 6999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 73 FVMEYVNGGDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 9999999999999887543 488999999999999999999997 8999999999999999999999999998542
Q ss_pred ccccc--c---c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINS--V---G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~--~---~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
..... . + +..++......++.++|||||||++|||+||+.||..... ......+.... .. -| .
T Consensus 147 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~i~~~~--~~--~~---~ 217 (318)
T cd05570 147 ILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQSILEDE--VR--YP---R 217 (318)
T ss_pred CcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHHHHcCC--CC--CC---C
Confidence 11110 0 0 0111111123456789999999999999999999864332 11122221111 01 01 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSF-----EDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~-----~ev~~ 748 (766)
..+ ..+.+++.+||+.||.+||++ .++++
T Consensus 218 ~~~----~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 218 WLS----KEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred cCC----HHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 111 236789999999999999999 77754
No 206
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.5e-32 Score=283.36 Aligned_cols=252 Identities=20% Similarity=0.364 Sum_probs=181.5
Q ss_pred CCcCCceecCCceeEEEEEec----CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|.+.+.||+|+||.||+|.+. +++.||||.+... .....+++.+|++++++++||||+++++++....... .
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~--~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG--R 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC--c
Confidence 456788999999999999853 4688999988654 2334667889999999999999999999887643211 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENT---PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
....++++||+++|+|..++.... ....+++.....++.+++.|++|||+. +|+||||||+||++++++.+|++
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~ 155 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVA 155 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEEC
Confidence 123588999999999988774321 112478888999999999999999987 89999999999999999999999
Q ss_pred cCCCCcccccccc--cccCC--------CCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccC
Q 004232 636 DYGLSIVSEDINS--VGGKQ--------EDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 636 DFGla~~~~~~~~--~~~~~--------~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
|||+++....... ..... ++.......+.++|||||||++|||++ |+.|+..... ......+.....
T Consensus 156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~ 233 (273)
T cd05074 156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGNR 233 (273)
T ss_pred cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCCc
Confidence 9999865422110 00000 000111234567999999999999999 7888753221 111111111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
...+ . .....+.+++.+||+.+|++||++.||.+.|+.+
T Consensus 234 ---~~~~---~----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 ---LKQP---P----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred ---CCCC---C----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 1 1123478899999999999999999999999875
No 207
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.5e-32 Score=287.57 Aligned_cols=260 Identities=21% Similarity=0.318 Sum_probs=187.5
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeec
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCID 550 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~ 550 (766)
+.++.+.++.++|++.+.||+|+||.||+++. .+++.+|+|.+.... .....+.+|+.+++++ +||||++++++|..
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 34566667889999999999999999999985 468899999876532 2235678899999999 69999999998864
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
.... ..+..++||||+++|+|.+++... .....+++.....++.+++.||.|||+. +++||||||+||+++++
T Consensus 87 ~~~~---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 87 KDVK---NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred cccC---CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 3211 113689999999999999887642 1223578888999999999999999987 89999999999999999
Q ss_pred CcEEEecCCCCccccccccc----ccCC--CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHH
Q 004232 630 RIAKLSDYGLSIVSEDINSV----GGKQ--EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEEL 696 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~----~~~~--~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~ 696 (766)
+.+|++|||++......... .+.. ..|.. ...++.++|||||||++|||++|+.|+..... ...+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~--~~~~ 238 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP--MRAL 238 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch--hHHH
Confidence 99999999998654321110 0000 01111 12245689999999999999999999864321 1111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..... .......++.. . ...+.+++.+||+.||++||++.||++.
T Consensus 239 ~~~~~-~~~~~~~~~~~---~----~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 239 FKIPR-NPPPTLHQPEL---W----SNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hhccc-cCCCcccCCCC---c----CHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 11110 00111111111 1 1236789999999999999999999875
No 208
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=8e-32 Score=279.77 Aligned_cols=242 Identities=19% Similarity=0.278 Sum_probs=181.7
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+|++.+.||+|+||.||+++.. ++..+|+|.++.. .....+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 72 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG--------H 72 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC--------E
Confidence 4777899999999999999854 6889999988643 2344577888999999999999999999987653 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... ...++......++.+++.||+|||+. +|+|+||||+||++++++.++++|||.+.
T Consensus 73 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 73 LYIVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEEEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 899999999999999886532 23478888899999999999999997 89999999999999999999999999986
Q ss_pred ccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
......... ...++.......+.++||||||+++|||++|..|+..... ......+. ......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~-~~~~~~~~---- 221 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--KNLILKVC-QGSYKPLP---- 221 (255)
T ss_pred eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--HHHHHHHh-cCCCCCCC----
Confidence 543221110 0011111123356689999999999999999999864322 11111111 11111110
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ...+.+++.+||+.||++||++.+|+..
T Consensus 222 -~~~----~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 -SHY----SYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -ccc----CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 111 1236788999999999999999999864
No 209
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.5e-32 Score=280.07 Aligned_cols=242 Identities=19% Similarity=0.318 Sum_probs=182.9
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||.++. .+++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------- 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-------- 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC--------
Confidence 477789999999999999884 56889999987643 2444667889999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..+++|||+++|+|.+++.+.. ...+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||++
T Consensus 73 ~~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 73 TLLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred eEEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 6899999999999999987543 24578999999999999999999987 8999999999999999999999999998
Q ss_pred ccccccccccc--------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSVGG--------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........... ..++.......+.++|||||||++|||++|+.|+..... .+....+.. .......
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~-~~~~~~~--- 222 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--LNLVVKIVQ-GNYTPVV--- 222 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc-CCCCCCc---
Confidence 65433221100 011111112345679999999999999999999864322 222222211 1111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. .....+.+++.+||+.+|.+||++.++++.
T Consensus 223 --~----~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 223 --S----VYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --c----ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 1 112336788999999999999999999875
No 210
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.7e-32 Score=281.38 Aligned_cols=241 Identities=24% Similarity=0.355 Sum_probs=182.6
Q ss_pred cCCCcCCceecCCceeEEEEEecC-CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
++|+..+.||+|+||.||+|+... +..+|+|.+..... .+++.+|++++++++||||++++|++.+.. .
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--------~ 72 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT--------D 72 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC--------c
Confidence 578888999999999999999764 78999999875433 678999999999999999999999988753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++++||+++++|.+++.... ..+++.....++.+++.|+.|||+. +++||||+|+||++++++.+||+|||++.
T Consensus 73 ~~l~~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 73 LWIVMEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEEEEecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 899999999999999986533 3589999999999999999999987 89999999999999999999999999986
Q ss_pred ccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
......... ...++.......+.++|||||||++|||+||+.|+...... .....+.. ........
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~--- 221 (256)
T cd06612 148 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM--RAIFMIPN-KPPPTLSD--- 221 (256)
T ss_pred hcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh--hhhhhhcc-CCCCCCCc---
Confidence 543322110 01111111123456899999999999999999998642211 11111000 00000000
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.......+.+++.+||+.+|.+||++.||++
T Consensus 222 ----~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 222 ----PEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----hhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0111134678899999999999999999975
No 211
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.1e-32 Score=286.78 Aligned_cols=242 Identities=21% Similarity=0.353 Sum_probs=183.3
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.+|++.+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--------~ 90 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD--------E 90 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc--------e
Confidence 3588889999999999999984 578999999987655555677889999999999999999999988653 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||+++|+|..++.+. .+++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 91 LFVVMEYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEEEEecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 89999999999999988643 378999999999999999999997 89999999999999999999999999986
Q ss_pred cccccccc--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSV--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~--------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
........ .+..++.......+.++|||||||++|||+||+.||...... .....+.. ........+.
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--~~~~~~~~-~~~~~~~~~~- 239 (296)
T cd06655 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIAT-NGTPELQNPE- 239 (296)
T ss_pred hcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-cCCcccCCcc-
Confidence 43221111 011111112233556899999999999999999998643321 11111110 0011111110
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. ....+.+++.+||+.||.+||++.+|+..
T Consensus 240 --~----~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 240 --K----LSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred --c----CCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1 11236788999999999999999999854
No 212
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.3e-32 Score=297.33 Aligned_cols=250 Identities=18% Similarity=0.255 Sum_probs=181.4
Q ss_pred HHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCC
Q 004232 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (766)
Q Consensus 477 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~ 552 (766)
++....++|++.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445688999999999999999999864 68899999986432 233456788999999999999999999887653
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcE
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
..++||||+++|+|.+++... .++......++.+++.||+|||+. +|+||||||+|||++.++++
T Consensus 117 --------~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 117 --------YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred --------EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCE
Confidence 789999999999999988653 267777888999999999999997 89999999999999999999
Q ss_pred EEecCCCCcccccccc-----cccCC--CCCCcc------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhh
Q 004232 633 KLSDYGLSIVSEDINS-----VGGKQ--EDPNSW------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSL 699 (766)
Q Consensus 633 kl~DFGla~~~~~~~~-----~~~~~--~~~~~~------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~ 699 (766)
||+|||++........ ..++. ..|... ..++.++|||||||++|||++|+.||..... ......+
T Consensus 182 kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i 259 (371)
T cd05622 182 KLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSKI 259 (371)
T ss_pred EEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 9999999865432111 00111 011111 1245689999999999999999999974332 2222222
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHHH
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWS--RPSFEDILWNL 750 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~L 750 (766)
........+.++. .. ...+.+++.+|+..++.+ ||++.||.+..
T Consensus 260 ~~~~~~~~~~~~~---~~----s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 260 MNHKNSLTFPDDN---DI----SKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HcCCCcccCCCcC---CC----CHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 2211111121110 11 123567888999844433 78999888753
No 213
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5e-32 Score=288.14 Aligned_cols=242 Identities=20% Similarity=0.344 Sum_probs=182.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.+|.+.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+ .
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--------~ 90 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD--------E 90 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--------E
Confidence 5688889999999999999985 579999999997655555677889999999999999999999998753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.+. .+++..+..++.+++.||.|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 91 LWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred EEEeecccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccce
Confidence 89999999999999998643 378889999999999999999987 89999999999999999999999999986
Q ss_pred cccccccccc--------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVGG--------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~~--------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
.......... ..++.......+.++|||||||++||++||+.||...... ........ ........+
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~--~~~~~~~~-~~~~~~~~~-- 238 (297)
T cd06656 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIAT-NGTPELQNP-- 238 (297)
T ss_pred EccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc--hheeeecc-CCCCCCCCc--
Confidence 5432211100 0011111123456789999999999999999998643221 10000000 000111111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+.+++.+||+.+|++||++++|++.
T Consensus 239 -----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 239 -----ERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred -----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111236788999999999999999999873
No 214
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=4.6e-32 Score=292.01 Aligned_cols=229 Identities=19% Similarity=0.293 Sum_probs=167.7
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHH-HHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLD-LLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~-~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||+||+|+.. +|+.||||++.... ....+++..|.. +++.++||||+++++++.+.+ ..+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~--------~~~ 72 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD--------KLY 72 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC--------EEE
Confidence 36899999999999864 78999999986532 122344445544 567899999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 73 FVLDYVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred EEEcCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 9999999999999887543 478888889999999999999997 8999999999999999999999999998643
Q ss_pred cccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
...... + +..++......++.++|||||||++|||++|+.||..... ......+.... .. ..+
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~--~~-~~~---- 217 (323)
T cd05575 147 IEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--AEMYDNILNKP--LR-LKP---- 217 (323)
T ss_pred ccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--HHHHHHHHcCC--CC-CCC----
Confidence 211110 0 1111111223456689999999999999999999864321 22222221111 01 111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFE 744 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ 744 (766)
.. ...+.+++.+|++.||.+||++.
T Consensus 218 ~~----~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 218 NI----SVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CC----CHHHHHHHHHHhhcCHHhCCCCC
Confidence 11 12367889999999999999985
No 215
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.98 E-value=4.6e-32 Score=283.92 Aligned_cols=247 Identities=15% Similarity=0.303 Sum_probs=180.2
Q ss_pred CCCcCCceecCCceeEEEEEecC--CceEEEEEccCC----------hhhhHHHHHHHHHHHHh-CCCCCcccccceeec
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLEN--GTSVAIRCLPSS----------KKYTVRNLKLRLDLLAK-LRHPHLVCLLGHCID 550 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~--g~~vAvK~l~~~----------~~~~~~~~~~e~~~l~~-l~Hpniv~l~g~~~~ 550 (766)
+|++.+.||+|+||.||+|+... ++.+|+|.+... .....+++.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999754 788999987532 12234567778888875 799999999999887
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
.+ ..++||||+++++|.+++... .....+++..+..++.+++.||.|||+.. +++||||||+||+++.+
T Consensus 81 ~~--------~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~ 150 (269)
T cd08528 81 ND--------RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGED 150 (269)
T ss_pred CC--------eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCC
Confidence 53 689999999999999887542 12235788899999999999999999632 79999999999999999
Q ss_pred CcEEEecCCCCccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc
Q 004232 630 RIAKLSDYGLSIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
+.+||+|||++......... + ...++.......+.++|||||||++|||++|+.|+..... ......+..
T Consensus 151 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~~- 227 (269)
T cd08528 151 DKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--LSLATKIVE- 227 (269)
T ss_pred CcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--HHHHHHHhh-
Confidence 99999999998654332110 0 1111111223356689999999999999999999853321 111111111
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.......+ .. ....+.+++.+||+.||++||++.||..++.
T Consensus 228 ~~~~~~~~----~~----~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 AVYEPLPE----GM----YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred ccCCcCCc----cc----CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111000 01 1134678899999999999999999998875
No 216
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.98 E-value=6.1e-32 Score=281.57 Aligned_cols=246 Identities=20% Similarity=0.308 Sum_probs=185.0
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||++++|++.+..
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-------- 73 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-------- 73 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC--------
Confidence 357888899999999999999864 57889999998765556788999999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..+++|||+++++|.+++.... ..++......++.+++.|++|||+. +++||||||+||++++++.+||+|||++
T Consensus 74 ~~~l~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 148 (262)
T cd06613 74 KLWIVMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVS 148 (262)
T ss_pred EEEEEEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccc
Confidence 6899999999999999887542 3488889999999999999999987 8999999999999999999999999998
Q ss_pred ccccccccc--------ccCCCCCCccc---CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 641 IVSEDINSV--------GGKQEDPNSWE---MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 641 ~~~~~~~~~--------~~~~~~~~~~~---~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
......... ....++..... ..+.++|||||||++|||+||+.|+....... ........ .+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~--~~~~~~~~----~~~ 222 (262)
T cd06613 149 AQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR--ALFLISKS----NFP 222 (262)
T ss_pred hhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhc----cCC
Confidence 654321100 01111111112 45567899999999999999999986432211 11111111 000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+.. . ........+.+++.+||..+|.+||++.+|+.
T Consensus 223 ~~~~-~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 PPKL-K-DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred Cccc-c-chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0110 0 01112234778999999999999999999975
No 217
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.98 E-value=9.6e-32 Score=279.30 Aligned_cols=239 Identities=18% Similarity=0.325 Sum_probs=179.8
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-----hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|+..+.||+|+||+||+|... ++..||+|.+.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------ 75 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED------ 75 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC------
Confidence 566789999999999999975 78999999885432 234577899999999999999999999987653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++|+||+++++|.+++.+.. .+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 76 --~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~ 147 (258)
T cd06632 76 --NLYIFLELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFG 147 (258)
T ss_pred --eEEEEEEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCc
Confidence 6899999999999999987543 378999999999999999999987 89999999999999999999999999
Q ss_pred CCcccccccccc---c----CCCCCCccc-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSVG---G----KQEDPNSWE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~~---~----~~~~~~~~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
++.......... . ..++..... .++.++|||||||++|||++|+.|+..... ...............+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~-- 223 (258)
T cd06632 148 MAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVFKIGRSKELPPI-- 223 (258)
T ss_pred cceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--HHHHHHHHhcccCCCc--
Confidence 986543221100 0 011111111 256689999999999999999999864321 1111111111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... ....+.+++.+||+.+|.+||++.++++
T Consensus 224 ---~~~----~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 224 ---PDH----LSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ---CCC----cCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 011 1123678899999999999999999975
No 218
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.98 E-value=2.4e-32 Score=288.60 Aligned_cols=252 Identities=19% Similarity=0.291 Sum_probs=178.4
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|+.. +++.||||.++... ....+.+.+|+.++++++||||+++++++.+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------- 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-------- 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC--------
Confidence 4777889999999999999864 68999999986432 223467888999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++ |+|.+++........+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 73 RLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred eEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 6899999998 68988886544445688999999999999999999987 8999999999999999999999999998
Q ss_pred ccccccccc--------ccCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchH--HHHhhhhcc-------
Q 004232 641 IVSEDINSV--------GGKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ--EELDSLNSQ------- 702 (766)
Q Consensus 641 ~~~~~~~~~--------~~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~--~~~~~~~~~------- 702 (766)
......... ....++.. .....+.++|||||||++|||+||+.|+........ .........
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (285)
T cd07861 149 RAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPG 228 (285)
T ss_pred eecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhc
Confidence 643211110 00111100 112245678999999999999999999864322110 000000000
Q ss_pred ----cC----ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 703 ----EG----RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 703 ----~~----~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. ........... ........+.+++.+|++.||++|||+.+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 229 VTSLPDYKNTFPKWKKGSLRS-AVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred chhhHHHHhhccccCcchhHH-hcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 00000000000 00001133578999999999999999999875
No 219
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.98 E-value=7e-32 Score=283.98 Aligned_cols=239 Identities=18% Similarity=0.318 Sum_probs=181.8
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.|+..+.||+|+||.||+|... ++..||+|.++... ......+.+|++++++++||||+++++++.+.. .
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 76 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT--------K 76 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC--------E
Confidence 4666788999999999999864 68899999987543 344678899999999999999999999988753 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++... .+++.....++.+++.|++|+|+. +++|+||+|+||+++.++.++++|||++.
T Consensus 77 ~~lv~e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~ 149 (277)
T cd06640 77 LWIIMEYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEEEecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccce
Confidence 89999999999999988643 378888889999999999999987 89999999999999999999999999986
Q ss_pred ccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
......... ..+++.......+.++|||||||++|||+||+.|+...... .....+ ..... +
T Consensus 150 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~-~~~~~-----~-- 219 (277)
T cd06640 150 QLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--RVLFLI-PKNNP-----P-- 219 (277)
T ss_pred eccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH--hHhhhh-hcCCC-----C--
Confidence 543221110 11111111234566899999999999999999998632211 111100 00000 1
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.........+.+++.+||+.+|++||++.+|++.
T Consensus 220 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 --TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred --CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1112233457899999999999999999999876
No 220
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.98 E-value=3.7e-32 Score=293.02 Aligned_cols=233 Identities=20% Similarity=0.282 Sum_probs=169.4
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHH-HHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLD-LLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~-~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||+||+|+. .+|+.||||++.... ....+++..|.. +++.++||||+++++++...+ ..+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~--------~~~ 72 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE--------KLY 72 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC--------EEE
Confidence 3689999999999985 478999999986532 223345555554 577899999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.||+.||+|||+. +|+||||||+|||+++++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 73 FVLDFVNGGELFFHLQRER---SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999998886543 478889999999999999999997 8999999999999999999999999998643
Q ss_pred ccccc----c-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINS----V-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~----~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
..... . + +..++......++.++|||||||++|||++|+.||..... ......+.... ....+
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~~~~~~---~~~~~---- 217 (325)
T cd05604 147 IAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV--AEMYDNILHKP---LVLRP---- 217 (325)
T ss_pred CCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH--HHHHHHHHcCC---ccCCC----
Confidence 21110 0 0 1111111223456789999999999999999999864321 12222221111 00111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... ..+.+++.+|++.+|.+||++++.+.
T Consensus 218 ~~~----~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 218 GAS----LTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred CCC----HHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 111 23668899999999999998864433
No 221
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.98 E-value=9.6e-32 Score=293.92 Aligned_cols=256 Identities=18% Similarity=0.220 Sum_probs=179.3
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|++.+.||+|+||.||+++. .+|..||||++... .......+.+|+.+++.++||||+++++++.......
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE-- 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc--
Confidence 347799999999999999999985 46899999998643 2334567889999999999999999999886543111
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++||||+++ ++.+.++. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecC
Confidence 11357999999986 56555542 267888889999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---------
Q 004232 638 GLSIVSEDINSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS--------- 701 (766)
Q Consensus 638 Gla~~~~~~~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~--------- 701 (766)
|+++........ .+..++......++.++|||||||++|||+||+.||...... ..+..+..
T Consensus 168 g~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 168 GLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI--DQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCcHHH
Confidence 998653221110 111122122234566899999999999999999998643211 10100000
Q ss_pred -------------cc-Cc-----cccccccccC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 -------------QE-GR-----QRLVDPVVMA---TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 -------------~~-~~-----~~~~d~~~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. .. .+........ .........+.+++.+|++.||++|||+.|++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00 0000000000 0000112346789999999999999999999875
No 222
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.98 E-value=7.8e-32 Score=290.76 Aligned_cols=189 Identities=20% Similarity=0.262 Sum_probs=148.8
Q ss_pred cCCceecC--CceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 487 MSAIMGEG--SYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 487 ~~~~lG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+.++||+| +|++||+++. .+|+.||||+++... ....+.+.+|+++++.++||||++++++|.+.+ .
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~--------~ 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN--------E 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC--------E
Confidence 45789999 7899999985 578999999987542 233456788999999999999999999998763 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||...
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEEEEeccCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 8999999999999999865432 3488999999999999999999987 89999999999999999999999998653
Q ss_pred ccccccc----------c--ccC-CCCCCcc----cCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 642 VSEDINS----------V--GGK-QEDPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 642 ~~~~~~~----------~--~~~-~~~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
....... . ... ...|... ..++.++|||||||++|||++|+.||..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 2211000 0 000 0111111 2355789999999999999999999864
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.98 E-value=1.1e-31 Score=280.56 Aligned_cols=238 Identities=20% Similarity=0.327 Sum_probs=177.3
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh---------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
|.+...||+|+||.||+|.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 79 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD-- 79 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC--
Confidence 55678999999999999985 4688999998854321 12356889999999999999999999987753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++++|.+++.... .+++.....++.+++.|++|||+. +++||||||+||++++++.+||
T Consensus 80 ------~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l 147 (267)
T cd06628 80 ------HLNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKI 147 (267)
T ss_pred ------ccEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEe
Confidence 6799999999999999997543 378888999999999999999987 8999999999999999999999
Q ss_pred ecCCCCccccccccc-----------c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh
Q 004232 635 SDYGLSIVSEDINSV-----------G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 635 ~DFGla~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 700 (766)
+|||+++........ + ...++.......+.++|||||||++|||++|+.|+..... ...+..+.
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~ 225 (267)
T cd06628 148 SDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ--LQAIFKIG 225 (267)
T ss_pred cccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH--HHHHHHHh
Confidence 999998655321100 0 0001111112345678999999999999999999864321 11111111
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ...+...... ...+.+++.+||+.||.+||++.||++
T Consensus 226 ~------~~~~~~~~~~----~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 226 E------NASPEIPSNI----SSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c------cCCCcCCccc----CHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1 0111111111 234678899999999999999999975
No 224
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=6.3e-32 Score=282.56 Aligned_cols=243 Identities=19% Similarity=0.264 Sum_probs=180.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
++|+..+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++.+.+ .
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~--------~ 80 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD--------K 80 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC--------E
Confidence 4567778999999999999985 468999999987665555567888999999999999999999987653 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... .+++.+...++.+++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 81 LWICMEFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEEEeccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 899999999999999887543 478999999999999999999997 89999999999999999999999999985
Q ss_pred ccccccc--------cccCCCCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc-cccc
Q 004232 642 VSEDINS--------VGGKQEDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR-QRLV 709 (766)
Q Consensus 642 ~~~~~~~--------~~~~~~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 709 (766)
....... ....+++.. ....++.++|||||||++|||++|+.|+........ .......... ....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~ 232 (267)
T cd06645 155 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--LFLMTKSNFQPPKLK 232 (267)
T ss_pred EccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh--HHhhhccCCCCCccc
Confidence 4322110 001111111 112355689999999999999999998753322111 1111100000 0000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+. ...+ ..+.+++.+|++.+|++||++++|+.
T Consensus 233 ~~---~~~~----~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 DK---MKWS----NSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cc---CCCC----HHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 0111 23678899999999999999999875
No 225
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.98 E-value=1.3e-31 Score=283.17 Aligned_cols=243 Identities=18% Similarity=0.228 Sum_probs=177.7
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|+..+.||+|+||+||+|.. .+++.||+|.+.... ....+.+.+|++++++++|+||+++.+++.+.+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-------- 73 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-------- 73 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--------
Confidence 55678899999999999986 468999999986542 223455788999999999999999998887653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|..++.... ...+++.....++.|++.||.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 74 ALCLVLTIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 6899999999999998886533 23589999999999999999999987 8999999999999999999999999998
Q ss_pred ccccccccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 712 (766)
......... ....++.......+.++|||||||++|||+||..||....... ...+....... ...
T Consensus 150 ~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~~----- 223 (285)
T cd05632 150 VKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-EEV----- 223 (285)
T ss_pred eecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc-ccc-----
Confidence 553221110 1111111112345668899999999999999999986432211 11111111100 000
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPS-----FEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~~ 749 (766)
..... ...+.+++.+|++.||++||+ +++++..
T Consensus 224 ~~~~~----~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 224 YSAKF----SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cCccC----CHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 11111 123678899999999999999 5566553
No 226
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.98 E-value=1.1e-31 Score=282.07 Aligned_cols=240 Identities=20% Similarity=0.319 Sum_probs=182.4
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+|++.+.||.|+||.||+|+.. +++.||+|.+.... ......+.+|++++++++||||+++++++.+.. .
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 73 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS--------K 73 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC--------e
Confidence 5777889999999999999864 68999999986543 344567889999999999999999999988653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||+++|+|.+++... .+++.....++.|++.|+.|||+. +++||||+|+||++++++.++++|||+++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 146 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSG 146 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccce
Confidence 89999999999999998753 488999999999999999999987 89999999999999999999999999986
Q ss_pred cccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
........ + ...++......++.++|||||||++|||+||+.|+..... ......+. ......+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~- 222 (274)
T cd06609 147 QLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--MRVLFLIP-KNNPPSLEGNK- 222 (274)
T ss_pred eecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--HHHHHHhh-hcCCCCCcccc-
Confidence 54332110 0 1111111223356789999999999999999999863221 11111111 11111111110
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+.+++.+||..+|++||+++++++.
T Consensus 223 -------~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 223 -------FSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -------cCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11236788999999999999999999764
No 227
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=293.80 Aligned_cols=237 Identities=23% Similarity=0.360 Sum_probs=181.3
Q ss_pred ceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEc
Q 004232 490 IMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEF 568 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey 568 (766)
++|+|.||+||.|+. .+...+|||.++.......+.+..||.+.++++|+|||+++|.|.+.+ .+-+.||-
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG--------f~kIFMEq 653 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG--------FFKIFMEQ 653 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC--------eEEEEeec
Confidence 689999999999994 456789999998877777888999999999999999999999987764 78899999
Q ss_pred cCCCChhhhhhcCCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CCCcEEEecCCCCccccc
Q 004232 569 MSNGNFRTHISENTPGKVL--NWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLSIVSED 645 (766)
Q Consensus 569 ~~~GsL~~~l~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DFGla~~~~~ 645 (766)
+|||+|..+|+.. -.++ .....-.+..||.+||.|||+. .|||||||-.|||++ -.|.+||+|||-++....
T Consensus 654 VPGGSLSsLLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 654 VPGGSLSSLLRSK--WGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CCCCcHHHHHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 9999999999753 1224 4556677889999999999998 789999999999997 578999999999876543
Q ss_pred ccccccCC--------CCC--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 646 INSVGGKQ--------EDP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 646 ~~~~~~~~--------~~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
......+. ++. .....+..++|||||||++.||.||++||.+-+.-....+. ....+ +.|.+
T Consensus 729 inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk-----VGmyK-vHP~i-- 800 (1226)
T KOG4279|consen 729 INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK-----VGMYK-VHPPI-- 800 (1226)
T ss_pred CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh-----hccee-cCCCC--
Confidence 32221111 110 11234566889999999999999999999754432111111 11122 22322
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+++...++..++++|++.||.+||++.+++..
T Consensus 801 --Peelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 801 --PEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred --cHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 33444557889999999999999999999865
No 228
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.98 E-value=4.8e-32 Score=290.02 Aligned_cols=253 Identities=17% Similarity=0.237 Sum_probs=178.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|.+.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|++++++++||||+++++++...+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 77 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-------- 77 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC--------
Confidence 46888899999999999999854 688899999865432 22346778999999999999999999988653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++ +|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 78 SLTLVFEYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred eEEEEEeCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 68999999985 8888776543 3478888899999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc-----ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcc--------
Q 004232 641 IVSEDINSV-----GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQ-------- 702 (766)
Q Consensus 641 ~~~~~~~~~-----~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~-------- 702 (766)
......... +... ..|. .....+.++|||||||++|||+||+.||...... ....+......
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07872 152 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG 231 (309)
T ss_pred eecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence 643221110 0000 0111 1123456789999999999999999998643321 11111110000
Q ss_pred ----cCccccccccccCCCC----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 ----EGRQRLVDPVVMATSS----LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 ----~~~~~~~d~~~~~~~~----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........+....... ...-..+.+++.+|++.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000000000 0011236789999999999999999999874
No 229
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.98 E-value=1.8e-31 Score=279.06 Aligned_cols=242 Identities=21% Similarity=0.296 Sum_probs=175.9
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-----hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|+..+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--- 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE--- 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC---
Confidence 3688889999999999999985 468999999885331 2334678899999999999999999998875321
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
...++++||+++++|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ---~~~~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 ---KTLTIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 36799999999999999987543 378889999999999999999987 899999999999999999999999
Q ss_pred CCCCccccccccc-------c----cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV-------G----GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~-------~----~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||++......... . ...++.......+.++|||||||++|||+||+.|+..... ...........
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~--~~~~~~~~~~~-- 225 (266)
T cd06651 150 FGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA--MAAIFKIATQP-- 225 (266)
T ss_pred CCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch--HHHHHHHhcCC--
Confidence 9998643221100 0 0111111112345688999999999999999999864321 11111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+...... ...+.+++ +||..+|++||+|+||++
T Consensus 226 ---~~~~~~~~~----~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 226 ---TNPQLPSHI----SEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---CCCCCchhc----CHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 011111111 11234444 799999999999999975
No 230
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.98 E-value=4.3e-32 Score=286.82 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=179.5
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK------- 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC-------
Confidence 35778899999999999999975 58999999886432 223567888999999999999999999987653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||++++++..+..... .++|..+..++.+++.||+|||+. +++||||+|+||++++++.+||+|||+
T Consensus 74 -~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 74 -RLYLVFEFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred -eEEEEEecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 6899999999999988765432 388999999999999999999987 899999999999999999999999999
Q ss_pred Ccccccccccc--------cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcc--cCccc
Q 004232 640 SIVSEDINSVG--------GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQ--EGRQR 707 (766)
Q Consensus 640 a~~~~~~~~~~--------~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~--~~~~~ 707 (766)
+.......... ...++.. .....+.++|||||||++|||++|++|+....... .......... .....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07846 147 ARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226 (286)
T ss_pred eeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence 86543221110 0111111 11234567999999999999999998886332110 0000000000 00000
Q ss_pred c----------ccccccCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 708 L----------VDPVVMATSS-----LESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 708 ~----------~d~~~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ..+....... ......+.+++.+||+.+|++||+|.+|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0 0000000000 011234788999999999999999999875
No 231
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.98 E-value=7e-32 Score=290.46 Aligned_cols=234 Identities=19% Similarity=0.298 Sum_probs=172.3
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+|+..+.||+|+||.||+|+. .+|+.||+|+++... ....+.+..|..+++.+. |++|+++++++.+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~------- 73 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV------- 73 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-------
Confidence 467789999999999999985 468999999987532 233456778888888886 56777888777664
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
+..++||||+++|+|.+++.+.. .+++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 74 -~~~~lv~Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 -DRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred -CEEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 36899999999999999987543 388999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc----c-cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINS----V-GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~----~-~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+++....... . +. ..++......++.++|||||||++|||+||+.|+..... ......+.... ..+
T Consensus 147 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i~~~~--~~~-- 220 (323)
T cd05615 147 MCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DELFQSIMEHN--VSY-- 220 (323)
T ss_pred cccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--CCC--
Confidence 9864321110 0 11 111111223456789999999999999999999864332 11112221111 011
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFE 744 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ 744 (766)
| ...+ ..+.+++.+|++.+|.+|++..
T Consensus 221 p---~~~~----~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 221 P---KSLS----KEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred C---ccCC----HHHHHHHHHHcccCHhhCCCCC
Confidence 1 1111 2367889999999999999853
No 232
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.98 E-value=8.6e-32 Score=284.57 Aligned_cols=243 Identities=18% Similarity=0.269 Sum_probs=179.0
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|+..+.||+|+||.||++... +++.||||.+.... ....+.+..|+.++++++|+||+++++.+.+.+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-------- 73 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-------- 73 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--------
Confidence 667789999999999999854 68999999986532 222355778999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 74 ~~~lv~e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 74 ALCLVLTLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 6899999999999999886433 23488899999999999999999986 8999999999999999999999999998
Q ss_pred ccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~~~~d~~ 712 (766)
......... + ...++......++.++|||||||++|||++|+.||....... ........... ...
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~----- 223 (285)
T cd05630 150 VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-QEE----- 223 (285)
T ss_pred eecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh-hhh-----
Confidence 654321111 0 111111112345678999999999999999999986432211 11111111000 000
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPS-----FEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~~ 749 (766)
..... ...+.+++.+||+.||.+||+ +.|++++
T Consensus 224 ~~~~~----~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 224 YSEKF----SPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cCccC----CHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 01111 123678899999999999999 7788763
No 233
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.98 E-value=4.3e-32 Score=296.73 Aligned_cols=192 Identities=20% Similarity=0.335 Sum_probs=154.5
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|+..+.||+|+||.||+++.. +++.||||+++... ....+.+.+|+.++.+++||||+++++.+.+.+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~------ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR------ 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------
Confidence 46888899999999999999864 68999999986532 233567888999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 --~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 75 --NLYLIMEFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred --EEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 7899999999999999987543 378888899999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc---------------------------------------cccC----CCCCCcccCCCCCCCEeehhHHH
Q 004232 639 LSIVSEDINS---------------------------------------VGGK----QEDPNSWEMTKLEDDVFSFGFML 675 (766)
Q Consensus 639 la~~~~~~~~---------------------------------------~~~~----~~~~~~~~~~~~~~DV~SfGvil 675 (766)
+++....... ..++ .++......++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 9854321100 0000 00001113355689999999999
Q ss_pred HHHhcCCCccccC
Q 004232 676 LESVAGPSVAARK 688 (766)
Q Consensus 676 ~ElltG~~p~~~~ 688 (766)
|||+||+.||...
T Consensus 227 yel~tG~~Pf~~~ 239 (360)
T cd05627 227 YEMLIGYPPFCSE 239 (360)
T ss_pred eecccCCCCCCCC
Confidence 9999999998643
No 234
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.98 E-value=1.7e-31 Score=288.07 Aligned_cols=231 Identities=20% Similarity=0.281 Sum_probs=169.4
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++.++ +||||+++++++.+.. .++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--------~~~ 72 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS--------RLF 72 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC--------EEE
Confidence 46999999999999864 67899999997542 23356688899999888 6999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 73 LVIEYVNGGDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999998886543 488999999999999999999997 8999999999999999999999999998642
Q ss_pred ccccc----cccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc----chHHHHhhhhcccCccccccc
Q 004232 644 EDINS----VGGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ----FLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 644 ~~~~~----~~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~----~~~~~~~~~~~~~~~~~~~d~ 711 (766)
..... ..++ .++......++.++|||||||++|||+||+.||..... ............. ..++ |
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~--p 223 (327)
T cd05617 147 LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK-PIRI--P 223 (327)
T ss_pred cCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC-CCCC--C
Confidence 11110 0011 11111123456789999999999999999999853211 1111111111110 0111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
. ..+ ..+.+++.+|++.||.+||++
T Consensus 224 ~---~~~----~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 224 R---FLS----VKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred C---CCC----HHHHHHHHHHhccCHHHcCCC
Confidence 1 111 235688999999999999984
No 235
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.98 E-value=1.8e-31 Score=277.39 Aligned_cols=242 Identities=20% Similarity=0.306 Sum_probs=181.0
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|++++++++|||++++++.+...+ .
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------~ 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED-------G 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC-------C
Confidence 4778899999999999999854 57899999986432 334567889999999999999999998765432 2
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++++|.+++.... ...+++.++..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 74 LLYIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEEEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 5799999999999999987542 24588999999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
......... ...+++.......+.++|||||||++|||++|+.|+..... ......+. .+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--~~~~~~~~-~~~~~~~---- 222 (257)
T cd08223 150 RVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--NSLVYRII-EGKLPPM---- 222 (257)
T ss_pred EEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH-hcCCCCC----
Confidence 654321111 01111111223345689999999999999999999864322 11111111 1111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.......+.+++.+||+.+|.+||++.++++
T Consensus 223 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 223 -----PKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -----ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0111234778999999999999999999975
No 236
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=6.3e-32 Score=314.76 Aligned_cols=251 Identities=16% Similarity=0.268 Sum_probs=182.6
Q ss_pred HHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
...++|.+.+.||+|+||+||+|+. .++..||+|.+... .......+..|+.++++++|||||++++++.+...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~--- 86 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN--- 86 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC---
Confidence 3457899999999999999999985 45788999988643 23445778999999999999999999998875431
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCC----CCcccCCCCCCceEEcCC--
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVI----PGFFNNRVKTNNILLNEH-- 629 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivHrdlk~~NILld~~-- 629 (766)
..+|+||||+++|+|.++|.... ....+++...+.|+.||+.||+|||+... .+|+||||||+|||++.+
T Consensus 87 ---~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 87 ---QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 36899999999999999987532 12358999999999999999999998531 259999999999999642
Q ss_pred ---------------CcEEEecCCCCccccccccc----ccCC-CCCCc----ccCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 630 ---------------RIAKLSDYGLSIVSEDINSV----GGKQ-EDPNS----WEMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 630 ---------------~~~kl~DFGla~~~~~~~~~----~~~~-~~~~~----~~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
+.+||+|||++......... +... ..|.. ...++.++|||||||++|||+||+.||
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF 243 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243 (1021)
T ss_pred ccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCC
Confidence 35899999998654321111 1100 01111 123456899999999999999999998
Q ss_pred ccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 686 ARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...... ...+..+.. . ..+ .. ... ...+.+|+.+||+.+|.+||++.|++.
T Consensus 244 ~~~~~~-~qli~~lk~-~--p~l---pi-~~~----S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 244 HKANNF-SQLISELKR-G--PDL---PI-KGK----SKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcCCcH-HHHHHHHhc-C--CCC---Cc-CCC----CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 643221 111111111 1 010 00 111 123678999999999999999999984
No 237
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.98 E-value=2.7e-31 Score=280.54 Aligned_cols=252 Identities=22% Similarity=0.282 Sum_probs=180.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|+....||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++|||++++++++....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~------- 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR------- 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-------
Confidence 35788899999999999999865 68999999886432 223456789999999999999999999988753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||++++.+..+.... ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 74 -~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 74 -KLHLVFEYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred -EEEEEEeccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 689999999999998876543 2488999999999999999999996 899999999999999999999999999
Q ss_pred Cccccccccc----ccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH-Hhhhh----c----
Q 004232 640 SIVSEDINSV----GGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE-LDSLN----S---- 701 (766)
Q Consensus 640 a~~~~~~~~~----~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~-~~~~~----~---- 701 (766)
+......... .... ..|.. ....+.++|||||||++|||+||+.||.......... +.... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07847 147 ARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 226 (286)
T ss_pred ceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 8654332210 0000 01111 1234568999999999999999999986432211110 10000 0
Q ss_pred ---c-cCccccccccccCCCCHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 702 ---Q-EGRQRLVDPVVMATSSLE-----SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 702 ---~-~~~~~~~d~~~~~~~~~~-----~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ........+......+.+ ....+.+++.+||+.+|++||++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0 000000001000000000 1234778999999999999999999875
No 238
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.98 E-value=1.7e-31 Score=277.51 Aligned_cols=241 Identities=17% Similarity=0.269 Sum_probs=181.7
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||+++. .+|+.||+|++... .....+++.+|+.++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-------- 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC--------
Confidence 477789999999999999985 46889999998643 2334567899999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+++++|.+++.+... ..+++.....++.+++.|++|||+. +++|+||+|+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 73 NLYIVMDYCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred eEEEEEecCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 78999999999999998875432 2478889999999999999999987 8999999999999999999999999998
Q ss_pred cccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
.......... ..+++.......+.++|||||||++|||+||+.|+..... ......+.. +.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~~~~-~~~~~~---- 221 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--KNLVLKIIR-GSYPPV---- 221 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--HHHHHHHhc-CCCCCC----
Confidence 6543321110 1111111123455689999999999999999999864322 111111111 111110
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+......+.+++.+||+.+|++||+|++|++
T Consensus 222 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 222 -----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -----cccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0111234778999999999999999999986
No 239
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.98 E-value=1.4e-31 Score=288.05 Aligned_cols=229 Identities=20% Similarity=0.283 Sum_probs=166.3
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHH-HHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLD-LLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~-~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
++||+|+||.||+|+.. +|+.||+|++.... ....+++.+|.. +++.++||||+++++++.+.+ ..+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~--------~~~ 72 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE--------KLY 72 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC--------EEE
Confidence 46999999999999864 68899999986532 222344555554 678899999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+.......++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 73 FVLDYVNGGELFFHLQRER---CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred EEEcCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999999998886532 367788888999999999999987 8999999999999999999999999998642
Q ss_pred ccccc-c----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINS-V----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~-~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
..... . + +..++......++.++|||||||++|||++|+.||..... ......+... ...+. .
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~--~~~~~-----~ 217 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQMYDNILHK--PLQLP-----G 217 (321)
T ss_pred CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HHHHHHHhcC--CCCCC-----C
Confidence 11111 0 0 0111111123456689999999999999999999864322 1111222111 01110 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFE 744 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ 744 (766)
.. ...+.+++.+|++.||.+||+..
T Consensus 218 ~~----~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GK----TVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CC----CHHHHHHHHHHccCCHhhcCCCC
Confidence 11 12367889999999999999764
No 240
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.98 E-value=1.7e-31 Score=280.06 Aligned_cols=244 Identities=20% Similarity=0.337 Sum_probs=178.7
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh----------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCC
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK----------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~----------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~ 553 (766)
|...+.||+|+||.||+|.. .+|+.||+|.++... ....+.+.+|+.++++++|||++++++++...+
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 81 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE- 81 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC-
Confidence 55678999999999999985 468999999875321 112356788999999999999999999987653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
..++||||+++|+|.+++++.. .+++..+..++.+++.|+.|||+. +++||||||+||+++.++.+|
T Consensus 82 -------~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~ 148 (272)
T cd06629 82 -------YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICK 148 (272)
T ss_pred -------ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEE
Confidence 6899999999999999987652 488888999999999999999987 899999999999999999999
Q ss_pred EecCCCCcccccccccc----------cCCCCCCcc--cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc
Q 004232 634 LSDYGLSIVSEDINSVG----------GKQEDPNSW--EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS 701 (766)
Q Consensus 634 l~DFGla~~~~~~~~~~----------~~~~~~~~~--~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (766)
++|||++.......... ...++.... ..++.++||||||+++||+++|..|+..... .........
T Consensus 149 l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~ 226 (272)
T cd06629 149 ISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--IAAMFKLGN 226 (272)
T ss_pred EeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch--HHHHHHhhc
Confidence 99999986543221100 001111011 1256789999999999999999999853221 111111111
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+ .+..... ....+.+++.+||..+|++||+|+||++.
T Consensus 227 ~~~~~~~-~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 227 KRSAPPI-PPDVSMN----LSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccCCcC-Ccccccc----CCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111111 1111111 12347788999999999999999999763
No 241
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=1.5e-31 Score=285.55 Aligned_cols=247 Identities=16% Similarity=0.206 Sum_probs=182.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|+++++.++||||+++++.+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR------ 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC------
Confidence 46888899999999999999854 68899999987543 233467888999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.... .+++.....++.+++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 75 --~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 75 --HLCMVMEYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred --EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 6899999999999999997543 478888889999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc--------------------c---ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH
Q 004232 639 LSIVSEDINS--------------------V---GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE 695 (766)
Q Consensus 639 la~~~~~~~~--------------------~---~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~ 695 (766)
+++....... . ....++.......+.++|||||||++|||++|+.|+..... ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~~~ 224 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EEL 224 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH
Confidence 9863210000 0 00011111123455689999999999999999999863321 111
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
....... ....+...... ...+.+++.+||+.+|++||++.++.+.|+..
T Consensus 225 ~~~~~~~----~~~~~~~~~~~----~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~ 274 (305)
T cd05609 225 FGQVISD----DIEWPEGDEAL----PADAQDLISRLLRQNPLERLGTGGAFEVKQHR 274 (305)
T ss_pred HHHHHhc----ccCCCCccccC----CHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence 1111111 11111111111 12367899999999999999987777777653
No 242
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=3.1e-32 Score=288.67 Aligned_cols=245 Identities=22% Similarity=0.324 Sum_probs=189.0
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|+..+++|+|+||.++..+. .++..+++|.+.... ...++....|+.++++++|||||.+.+.+.+.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~------ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG------ 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC------
Confidence 35688889999999999998874 357789999987544 333557788999999999999999999988764
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...++||+|++||++.+.+.+.+ +..++.......+.|+..|+.|||+. .|+|||||+.||++..+..+|++|||
T Consensus 77 -~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 77 -QLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred -ceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 23899999999999999998765 34577788899999999999999976 79999999999999999999999999
Q ss_pred CCcccccccccc-cCCCCC-------CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSVG-GKQEDP-------NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~~-~~~~~~-------~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+|+......... +..++| ..-..+..|+|+||+||++|||++=+++|.... ....+.++.. ...+
T Consensus 152 laK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~--m~~Li~ki~~-----~~~~ 224 (426)
T KOG0589|consen 152 LAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN--MSELILKINR-----GLYS 224 (426)
T ss_pred hhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc--hHHHHHHHhh-----ccCC
Confidence 998865443111 111122 223567889999999999999999999987433 2222222221 1122
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
|.. . .....+..++..|++.+|..||++.+++.+
T Consensus 225 Plp-~----~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 PLP-S----MYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCC-c----cccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 211 1 112336788899999999999999999987
No 243
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.98 E-value=1.7e-31 Score=278.37 Aligned_cols=248 Identities=19% Similarity=0.292 Sum_probs=183.2
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||++.. .++..||+|.++.. .....+++..|++++++++||||+++++++....+ .
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~------~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSN------Q 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCC------C
Confidence 477788999999999999985 46889999988643 23445678899999999999999999998875431 3
Q ss_pred eEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 561 KVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGV--IPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..+++|||+++|+|.+++... .....+++.....++.+++.|++|||... ..+++||||||+||++++++.+|++||
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~ 154 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecc
Confidence 579999999999999998653 22345899999999999999999999321 238999999999999999999999999
Q ss_pred CCCcccccccc-c----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINS-V----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~-~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++........ . + ..+++.......+.++||||||+++|||++|+.|+..... ......+. ......
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~-~~~~~~-- 229 (265)
T cd08217 155 GLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIK-EGKFRR-- 229 (265)
T ss_pred cccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHh-cCCCCC--
Confidence 99876543221 0 0 0111111122345678999999999999999999864331 11111111 111111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. +......+.+++.+|++.+|++||++.+|+++
T Consensus 230 ---~----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 230 ---I----PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---C----ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1 11122347789999999999999999999864
No 244
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.98 E-value=8.8e-32 Score=293.83 Aligned_cols=256 Identities=17% Similarity=0.205 Sum_probs=180.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|+..+.||+|+||.||++.. ..++.||||++... .....+.+.+|+.+++.++||||+++++++.......
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~-- 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE-- 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc--
Confidence 456899999999999999999985 46889999998653 2334567888999999999999999999886543111
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++||||+++ ++.+.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeC
Confidence 12357999999976 56666542 377888889999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---------
Q 004232 638 GLSIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS--------- 701 (766)
Q Consensus 638 Gla~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~--------- 701 (766)
|+++........ + +..++......++.++|||||||++|||++|+.||...... ..+..+..
T Consensus 164 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 164 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI--DQWNKVIEQLGTPCPEF 241 (355)
T ss_pred cccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHH
Confidence 999754322111 1 01111111234566899999999999999999998643211 11100000
Q ss_pred -------------c-cCccccccccc-----cC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 -------------Q-EGRQRLVDPVV-----MA---TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 -------------~-~~~~~~~d~~~-----~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. .....+..+.. .. .........+.+++.+|++.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0 00000000000 00 0000112346799999999999999999999975
No 245
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.98 E-value=1.5e-31 Score=288.36 Aligned_cols=233 Identities=19% Similarity=0.279 Sum_probs=167.5
Q ss_pred CceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHH-HHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRL-DLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~-~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||+||+|+.. +++.||+|++.... ....+.+..|. .+++.++||||+++++++.+.+ ..+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~--------~~~ 72 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD--------KLY 72 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC--------eEE
Confidence 36899999999999864 67889999986532 12233444444 4577899999999999887653 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|.+++.... .+.......++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 73 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 73 FVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 9999999999999887543 366777788999999999999997 8999999999999999999999999998643
Q ss_pred ccccc-c---ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINS-V---GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~-~---~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
..... . .++ .++......++.++|||||||++|||++|+.||..... ...+..+.... .. ..+.
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~--~~-~~~~--- 218 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNKP--LQ-LKPN--- 218 (325)
T ss_pred ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--HHHHHHHHhCC--cC-CCCC---
Confidence 21110 0 011 11111123456689999999999999999999864322 22222221111 00 1111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+ ..+.+++.+|++.||.+||+..+.+.
T Consensus 219 -~~----~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 219 -IT----NSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred -CC----HHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 11 23678889999999999998875443
No 246
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.98 E-value=2.2e-31 Score=278.16 Aligned_cols=248 Identities=21% Similarity=0.346 Sum_probs=184.1
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||.|+||.||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-------- 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC--------
Confidence 4688899999999999999985 468899999986533 235678999999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+++++|.++++...+...+++.....++.+++.|++|||+. +++||||||+||++++++.+|++|||++
T Consensus 73 ~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 73 ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 7899999999999999997654334588999999999999999999987 8999999999999999999999999998
Q ss_pred cccccccccc--------c----CCCCCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 641 IVSEDINSVG--------G----KQEDPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 641 ~~~~~~~~~~--------~----~~~~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
.......... + ..++... ....+.++|||||||++|||++|+.|+..... ........... ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~~~~-~~~ 226 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP--MKVLMLTLQND-PPS 226 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh--hhhHHHHhcCC-CCC
Confidence 5543221110 0 0011011 12456689999999999999999999864321 11111111110 001
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+.... ........+.+++.+||+.||++||++.||++
T Consensus 227 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 227 LETGA----DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cCCcc----ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 10000 00011234678999999999999999999975
No 247
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.98 E-value=1e-31 Score=286.37 Aligned_cols=253 Identities=19% Similarity=0.227 Sum_probs=178.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|.+.+.||+|+||.||+|+.. +++.||+|.++... ......+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-------- 77 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-------- 77 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC--------
Confidence 46888899999999999999864 68899999986433 223456778999999999999999999988653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++ ++|.+++.+.. ..+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||++
T Consensus 78 ~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 78 SLTLVFEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred eEEEEEeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 6899999998 58988886543 3478888999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc-----ccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhh----------
Q 004232 641 IVSEDINSV-----GGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLN---------- 700 (766)
Q Consensus 641 ~~~~~~~~~-----~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~---------- 700 (766)
......... .... ..|.. ....+.++|||||||++|||+||+.||....... ...+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 152 RAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred hccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence 643221110 0000 01111 1224557899999999999999999986432211 11111100
Q ss_pred --cccCccccccccccCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 701 --SQEGRQRLVDPVVMATS----SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 701 --~~~~~~~~~d~~~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........-.+...... .......+.+++.+|++.||.+|||++||++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 232 ILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000000001000000 00012246789999999999999999999863
No 248
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.98 E-value=2.7e-31 Score=281.07 Aligned_cols=254 Identities=19% Similarity=0.235 Sum_probs=184.0
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|+..+.||.|+||.||+|.. .+++.+|+|.+.... .....++.+|++++++++||||++++++|.+... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~------~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESS------S 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC------C
Confidence 3577889999999999999996 468899999987543 2445778999999999999999999999876431 3
Q ss_pred eEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
.+++||||+++|+|.+++.... ....+++.....++.+++.||+|||+. +++||||+|+||++++++.+||+|||+
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeeccc
Confidence 6899999999999998875422 223478888999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccc------cccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc---chHHHHhhhhcccCcccccc
Q 004232 640 SIVSEDINS------VGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ---FLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 640 a~~~~~~~~------~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~---~~~~~~~~~~~~~~~~~~~d 710 (766)
+........ .....++......++.++|||||||++|||+||+.|+..... ...+....+... ....+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 230 (287)
T cd06621 152 SGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKD 230 (287)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-Cchhhcc
Confidence 854322110 011111111223456789999999999999999999874421 111111111110 0111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... . .......+.+++.+||+.+|.+||||.||++.
T Consensus 231 ~~~-~--~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 231 EPG-N--GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CCC-C--CCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 100 0 00112347799999999999999999999874
No 249
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.98 E-value=1.8e-31 Score=288.35 Aligned_cols=246 Identities=18% Similarity=0.281 Sum_probs=176.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+++.. +++.||||++.... ....+.+.+|+.++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN------ 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC------
Confidence 46888999999999999999854 68999999986422 233456888999999999999999999888653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. ..+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 --~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 75 --NLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred --eEEEEEecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 7899999999999999997532 2478888889999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc------ccCC-CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 639 LSIVSEDINSV------GGKQ-EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 639 la~~~~~~~~~------~~~~-~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
++......... +... ..|.. ...++.++|||||||++|||++|+.||.... ..+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~--~~~~~~~i~~~~~ 225 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHKE 225 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCC--HHHHHHHHHcCCC
Confidence 98543221110 1100 01111 1234568999999999999999999986432 1222222221111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhcc--CCCCCCCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCIC--SESWSRPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~--~~p~~RPs~~ev~~~ 749 (766)
...+.+. ....+. .+.+++.+|+. .++..||+++++++.
T Consensus 226 ~~~~~~~--~~~~~~----~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 226 HFQFPPD--VTDVSE----EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred cccCCCc--cCCCCH----HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1111111 111122 24556666554 444458899888766
No 250
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=1.2e-31 Score=283.80 Aligned_cols=257 Identities=19% Similarity=0.215 Sum_probs=175.6
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhC---CCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l---~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+|++.+.||+|+||+||+|+.. +++.||+|.++... ......+.+|+++++++ +||||+++++++.+....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~--- 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD--- 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC---
Confidence 3777889999999999999854 68999999886532 11233456677766655 799999999988754211
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++||||+++ +|..++.... ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 78 RETKVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred CCceEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 11358999999985 8888886543 23488999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhccc----Cc
Q 004232 638 GLSIVSEDINSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQE----GR 705 (766)
Q Consensus 638 Gla~~~~~~~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~----~~ 705 (766)
|++......... ....++......++.++|||||||++|||++|++||...... ....+....... ..
T Consensus 153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 153 GLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred CccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence 998654322111 011111112234567899999999999999999988643221 111111110000 00
Q ss_pred c------ccccccccC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 Q------RLVDPVVMA---TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~------~~~d~~~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ....+.... ....+....+.+++.+|++.||++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 000000000 000011234678999999999999999999874
No 251
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=2.7e-31 Score=277.49 Aligned_cols=242 Identities=21% Similarity=0.286 Sum_probs=177.7
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC-----hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS-----KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|++.+.||+|+||.||+|+. .+|..||||.+... .....+.+.+|+.++++++||||+++++++.+...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME--- 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC---
Confidence 4688899999999999999985 46899999987532 12335678899999999999999999998766431
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..+++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 79 ---~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 ---RTLSIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ---ceEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 35789999999999999987543 377888899999999999999987 899999999999999999999999
Q ss_pred CCCCccccccc-------cc----ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDIN-------SV----GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~-------~~----~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||++....... .. .+..++.......+.++|||||||++|||++|+.|+..... ...........
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~-- 225 (265)
T cd06652 150 FGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA--MAAIFKIATQP-- 225 (265)
T ss_pred CccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch--HHHHHHHhcCC--
Confidence 99986432110 00 01111111122345678999999999999999999863211 11111111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+.. +......+.+++.+|+. +|++||+++||++
T Consensus 226 ---~~~~~----~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 ---TNPVL----PPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ---CCCCC----chhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 01111 11222346678888985 8999999999875
No 252
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=2.3e-31 Score=289.09 Aligned_cols=259 Identities=17% Similarity=0.307 Sum_probs=180.5
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|+..+.||+|+||.||+|+. .++..||||++.... ....+.+.+|++++++++||||+++++++.......
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 90 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE-- 90 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc--
Confidence 456788899999999999999985 578899999987532 233456778999999999999999999886543111
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++++|++ +++|.+++... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 123579999988 77898877532 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc--ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccC------
Q 004232 638 GLSIVSEDINSV--GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEG------ 704 (766)
Q Consensus 638 Gla~~~~~~~~~--~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~------ 704 (766)
|+++........ +... ..|. ....++.++|||||||++|||++|+.||...... ....+........
T Consensus 163 g~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 163 GLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred ccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 998754332111 1100 1111 1133566899999999999999999998643211 0111110000000
Q ss_pred -----cccccccc-ccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 -----RQRLVDPV-VMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 -----~~~~~d~~-~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........ ....... .....+.+++.+|++.||.+|||+.|++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 0000000 011236789999999999999999999865
No 253
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=3.3e-31 Score=278.90 Aligned_cols=238 Identities=19% Similarity=0.344 Sum_probs=179.7
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
|+..+.||+|+||.||+|.. .++..||+|...... ....+.+.+|+.++++++||||+++++++.+.. ..
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--------~~ 77 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT--------KL 77 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC--------eE
Confidence 66678899999999999985 468899999876433 334567889999999999999999999988753 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++... .+++.....++.+++.|++|||+. +++|+||||+||+++.++.++++|||++..
T Consensus 78 ~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06641 78 WIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQ 150 (277)
T ss_pred EEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeeccccee
Confidence 9999999999999988642 378999999999999999999997 899999999999999999999999999865
Q ss_pred ccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 643 SEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 643 ~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
....... + ...++.......+.++|||||||++|||++|..|+...... .....+.. ... +...
T Consensus 151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-~~~-----~~~~ 222 (277)
T cd06641 151 LTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPK-NNP-----PTLE 222 (277)
T ss_pred cccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhc-CCC-----CCCC
Confidence 4322110 0 01111111233456789999999999999999998632211 11111111 111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ...+.+++.+||+.+|.+||+|.++++.
T Consensus 223 ~~~----~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 223 GNY----SKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccc----CHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111 2336788999999999999999999985
No 254
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=1.3e-31 Score=282.66 Aligned_cols=258 Identities=21% Similarity=0.355 Sum_probs=186.7
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeec
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCID 550 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~ 550 (766)
.++.++..+.+.|++.+.||+|+||.||+|+. .+++.||+|.+.... ....++..|+.+++++ +||||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 34566666778899999999999999999986 468899999886543 2345688899999998 69999999999865
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
.... ......+++|||+++|+|.+++.... ...+++.....++.|++.|++|||+. +|+||||||+||++++++
T Consensus 85 ~~~~--~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 85 KSPP--GHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccc--CCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 3210 01246899999999999999886543 23477888889999999999999997 899999999999999999
Q ss_pred cEEEecCCCCccccccccc--------ccCCCCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHh
Q 004232 631 IAKLSDYGLSIVSEDINSV--------GGKQEDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELD 697 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~--------~~~~~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~ 697 (766)
.+||+|||++......... .+.+++... ...++.++|||||||++|||+||+.|+...... ....
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~--~~~~ 236 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM--RALF 236 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH--hhhh
Confidence 9999999998643221100 011111100 123455799999999999999999998532211 1111
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+.. .. .+.... ......+.+++.+||..||.+||++.||++
T Consensus 237 ~~~~-~~-----~~~~~~---~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 LIPR-NP-----PPKLKS---KKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hHhh-CC-----CCCCcc---cccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1100 00 010000 011234778999999999999999999875
No 255
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=3.4e-31 Score=283.17 Aligned_cols=242 Identities=24% Similarity=0.328 Sum_probs=179.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..|+..+.||+|+||.||+|+.. +++.||+|++.... ....+++.+|++++++++||||++++|+|.+.+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~------ 88 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH------ 88 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC------
Confidence 34777889999999999999864 68999999886432 234567889999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++|+||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||
T Consensus 89 --~~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 89 --TAWLVMEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred --eEEEEHHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 6899999998 57766665332 2488999999999999999999987 89999999999999999999999999
Q ss_pred CCcccccccccccCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 639 LSIVSEDINSVGGKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 639 la~~~~~~~~~~~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
++............. ..|.. ....+.++|||||||++|||+||+.|+...... .....+...+ . +
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--~~~~~~~~~~-~-----~ 232 (307)
T cd06607 161 SASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQND-S-----P 232 (307)
T ss_pred cceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--HHHHHHhcCC-C-----C
Confidence 986543322111110 11111 123556899999999999999999998633211 1111111100 0 0
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ........+.+++.+||+.+|++||+|.+|+..
T Consensus 233 ~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 233 TL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00 011122347889999999999999999999874
No 256
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.4e-31 Score=293.27 Aligned_cols=255 Identities=17% Similarity=0.221 Sum_probs=179.3
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+++. ..++.||||++... .....+.+.+|+.+++.++||||+++++++....... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~--~ 100 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE--E 100 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc--c
Confidence 46789999999999999999985 46889999998653 2334567888999999999999999999876542110 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++||||+++ ++...+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 1357999999986 67666642 277888899999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc---------
Q 004232 639 LSIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ--------- 702 (766)
Q Consensus 639 la~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~--------- 702 (766)
+++........ + +..++......++.++|||||||++|||++|+.||...... ..+..+...
T Consensus 172 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 172 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred CccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHH
Confidence 99754332111 0 01111111234566899999999999999999998643221 111111000
Q ss_pred --------------cCcc-----cccccccc---CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 --------------EGRQ-----RLVDPVVM---ATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 --------------~~~~-----~~~d~~~~---~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.... +....... ..........+.+++.+|++.||.+|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000 00000000 00000112346799999999999999999999875
No 257
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=3.2e-31 Score=275.30 Aligned_cols=242 Identities=26% Similarity=0.458 Sum_probs=181.3
Q ss_pred CCcCCceecCCceeEEEEEecC-----CceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLEN-----GTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|++.+.||+|+||.||+++... +..||+|.+...... ..+.+..|+.++++++||||+++++++.+.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE------ 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC------
Confidence 3456889999999999998653 488999999765433 5678999999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..+++|||+++++|.+++..... ..+++..+..++.+++.|++|||+. +++||||||+||++++++.+|++|||
T Consensus 75 --~~~~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 75 --PLMIVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred --eeEEEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 68999999999999999875432 1278999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccccc---------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccc
Q 004232 639 LSIVSEDINSVGG---------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 639 la~~~~~~~~~~~---------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
++........... ..++.......+.++||||+||+++||++ |..|+..... ......+.. .....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~-~~~~~- 224 (258)
T smart00219 149 LSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKK-GYRLP- 224 (258)
T ss_pred CceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhc-CCCCC-
Confidence 9865433211110 01111112345678999999999999999 7777753221 111111111 11111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
.+. . ....+.+++.+|+..+|++|||+.|+++.|
T Consensus 225 -~~~---~----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 -KPE---N----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCC---c----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 111 1 123477899999999999999999998764
No 258
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.9e-31 Score=291.08 Aligned_cols=185 Identities=18% Similarity=0.314 Sum_probs=147.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
...+|++.+.||+|+||.||+|+.. ++..||+|..... ....|+.++++++||||+++++++.+..
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 130 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGA------- 130 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCC-------
Confidence 3457999999999999999999865 5788999975432 2346889999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+. |+|.+++.... ..++|..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 131 -~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 131 -ITCMVLPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred -eeEEEEEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcc
Confidence 6799999995 68888886532 3589999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 640 SIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 640 a~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
++........ + +..++......++.++|||||||++|||+++..++
T Consensus 204 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 204 AQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 8653221110 1 11122122234567899999999999999976554
No 259
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=2.4e-31 Score=280.56 Aligned_cols=246 Identities=22% Similarity=0.364 Sum_probs=176.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHH-HHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~-l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+.. +|+.||+|+++... .....++..|+.+ ++..+||||+++++++...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~------- 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG------- 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC-------
Confidence 46888899999999999999864 69999999987542 2233445556654 66779999999999997653
Q ss_pred ceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||++ |+|.+++... .....+++.....++.|++.||+|||++. +++||||||+||+++.++.+||+|||
T Consensus 74 -~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 74 -DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred -cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecc
Confidence 6899999997 6888777542 22345889999999999999999999852 78999999999999999999999999
Q ss_pred CCccccccccc----ccCC-CCCCcc------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 639 LSIVSEDINSV----GGKQ-EDPNSW------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 639 la~~~~~~~~~----~~~~-~~~~~~------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
++......... +... ..|... ...+.++|||||||++|||++|+.|+....... ........ .....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~-~~~~~ 227 (283)
T cd06617 150 ISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF-QQLKQVVE-EPSPQ 227 (283)
T ss_pred cccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCH-HHHHHHHh-cCCCC
Confidence 98654321110 1100 111111 234568999999999999999999986322111 11111111 11111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+... ..+ ..+.+++.+||+.+|++||++.+|+..
T Consensus 228 ~~~~----~~~----~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 228 LPAE----KFS----PEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCcc----ccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111 111 236789999999999999999999863
No 260
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=4.9e-31 Score=273.75 Aligned_cols=241 Identities=17% Similarity=0.273 Sum_probs=180.6
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||++.. .+++.+|||.+.... ....+.+.+|++++++++||||+++++.+... +
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~--------~ 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLED--------K 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecC--------C
Confidence 477788999999999999985 478899999986542 33457789999999999999999999987754 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DFGl 639 (766)
..++||||+++++|.+++.+.. ...+++..+..++.+++.|++|||+. +++||||||+||+++++ +.+|++|||+
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 73 ALMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 6899999999999999997643 23578999999999999999999997 89999999999999854 5689999999
Q ss_pred Cccccccccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 640 SIVSEDINSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 640 a~~~~~~~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
+......... ....++.......+.++|||||||++|||++|+.|+..... ......... .....+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~-- 223 (256)
T cd08220 149 SKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--PALVLKIMS-GTFAPISD-- 223 (256)
T ss_pred ceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--HHHHHHHHh-cCCCCCCC--
Confidence 8654332111 11112211223356689999999999999999999864322 111111111 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ....+.+++.+||+.+|++||++.|+++
T Consensus 224 ---~----~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 ---R----YSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---C----cCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1 1123678899999999999999999975
No 261
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=309.67 Aligned_cols=253 Identities=21% Similarity=0.409 Sum_probs=190.2
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceee
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCI 549 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~ 549 (766)
...++..+.+.+|+|.||.|++|... ....||||.++... ....+.+..|+++|+.+ +|||||.++|+|.
T Consensus 293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 33444555679999999999999742 14579999997643 35578899999999998 5999999999999
Q ss_pred cCCCCCCcCcceEEEEEEccCCCChhhhhhcCC-------C----C--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 004232 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-------P----G--KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFN 616 (766)
Q Consensus 550 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------~----~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 616 (766)
..+ ..++|+||+++|+|..++++.+ . . ..++..+.+.++.|||.||+||++. ++||
T Consensus 373 ~~~--------~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vH 441 (609)
T KOG0200|consen 373 QDG--------PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVH 441 (609)
T ss_pred cCC--------ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccc
Confidence 843 6899999999999999998765 0 0 2378889999999999999999997 7899
Q ss_pred CCCCCCceEEcCCCcEEEecCCCCcccccc--cc-cccCCCCCCccc--------CCCCCCCEeehhHHHHHHhc-CCCc
Q 004232 617 NRVKTNNILLNEHRIAKLSDYGLSIVSEDI--NS-VGGKQEDPNSWE--------MTKLEDDVFSFGFMLLESVA-GPSV 684 (766)
Q Consensus 617 rdlk~~NILld~~~~~kl~DFGla~~~~~~--~~-~~~~~~~~~~~~--------~~~~~~DV~SfGvil~Ellt-G~~p 684 (766)
|||.++|||+.++..+||+|||+|+..... .. ....+..|..|. .++.++|||||||+|||++| |..|
T Consensus 442 RDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P 521 (609)
T KOG0200|consen 442 RDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP 521 (609)
T ss_pred hhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence 999999999999999999999999753321 11 111111344443 45679999999999999999 5677
Q ss_pred cccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 685 AARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
+.. ......+.+....+. ++..|. .+..++.++++.||+.+|++||+|.|+++.++...
T Consensus 522 Yp~--~~~~~~l~~~l~~G~--r~~~P~-------~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 522 YPG--IPPTEELLEFLKEGN--RMEQPE-------HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCC--CCcHHHHHHHHhcCC--CCCCCC-------CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 753 110111111222221 111121 22344789999999999999999999999998853
No 262
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=5.7e-31 Score=274.57 Aligned_cols=242 Identities=19% Similarity=0.339 Sum_probs=180.6
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.|+..+.||+|+||.||+|... ++..||+|.++.... ...+.+.+|++++++++|+||+++++++... +
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~--------~ 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR--------E 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC--------C
Confidence 3677789999999999999864 688999999875543 3678899999999999999999999987765 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+++++|.+++.+.. .+++..+..++.+++.|++|||+. +++||||||+||++++++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 73 KVYIFMEYCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEEEEecCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 7899999999999999987542 378888999999999999999997 8999999999999999999999999998
Q ss_pred cccccccccc------------cCCCCCCccc---CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 641 IVSEDINSVG------------GKQEDPNSWE---MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 641 ~~~~~~~~~~------------~~~~~~~~~~---~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
.......... ...++..... ..+.++||||||+++||+++|+.||........ ....+.. ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~-~~~~~~~-~~~ 224 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ-IMFHVGA-GHK 224 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH-HHHHHhc-CCC
Confidence 6543221110 0111111111 256689999999999999999999864321111 1111111 111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+.+ .. .....+.+++.+||+.+|.+||++.|++.
T Consensus 225 ~~~~~-----~~--~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 PPIPD-----SL--QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCc-----cc--ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111 00 01223568899999999999999999864
No 263
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=2.5e-31 Score=282.19 Aligned_cols=242 Identities=20% Similarity=0.338 Sum_probs=182.4
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
++|+..+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++||||++++++|...+ .
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--------~ 90 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD--------E 90 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC--------c
Confidence 5688889999999999999984 468899999987555555677889999999999999999999988753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||+++|+|.+++.+. .+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 91 LWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEEEEecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 89999999999999998653 378899999999999999999997 89999999999999999999999999875
Q ss_pred ccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
......... ...++.......+.++|||||||++||+++|+.||...... .....+.. .......
T Consensus 164 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~--~~~~~~~~-~~~~~~~---- 236 (293)
T cd06647 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLIAT-NGTPELQ---- 236 (293)
T ss_pred cccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh--hheeehhc-CCCCCCC----
Confidence 433211110 01111111233456899999999999999999998643221 11110100 0000000
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........+.+++.+||+.+|++||++++++.+
T Consensus 237 ---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011112346789999999999999999999876
No 264
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=2.4e-31 Score=282.20 Aligned_cols=237 Identities=20% Similarity=0.316 Sum_probs=177.4
Q ss_pred CCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 488 SAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
...||+|+||.||++.. .++..||||.+........+.+.+|+.++++++||||+++++.+...+ ..++||
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~--------~~~lv~ 98 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD--------ELWVVM 98 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC--------eEEEEE
Confidence 45799999999999985 468899999987665556677899999999999999999999987653 689999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++++|.+++... .+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 99 e~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (292)
T cd06658 99 EFLEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 171 (292)
T ss_pred eCCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence 999999999988542 378899999999999999999997 8999999999999999999999999998543221
Q ss_pred ccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCC
Q 004232 647 NSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSS 718 (766)
Q Consensus 647 ~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 718 (766)
... + ...++.......+.++|||||||++|||++|+.|+...... .....+.. .....+.+..
T Consensus 172 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~~~------ 242 (292)
T cd06658 172 VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIRD-NLPPRVKDSH------ 242 (292)
T ss_pred cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-cCCCcccccc------
Confidence 110 0 01111111123456899999999999999999998643221 11111110 0001111100
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 719 LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 719 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+.+++.+||+.||.+|||++||++.
T Consensus 243 -~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 243 -KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred -ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011236688899999999999999999865
No 265
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.97 E-value=3.5e-31 Score=286.04 Aligned_cols=246 Identities=17% Similarity=0.269 Sum_probs=177.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+++.. +++.||+|.+.... ....+.+.+|+.++..++|+||+++++++.+.+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~------ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN------ 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC------
Confidence 46888999999999999999864 68899999986532 223456788999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..|+||||+++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 75 --~~~lv~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 75 --YLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred --EEEEEEeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 7899999999999999997632 2478888889999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc-----ccCC--CCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 639 LSIVSEDINSV-----GGKQ--EDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 639 la~~~~~~~~~-----~~~~--~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
+++........ .++. ..|... ..++.++|||||||++|||++|+.||..... ......+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--~~~~~~i~~~~~ 225 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--VETYGKIMNHEE 225 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--HHHHHHHHcCCC
Confidence 98654321110 0110 011111 2345689999999999999999999864322 122222221111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWS--RPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~ 749 (766)
..++ |...... ...+.+++.+|++.++++ |++++++.+.
T Consensus 226 ~~~~--p~~~~~~----~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 226 RFQF--PSHITDV----SEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cccC--CCccccC----CHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1111 1111111 123667888888765544 5678888654
No 266
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.1e-31 Score=296.99 Aligned_cols=183 Identities=20% Similarity=0.289 Sum_probs=146.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
..|.+.+.||+|+||.||+|+.. .++.||||... ...+.+|++++++++|||||++++++...+ .
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~--------~ 234 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGG--------L 234 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC--------E
Confidence 46888999999999999999865 57889999642 234568999999999999999999988753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+. |+|..++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 235 ~~lv~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~ 308 (461)
T PHA03211 235 TCLVLPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAAC 308 (461)
T ss_pred EEEEEEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCce
Confidence 799999995 68888886532 3589999999999999999999997 89999999999999999999999999986
Q ss_pred cccccccc-------cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 642 VSEDINSV-------GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 642 ~~~~~~~~-------~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
........ ++ ..++......++.++|||||||++|||++|..++
T Consensus 309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 54321110 00 0111111234567899999999999999987654
No 267
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=5.6e-31 Score=275.41 Aligned_cols=242 Identities=17% Similarity=0.278 Sum_probs=179.3
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS---- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC----
Confidence 467788999999999999984 578999999986432 123567899999999999999999999988753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEe
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLS 635 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~ 635 (766)
..++|+||+++++|.+++.+.. .+++.....++.+++.||+|||+. +++||||||+||+++.++ .+||+
T Consensus 77 ----~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 77 ----HFNLFVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred ----eEEEEEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 6899999999999999987543 478899999999999999999997 899999999999998775 69999
Q ss_pred cCCCCccccccccc------------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcc
Q 004232 636 DYGLSIVSEDINSV------------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQ 702 (766)
Q Consensus 636 DFGla~~~~~~~~~------------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~ 702 (766)
|||.+......... ....++.......+.++||||+||++|||++|..|+...... ....+......
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (268)
T cd06630 147 DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA 226 (268)
T ss_pred ccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc
Confidence 99998554321100 011111111134456899999999999999999998632211 11111111100
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. .+ ..+......+.+++.+|++.+|++||++.|+++
T Consensus 227 ~~-----~~----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 227 TT-----AP----SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CC-----CC----CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00 01 111112234778999999999999999999874
No 268
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.97 E-value=4.3e-31 Score=285.49 Aligned_cols=246 Identities=19% Similarity=0.291 Sum_probs=176.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+++.. +++.+|+|.+.... ....+.+.+|+.++..++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN------ 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC------
Confidence 46888899999999999999865 57889999986432 223455888999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 75 --~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 75 --NLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred --EEEEEEeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 7899999999999999997632 2478888889999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc------cccCC-CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 639 LSIVSEDINS------VGGKQ-EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 639 la~~~~~~~~------~~~~~-~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
++........ .+... ..|.. ...++.++|||||||++|||++|+.||.... .......+.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~--~~~~~~~i~~~~~ 225 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHKE 225 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCc
Confidence 9854321111 01100 11111 1235668999999999999999999986432 2222222221111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCC--CCCCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSES--WSRPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p--~~RPs~~ev~~~ 749 (766)
...+ |......+ ..+.+++.+|+..++ ..||++.|+++.
T Consensus 226 ~~~~--p~~~~~~s----~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 226 RFQF--PAQVTDVS----EDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cccC--CCccccCC----HHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1111 11111111 235667777765544 447899988766
No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=3.6e-31 Score=276.37 Aligned_cols=245 Identities=20% Similarity=0.294 Sum_probs=183.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|+..+.||+|+||.||++... +++.||+|.+.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------- 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-------- 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC--------
Confidence 35777889999999999999865 68999999987543 344577889999999999999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+++++|.+++.... ..++......++.+++.|++|+|+ . +++||||||+||++++++.+||+|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 73 DISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 7899999999999999987643 357888889999999999999998 5 899999999999999999999999999
Q ss_pred Ccccccccc------cccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCc---cchHHHHhhhhcccCcccccc
Q 004232 640 SIVSEDINS------VGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKG---QFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 640 a~~~~~~~~------~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~---~~~~~~~~~~~~~~~~~~~~d 710 (766)
+........ .....++......++.++|||||||++|||++|+.|+.... .........+.... .
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~----- 221 (265)
T cd06605 148 SGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-P----- 221 (265)
T ss_pred chhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-C-----
Confidence 854322111 01111111122345678999999999999999999986432 11112121111110 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+... .......+.+++.+||..+|.+||++.|++..
T Consensus 222 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 222 PRLP---SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCC---hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0000 00022346789999999999999999999754
No 270
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=4.1e-31 Score=283.88 Aligned_cols=188 Identities=18% Similarity=0.319 Sum_probs=143.1
Q ss_pred CCceecCCceeEEEEEec---CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
...||+|+||+||+|+.. +++.||+|.+..... ...+.+|++++++++||||+++++++.+... ...++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~~~l 77 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHAD------RKVWL 77 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCC------cEEEE
Confidence 468999999999999854 467899999865432 3457789999999999999999998875431 36899
Q ss_pred EEEccCCCChhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE----cCCCcEEE
Q 004232 565 VYEFMSNGNFRTHISENT------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHRIAKL 634 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl 634 (766)
||||+.+ +|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07868 78 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEE
Confidence 9999875 7877764321 112478888899999999999999997 89999999999999 45678999
Q ss_pred ecCCCCcccccccc-------cccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 635 SDYGLSIVSEDINS-------VGGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 635 ~DFGla~~~~~~~~-------~~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
+|||+++....... ..++. ..|.. ...++.++||||+||++|||+||+.||..
T Consensus 154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99999965432111 00010 11111 12345678999999999999999999853
No 271
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=5e-31 Score=280.52 Aligned_cols=252 Identities=18% Similarity=0.292 Sum_probs=180.3
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhh-----hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY-----TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+|+..+.||+|+||.||+|... +|+.||||.+...... ....+..|++++++++||||+++++++.+.
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------ 74 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHK------ 74 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecC------
Confidence 3677789999999999999864 6899999999754322 245567899999999999999999999874
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
+..++||||+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+||
T Consensus 75 --~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 75 --SNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred --CEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 3689999999 999999997543 2589999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccccc--------CCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHH-hhhhcc----
Q 004232 638 GLSIVSEDINSVGG--------KQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEEL-DSLNSQ---- 702 (766)
Q Consensus 638 Gla~~~~~~~~~~~--------~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~-~~~~~~---- 702 (766)
|++........... ..++.. .....+.++|||||||++|||++|.+++....... .... ......
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (298)
T cd07841 147 GLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEEN 226 (298)
T ss_pred eeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhh
Confidence 99865432211100 001100 11234567899999999999999977765332211 1111 000000
Q ss_pred ----cCccccccccccCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 ----EGRQRLVDPVVMATSS-----LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 ----~~~~~~~d~~~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
................ ......+.+++.+||+.+|++|||+.||++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 227 WPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0000000000000011 1112457899999999999999999999875
No 272
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=1.7e-31 Score=301.99 Aligned_cols=260 Identities=13% Similarity=0.209 Sum_probs=177.1
Q ss_pred HHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCC------Cccccccee
Q 004232 476 EELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP------HLVCLLGHC 548 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hp------niv~l~g~~ 548 (766)
+++...+++|++.+.||+|+||+||+|.. .+++.||||+++.... ..+++..|++++++++|. +++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 44455678899999999999999999985 4688999999865322 234566788887777654 588888888
Q ss_pred ecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC
Q 004232 549 IDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE 628 (766)
Q Consensus 549 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 628 (766)
.... ...++|||++ +++|.+++.+.. .+++.....++.||+.||+|||+. .+|+||||||+|||++.
T Consensus 201 ~~~~-------~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 201 QNET-------GHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMET 267 (467)
T ss_pred EcCC-------ceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEec
Confidence 7543 3689999988 678888887543 488999999999999999999973 27999999999999987
Q ss_pred CC----------------cEEEecCCCCcccccccc--c---ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 629 HR----------------IAKLSDYGLSIVSEDINS--V---GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 629 ~~----------------~~kl~DFGla~~~~~~~~--~---~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
++ .+||+|||.+........ . .+..++......++.++|||||||++|||+||+.||+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 65 499999998754321111 1 11111111223456688999999999999999999974
Q ss_pred Cccch-HHHHhhhhc-----------c----------cCcccccccccc----CCCC---HHHHHHHHHHHHHhccCCCC
Q 004232 688 KGQFL-QEELDSLNS-----------Q----------EGRQRLVDPVVM----ATSS---LESLSIVISIANKCICSESW 738 (766)
Q Consensus 688 ~~~~~-~~~~~~~~~-----------~----------~~~~~~~d~~~~----~~~~---~~~~~~~~~l~~~C~~~~p~ 738 (766)
..... ...+..... . .......++... .... ...-..+.+|+.+|++.||.
T Consensus 348 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 427 (467)
T PTZ00284 348 HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQ 427 (467)
T ss_pred CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChh
Confidence 33211 111110000 0 000000011000 0000 00123467999999999999
Q ss_pred CCCCHHHHHHH
Q 004232 739 SRPSFEDILWN 749 (766)
Q Consensus 739 ~RPs~~ev~~~ 749 (766)
+|||++|+++.
T Consensus 428 ~R~ta~e~L~H 438 (467)
T PTZ00284 428 KRLNARQMTTH 438 (467)
T ss_pred hCCCHHHHhcC
Confidence 99999999863
No 273
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.8e-31 Score=288.22 Aligned_cols=228 Identities=19% Similarity=0.248 Sum_probs=163.9
Q ss_pred eecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhC---CCCCcccccceeecCCCCCCcCcceEE
Q 004232 491 MGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l---~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
||+|+||+||+|+.. +++.||||++..... .....+..|..++.+. +||||+++++++.+.. ..+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~--------~~~ 72 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS--------DLY 72 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC--------eEE
Confidence 699999999999854 689999999864322 2233445566666655 6999999999887653 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+||||+++|+|..++.+.. .+++.....++.||++||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 73 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 73 LVTDYMSGGELFWHLQKEG---RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEEcCCCCChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999999887543 378889999999999999999997 8999999999999999999999999998643
Q ss_pred ccccc----cccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 644 EDINS----VGGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 644 ~~~~~----~~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
..... ..++. ..|. ....++.++|||||||++|||+||+.||..... ...+..+.... ..+...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--~~~~~~i~~~~--~~~~~~--- 219 (330)
T cd05586 147 LTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--QQMYRNIAFGK--VRFPKN--- 219 (330)
T ss_pred CCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--HHHHHHHHcCC--CCCCCc---
Confidence 21111 00111 1111 112356789999999999999999999864321 12122221111 111111
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFE 744 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ 744 (766)
..+ ..+.+++.+|++.||.+||++.
T Consensus 220 -~~~----~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 220 -VLS----DEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred -cCC----HHHHHHHHHHcCCCHHHCCCCC
Confidence 011 2356889999999999999543
No 274
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=2.8e-31 Score=282.40 Aligned_cols=238 Identities=21% Similarity=0.308 Sum_probs=177.5
Q ss_pred cCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEE
Q 004232 487 MSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
....||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+ ..++|
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~--------~~~iv 96 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE--------ELWVL 96 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC--------eEEEE
Confidence 345799999999999985 468999999987554445667889999999999999999999988753 68999
Q ss_pred EEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccc
Q 004232 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSED 645 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~ 645 (766)
+||+++++|..++... .+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 97 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~ 169 (297)
T cd06659 97 MEFLQGGALTDIVSQT----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 169 (297)
T ss_pred EecCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccc
Confidence 9999999999877542 378999999999999999999987 899999999999999999999999999854322
Q ss_pred cccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCC
Q 004232 646 INSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATS 717 (766)
Q Consensus 646 ~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 717 (766)
.... + ...++.......+.++|||||||++|||++|+.|+...... .....+.. ........ ....
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~---~~~~ 243 (297)
T cd06659 170 DVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRD-SPPPKLKN---AHKI 243 (297)
T ss_pred ccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc-cCCCCccc---cCCC
Confidence 1110 0 11111111233566899999999999999999998643221 11111111 00000000 0011
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 718 SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 718 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+.+++.+||+.+|.+||++.+|++.
T Consensus 244 ----~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 244 ----SPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ----CHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1236788999999999999999999884
No 275
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=4.5e-31 Score=279.88 Aligned_cols=253 Identities=18% Similarity=0.235 Sum_probs=176.3
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++++|.+.+.||+|+||.||+|.. .+|..||+|.+..... .....+.+|++++++++|+||+++++++.+.+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~------ 76 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE------ 76 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC------
Confidence 357788899999999999999985 4688999999865432 22346678999999999999999999987653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++|+||+. +++..++.... ..+.+.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 77 --~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 77 --TLTFVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred --eEEEEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 6899999996 67776665432 2367888888999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc-----ccC-CCCCCcc---cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh---------
Q 004232 639 LSIVSEDINSV-----GGK-QEDPNSW---EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN--------- 700 (766)
Q Consensus 639 la~~~~~~~~~-----~~~-~~~~~~~---~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~--------- 700 (766)
+++........ ... ...|... ...+.++|||||||++|||+||+.||...... .+.+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~ 227 (291)
T cd07870 149 LARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV-FEQLEKIWTVLGVPTED 227 (291)
T ss_pred cccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH-HHHHHHHHHHcCCCChh
Confidence 98643221110 000 0111111 12355789999999999999999998643221 11111100
Q ss_pred ------cccC-ccccccccccCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 701 ------SQEG-RQRLVDPVVMATS-----SLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 701 ------~~~~-~~~~~d~~~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.... ............. .......+.+++.+|++.||++|||+.|++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 228 TWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 0000 0000000000000 0001234678899999999999999999864
No 276
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=8.3e-31 Score=277.15 Aligned_cols=245 Identities=22% Similarity=0.349 Sum_probs=186.3
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++.|+..+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++++++|+|++++++++....
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------- 88 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD------- 88 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-------
Confidence 4566888899999999999999976 688999999976544 5577889999999999999999999988763
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+++++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||||+||+++.++.+||+|||+
T Consensus 89 -~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 89 -ELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred -EEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 7899999999999999998653 3589999999999999999999996 899999999999999999999999998
Q ss_pred Cccccccccc--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSV--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~--------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+......... .+..++.......+.++|||||||++|||++|+.|+...... .....+.. .......++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~~ 239 (286)
T cd06614 163 AAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--RALFLITT-KGIPPLKNP 239 (286)
T ss_pred hhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh-cCCCCCcch
Confidence 7543221100 011111111233567899999999999999999998643221 11111111 111111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+.+++.+||+.+|.+||++.+|++.
T Consensus 240 -------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 240 -------EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -------hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0012347789999999999999999999865
No 277
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=4.3e-31 Score=279.97 Aligned_cols=252 Identities=19% Similarity=0.260 Sum_probs=177.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|+..+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------- 76 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-------- 76 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC--------
Confidence 56888899999999999999865 689999999865332 22345678999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++ +|.+++.+.. ..+++.....++.+++.||.|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~lv~e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 77 TLTLVFEYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred eEEEEEecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 78999999985 9999887543 2478889999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc--------ccCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchH--HHH-hhhhcc--cCc-
Q 004232 641 IVSEDINSV--------GGKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ--EEL-DSLNSQ--EGR- 705 (766)
Q Consensus 641 ~~~~~~~~~--------~~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~--~~~-~~~~~~--~~~- 705 (766)
......... ....++.. .....+.++|||||||++|||++|+.|+........ ... ..+... ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 151 RAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred cccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 543211100 00111111 112245678999999999999999999864321110 000 000000 000
Q ss_pred --------cccccccccCC------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 --------QRLVDPVVMAT------SSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 --------~~~~d~~~~~~------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.....+..... ........+.+++.+|++.+|++||++.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 231 GVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000000 00001144678999999999999999999874
No 278
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=1.1e-30 Score=272.36 Aligned_cols=244 Identities=21% Similarity=0.307 Sum_probs=185.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+..+.+++||||+++++++...+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG-------- 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC--------
Confidence 36888899999999999999865 599999999876543 44678999999999999999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+++++|.+++... ..+++..+..++.++++|++|||+ . +++||||+|+||+++.++.+|++|||+
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 73 EISIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred eEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 789999999999999999754 348899999999999999999999 6 899999999999999999999999999
Q ss_pred Ccccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc-chHHHHhhhhcccCcccccc
Q 004232 640 SIVSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ-FLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 640 a~~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~-~~~~~~~~~~~~~~~~~~~d 710 (766)
+.......... +..++.......+.++||||||+++|||+||+.|+..... ........+.. .....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~--- 222 (264)
T cd06623 147 SKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD-GPPPS--- 222 (264)
T ss_pred ceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc-CCCCC---
Confidence 86543221111 0111111123445689999999999999999999865431 11111221111 10111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.... .....+.+++.+||..+|++||++.|+++.
T Consensus 223 --~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 223 --LPAE---EFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCcc---cCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1011 012347788999999999999999999875
No 279
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=4.7e-31 Score=276.73 Aligned_cols=253 Identities=22% Similarity=0.322 Sum_probs=185.1
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++++|++.+.||+|+||.||+|... +++.+|+|.+..... ..+++.+|+.+++++ +||||+++++++.+.... .
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~--~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPP--G 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCC--C
Confidence 35688999999999999999999964 678999999875543 346789999999999 699999999999865310 0
Q ss_pred CcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
.....++||||+++++|.+++.... ....+++.....++.|++.||+|||+. +++||||+|+||++++++.+|++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 1236899999999999999886532 124588999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc--------cCCCCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc
Q 004232 637 YGLSIVSEDINSVG--------GKQEDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 637 FGla~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
||++.......... ...++.. ....++.++|||||||++|||+||+.|+..... ......+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~- 233 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP--MRALFKIPRN- 233 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch--HHHHHHhhcc-
Confidence 99985433211110 0111100 012245679999999999999999999863221 1111111111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+.. .......+.+++.+||..||.+|||+.||++
T Consensus 234 ~~~~~~~-------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 234 PPPTLKS-------PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CCCCCCc-------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0111111 1112234778999999999999999999975
No 280
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=4.2e-31 Score=278.95 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=177.1
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||+|+.. +|+.||||.++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------- 72 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-------- 72 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC--------
Confidence 4778899999999999999864 68999999886432 223457889999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++ ++|..++.... ...+++.....++.+++.||+|||+. +++||||+|+||++++++.+|++|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 73 KLYLVFEFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred cEEEEeeccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 6899999996 68988886543 23588999999999999999999987 8999999999999999999999999998
Q ss_pred cccccccccc--------cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc-ccCcccccc
Q 004232 641 IVSEDINSVG--------GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS-QEGRQRLVD 710 (766)
Q Consensus 641 ~~~~~~~~~~--------~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~-~~~~~~~~d 710 (766)
.......... ...++.. .....+.++|||||||++|||+||+.|+...... .....+.. .+.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07860 148 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVW 225 (284)
T ss_pred hhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhh
Confidence 6442211100 0111111 1122356799999999999999999998643221 11111000 000000000
Q ss_pred -------------ccccCCCCH----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 711 -------------PVVMATSSL----ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 711 -------------~~~~~~~~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+........ .....+.+++.+|++.||++||+++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 226 PGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000 01123568999999999999999999975
No 281
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=9.7e-32 Score=279.61 Aligned_cols=243 Identities=24% Similarity=0.405 Sum_probs=178.5
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhh--HHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYT--VRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~--~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|++.+.||+|+||+||+++.. +++.+|+|.+....... .....+|+.++++++||||+++++++.+.. .
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--------~ 72 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN--------Y 72 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS--------E
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc--------c
Confidence 456789999999999999965 56789999998765433 233456999999999999999999998753 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++++|.+++... ..+++..+..++.++++||+|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 73 ~~~v~~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 73 LYIVMEYCPGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEEEETTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 89999999999999999833 2488999999999999999999997 89999999999999999999999999986
Q ss_pred cc-cccccc---ccC--CCCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCccccccc
Q 004232 642 VS-EDINSV---GGK--QEDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~-~~~~~~---~~~--~~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~ 711 (766)
.. ...... ... ...|.. ....+.++||||+|+++|||++|..|+...... .......... .....+
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~ 222 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK----RPLPSS 222 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH----THHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc----cccccc
Confidence 42 111110 000 011111 234566789999999999999999998754111 1111111110 000000
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...... ....+.+++.+|++.||++||++.|+++
T Consensus 223 ~~~~~~---~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 223 SQQSRE---KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TTSHTT---SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred ccccch---hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000 0145789999999999999999999975
No 282
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=6e-31 Score=282.52 Aligned_cols=188 Identities=18% Similarity=0.314 Sum_probs=142.7
Q ss_pred CCceecCCceeEEEEEec---CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
...||+|+||.||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++..... ...++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~~~~l 77 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSD------RKVWL 77 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCC------CeEEE
Confidence 357999999999999864 457899998865432 3457789999999999999999998875431 36899
Q ss_pred EEEccCCCChhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE----cCCCcEEE
Q 004232 565 VYEFMSNGNFRTHISENT------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHRIAKL 634 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl 634 (766)
|+||+++ +|.+++.... ....+++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||
T Consensus 78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl 153 (317)
T cd07867 78 LFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 153 (317)
T ss_pred EEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEE
Confidence 9999886 6766664221 122478888899999999999999997 89999999999999 45679999
Q ss_pred ecCCCCccccccccc-------ccC--CCCCCc---ccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 635 SDYGLSIVSEDINSV-------GGK--QEDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 635 ~DFGla~~~~~~~~~-------~~~--~~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
+|||+++........ ..+ ...|.. ...++.++|||||||++|||+||+.||..
T Consensus 154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 999999754321110 000 011111 12345678999999999999999999863
No 283
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=5e-31 Score=291.43 Aligned_cols=248 Identities=18% Similarity=0.223 Sum_probs=175.2
Q ss_pred hcCCCcCCceecCCceeEEEEEec---CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..+|++.+.||+|+||.||++... .+..||||.+... +...+|++++++++|||||++++++....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~------ 159 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS------ 159 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC------
Confidence 356899999999999999999753 4678999988643 23567999999999999999999887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 160 --~~~lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 160 --TVCMVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred --EEEEEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 6899999986 5888888433 3489999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc-------cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhc---c-c
Q 004232 639 LSIVSEDINSV-------GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNS---Q-E 703 (766)
Q Consensus 639 la~~~~~~~~~-------~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~---~-~ 703 (766)
++......... ++ ..++......++.++|||||||++|||++|+.|+...... ....+..+.. . .
T Consensus 231 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~ 310 (392)
T PHA03207 231 AACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHP 310 (392)
T ss_pred cccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCc
Confidence 98654321110 10 1111111234566899999999999999999998543211 1111111100 0 0
Q ss_pred -Cc---------------cccccccccCCCC---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 -GR---------------QRLVDPVVMATSS---LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 -~~---------------~~~~d~~~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. .....+....... ......+.+++.+|+..||++||++.|++..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 311 LEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 0000000000000 0001235678899999999999999999876
No 284
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=3e-31 Score=280.07 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=175.6
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||+|+.. +|+.||+|.++... ......+.+|++++++++||||+++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-------- 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-------- 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC--------
Confidence 3677789999999999999864 68999999986432 222356778999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||++ |+|.+++.... ..+++.....++.||++||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 73 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 73 KLTLVFEYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred ceEEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 6899999998 47877776432 3488999999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc-----ccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---cc-----
Q 004232 641 IVSEDINSV-----GGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS---QE----- 703 (766)
Q Consensus 641 ~~~~~~~~~-----~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~---~~----- 703 (766)
+........ .... ..|.. ...++.++|||||||++|||+||+.|+...... ......+.. ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07839 147 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEESW 225 (284)
T ss_pred hccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH-HHHHHHHHHHhCCCChHHh
Confidence 654321110 0000 11111 122456789999999999999998885432211 111111100 00
Q ss_pred -Cccccccc----cccCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 -GRQRLVDP----VVMATSS-----LESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 -~~~~~~d~----~~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
......+. ....... ......+.+++.+|++.||.+|||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 226 PGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00000000 0000000 011234678999999999999999999975
No 285
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=9.9e-32 Score=288.47 Aligned_cols=241 Identities=22% Similarity=0.319 Sum_probs=182.6
Q ss_pred CcCCceecCCceeEEEEEe-cCCceEEEEEccC----ChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 486 DMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPS----SKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~----~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+...+||+|+|-+||||.. .+|..||--.++. ......++|..|+.+|+.|+|||||+++.++.+... .
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n------~ 116 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN------K 116 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC------c
Confidence 3457899999999999974 3577777433321 123445889999999999999999999999887642 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFGl 639 (766)
.+-+|+|.|..|+|+.|..+.+. ++.......++||.+||.|||++ .|||||||||..||+|+. .|.+||+|.||
T Consensus 117 ~in~iTEL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 117 TINFITELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred eeeeeeecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhH
Confidence 68899999999999999987653 67788888999999999999996 478999999999999985 58999999999
Q ss_pred Cccccccc--ccccCCCCC--C-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch--HHHHhhhhcccCcccccccc
Q 004232 640 SIVSEDIN--SVGGKQEDP--N-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL--QEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 640 a~~~~~~~--~~~~~~~~~--~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~--~~~~~~~~~~~~~~~~~d~~ 712 (766)
|....... ++-++++-. . +-+.|....||||||+.|+||+|+..||..-.... ...+.+-.......++.||.
T Consensus 193 Atl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPe 272 (632)
T KOG0584|consen 193 ATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPE 272 (632)
T ss_pred HHHhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHH
Confidence 97654322 222333211 1 22456677899999999999999999997432211 12222223333444555543
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.+++.+|+.. .++|||+.|+++.
T Consensus 273 ------------vr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 273 ------------VREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ------------HHHHHHHHhcC-chhccCHHHHhhC
Confidence 67899999999 9999999999865
No 286
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=8.4e-31 Score=275.63 Aligned_cols=240 Identities=20% Similarity=0.367 Sum_probs=180.2
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCC---CCCcccccceeecCCCCCCcC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLR---HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~---Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.|+..+.||+|+||.||+|.. .++..||+|.+... .....+++.+|++++++++ |||+++++++|.+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~------ 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP------ 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC------
Confidence 466778999999999999995 57899999988643 2344567889999999997 999999999987653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++++|.++++.. .+++.....++.+++.||.|||+. +++||||+|+||++++++.+|++|||
T Consensus 76 --~~~lv~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 76 --RLWIIMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred --EEEEEEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 689999999999999988643 488999999999999999999987 89999999999999999999999999
Q ss_pred CCccccccccc-----c---cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 639 LSIVSEDINSV-----G---GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 639 la~~~~~~~~~-----~---~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
++......... + +..++.. ....++.++|||||||++|||++|..|+..... ......+.. . .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~--~~~~~~~~~-~-----~ 218 (277)
T cd06917 147 VAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA--FRAMMLIPK-S-----K 218 (277)
T ss_pred ceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh--hhhhhcccc-C-----C
Confidence 98654322110 0 0011111 112346689999999999999999999864321 111111100 0 1
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+.+... .....+.+++.+||+.||++||++.|+++.
T Consensus 219 ~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 1111111 022347789999999999999999999864
No 287
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=5.4e-31 Score=278.58 Aligned_cols=251 Identities=18% Similarity=0.278 Sum_probs=180.0
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|... +++.||||.++... ....+.+.+|++++++++|+||+++++++.+.+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 73 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-------- 73 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC--------
Confidence 5788899999999999999865 68899999886432 333567899999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++++.+..+..+. ..+++.....++.+++.|++|||+. +++||||+|+||++++++.+||+|||++
T Consensus 74 ~~~iv~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~ 147 (288)
T cd07833 74 RLYLVFEYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFA 147 (288)
T ss_pred EEEEEEecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecc
Confidence 689999999998777665433 2378999999999999999999997 8999999999999999999999999998
Q ss_pred cccccccc--c-------ccCCCCCCccc-CCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhh----hc----
Q 004232 641 IVSEDINS--V-------GGKQEDPNSWE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSL----NS---- 701 (766)
Q Consensus 641 ~~~~~~~~--~-------~~~~~~~~~~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~----~~---- 701 (766)
........ . ...+++..... ..+.++|||||||++|||++|+.|+........ ...... ..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred cccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 65433221 0 01111111112 456689999999999999999988864322110 000000 00
Q ss_pred ----ccC--cccccccccc----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 702 ----QEG--RQRLVDPVVM----ATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 702 ----~~~--~~~~~d~~~~----~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... ..+..++... ..........+.+++.+||..+|++||++++|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 228 LFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred hcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 0000000000 0000011345789999999999999999999975
No 288
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=7.7e-31 Score=272.89 Aligned_cols=240 Identities=20% Similarity=0.321 Sum_probs=180.8
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE------- 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC-------
Confidence 4778899999999999999865 68999999986532 234678899999999999999999999887653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+++++|.+++.+. ..+++.....++.++++||+|||+. +++|+||||+||++++++.+||+|||+
T Consensus 74 -~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 74 -NMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred -eEEEEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 689999999999999998754 2478889999999999999999987 899999999999999999999999999
Q ss_pred Cccccccccccc-------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 640 SIVSEDINSVGG-------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 640 a~~~~~~~~~~~-------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
+........... ..++.......+.++||||||+++|||++|+.|+................. .... .+
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~- 222 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVL--YP- 222 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-cccc--Cc-
Confidence 865432211100 111111123356789999999999999999999875432222222211110 0011 11
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCH--HHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSF--EDIL 747 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~--~ev~ 747 (766)
.. ....+.+++.+||+.||.+||++ +|+.
T Consensus 223 --~~----~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 223 --AT----WSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --cc----CcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 01 11347789999999999999999 5543
No 289
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=7.9e-31 Score=272.39 Aligned_cols=241 Identities=20% Similarity=0.349 Sum_probs=179.7
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++||||+++++.+.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-------- 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-------- 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC--------
Confidence 4677889999999999999864 58899999986532 233467889999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DFGl 639 (766)
..++|+||+++++|.+++.+.. ...+++..+..++.+++.|++|||+. +++||||||+||++++++ .+|++|||.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 73 RLFIVMEYCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred eEEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 6899999999999999987543 23478999999999999999999987 899999999999999875 579999999
Q ss_pred Cccccccccccc--------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSVGG--------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~~~--------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+........... ..++.......+.++|||||||++|||++|..|+.... .......... .....+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~-~~~~~~--- 222 (257)
T cd08225 149 ARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--LHQLVLKICQ-GYFAPI--- 222 (257)
T ss_pred chhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHhc-ccCCCC---
Confidence 865433211110 01111111345568999999999999999999986322 1222221111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+ ..+.+++.+||+.+|++||++.||++
T Consensus 223 --~~~~~----~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 --SPNFS----RDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --CCCCC----HHHHHHHHHHhccChhhCcCHHHHhh
Confidence 11111 23678899999999999999999975
No 290
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-31 Score=257.96 Aligned_cols=247 Identities=18% Similarity=0.286 Sum_probs=185.9
Q ss_pred HHHhcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh--------hhhHHHHHHHHHHHHhC-CCCCccccccee
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKL-RHPHLVCLLGHC 548 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--------~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~ 548 (766)
+...+.|+..+++|+|..++|-++. ..+|...|+|++.... ....+...+|+.||+++ .||+|+++.+++
T Consensus 13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y 92 (411)
T KOG0599|consen 13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY 92 (411)
T ss_pred hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence 4445668888999999999999886 4578899999885321 12245567899999998 599999999999
Q ss_pred ecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC
Q 004232 549 IDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE 628 (766)
Q Consensus 549 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 628 (766)
..+. .+++|+|.|+.|.|.++|.+. -.++..+..+|+.++.+|++|||.. .||||||||+|||+|+
T Consensus 93 es~s--------F~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILldd 158 (411)
T KOG0599|consen 93 ESDA--------FVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDD 158 (411)
T ss_pred cCcc--------hhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeecc
Confidence 8763 789999999999999999754 2478888899999999999999998 7999999999999999
Q ss_pred CCcEEEecCCCCccccccccc---ccCC----CCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCcc-chHH
Q 004232 629 HRIAKLSDYGLSIVSEDINSV---GGKQ----EDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ-FLQE 694 (766)
Q Consensus 629 ~~~~kl~DFGla~~~~~~~~~---~~~~----~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~-~~~~ 694 (766)
+.++||+|||+|......... .+++ ++... -..++.+.|.||.|||||-++.|.+||....+ ....
T Consensus 159 n~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR 238 (411)
T KOG0599|consen 159 NMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLR 238 (411)
T ss_pred ccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHH
Confidence 999999999999765443221 1111 11110 12345578999999999999999999853221 1111
Q ss_pred HHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 695 ELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 695 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+ .+...++-.|.+... ...+.+|+.+|++.||++|-|.+|+++.
T Consensus 239 ~I-----meGkyqF~speWadi-----s~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 239 MI-----MEGKYQFRSPEWADI-----SATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HH-----HhcccccCCcchhhc-----cccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 11 123344444443221 2337799999999999999999999864
No 291
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=2e-30 Score=267.76 Aligned_cols=242 Identities=24% Similarity=0.414 Sum_probs=184.3
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+|+..+.||+|+||.||++... ++..+++|++........+.+.+|++++++++|||++++++++.... ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~~ 72 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD--------EL 72 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC--------eE
Confidence 4677889999999999999975 68899999997765556678999999999999999999999887753 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++++||+++++|.+++.... ..+++..+..++.+++.|++|||+. +++||||+|+||++++++.+||+|||.+..
T Consensus 73 ~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 73 WIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 99999999999999887642 3589999999999999999999996 899999999999999999999999999865
Q ss_pred ccccc---cccc----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 643 SEDIN---SVGG----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 643 ~~~~~---~~~~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
..... ...+ .+++.......+.++||||||+++|||++|+.|+...... ........ .......++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~~~~-- 222 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFKIAT-NGPPGLRNPEK-- 222 (253)
T ss_pred ccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHHh-cCCCCcCcccc--
Confidence 43321 1000 1111111233567899999999999999999998643221 11111111 11111111110
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+.+++.+||+.||++||++.||++
T Consensus 223 -----~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 -----WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0134778999999999999999999975
No 292
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=2.3e-30 Score=278.01 Aligned_cols=242 Identities=23% Similarity=0.329 Sum_probs=178.7
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|+..+.||+|+||.||+|+. .++..||+|++.... ....+.+.+|++++++++|||+++++++|.+..
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------- 98 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-------- 98 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC--------
Confidence 66678899999999999985 468999999986432 233467888999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++ |++.+.+.... ..++|..+..++.+++.|+.|||+. +|+||||+|+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 99 TAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred eEEEEEeCCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCc
Confidence 6799999997 47777665432 3489999999999999999999987 8999999999999999999999999998
Q ss_pred cccccccccccCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 641 IVSEDINSVGGKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 641 ~~~~~~~~~~~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
..........+.. ..|.. ....+.++|||||||++|||++|+.|+..... ......+.... ....
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~~~-~~~~----- 244 (317)
T cd06635 173 SIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNE-SPTL----- 244 (317)
T ss_pred cccCCcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHhcc-CCCC-----
Confidence 6543321111110 11111 12356689999999999999999998753221 11111111111 0000
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
. .......+.+++.+||+.+|.+||++.+|++..-
T Consensus 245 ~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 245 Q---SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred C---CccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 0 0111234778999999999999999999998643
No 293
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=1.9e-30 Score=274.24 Aligned_cols=239 Identities=21% Similarity=0.325 Sum_probs=179.1
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
|...+.||+|++|.||+|.. .++..||+|++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~--------~~~ 92 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD--------ELW 92 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC--------eEE
Confidence 33457899999999999985 468899999987655555667889999999999999999999887653 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||+++++|.+++... .+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++|||++...
T Consensus 93 ~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 93 VVMEFLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEEeccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 999999999999998752 378899999999999999999997 8999999999999999999999999987543
Q ss_pred cccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
...... + ...++......++.++|||||||++|||++|+.|+...... .....+.. .......++ .
T Consensus 166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~~---~ 239 (285)
T cd06648 166 SKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIRD-NLPPKLKNL---H 239 (285)
T ss_pred ccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHh-cCCCCCccc---c
Confidence 221100 0 11111111233567899999999999999999998643221 11111111 111111111 0
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.....+.+++.+||+.+|++||++.++++
T Consensus 240 ----~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 240 ----KVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ----cCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 01134788999999999999999999986
No 294
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=1.5e-30 Score=279.43 Aligned_cols=242 Identities=22% Similarity=0.276 Sum_probs=179.0
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+|+..+.||+|+||.||+|+.. +++.||+|.+..... ...+.+..|+++++.++||||+++++++.+..
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------- 74 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET------- 74 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-------
Confidence 6788899999999999999865 589999999875432 24567889999999999999999999987653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.... ...+++.....++.+++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 75 -~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 75 -YLCLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred -EEEEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecch
Confidence 6899999999999999887532 34588999999999999999999987 899999999999999999999999999
Q ss_pred Ccccccccccc-------------------------------------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCC
Q 004232 640 SIVSEDINSVG-------------------------------------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGP 682 (766)
Q Consensus 640 a~~~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~ 682 (766)
+.......... ...++.......+.++|||||||++|||++|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCC
Confidence 85432111000 00000011122455789999999999999999
Q ss_pred CccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCC----HHHHHH
Q 004232 683 SVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPS----FEDILW 748 (766)
Q Consensus 683 ~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs----~~ev~~ 748 (766)
.|+..... ...+..+.... ..+.. .......+.+++.+||+.||++||+ +.|++.
T Consensus 230 ~pf~~~~~--~~~~~~~~~~~--~~~~~-------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 230 TPFKGSNR--DETFSNILKKE--VTFPG-------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCCCCch--HHHHHHHhcCC--ccCCC-------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 99864322 11111111111 00000 0002234788999999999999999 555544
No 295
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=2.2e-30 Score=274.46 Aligned_cols=238 Identities=19% Similarity=0.288 Sum_probs=179.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|.+.+.||+|+||.||++... +++.||+|.++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS------ 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC------
Confidence 36788899999999999999864 68999999986532 233567889999999999999999999987753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +++||||+|+||+++.++.+||+|||
T Consensus 75 --~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 75 --NLYLVMEYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred --eEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 6899999999999999987653 478889999999999999999996 89999999999999999999999999
Q ss_pred CCccccccccc--c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 639 LSIVSEDINSV--G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 639 la~~~~~~~~~--~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
+++........ + ...++.......+.++||||||+++|||++|+.|+..... ......+.. . ...+
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-~-~~~~----- 217 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQIYEKILE-G-KVRF----- 217 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhc-C-CccC-----
Confidence 98654332111 0 1111111123345678999999999999999999864331 111111111 1 0111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRP-----SFEDIL 747 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~ 747 (766)
.... -..+.+++.+||+.+|.+|| +.+|++
T Consensus 218 ~~~~----~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 218 PSFF----SPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred CccC----CHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 0111 12367889999999999999 556654
No 296
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=7.7e-31 Score=323.18 Aligned_cols=252 Identities=34% Similarity=0.528 Sum_probs=154.2
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
++++|++|+|++|++++.+|. +.+++|++|+|++|.+++.+|..++++++|++|+|++|.+.+.+|..++++++|++|
T Consensus 116 ~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 193 (968)
T PLN00113 116 TSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFL 193 (968)
T ss_pred cCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCee
Confidence 444444444444444444442 234455555555555555555555566666666666666655566666666666666
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCc
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFS 271 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~ 271 (766)
+|++|++++.+|..++++++|+.|+|++|++++.+|. ++.+++|++|++++|.+++.+|.. ..+|+.|++++|+++
T Consensus 194 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~ 273 (968)
T PLN00113 194 TLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLS 273 (968)
T ss_pred eccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeee
Confidence 6666666666666666666666666666666555553 556666666666666666555542 234566666666666
Q ss_pred cCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCC
Q 004232 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (766)
Q Consensus 272 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~ 351 (766)
+.+|..+..+++|+.|++++|.+.+.+|..+.++++|+.|++++|.+++.+|..+..+++|+.|++++|.+++.+|..++
T Consensus 274 ~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 353 (968)
T PLN00113 274 GPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG 353 (968)
T ss_pred ccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHh
Confidence 66666666666666666666666666666666666666666666666666666666666677777777777666676666
Q ss_pred CCCCCceeecCCCcCCCC
Q 004232 352 NESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 352 ~~~~l~~l~l~~N~l~~~ 369 (766)
.+.+|+.+++++|.+++.
T Consensus 354 ~~~~L~~L~Ls~n~l~~~ 371 (968)
T PLN00113 354 KHNNLTVLDLSTNNLTGE 371 (968)
T ss_pred CCCCCcEEECCCCeeEee
Confidence 666777777777766653
No 297
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=2e-30 Score=279.28 Aligned_cols=244 Identities=20% Similarity=0.292 Sum_probs=188.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhh---hHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY---TVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~ 556 (766)
...|++.+.||+|.||.||+++.. +|+.+|+|.+++.... ....+.+|+++|+++. |||||.+++++.+..
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~---- 109 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD---- 109 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC----
Confidence 456888899999999999999965 5999999999765432 3468999999999998 999999999999864
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC----CcE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH----RIA 632 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----~~~ 632 (766)
.+++|||++.+|.|.+.+.+. .++......++.+++.+++|||+. +|+||||||+|+|+... +.+
T Consensus 110 ----~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~i 178 (382)
T KOG0032|consen 110 ----SVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRI 178 (382)
T ss_pred ----eEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcE
Confidence 789999999999999998765 278888999999999999999996 99999999999999743 479
Q ss_pred EEecCCCCcccccccccc---cCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 633 KLSDYGLSIVSEDINSVG---GKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~---~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|++|||+|.......... +++ ++......++.++||||.||++|.|+.|.+||......... ..+.. ..
T Consensus 179 k~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~--~~i~~--~~ 254 (382)
T KOG0032|consen 179 KLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF--LAILR--GD 254 (382)
T ss_pred EEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH--HHHHc--CC
Confidence 999999997765521111 111 11112245677899999999999999999999754432221 12211 11
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.++.++.+... ...+.+++.+++..||.+|++..++++.
T Consensus 255 ~~f~~~~w~~i-----s~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 255 FDFTSEPWDDI-----SESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCCCCCCcccc-----CHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 12333322211 2336788999999999999999999874
No 298
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1.2e-30 Score=276.21 Aligned_cols=247 Identities=20% Similarity=0.322 Sum_probs=174.6
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|+||.||+++. .+++.||+|.+.... ......+.+|+.++.++. ||||++++|++.+++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-------- 76 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-------- 76 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC--------
Confidence 455567899999999999985 468999999986532 344567889999999996 999999999887653
Q ss_pred eEEEEEEccCCCChhh---hhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 561 KVFLVYEFMSNGNFRT---HISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~---~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..+++|||++. ++.+ .+.... ...+++.....++.+++.||+|||+.. +++||||||+||++++++.+||+||
T Consensus 77 ~~~~~~e~~~~-~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 77 DCWICMELMDI-SLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred cEEEEEecccC-CHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeec
Confidence 57899999875 4433 332221 235888999999999999999999742 7999999999999999999999999
Q ss_pred CCCcccccccc----cc---cCCCCCCcc---cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 638 GLSIVSEDINS----VG---GKQEDPNSW---EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 638 Gla~~~~~~~~----~~---~~~~~~~~~---~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|++........ .+ ...++.... ..++.++|||||||++|||++|+.|+..... .......... ...
T Consensus 153 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~-~~~-- 228 (288)
T cd06616 153 GISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-VFDQLTQVVK-GDP-- 228 (288)
T ss_pred chhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-HHHHHhhhcC-CCC--
Confidence 99864322111 01 111111111 2456789999999999999999999864321 1111111111 000
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.+...........+.+++.+||+.+|++||+++||++.
T Consensus 229 ---~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 ---PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ---CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111122347899999999999999999999875
No 299
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=4.6e-30 Score=266.23 Aligned_cols=243 Identities=20% Similarity=0.344 Sum_probs=184.3
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|...+.||+|++|.||+|... ++..|++|++.... ....+.+.+|++++++++||||+++++.+.+.. ..
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE------KN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC------CC
Confidence 3667789999999999999965 78999999986554 245678899999999999999999999988652 12
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|+||+++++|.+++.+.. .+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 6899999999999999987653 589999999999999999999996 8999999999999999999999999998
Q ss_pred cccccccc---cc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 641 IVSEDINS---VG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 641 ~~~~~~~~---~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
........ .. ...++.......+.++||||||+++|||++|..|+..... ................+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd06606 149 KRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-PMAALYKIGSSGEPPEIPE 227 (260)
T ss_pred EecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHhccccCCCcCCCc
Confidence 65443221 00 0111111112356689999999999999999999865431 1111111111111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.....+.+++.+|++.+|++||++.|+++
T Consensus 228 ---------~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 228 ---------HLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ---------ccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11234778899999999999999999975
No 300
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=2.7e-30 Score=273.01 Aligned_cols=252 Identities=16% Similarity=0.270 Sum_probs=180.7
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-------- 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-------- 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC--------
Confidence 4777889999999999999864 68999999987543 333567899999999999999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+ +++|.+++.... ..+++..+..++.+++.||+|||+. +++|+||||+||+++.++.+|++|||++
T Consensus 73 ~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 73 GFVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred eeEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 689999999 999999886543 4588999999999999999999997 8999999999999999999999999998
Q ss_pred cccccccc------ccc---CCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhh-hhcc------
Q 004232 641 IVSEDINS------VGG---KQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDS-LNSQ------ 702 (766)
Q Consensus 641 ~~~~~~~~------~~~---~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~-~~~~------ 702 (766)
........ .+. ..++.. .....+.++||||+||++|||+||.+++....... ...... ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07832 147 RLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP 226 (286)
T ss_pred ccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHh
Confidence 65432210 000 111111 11224568999999999999999977765322110 011100 0000
Q ss_pred -----cCccccccccccC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 -----EGRQRLVDPVVMA----TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 -----~~~~~~~d~~~~~----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+..+.... ....+....+.+++.+|++.+|.+||+++++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 227 GLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000000 0000112457899999999999999999999753
No 301
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=279.11 Aligned_cols=240 Identities=24% Similarity=0.343 Sum_probs=180.6
Q ss_pred CCcCCceecCCceeEEEEE-ecCCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|...+.||.|+||.||-|+ ..+.+.||||++.-..+ ...+++..|+..|.+++|||+|.+.|+|....
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-------- 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-------- 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc--------
Confidence 4556789999999999998 45789999999975433 33678899999999999999999999998653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..|||||||-| +-.+.+.-+. +++..-++..|..|+..||+|||+. +.||||||+.||||.+.|.+|++|||-|
T Consensus 100 TaWLVMEYClG-SAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 100 TAWLVMEYCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred hHHHHHHHHhc-cHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccch
Confidence 67999999976 6666654332 4588888999999999999999998 7899999999999999999999999998
Q ss_pred cccccccccccCCC--CC-----CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 641 IVSEDINSVGGKQE--DP-----NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 641 ~~~~~~~~~~~~~~--~~-----~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
.......+..+++. .| ..-+.++-++||||+|+++.|+...++|... ......+-.+...+ .|.+
T Consensus 174 si~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFn--MNAMSALYHIAQNe------sPtL 245 (948)
T KOG0577|consen 174 SIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN--MNAMSALYHIAQNE------SPTL 245 (948)
T ss_pred hhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccC--chHHHHHHHHHhcC------CCCC
Confidence 77666555444321 00 0113455689999999999999999998652 22222222222211 1111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... +-...+..++..|++.-|.+|||..++++.
T Consensus 246 -qs~--eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 246 -QSN--EWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred -CCc--hhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 111 112336788899999999999999988764
No 302
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=1.9e-30 Score=281.20 Aligned_cols=259 Identities=19% Similarity=0.303 Sum_probs=181.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|... +++.||||++... .......+.+|+.+++++ +||||++++|+|....+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~---- 81 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND---- 81 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC----
Confidence 467888899999999999999865 6889999988542 223345677899999999 99999999998875431
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||++ ++|..++.+. .++|..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 82 --~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 82 --KDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred --ceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeec
Confidence 35799999998 5998888653 478999999999999999999987 8999999999999999999999999
Q ss_pred CCCccccccccc----------ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhhhc-
Q 004232 638 GLSIVSEDINSV----------GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSLNS- 701 (766)
Q Consensus 638 Gla~~~~~~~~~----------~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~~~- 701 (766)
|++......... +... ..|. .....+.++|||||||++|||+||+.|+........ ........
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07852 152 GLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGP 231 (337)
T ss_pred cchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 998654322110 0000 0111 112345679999999999999999998863221110 00000000
Q ss_pred ----------ccCcccccc----ccccC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHH
Q 004232 702 ----------QEGRQRLVD----PVVMA--TSSLESLSIVISIANKCICSESWSRPSFEDILWN--LQYAA 754 (766)
Q Consensus 702 ----------~~~~~~~~d----~~~~~--~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~~~ 754 (766)
......+.+ ..... .........+.+++.+||+.+|++|||+.++++. ++...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~ 302 (337)
T cd07852 232 PSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFH 302 (337)
T ss_pred CCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhc
Confidence 000000000 00000 0000012347889999999999999999999976 44443
No 303
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=1.6e-30 Score=276.00 Aligned_cols=254 Identities=19% Similarity=0.245 Sum_probs=178.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhh--hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY--TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~--~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|+..+.||+|+||.||+|... +++.||+|.++..... ....+.+|+.++++++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~------ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNL------ 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC------
Confidence 46888899999999999999975 6889999998754322 23456789999999999999999999876521
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||+++ +|.+++.... ..+++.....++.|++.||+|||+. +++||||||+||++++++.+||+|||+
T Consensus 79 ~~~~lv~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 79 DKIYMVMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred CcEEEEehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 368999999985 8988886543 2589999999999999999999987 899999999999999999999999999
Q ss_pred Ccccccccc-c----c---cCCCCCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhh---------
Q 004232 640 SIVSEDINS-V----G---GKQEDPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLN--------- 700 (766)
Q Consensus 640 a~~~~~~~~-~----~---~~~~~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~--------- 700 (766)
+........ . + ...++... ....+.++|+|||||++|||++|..|+....... ...+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 153 AREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred eeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 865433211 0 0 01111111 1123567999999999999999999886432210 00000000
Q ss_pred ---ccc-----CccccccccccCCCCHH-HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 701 ---SQE-----GRQRLVDPVVMATSSLE-SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 701 ---~~~-----~~~~~~d~~~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... .........+....... ....+.+++.+|++.+|++|||+.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 00000000000000000 1234678999999999999999999975
No 304
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=1.5e-30 Score=281.70 Aligned_cols=256 Identities=15% Similarity=0.262 Sum_probs=181.0
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+. .+|..||+|++.... ....+.+.+|+.++++++||||+++++++..... ..
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~ 80 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA----DF 80 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCC----CC
Confidence 6788889999999999999985 469999999986532 2345677889999999999999999998765431 12
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||+. |+|.+++.... .+++.....++.+++.||+|||+. +|+||||||+||++++++.+||+|||+
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~ 153 (334)
T cd07855 81 KDVYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGM 153 (334)
T ss_pred ceEEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEeccccc
Confidence 36899999996 68988886442 388999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc---------ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhhhcc---
Q 004232 640 SIVSEDINSV---------GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSLNSQ--- 702 (766)
Q Consensus 640 a~~~~~~~~~---------~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~~~~--- 702 (766)
+......... +... ..|. .....+.++|||||||++|||++|+.||........ ..+......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~ 233 (334)
T cd07855 154 ARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE 233 (334)
T ss_pred ceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence 8654321110 0000 0111 112356689999999999999999999864322110 000000000
Q ss_pred --------cCcccccccc-ccCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 --------EGRQRLVDPV-VMATSS-----LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 --------~~~~~~~d~~-~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+..+.. ...... ......+.+++.+|++.+|++||++++++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 234 EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0000000000 000000 0112457899999999999999999999875
No 305
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=282.82 Aligned_cols=241 Identities=21% Similarity=0.368 Sum_probs=180.8
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+++...||.|+||+||||+-+ ++...|.|.+........+++.-||+||+..+||+||+|++.|... +.+|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~e--------nkLw 105 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFE--------NKLW 105 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhcc--------CceE
Confidence 344567899999999999854 5666788888877777788999999999999999999999977655 3799
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+..|||.||..+..+-+- +.+|+..++..++++++.||.|||+. .|||||||+.|||+.-+|.+|++|||++...
T Consensus 106 iliEFC~GGAVDaimlEL--~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLEL--GRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKN 180 (1187)
T ss_pred EEEeecCCchHhHHHHHh--ccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccc
Confidence 999999999999887654 35689999999999999999999998 7999999999999999999999999998432
Q ss_pred ccccccccCCCCCCcc-------------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 644 EDINSVGGKQEDPNSW-------------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 644 ~~~~~~~~~~~~~~~~-------------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
..........-...|| .+|.+++||||||++|.||..+.+|..... ....+-.+...+ .
T Consensus 181 ~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHheln--pMRVllKiaKSe------P 252 (1187)
T KOG0579|consen 181 KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSE------P 252 (1187)
T ss_pred hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccc--hHHHHHHHhhcC------C
Confidence 2111100111111223 345678999999999999999998865322 122222222211 1
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
|.+..+..+ ...+-++..+|+..+|..||+..|+++
T Consensus 253 PTLlqPS~W--s~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 253 PTLLQPSHW--SRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred CcccCcchh--hhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 222222211 123668889999999999999999875
No 306
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=3e-30 Score=272.03 Aligned_cols=251 Identities=17% Similarity=0.260 Sum_probs=175.2
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|++.+.||+|+||.||+|+. .++..||+|+++... ........+|+.+++++. |||++++++++.+... ..
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~------~~ 74 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKT------GR 74 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCC------Cc
Confidence 45678899999999999985 468999999986532 222234457888899885 9999999999987521 26
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||++ |++.+.+.... ..++|..+..++.+++.||+|||+. +++||||||+||+++. +.+||+|||++.
T Consensus 75 ~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 75 LALVFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEEEEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 899999997 58888776532 3589999999999999999999997 8999999999999999 999999999986
Q ss_pred cccccccc----c---cCCCC-CCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcc----------
Q 004232 642 VSEDINSV----G---GKQED-PNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQ---------- 702 (766)
Q Consensus 642 ~~~~~~~~----~---~~~~~-~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~---------- 702 (766)
........ + ...++ .......+.++|||||||++|||++|..|+...... ...........
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 54322111 0 01111 111133466899999999999999999998643321 11111111000
Q ss_pred -cCccccccccccCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 703 -EGRQRLVDPVVMATS----SLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 703 -~~~~~~~d~~~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
........+...... .......+.+++.+||+.+|++||+++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000011000000 0012345789999999999999999999975
No 307
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=2.3e-30 Score=280.39 Aligned_cols=257 Identities=16% Similarity=0.264 Sum_probs=180.0
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .......+.+|+.++++++||||+++++++....- ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~ 80 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSF---ESF 80 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccc---ccc
Confidence 46789999999999999999985 57899999998643 23345667889999999999999999998765431 111
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++|+||+++ ++..++... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 81 NDVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred ceEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 357999999985 787777532 488999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccccc--------cC-CCCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc---
Q 004232 640 SIVSEDINSVG--------GK-QEDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE--- 703 (766)
Q Consensus 640 a~~~~~~~~~~--------~~-~~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~--- 703 (766)
+.......... .. ...|. .....+.++|||||||++|||++|+.|+....... ...+.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 153 ARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred eeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 86543211100 00 00111 11234567899999999999999999986432111 00011100000
Q ss_pred Ccccccccc---------ccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 GRQRLVDPV---------VMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 ~~~~~~d~~---------~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+.+.. ....... .....+.+++.+||+.+|.+||++.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 0000000 012347899999999999999999999876
No 308
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.6e-30 Score=276.12 Aligned_cols=257 Identities=19% Similarity=0.240 Sum_probs=177.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|+..+.||+|+||.||+|+.. +++.||||.++.... .....+.+|+.++++++ ||||+++++++...... .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~---~ 77 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKN---G 77 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCC---C
Confidence 36888899999999999999864 689999998764322 23457888999999995 69999999988765311 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTP--GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~ 635 (766)
....++||||+++ +|.+++..... ...+++.....++.||+.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 78 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~ 153 (295)
T cd07837 78 KPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIA 153 (295)
T ss_pred CceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEe
Confidence 1247999999996 88888764322 24578999999999999999999987 8999999999999998 8899999
Q ss_pred cCCCCcccccccc-c----c---cCCCC-CCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---cc
Q 004232 636 DYGLSIVSEDINS-V----G---GKQED-PNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS---QE 703 (766)
Q Consensus 636 DFGla~~~~~~~~-~----~---~~~~~-~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~---~~ 703 (766)
|||++........ . . ...++ .......+.++|||||||++|||+||..|+...... .....+.. ..
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~ 231 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL--QQLLHIFKLLGTP 231 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHhCCC
Confidence 9999864321110 0 0 00111 001123466899999999999999999988643221 11111100 00
Q ss_pred Ccc------cccc----ccccC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 GRQ------RLVD----PVVMA----TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~~~------~~~d----~~~~~----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... ...+ +.... .........+.+++.+|++.||.+||+++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 0000 00000 000011234778999999999999999999875
No 309
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=2.4e-30 Score=269.70 Aligned_cols=236 Identities=19% Similarity=0.271 Sum_probs=175.4
Q ss_pred eecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||.||+++.. +|+.+|+|.+..... ...+.+.+|++++++++||||+++++.+.+. ...++||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~--------~~~~lv~ 72 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGK--------KNLYLVM 72 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecC--------cEEEEEE
Confidence 689999999999976 499999999875433 4466788999999999999999999988764 3689999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+|||++......
T Consensus 73 e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 73 EYLPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999999987643 488999999999999999999987 8999999999999999999999999998543221
Q ss_pred cc---------cc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 647 NS---------VG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 647 ~~---------~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
.. .. ...++.......+.++||||||+++||++||+.|+..... ......+.. . ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~-~---~~~~ 220 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--EEIFQNILN-G---KIEW 220 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhc-C---CcCC
Confidence 10 00 0001111112245579999999999999999999864332 111111111 0 0000
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
+.... ....+.+++.+||+.+|++||++.+|.+.|+
T Consensus 221 ~~~~~-----~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 221 PEDVE-----VSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred Ccccc-----CCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 10000 1234678999999999999999976666554
No 310
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=1.5e-30 Score=274.65 Aligned_cols=253 Identities=19% Similarity=0.233 Sum_probs=179.5
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
+|+..+.||+|+||.||+|+.. +|..||||+++.... ...+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~ 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN--------K 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC--------c
Confidence 4778899999999999999964 689999999875432 23456778999999999999999999998764 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++ +|.+++........+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|||++.
T Consensus 73 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 73 LMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 7999999995 8888886554344589999999999999999999987 89999999999999999999999999986
Q ss_pred cccccccc-----c---cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc--------
Q 004232 642 VSEDINSV-----G---GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE-------- 703 (766)
Q Consensus 642 ~~~~~~~~-----~---~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~-------- 703 (766)
........ . ...++.. .....+.++|||||||++|||++|+.|+....... ...........
T Consensus 149 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07836 149 AFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGI 228 (284)
T ss_pred hhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHH
Confidence 43221110 0 1111110 11223567899999999999999999886432110 01000000000
Q ss_pred -CccccccccccCC------CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 -GRQRLVDPVVMAT------SSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 -~~~~~~d~~~~~~------~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+........ ........+.+++.+|++.||.+||++.||++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 229 SQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000000 00011234678999999999999999999974
No 311
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=264.17 Aligned_cols=258 Identities=23% Similarity=0.382 Sum_probs=194.6
Q ss_pred HHHHHHHhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccce
Q 004232 475 LEELKEATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGH 547 (766)
Q Consensus 475 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~ 547 (766)
.+++......+.....+-+|.||.||+|.|. +.+.|-||.++.. .......+..|-..+..+.|||+.++.|+
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3455555566888889999999999999654 3455777777654 34446678889889999999999999999
Q ss_pred eecCCCCCCcCcceEEEEEEccCCCChhhhhh-----cCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCC
Q 004232 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHIS-----ENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTN 622 (766)
Q Consensus 548 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~ 622 (766)
|.+.. ...+.+|.++.-|+|..+|. +......++-.+...++.|++.|++|||.+ +|||.||.++
T Consensus 356 ~ie~~-------~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaR 425 (563)
T KOG1024|consen 356 SIEDY-------ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAAR 425 (563)
T ss_pred Eeecc-------CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhh
Confidence 99864 35689999999999999997 222234467778888999999999999998 8999999999
Q ss_pred ceEEcCCCcEEEecCCCCccc--ccccccccCCCCCCcccC--------CCCCCCEeehhHHHHHHhc-CCCccccCccc
Q 004232 623 NILLNEHRIAKLSDYGLSIVS--EDINSVGGKQEDPNSWEM--------TKLEDDVFSFGFMLLESVA-GPSVAARKGQF 691 (766)
Q Consensus 623 NILld~~~~~kl~DFGla~~~--~~~~~~~~~~~~~~~~~~--------~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~ 691 (766)
|++||+..++|++|-.+++-. .++...+.....|..|+. ++..+|||||||+||||+| |+.|+.+-+.+
T Consensus 426 NCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 426 NCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred cceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 999999999999999999653 333333433334555533 4567899999999999998 78888654333
Q ss_pred hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 692 LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
... ....++ .++-.|. .+..++..++..||+..|++||+|+|++..|.+..
T Consensus 506 Em~---~ylkdG--yRlaQP~-------NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 506 EME---HYLKDG--YRLAQPF-------NCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred HHH---HHHhcc--ceecCCC-------CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 222 222222 2222221 22334788999999999999999999999998753
No 312
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=3.2e-30 Score=272.07 Aligned_cols=250 Identities=18% Similarity=0.238 Sum_probs=177.3
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|+..+.||+|++|.||+|.. .+|..||+|++.... ....+.+.+|++++++++|||++++++++.+.+ .
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~--------~ 72 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN--------K 72 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC--------e
Confidence 56678999999999999985 479999999986543 223456788999999999999999999988653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||++ ++|.+++..... ..+++..+..++.++++||+|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 73 ~~iv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 73 LYLVFEFLD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEEEEeccC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 899999995 689998875432 3589999999999999999999987 89999999999999999999999999986
Q ss_pred cccccccc--------ccCCCCCCcc-cCCCCCCCEeehhHHHHHHhcCCCccccCccchH--HHHhhhhccc-------
Q 004232 642 VSEDINSV--------GGKQEDPNSW-EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ--EELDSLNSQE------- 703 (766)
Q Consensus 642 ~~~~~~~~--------~~~~~~~~~~-~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~--~~~~~~~~~~------- 703 (766)
........ ....++.... ...+.++|||||||++|||+||+.||........ ..........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd07835 148 AFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV 227 (283)
T ss_pred ccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh
Confidence 43221110 0111111111 2245679999999999999999999864332111 0000000000
Q ss_pred -----C---ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 -----G---RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 -----~---~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ......+.... ........+.+++.+|++.+|.+||+++||++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 228 TSLPDYKPTFPKWARQDLSK-VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhchhhhhhcccccccchhh-hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 00000000000 00001134778999999999999999999975
No 313
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=284.01 Aligned_cols=199 Identities=26% Similarity=0.373 Sum_probs=157.9
Q ss_pred CCcCCceecCCceeEEEEE-ecCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 485 FDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+...+.||+|+||.||+|+ ..+|+.||||.++.. ....++...+|+++|++++|||||+++|.=.+.. ........
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~--~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKF--LGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccc--cCcccccc
Confidence 3456789999999999999 678999999998763 3445677889999999999999999988643322 00112356
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc--CCC--cEEEecCC
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN--EHR--IAKLSDYG 638 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~--~~kl~DFG 638 (766)
.+|||||++|||+..+.+-+....|+..+.+.+..+++.||.|||++ +|+||||||.||++- ++| .-||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 89999999999999998766556799999999999999999999987 899999999999984 334 48999999
Q ss_pred CCccccccccccc---CCC----CCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 639 LSIVSEDINSVGG---KQE----DPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 639 la~~~~~~~~~~~---~~~----~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
.|+..++...... +.. +... -..++..+|.|||||++||.+||..||...
T Consensus 170 ~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 170 AARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred ccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 9998876543322 211 1111 245666789999999999999999998643
No 314
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=271.83 Aligned_cols=241 Identities=17% Similarity=0.253 Sum_probs=183.0
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+-|++.+.||+|.|++|-.|+ .-+|+.||||++.+.+. .....+.+|+..|+-++|||||+||.+.-..
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-------- 89 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-------- 89 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc--------
Confidence 447778899999999999998 46899999999987653 3356788899999999999999999876543
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYG 638 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFG 638 (766)
..+|||+|.-.+|+|++||.++..+ +...-..+++.||..|+.|+|+- .+|||||||+||..-+ -|-+|++|||
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecc
Confidence 3799999999999999999887643 77888889999999999999997 7899999999999875 4789999999
Q ss_pred CCcccccccc-------cccCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINS-------VGGKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~-------~~~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
++-....... .++..++.. .-.+-.++.||||+|||||-++.|+.||....+... +..++|
T Consensus 165 FSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-----------LTmImD 233 (864)
T KOG4717|consen 165 FSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-----------LTMIMD 233 (864)
T ss_pred ccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-----------hhhhhc
Confidence 9844332211 111111111 112334578999999999999999999976543211 122233
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
-..-. +..-..++.+|+..+++.||++|-+.+||+..
T Consensus 234 CKYtv--PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 234 CKYTV--PSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ccccC--chhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 22111 11223457899999999999999999999753
No 315
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=5.9e-30 Score=265.09 Aligned_cols=239 Identities=21% Similarity=0.382 Sum_probs=181.9
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD-------- 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC--------
Confidence 4677889999999999999854 688999999976543 45678999999999999999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++++|.+++... ..+++..+..++.+++.|+.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 73 SLYIILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEEEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 689999999999999998754 3489999999999999999999987 8999999999999999999999999998
Q ss_pred ccccccccc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
......... + ...++......++.++||||+|+++|||++|..|+...... ........ .....+
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~--~~~~~~~~-~~~~~~---- 219 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM--AALFRIVQ-DDHPPL---- 219 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHhc-cCCCCC----
Confidence 654332211 0 01111111123456899999999999999999998643221 11111111 111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.... ...+.+++.+|+..+|++||++.+++.
T Consensus 220 -~~~~----~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 220 -PEGI----SPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCCC----CHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1111 123678899999999999999999874
No 316
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=4e-30 Score=277.56 Aligned_cols=248 Identities=19% Similarity=0.260 Sum_probs=174.9
Q ss_pred CceecC--CceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEG--SYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G--~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
..||+| +||+||+++. .+|+.||||.+.... ....+.+++|+.+++.++||||++++++|...+ ..+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~--------~~~ 75 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS--------WLW 75 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC--------ceE
Confidence 356666 9999999985 479999999986432 334577899999999999999999999998753 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||+++|++.+++.+... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+...
T Consensus 76 ~v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 76 VISPFMAYGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred EEEecccCCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 99999999999998876432 3478888889999999999999987 8999999999999999999999999864221
Q ss_pred ccccc---c---------ccC-CCCCCcc----cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC--
Q 004232 644 EDINS---V---------GGK-QEDPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG-- 704 (766)
Q Consensus 644 ~~~~~---~---------~~~-~~~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~-- 704 (766)
..... . ... ...|... ..++.++|||||||++|||++|+.|+...... ......+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~ 230 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-QMLLQKLKGPPYSP 230 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-HHHHHHhcCCCCCC
Confidence 11000 0 000 0111111 12456789999999999999999998642211 110110000000
Q ss_pred ---------------------------------ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 ---------------------------------RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ---------------------------------~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+.+..............+.+++.+||+.||.+|||++|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 231 LDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000001111111112234568899999999999999999999865
No 317
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=4.4e-30 Score=271.01 Aligned_cols=251 Identities=18% Similarity=0.302 Sum_probs=177.5
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|++.+.||+|+||+||+|+.. +++.||||++..... .......+|+..+++++ ||||+++++++.+.+ .
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--------~ 72 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND--------E 72 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC--------c
Confidence 556789999999999999975 578999999865422 22334557899999999 999999999988753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+ +|+|.+++.... ...++|..+..++.+++.||.|||+. +++|+||||+||++++++.+||+|||++.
T Consensus 73 ~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 73 LYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 89999999 889999887653 23579999999999999999999997 89999999999999999999999999986
Q ss_pred cccccccc----cc---CCCC-CCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcc----------
Q 004232 642 VSEDINSV----GG---KQED-PNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQ---------- 702 (766)
Q Consensus 642 ~~~~~~~~----~~---~~~~-~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~---------- 702 (766)
........ +. ..++ .......+.++||||||+++|||++|+.|+....... ..........
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd07830 148 EIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGY 227 (283)
T ss_pred eccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHh
Confidence 54332111 11 1111 1112234678999999999999999998885432211 0000000000
Q ss_pred --cCccccccccccCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 703 --EGRQRLVDPVVMATS----SLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 703 --~~~~~~~d~~~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.......-+...... .......+.+++.+||+.+|++||+++||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 228 KLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000000000000 0011245789999999999999999999975
No 318
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=7.5e-30 Score=266.08 Aligned_cols=230 Identities=16% Similarity=0.251 Sum_probs=172.1
Q ss_pred eecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.++. ..++|+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~ 72 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK--------YIYMLM 72 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC--------ccEEEE
Confidence 699999999999965 58999999986532 234567899999999999999999999887653 689999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +++|+||||+||+++.++.+|++|||++......
T Consensus 73 e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 73 EYCLGGELWTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred ecCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 9999999999997643 378888999999999999999996 8999999999999999999999999998655332
Q ss_pred ccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCH
Q 004232 647 NSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSL 719 (766)
Q Consensus 647 ~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 719 (766)
... ...+++.......+.++|+||||+++|||++|..|+.............+........ -|.
T Consensus 147 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~------- 217 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE--FPN------- 217 (262)
T ss_pred cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC--CCc-------
Confidence 110 0111111112334667899999999999999999986443212222222211010001 010
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCH
Q 004232 720 ESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 720 ~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
.....+.+++.+||+.+|++||++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~ 241 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGN 241 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCC
Confidence 012347889999999999999993
No 319
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=4.6e-30 Score=280.02 Aligned_cols=256 Identities=18% Similarity=0.242 Sum_probs=180.5
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..+.|+..+.||+|+||.||+|+. .+|+.||||.+... .......+.+|+.++++++||||+++++++.......
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE-- 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc--
Confidence 346788899999999999999985 47899999998643 2334466778999999999999999999886543111
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++||||+.+ +|.+.+... +++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 92 ~~~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 92 EFQDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred ccCcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccC
Confidence 11357999999975 788777532 77888889999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---------
Q 004232 638 GLSIVSEDINSVG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS--------- 701 (766)
Q Consensus 638 Gla~~~~~~~~~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~--------- 701 (766)
|++.......... ...++.......+.++|||||||++|||++|+.||...... ..+..+..
T Consensus 163 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 163 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI--DQWNKIIEQLGTPSDEF 240 (353)
T ss_pred ccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHhcCCCCHHH
Confidence 9996543321110 01111111234566899999999999999999998643211 11111100
Q ss_pred -------------ccC------cccccccccc----CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 -------------QEG------RQRLVDPVVM----ATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 -------------~~~------~~~~~d~~~~----~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ..+....... ..........+.+++.+|++.||++||++.|++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 0000000000 00011123457799999999999999999999865
No 320
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=9.5e-30 Score=265.73 Aligned_cols=242 Identities=21% Similarity=0.303 Sum_probs=178.3
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC-----hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS-----KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.+|++.+.||+|+||.||+|+. .++..||+|.+... .....+.+++|++++++++||||+++++++.+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~--- 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE--- 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC---
Confidence 4688899999999999999985 46899999987432 12345678899999999999999999998876431
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
...++|+||+++++|.+++.... .+++.....++.+++.|+.|||+. +++||||||+||+++.++.+||+|
T Consensus 79 ---~~~~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 ---KKLSIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred ---CEEEEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 35789999999999999987543 378888899999999999999987 899999999999999999999999
Q ss_pred CCCCcccccccc-------c-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINS-------V-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~-------~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||++........ . + +..++.......+.++|||||||++|||++|+.|+..... ...+.........
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~ 227 (264)
T cd06653 150 FGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIFKIATQPTK 227 (264)
T ss_pred cccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--HHHHHHHHcCCCC
Confidence 999864321100 0 0 0111111112345678999999999999999999864221 1112222111111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+.+... ....+.+++.+||. +|.+||+..+++.
T Consensus 228 -----~~~p~~----~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 -----PMLPDG----VSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -----CCCCcc----cCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 111111 11336788999999 5799999998764
No 321
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=4.4e-30 Score=274.68 Aligned_cols=261 Identities=16% Similarity=0.226 Sum_probs=178.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||++++++|...+......
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 356888999999999999999864 68999999886432 222345678999999999999999999988754211111
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++||||+++ ++.+.+.... ..+++.+...++.|++.||+|||++ +++||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 2357999999975 7887776432 2478999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc---------c---cCCCCCCcc-cCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcc--
Q 004232 639 LSIVSEDINSV---------G---GKQEDPNSW-EMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQ-- 702 (766)
Q Consensus 639 la~~~~~~~~~---------~---~~~~~~~~~-~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~-- 702 (766)
++......... + ..+++.... ...+.++|||||||++|||+||..|+...... ....+..+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 98654221110 0 011110011 12456799999999999999999888643221 11111111100
Q ss_pred -cCcc-----ccccccccCCC----------CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 703 -EGRQ-----RLVDPVVMATS----------SLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 703 -~~~~-----~~~d~~~~~~~----------~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+... ...+....... .......+.+++.+||..||.+||+++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 00000000000 0001134678999999999999999999975
No 322
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=6.4e-32 Score=263.89 Aligned_cols=239 Identities=22% Similarity=0.316 Sum_probs=181.5
Q ss_pred CCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 485 FDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
|++.+.||+|+||.||||. .+.|..||||++... .+.+++..|+.+|.+.+.|++|++||.+.... .+|
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s--------DLW 104 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS--------DLW 104 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCC--------ceE
Confidence 5667899999999999997 457999999998764 35688999999999999999999999776542 589
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|||||..|+..+.++-+ .+++...+...+.....+||+|||.. .=+|||||+.|||++.+|.+|++|||+|...
T Consensus 105 IVMEYCGAGSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 105 IVMEYCGAGSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred eehhhcCCCcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchh
Confidence 999999999999998755 36799999999999999999999986 4589999999999999999999999999665
Q ss_pred ccccccccCCCCCCccc--------CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 644 EDINSVGGKQEDPNSWE--------MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 644 ~~~~~~~~~~~~~~~~~--------~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
.++.....+.-....|+ .+..++|+||+|+...||..|++|+..-.. .+.+.- +..-..|..
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP-----MRAIFM---IPT~PPPTF-- 249 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP-----MRAIFM---IPTKPPPTF-- 249 (502)
T ss_pred hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc-----cceeEe---ccCCCCCCC--
Confidence 44322111111122343 355689999999999999999999863111 011100 000011111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+++-....-+++..|+...|++|-|+.++++
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 112233445788999999999999998877654
No 323
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=4.3e-30 Score=273.85 Aligned_cols=263 Identities=20% Similarity=0.281 Sum_probs=181.6
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
...++|++.+.||+|+||.||+|... +|+.||||.++... ......+.+|++++++++||||+++++++.+......
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34678999999999999999999965 68999999986432 2234567889999999999999999999876430000
Q ss_pred c--CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 557 Y--AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 557 ~--~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
. .....++|+||+++ ++...+... ...+++.....++.+++.||+|||+. +|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEe
Confidence 0 01268999999987 676666543 23488999999999999999999997 8999999999999999999999
Q ss_pred ecCCCCcccccccccc--c---C--CCCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc
Q 004232 635 SDYGLSIVSEDINSVG--G---K--QEDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE 703 (766)
Q Consensus 635 ~DFGla~~~~~~~~~~--~---~--~~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~ 703 (766)
+|||++.......... . . ...|. .....+.++|||||||++|||++|+.|+....... ...+.......
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999986543221100 0 0 01111 11234567999999999999999999986433211 11111111100
Q ss_pred C---ccccc--------cccccC-----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 G---RQRLV--------DPVVMA-----TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~---~~~~~--------d~~~~~-----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ...+. ++.... .........+.+++.+||+.+|++||++.+|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00000 000000 000001234789999999999999999999875
No 324
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=7.7e-30 Score=268.75 Aligned_cols=236 Identities=20% Similarity=0.285 Sum_probs=167.8
Q ss_pred ceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHH---HHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 490 IMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLD---LLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~---~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+||+|+||.||++.. .+++.+|+|.+..... .....+.+|.. ++...+||||+.+++++.+.+ ..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~~ 72 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD--------KL 72 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC--------eE
Confidence 489999999999986 4689999998865321 11223334443 334457999999998887653 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+|++|||++..
T Consensus 73 ~lv~e~~~~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 73 CFILDLMNGGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999999887543 489999999999999999999997 899999999999999999999999999854
Q ss_pred ccccccc---ccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 643 SEDINSV---GGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 643 ~~~~~~~---~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
....... +... ..|.. ....+.++|||||||++|||+||..||................. .++.+..
T Consensus 147 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~~~~~~ 220 (279)
T cd05633 147 FSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT------VNVELPD 220 (279)
T ss_pred ccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc------CCcCCcc
Confidence 3321111 1100 01111 12356689999999999999999999864322222222211110 0111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
.. ...+.+++.+|++.||++|| +++|+++.
T Consensus 221 ~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 221 SF----SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cc----CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 11 23467888999999999999 58888764
No 325
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1e-29 Score=271.79 Aligned_cols=241 Identities=24% Similarity=0.327 Sum_probs=176.2
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|+..+.||+|+||.||+|+. .++..||+|.+... .....+++.+|++++++++|||++++++++.+..
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------- 88 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-------- 88 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC--------
Confidence 55667899999999999985 46889999988642 2234567888999999999999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+. |++.+.+.... ..+++..+..++.+++.|+.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 162 (308)
T cd06634 89 TAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSA 162 (308)
T ss_pred eeEEEEEccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccc
Confidence 6899999997 68877765432 3478889999999999999999987 8999999999999999999999999998
Q ss_pred cccccccccccCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 641 IVSEDINSVGGKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 641 ~~~~~~~~~~~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
..........+.. ..|.. ....+.++|||||||++|||++|+.|+...... .....+.... .....
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~-~~~~~---- 235 (308)
T cd06634 163 SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNE-SPALQ---- 235 (308)
T ss_pred eeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--HHHHHHhhcC-CCCcC----
Confidence 6543221111110 01111 123456899999999999999999987532211 1111111110 11100
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
. ......+.+++.+||+.+|.+||++.+|++.-
T Consensus 236 -~---~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 236 -S---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred -c---ccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0 01123367889999999999999999998764
No 326
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=254.91 Aligned_cols=244 Identities=18% Similarity=0.316 Sum_probs=180.5
Q ss_pred hcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++.|++.++||+|.|+.||++. .++|+.+|+|.+...+ ....+++++|+.|.+.++|||||+|..-+.+.+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~------ 83 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 83 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc------
Confidence 4567778899999999999986 4679999999886543 345788999999999999999999998766543
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC---CcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~ 635 (766)
..|||+|+|.+|+|..-+-++ ...+....-.++.||.++|.|+|.+ +|||||+||+|+|+... --+|++
T Consensus 84 --~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 84 --FHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred --eeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeec
Confidence 789999999999997655433 2345566677899999999999998 89999999999999743 359999
Q ss_pred cCCCCcccccccccccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 636 DYGLSIVSEDINSVGGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 636 DFGla~~~~~~~~~~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
|||+|+...+.....+..+.|. ...+++..+|||+.|||||-++.|..||..... .+.+..+.. ...++
T Consensus 156 ~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--~rlye~I~~--g~yd~ 231 (355)
T KOG0033|consen 156 DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYEQIKA--GAYDY 231 (355)
T ss_pred ccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--HHHHHHHhc--cccCC
Confidence 9999987663322222222222 234566788999999999999999999874221 121222211 12233
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..|.+ ....+ ...+|+.+++..||.+|-|+.|.++
T Consensus 232 ~~~~w-~~is~----~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 232 PSPEW-DTVTP----EAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CCccc-CcCCH----HHHHHHHHHhccChhhhccHHHHhC
Confidence 22232 22222 2568899999999999999988764
No 327
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=9.6e-30 Score=272.81 Aligned_cols=248 Identities=18% Similarity=0.208 Sum_probs=173.0
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
.+.+|.|+++.||+++. +++.||||++... .....+.+.+|++++++++||||+++++++.+.+ ..+++
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~--------~~~~~ 77 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS--------ELYVV 77 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC--------eEEEE
Confidence 34455556666666654 6899999998654 3445678999999999999999999999987653 68999
Q ss_pred EEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccc
Q 004232 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSED 645 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~ 645 (766)
|||+++|+|.+++.+... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+.....
T Consensus 78 ~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~ 153 (314)
T cd08216 78 SPLMAYGSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIK 153 (314)
T ss_pred EeccCCCCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecc
Confidence 999999999999876432 3478888889999999999999997 899999999999999999999999998754321
Q ss_pred ccc-------cc----cC--CCCCCc----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc------
Q 004232 646 INS-------VG----GK--QEDPNS----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ------ 702 (766)
Q Consensus 646 ~~~-------~~----~~--~~~~~~----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~------ 702 (766)
... .. .. ...|.. ...++.++|||||||++|||++|+.||...... ..........
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 232 (314)
T cd08216 154 HGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT-QMLLEKVRGTVPCLLD 232 (314)
T ss_pred ccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCccccc
Confidence 110 00 00 001111 123456899999999999999999998643211 1111111000
Q ss_pred -c-------Cccc----cccccccC----CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 -E-------GRQR----LVDPVVMA----TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 -~-------~~~~----~~d~~~~~----~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. .... ..++.... .........+.+++.+||+.||++|||++|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 0 0000 00110000 0011122457889999999999999999999875
No 328
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=6.5e-30 Score=271.74 Aligned_cols=246 Identities=22% Similarity=0.319 Sum_probs=176.0
Q ss_pred hcCCCcCCceecCCceeEEEEEecC-CceEEEEEccCCh-hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|...+ ++.||||.++... .....++.+|+.++.+.. ||||++++|+|.+..
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~------ 87 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS------ 87 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC------
Confidence 3567888999999999999999764 8999999987543 233456667777777665 999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++ ++..+..... ..+++..+..++.+++.|++|||+. .+|+||||+|+||++++++.+||+|||
T Consensus 88 --~~~~v~e~~~~-~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 88 --DVFICMELMST-CLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred --eEEEEeeccCc-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccc
Confidence 68999999864 6766654422 2588999999999999999999974 279999999999999999999999999
Q ss_pred CCcccccccccccC-----CCCCCcc------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 639 LSIVSEDINSVGGK-----QEDPNSW------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 639 la~~~~~~~~~~~~-----~~~~~~~------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
++............ ...|..+ ...+.++|||||||++|||++|+.|+...... .+....+... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~-~~~~ 238 (296)
T cd06618 161 ISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLTKILQE-EPPS 238 (296)
T ss_pred cchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHHHHhcC-CCCC
Confidence 98654321111000 0111111 12456899999999999999999998642211 1111111111 1111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.... . ....+.+++.+||+.||.+||++.+|++.
T Consensus 239 ~~~~~---~----~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 LPPNE---G----FSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCC---C----CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11100 1 11246789999999999999999999866
No 329
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=4.8e-30 Score=270.98 Aligned_cols=252 Identities=22% Similarity=0.311 Sum_probs=179.3
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|++.+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++|||++++++++.+.+ ...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~------~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG------KGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC------CCc
Confidence 556788999999999999865 58999999997653 333567888999999999999999999998752 126
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||+++ +|..++.... ..+++..+..++.++++||+|||+. +++|+||||+||++++++.+||+|||++.
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 75 IYMVFEYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred EEEEeccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 8999999985 8888876542 3588999999999999999999987 89999999999999999999999999986
Q ss_pred ccccccc--c----c---cCCCCCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc---Cccc
Q 004232 642 VSEDINS--V----G---GKQEDPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE---GRQR 707 (766)
Q Consensus 642 ~~~~~~~--~----~---~~~~~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~---~~~~ 707 (766)
....... . . ...++... ....+.++|||||||++|||+||+.|+....... ........... ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 149 PYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPG 228 (287)
T ss_pred eccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccc
Confidence 5433211 0 0 01111101 1234568999999999999999999986433211 11111100000 0000
Q ss_pred ccc--------cccc------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 708 LVD--------PVVM------ATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 708 ~~d--------~~~~------~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+.+ +... ..........+.+++.+||..+|.+||++.++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 0000 0000001345789999999999999999999975
No 330
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=9.6e-30 Score=264.95 Aligned_cols=240 Identities=18% Similarity=0.220 Sum_probs=170.6
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHHH-HHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~~-l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|.. .+|+.||||.++.... .....+..|..+ ....+|||++++++++.+.+ ..+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~--------~~~ 73 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD--------YLY 73 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC--------eEE
Confidence 4689999999999986 4689999999865432 222334455444 44558999999999987653 689
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||+++|+|.+++.... .+++.....++.|++.||.|||+. +++||||+|+||++++++.+||+|||++...
T Consensus 74 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 74 LVMEYLNGGDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEEeccCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 9999999999999987543 478888999999999999999997 8999999999999999999999999998653
Q ss_pred cccccc----ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCH
Q 004232 644 EDINSV----GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSL 719 (766)
Q Consensus 644 ~~~~~~----~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 719 (766)
...... ....++......++.++||||||+++|||+||..|+..... ...+..+.... . .. .+....
T Consensus 148 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~-~-~~-~~~~~~---- 218 (260)
T cd05611 148 LENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--DAVFDNILSRR-I-NW-PEEVKE---- 218 (260)
T ss_pred cccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcc-c-CC-CCcccc----
Confidence 321111 11111111122356789999999999999999999864322 11111111100 0 00 000000
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 004232 720 ESLSIVISIANKCICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 720 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~ 751 (766)
.....+.+++.+||+.+|++||++.++.+.|.
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 11234789999999999999998876655443
No 331
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=7.9e-30 Score=270.46 Aligned_cols=236 Identities=20% Similarity=0.312 Sum_probs=175.8
Q ss_pred CceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEE
Q 004232 489 AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYE 567 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~E 567 (766)
..||+|+||.||+|.. .+++.||||++..........+.+|+.++++++||||+++++++...+ ..++|||
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--------~~~lv~e 97 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--------ELWVVME 97 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC--------EEEEEEe
Confidence 5789999999999986 478999999986555555677899999999999999999999988753 7899999
Q ss_pred ccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccc
Q 004232 568 FMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN 647 (766)
Q Consensus 568 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~ 647 (766)
|+++++|.+++... .+++.....++.+++.|++|||+. +++||||||+||++++++.+||+|||++.......
T Consensus 98 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 98 FLEGGALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred cCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 99999999987532 378899999999999999999997 89999999999999999999999999875432211
Q ss_pred cc-----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCH
Q 004232 648 SV-----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSL 719 (766)
Q Consensus 648 ~~-----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 719 (766)
.. + ...++.......+.++|||||||++|||++|..|+...... .....+. ......+.. . ..
T Consensus 171 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~-~~~~~~~~~--~-~~--- 241 (292)
T cd06657 171 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIR-DNLPPKLKN--L-HK--- 241 (292)
T ss_pred ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH-hhCCcccCC--c-cc---
Confidence 00 0 11111111223456899999999999999999998632221 1111111 000000000 0 00
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 720 ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 720 ~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+.+++.+||+.+|.+||++.+|++.
T Consensus 242 -~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 -VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred -CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 11236688999999999999999999874
No 332
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=3e-30 Score=276.79 Aligned_cols=193 Identities=19% Similarity=0.341 Sum_probs=149.1
Q ss_pred CCcCCceecCCceeEEEEEec---CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|++.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.++++++||||+++++++.+...
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----- 76 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHAD----- 76 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCC-----
Confidence 677889999999999999964 47899999997633 3334667889999999999999999999987521
Q ss_pred cceEEEEEEccCCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC----CCcE
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTP--GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE----HRIA 632 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~----~~~~ 632 (766)
...++||||+++ ++.+.+..... ...++......++.|++.|++|||+. +|+||||||+||+++. ++.+
T Consensus 77 -~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~ 151 (316)
T cd07842 77 -KSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVV 151 (316)
T ss_pred -ceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceE
Confidence 368999999986 66666543221 12577888899999999999999987 8999999999999999 8999
Q ss_pred EEecCCCCccccccccc--c-----cCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 633 KLSDYGLSIVSEDINSV--G-----GKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~--~-----~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
||+|||++......... . ... ..|.. ....+.++|||||||++|||++|+.|+..
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 218 (316)
T cd07842 152 KIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKG 218 (316)
T ss_pred EECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence 99999998654322110 0 000 01111 12345678999999999999999999863
No 333
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=7.1e-30 Score=264.93 Aligned_cols=242 Identities=19% Similarity=0.282 Sum_probs=181.9
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+++. .+++.+|+|.+.... .....++.+|++++++++||||+++++++.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGN-------- 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC--------
Confidence 477788999999999999975 468899999987532 334567788999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+++++|.+++.+.. ....+++.....++.+++.|++|||+. +++||||+|+||++++++.+|++|||+
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~ 149 (256)
T cd08530 73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGI 149 (256)
T ss_pred EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccc
Confidence 7899999999999999886532 224588999999999999999999987 899999999999999999999999999
Q ss_pred Cccccccccccc------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 640 SIVSEDINSVGG------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 640 a~~~~~~~~~~~------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
+........... ..++......++.++|+||||+++|||++|+.|+...... .....+ .......+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~-~~~~~~~~----- 221 (256)
T cd08530 150 SKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKV-QRGKYPPI----- 221 (256)
T ss_pred hhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-hcCCCCCC-----
Confidence 865433211100 0111111233456899999999999999999998643321 111111 11111111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.......+.+++.+|++.+|.+||++.|+++
T Consensus 222 ----~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 222 ----PPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----chhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1122344789999999999999999999975
No 334
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=3.2e-30 Score=276.68 Aligned_cols=242 Identities=22% Similarity=0.329 Sum_probs=183.3
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.+..|.+...||+|.|++|..|+. .+|..||||.+.+.. ....+.+.+|+++|+.++|||||+++.+.....
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~----- 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA----- 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc-----
Confidence 456788999999999999999985 469999999997653 333456899999999999999999999988653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.+|+||||+.+|.+++|+.++... .......++.|+..|++|||++ .|+|||||++|||||.++++||+||
T Consensus 129 ---~lylV~eya~~ge~~~yl~~~gr~---~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDf 199 (596)
T KOG0586|consen 129 ---TLYLVMEYASGGELFDYLVKHGRM---KEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADF 199 (596)
T ss_pred ---eeEEEEEeccCchhHHHHHhcccc---hhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeecc
Confidence 799999999999999999887542 3366777889999999999998 7899999999999999999999999
Q ss_pred CCCccccccccccc---CCC----CC-CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVGG---KQE----DP-NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~~---~~~----~~-~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++..........+ .++ +. .......+++|+||+||++|-|+.|.-||+.. .+...-.... . ...++
T Consensus 200 gfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~--~lk~Lr~rvl-~-gk~rI- 274 (596)
T KOG0586|consen 200 GFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ--NLKELRPRVL-R-GKYRI- 274 (596)
T ss_pred ccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc--ccccccchhe-e-eeecc-
Confidence 99976643222111 111 11 11133456899999999999999999999732 2211100000 0 01111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
|..+. ..+.+++.+.+..+|.+|+++++|.+.
T Consensus 275 -p~~ms-------~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 275 -PFYMS-------CDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred -cceee-------chhHHHHHHhhccCccccCCHHHhhhh
Confidence 11111 125678889999999999999999864
No 335
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.2e-29 Score=266.91 Aligned_cols=233 Identities=18% Similarity=0.226 Sum_probs=169.9
Q ss_pred eecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||+||++.. .+|+.||+|.+.... ....+.+..|++++++++||||+++++++...+ ..++||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~~~lv~ 72 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD--------DLCLVM 72 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC--------eEEEEE
Confidence 69999999999985 468999999986532 223455678999999999999999999887653 689999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++|+|.+++.+... ..+++..+..++.+++.|+.|||+. +++||||||+||++++++.+|++|||++......
T Consensus 73 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 73 TLMNGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred ecCCCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 99999999999876542 3588999999999999999999997 8999999999999999999999999998654321
Q ss_pred ccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCccccccccccCCCC
Q 004232 647 NSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQRLVDPVVMATSS 718 (766)
Q Consensus 647 ~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~ 718 (766)
... ....++.......+.++|||||||++|||++|+.|+...... ....+...... .... .....
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~- 221 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-MAVE-----YPDKF- 221 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-cccc-----CCccC-
Confidence 110 011111111123556799999999999999999998643321 11111111000 0000 00111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHH
Q 004232 719 LESLSIVISIANKCICSESWSRPSFED 745 (766)
Q Consensus 719 ~~~~~~~~~l~~~C~~~~p~~RPs~~e 745 (766)
...+.+++.+||+.+|.+||+++|
T Consensus 222 ---~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 222 ---SPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ---CHHHHHHHHHHccCChhHccCCCc
Confidence 123678899999999999995555
No 336
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=4.6e-30 Score=276.84 Aligned_cols=256 Identities=20% Similarity=0.309 Sum_probs=180.3
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
...+++|+..+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--- 82 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL--- 82 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC---
Confidence 34678899999999999999999984 47899999987542 2233567888999999999999999999887643
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
...++|+||+ +++|..++... .+++.....++.++++||+|||+. +|+||||||+||++++++.+||+
T Consensus 83 ----~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~ 150 (328)
T cd07856 83 ----EDIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKIC 150 (328)
T ss_pred ----CcEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeC
Confidence 3579999998 46898887642 367788888999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccccc--c---cCCCCC-CcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhc-------
Q 004232 636 DYGLSIVSEDINSV--G---GKQEDP-NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNS------- 701 (766)
Q Consensus 636 DFGla~~~~~~~~~--~---~~~~~~-~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~------- 701 (766)
|||++......... + ...++. .....++.++|||||||++|||+||+.|+....... ...+.....
T Consensus 151 dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 151 DFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred ccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99998654321110 0 111111 111235667999999999999999999886432110 000000000
Q ss_pred ----ccCcccccccc-ccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 ----QEGRQRLVDPV-VMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 ----~~~~~~~~d~~-~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....++.... .....+. .....+.+++.+|++.+|++||++.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000 0000000 011347789999999999999999999876
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=7e-30 Score=273.26 Aligned_cols=256 Identities=18% Similarity=0.245 Sum_probs=179.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|... +|+.||+|.++.... .....+.+|+.++++++|+||+++++++.+...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHL----- 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCC-----
Confidence 467889999999999999999864 689999999864322 223356679999999999999999999875421
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
+..++||||+++ +|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 81 -~~~~lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 81 -DSIFLVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred -CeEEEEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 357999999975 7888776532 3589999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc--------cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc--C--
Q 004232 639 LSIVSEDINSVG--------GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE--G-- 704 (766)
Q Consensus 639 la~~~~~~~~~~--------~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~--~-- 704 (766)
++.......... +..++.. .....+.++|||||||++|||++|+.|+....... ...+....... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 154 LARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred eeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 986543221100 0111110 11234567999999999999999999986432211 11111100000 0
Q ss_pred --------ccccc-cccccCCCC---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 --------RQRLV-DPVVMATSS---LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 --------~~~~~-d~~~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+. ......... ......+.+++.+|++.||++|||+.||++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000 000000000 0012346789999999999999999999864
No 338
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=1.7e-29 Score=262.10 Aligned_cols=242 Identities=20% Similarity=0.322 Sum_probs=183.6
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++++++|||++++++.+.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~-------- 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG-------- 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC--------
Confidence 4777889999999999999964 68899999987543 245677889999999999999999999887653
Q ss_pred eEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++|+||+++++|.+++.+.. ....+++.....++.+++.|++|||+. +++|+||+|+||++++++.+||+|||+
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~ 149 (258)
T cd08215 73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGI 149 (258)
T ss_pred EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccc
Confidence 6899999999999999987642 124589999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+.......... ...++.......+.++||||+|+++|||++|+.|+..... ......... .....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~~~--- 223 (258)
T cd08215 150 SKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--LELALKILK-GQYPPI--- 223 (258)
T ss_pred eeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--HHHHHHHhc-CCCCCC---
Confidence 86543322110 0111111123355689999999999999999999864331 111111111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.... ...+.+++.+||..+|++||++.|+++
T Consensus 224 --~~~~----~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 224 --PSQY----SSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --CCCC----CHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1111 133678999999999999999999975
No 339
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.4e-29 Score=274.89 Aligned_cols=261 Identities=16% Similarity=0.260 Sum_probs=181.0
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++...... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSG--DE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccC--CC
Confidence 36788899999999999999985 478999999986432 22345678899999999999999999998754311 11
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++|+||+.. ++..+.. ..+++.....++.+++.||+|||+. +++||||||+||+++.++.+|++|||
T Consensus 92 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 92 FQDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred CceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 2357999999975 7766542 2378889999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc--c---cCCCCC-CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc--C------
Q 004232 639 LSIVSEDINSV--G---GKQEDP-NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE--G------ 704 (766)
Q Consensus 639 la~~~~~~~~~--~---~~~~~~-~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~--~------ 704 (766)
+++........ + ...++. ......+.++|||||||++|||++|+.||..... ...+..+.... .
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 163 LARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHH
Confidence 98654321110 0 011111 1112356689999999999999999999874321 11111110000 0
Q ss_pred ------cccccc--ccccCCC-C---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHHh
Q 004232 705 ------RQRLVD--PVVMATS-S---LESLSIVISIANKCICSESWSRPSFEDILWN--LQYAAQ 755 (766)
Q Consensus 705 ------~~~~~d--~~~~~~~-~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~~~~ 755 (766)
.....+ +...... . ......+.+++.+||+.||.+||+++||+.. ++....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000 0000000 0 0011346789999999999999999999855 655543
No 340
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=1.5e-29 Score=274.16 Aligned_cols=261 Identities=18% Similarity=0.280 Sum_probs=182.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+.|.+.+.||+|+||.||+|+. .++..||||++... .......+.+|+.++++++||||+++++++...... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~---~~ 81 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE---AF 81 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccc---cc
Confidence 4688889999999999999985 46899999998653 223345677899999999999999999988754211 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++|+||+. ++|.+++.... .+++.....++.+++.||.|||+. +++||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 82 NDVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred CcEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 35799999997 68888886542 488999999999999999999987 899999999999999999999999999
Q ss_pred Cccccccccc-----ccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcc---cCc-
Q 004232 640 SIVSEDINSV-----GGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQ---EGR- 705 (766)
Q Consensus 640 a~~~~~~~~~-----~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~---~~~- 705 (766)
+......... +... ..|.. ....+.++|||||||++|||++|+.||....... ...+...... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07858 155 ARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLG 234 (337)
T ss_pred ccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 8654322110 0000 01111 1235568999999999999999999986432110 0000000000 000
Q ss_pred -------ccc-------ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHH
Q 004232 706 -------QRL-------VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN--LQYAA 754 (766)
Q Consensus 706 -------~~~-------~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~~~ 754 (766)
.+. .++.... ........+.+++.+||+.+|++||+++|+++. ++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 235 FIRNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hcCchhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 000 0000000 000122447899999999999999999999977 55443
No 341
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=9.5e-30 Score=272.20 Aligned_cols=261 Identities=16% Similarity=0.261 Sum_probs=178.8
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+..+.....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999864 689999998854322 22345678999999999999999999887654211111
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...+++|+||+.+ ++...+.... ..+++.....++.++++||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCc
Confidence 2358999999986 6766665432 3488999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc-------------------cCCCCC-CcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHh
Q 004232 639 LSIVSEDINSVG-------------------GKQEDP-NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELD 697 (766)
Q Consensus 639 la~~~~~~~~~~-------------------~~~~~~-~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~ 697 (766)
++.......... ...++. ......+.++|||||||++|||++|+.|+....... ...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 986543211100 000110 011234567899999999999999999986432211 11111
Q ss_pred hhhccc---------Ccccccccccc---CCCCH----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 698 SLNSQE---------GRQRLVDPVVM---ATSSL----ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 698 ~~~~~~---------~~~~~~d~~~~---~~~~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...... ......+.... ..... .....+.+++.+|++.||.+|||+.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 100000 00000000000 00000 11245789999999999999999999864
No 342
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.9e-29 Score=272.58 Aligned_cols=260 Identities=17% Similarity=0.248 Sum_probs=185.8
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+... ....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~~ 77 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSP---EDFN 77 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCc---cccc
Confidence 4777899999999999999964 58999999987543 3445778999999999999999999999887531 1123
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++ +|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 78 ~~~lv~e~~~~-~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 78 DVYIVTELMET-DLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred ceEEEecchhh-hHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 68999999994 8988886543 588999999999999999999997 8999999999999999999999999998
Q ss_pred cccccccc----c----c---cCCCCCCccc-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-c----
Q 004232 641 IVSEDINS----V----G---GKQEDPNSWE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-E---- 703 (766)
Q Consensus 641 ~~~~~~~~----~----~---~~~~~~~~~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~---- 703 (766)
........ . + ...++..... ..+.++|||||||++|||++|+.||...... .....+... +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~ 228 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSE 228 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCCh
Confidence 65433210 0 0 0111111112 4566899999999999999999998643321 111111000 0
Q ss_pred ---------Cccccccc-cccCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHHh
Q 004232 704 ---------GRQRLVDP-VVMATSS-----LESLSIVISIANKCICSESWSRPSFEDILWN--LQYAAQ 755 (766)
Q Consensus 704 ---------~~~~~~d~-~~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~~~~ 755 (766)
........ ....... ......+.+++.+||+.+|.+||++.+++.. ++....
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 00000000 0000000 0012347789999999999999999999986 665544
No 343
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=2.4e-29 Score=265.77 Aligned_cols=254 Identities=20% Similarity=0.241 Sum_probs=175.6
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhC---CCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l---~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|++.+.||+|+||.||+|+.. ++..||+|.++.... .....+.+|+.+++++ +|||++++++++.+.+.. .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~---~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTD---R 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCC---C
Confidence 566789999999999999976 489999999864322 2234566787777665 699999999999875411 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....+++|||+++ +|.+++..... ..+++..+..++.+++.||+|||+. +++|+||||+||++++++.+||+|||
T Consensus 78 ~~~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 78 ELKLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred CceeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 1248999999985 89888865432 3489999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc----ccC---
Q 004232 639 LSIVSEDINSVG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS----QEG--- 704 (766)
Q Consensus 639 la~~~~~~~~~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~----~~~--- 704 (766)
++.......... ...++.......+.++|||||||++|||+||..|+..... .+....+.. ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07838 153 LARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE--ADQLDKIFDVIGLPSEEEW 230 (287)
T ss_pred cceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh--HHHHHHHHHHcCCCChHhc
Confidence 986543221110 0111111123456689999999999999999888764321 111111110 000
Q ss_pred ccc------cccccccCCC---CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 705 RQR------LVDPVVMATS---SLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 705 ~~~------~~d~~~~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... .......... ..+-...+.+++.+||+.||++||++.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 231 PRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000 0000000000 0111245678999999999999999999874
No 344
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=3.5e-29 Score=268.29 Aligned_cols=240 Identities=21% Similarity=0.307 Sum_probs=175.7
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|...+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|++++++++|||++++++++.+..
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 94 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-------- 94 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC--------
Confidence 44457799999999999985 468899999986432 233467888999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+. |++.+++.... ..+++..+..++.+++.|++|||+. +++||||||+||+++.++.+||+|||++
T Consensus 95 ~~~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 95 TAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 6899999996 57777765432 3488999999999999999999987 8999999999999999999999999998
Q ss_pred cccccccccccC--CCCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 641 IVSEDINSVGGK--QEDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 641 ~~~~~~~~~~~~--~~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
..........+. ...|.. ....+.++|||||||++|||++|..|+...... .......... ......+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~-~~~~~~~-- 243 (313)
T cd06633 169 SKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQND-SPTLQSN-- 243 (313)
T ss_pred cccCCCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhcC-CCCCCcc--
Confidence 543222111111 011111 123456789999999999999999997643221 1111111111 1111111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ..+.+++.+||+.+|.+||++.+++..
T Consensus 244 --~~~----~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 244 --EWT----DSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --ccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 236788999999999999999999864
No 345
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=1.2e-29 Score=268.42 Aligned_cols=245 Identities=22% Similarity=0.271 Sum_probs=178.3
Q ss_pred CCCcCCceecCCceeEEEEEe----cCCceEEEEEccCCh----hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
+|++.+.||+|+||.||+++. .+++.||||.++... ....+.+.+|++++.++ +||||+++++.+....
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-- 78 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-- 78 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC--
Confidence 467788999999999999874 357889999986532 22345688899999999 5999999998876643
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++|+|.+++.... .+++.....++.|+++||+|||+. +++||||||+||+++.++.+|+
T Consensus 79 ------~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 79 ------KLHLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred ------EEEEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 6899999999999999887542 478888899999999999999986 8999999999999999999999
Q ss_pred ecCCCCccccccccc------c---cCCCCCCccc--CCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHH-hhhhc
Q 004232 635 SDYGLSIVSEDINSV------G---GKQEDPNSWE--MTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEEL-DSLNS 701 (766)
Q Consensus 635 ~DFGla~~~~~~~~~------~---~~~~~~~~~~--~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~-~~~~~ 701 (766)
+|||++......... + ...++..... ..+.++||||||+++|||+||..|+...... ....+ ..+..
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 226 (288)
T cd05583 147 TDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK 226 (288)
T ss_pred EECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc
Confidence 999998653221110 0 0011110111 2456889999999999999999998532211 11111 11111
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
. ++...... ...+.+++.+||+.+|++|||+.+|...|+..
T Consensus 227 ~-------~~~~~~~~----~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 227 S-------KPPFPKTM----SAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred c-------CCCCCccc----CHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 00000111 12367889999999999999999888777643
No 346
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=1.6e-29 Score=268.52 Aligned_cols=252 Identities=17% Similarity=0.249 Sum_probs=175.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+.. +|+.||+|.+..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK------- 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-------
Confidence 46888899999999999999864 689999998864322 23456888999999999999999999988653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYG 638 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFG 638 (766)
..++||||++ +++.+++..... ...++.....++.+|+.||+|||+. +++||||||+||++++ ++.+||+|||
T Consensus 75 -~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 75 -RLYLVFEYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred -eEEEEEeccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 6899999996 578877754332 2356777888999999999999997 8999999999999985 5679999999
Q ss_pred CCccccccccc-c----cCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-c-Cccc
Q 004232 639 LSIVSEDINSV-G----GKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-E-GRQR 707 (766)
Q Consensus 639 la~~~~~~~~~-~----~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~-~~~~ 707 (766)
++......... . ... ..|.. ....+.++|||||||++|||+||+.|+..... .+....+... . ....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~ 226 (294)
T PLN00009 149 LARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE--IDELFKIFRILGTPNEE 226 (294)
T ss_pred cccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChh
Confidence 98643221110 0 000 01111 12345679999999999999999999864321 1111111000 0 0000
Q ss_pred c-------cc-----ccccCCC----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 L-------VD-----PVVMATS----SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~-------~d-----~~~~~~~----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. .+ +...... .......+.+++.+|++.+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 227 TWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00 0000000 00011236789999999999999999999864
No 347
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=2.2e-29 Score=263.48 Aligned_cols=243 Identities=14% Similarity=0.184 Sum_probs=173.0
Q ss_pred HHHHHHhcCCCcCCce--ecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 476 EELKEATNNFDMSAIM--GEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~l--G~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
.+.....++|++.+.+ |+|+||.||+++. .++..+|+|.+....... . |+.....+ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecC
Confidence 4445556677777776 9999999999985 468889999886532211 1 22222212 799999999998875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR- 630 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~- 630 (766)
+ ..++||||+++|+|.+++.... .++|.....++.|+++|++|||+. +++||||||+||+++.++
T Consensus 82 ~--------~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~ 147 (267)
T PHA03390 82 K--------GHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKD 147 (267)
T ss_pred C--------eeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCC
Confidence 3 6899999999999999997653 589999999999999999999997 899999999999999988
Q ss_pred cEEEecCCCCccccccccccc----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchH--HHHhhhhcccC
Q 004232 631 IAKLSDYGLSIVSEDINSVGG----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ--EELDSLNSQEG 704 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~~~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~--~~~~~~~~~~~ 704 (766)
.+||+|||++..........+ ..++.......+.++|||||||++|||++|+.|+........ ..+.... ..
T Consensus 148 ~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~- 225 (267)
T PHA03390 148 RIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK- 225 (267)
T ss_pred eEEEecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc-
Confidence 999999999865433211111 112212223456689999999999999999999864322111 1111110 00
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPS-FEDILW 748 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~ 748 (766)
..... . ..-..+.+++.+|++.+|.+||+ ++|+++
T Consensus 226 ~~~~~-----~----~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 KLPFI-----K----NVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cCCcc-----c----ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00000 0 11233678899999999999995 688864
No 348
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=1.3e-29 Score=267.13 Aligned_cols=248 Identities=21% Similarity=0.305 Sum_probs=179.0
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|+..+.||+|++|.||+|... +++.+|+|.++.... .....+.+|++++++++||||+++++++.+.+ .
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------~ 72 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG--------D 72 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC--------C
Confidence 456688999999999999864 689999999865432 24567888999999999999999999988653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||+++ ++.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||.+.
T Consensus 73 ~~~v~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 73 LYLVFEFMDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEEEEeccCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 8999999985 8888876543 3588999999999999999999997 89999999999999999999999999986
Q ss_pred cccccc-cc----cc---CCCCCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc------cCcc
Q 004232 642 VSEDIN-SV----GG---KQEDPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ------EGRQ 706 (766)
Q Consensus 642 ~~~~~~-~~----~~---~~~~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~------~~~~ 706 (766)
...... .. .. ..++... ....+.++|||||||++|||+||+.|+...... +.+..+... ....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 224 (283)
T cd05118 147 SFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI--DQLFKIFRTLGTPDPEVWP 224 (283)
T ss_pred ecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCchHhcc
Confidence 543321 00 00 1111111 124567899999999999999999988643321 111111000 0000
Q ss_pred cc-----------ccccccC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 707 RL-----------VDPVVMA--TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 707 ~~-----------~d~~~~~--~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+ .+..... .........+.+++.+||+.||.+||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 225 KFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00 0000000 000112345789999999999999999999975
No 349
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.97 E-value=1.3e-29 Score=274.97 Aligned_cols=191 Identities=23% Similarity=0.328 Sum_probs=156.6
Q ss_pred CCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-C-----CCcccccceeecCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-H-----PHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-H-----pniv~l~g~~~~~~~~~~ 556 (766)
.|++.++||+|.||.|.||. ..+++.||||+++.... ..++-..|+.+|..++ | -|+|++++|+...+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~---- 261 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN---- 261 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc----
Confidence 68899999999999999998 45799999999987654 3455677999999997 4 48999999998763
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC--CcEEE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH--RIAKL 634 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--~~~kl 634 (766)
+.|||+|.+.. +|+++++.+.. ..++......++.||+.||.+||+. +|||+||||+||||.+. ..+||
T Consensus 262 ----HlciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 262 ----HLCIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred ----ceeeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 89999999887 99999987653 4588899999999999999999987 89999999999999753 47999
Q ss_pred ecCCCCccccccc-----ccccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 635 SDYGLSIVSEDIN-----SVGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 635 ~DFGla~~~~~~~-----~~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
.|||.|-...... +..++.++..-..++..+.|+||||||+.||+||.+-|...
T Consensus 333 IDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 333 IDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 9999986543321 12233344444567788999999999999999997767643
No 350
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=1.4e-29 Score=266.44 Aligned_cols=239 Identities=18% Similarity=0.319 Sum_probs=179.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|.+.+.||+|+||.||+|+.. +|+.||+|.+.... ....+.+.+|++++++++ ||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~----- 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE----- 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc-----
Confidence 36888899999999999999864 79999999986532 233467888999999998 999999999887653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +++|+||||+||+++.++.++++||
T Consensus 76 ---~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 ---NLYFVLEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred ---eEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 6899999999999999997653 489999999999999999999987 8999999999999999999999999
Q ss_pred CCCccccccccc------------------c----------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCc
Q 004232 638 GLSIVSEDINSV------------------G----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKG 689 (766)
Q Consensus 638 Gla~~~~~~~~~------------------~----------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~ 689 (766)
|++......... . ...++.......+.++||||||++++|+++|+.|+....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 998654322110 0 000000011234557899999999999999999987443
Q ss_pred cchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH----HHHHH
Q 004232 690 QFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSF----EDILW 748 (766)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~----~ev~~ 748 (766)
.. .....+.... ..+ + ... ...+.+++.+||+.+|.+||++ +|+++
T Consensus 227 ~~--~~~~~~~~~~--~~~--~---~~~----~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 227 EY--LTFQKILKLE--YSF--P---PNF----PPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HH--HHHHHHHhcC--CCC--C---Ccc----CHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 21 1111111100 000 0 011 2337789999999999999999 66653
No 351
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=2.9e-29 Score=265.86 Aligned_cols=241 Identities=22% Similarity=0.331 Sum_probs=174.5
Q ss_pred CCCcCCceecCCceeEEEEEe----cCCceEEEEEccCChh----hhHHHHHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSKK----YTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~~----~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
+|++.+.||+|+||.||+++. .+|..||+|+++.... ...+.+.+|+++++++ +||||+++++++....
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-- 78 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT-- 78 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC--
Confidence 467788999999999999985 4689999999875322 2346788899999999 5999999998877642
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++|+|.+++.... .+++.....++.++++||+|||+. +++||||||+||++++++.+||
T Consensus 79 ------~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 79 ------KLHLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred ------eEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 6899999999999999987543 377888888899999999999987 8999999999999999999999
Q ss_pred ecCCCCccccccccc------ccCC-CCCCcc----cCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcc
Q 004232 635 SDYGLSIVSEDINSV------GGKQ-EDPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQ 702 (766)
Q Consensus 635 ~DFGla~~~~~~~~~------~~~~-~~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~ 702 (766)
+|||++......... +... ..|... ...+.++|||||||++|||+||+.|+...... ....+......
T Consensus 147 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 226 (290)
T cd05613 147 TDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK 226 (290)
T ss_pred eeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc
Confidence 999998654321100 0000 011111 12356789999999999999999998632211 11111111000
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
. .+.... .....+.+++.+||+.||++|| +.++++.
T Consensus 227 ~------~~~~~~----~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 227 S------EPPYPQ----EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred c------CCCCCc----cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0 000000 1113467889999999999997 6666654
No 352
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=2.1e-29 Score=273.72 Aligned_cols=266 Identities=17% Similarity=0.266 Sum_probs=184.6
Q ss_pred CHHHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeec
Q 004232 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (766)
Q Consensus 474 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~ 550 (766)
...++...+++|+..+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456677889999999999999999999984 578999999986532 2334667889999999999999999998865
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
.... ......++++|++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 88 ~~~~--~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 88 ARSL--EEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred cccc--cccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 3210 0113468888876 77998877542 388999999999999999999997 899999999999999999
Q ss_pred cEEEecCCCCccccccccc-ccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcc-
Q 004232 631 IAKLSDYGLSIVSEDINSV-GGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQ- 702 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~-~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~- 702 (766)
.+||+|||++......... .... ..|. .....+.++|||||||++|||++|+.|+....... ..........
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 237 (345)
T cd07877 158 ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237 (345)
T ss_pred CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9999999998654322110 0000 0111 11234568999999999999999999986332111 1111000000
Q ss_pred --cCccccccc----------cccCCCC----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 --EGRQRLVDP----------VVMATSS----LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 --~~~~~~~d~----------~~~~~~~----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+.+. ....... ...-..+.+++.+|++.||.+||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000000 0000000 0012346799999999999999999999865
No 353
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=4.9e-29 Score=262.54 Aligned_cols=236 Identities=21% Similarity=0.295 Sum_probs=167.9
Q ss_pred ceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHH---HHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 490 IMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLR---LDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e---~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+||+|+||.||+|+. .+++.||+|++..... .....+..| +..++...||||+++++++.+.+ ..
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~~ 72 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD--------KL 72 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC--------EE
Confidence 489999999999985 4689999998864321 111223333 34455568999999998887653 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++... ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 73 ~~v~e~~~g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 73 SFILDLMNGGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 9999999999999988654 2489999999999999999999997 899999999999999999999999999864
Q ss_pred cccccc---cccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 643 SEDINS---VGGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 643 ~~~~~~---~~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
...... .+... ..|.. ...++.++|||||||++|||++|+.|+................. .++....
T Consensus 147 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~ 220 (278)
T cd05606 147 FSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT------MAVELPD 220 (278)
T ss_pred cCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc------cCCCCCC
Confidence 322111 11100 01111 12356789999999999999999999864322111111111100 1111111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
.. ...+.+++.+|+..+|.+|| ++.++++.
T Consensus 221 ~~----s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 221 SF----SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred cC----CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 11 13477889999999999999 89888753
No 354
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=2e-29 Score=262.49 Aligned_cols=241 Identities=17% Similarity=0.271 Sum_probs=173.2
Q ss_pred CCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-----hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-----KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-----~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.|.+.+.||+|+||.||+++.. .+..+++|.++.. ......++.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD----- 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-----
Confidence 3677889999999999999854 3445666655432 1223445778899999999999999999987653
Q ss_pred CcceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++++|..++.+. .....+++..+..++.+++.|+.|||+. +++|+||||+||++++ +.+|++|
T Consensus 76 ---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d 148 (260)
T cd08222 76 ---AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGD 148 (260)
T ss_pred ---ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecc
Confidence 579999999999999888642 2234589999999999999999999987 8999999999999985 5699999
Q ss_pred CCCCcccccccccc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSVG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~~--------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||++.......... ...++......++.++||||||+++|||++|..|+..... ......... ...
T Consensus 149 ~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~~-~~~--- 222 (260)
T cd08222 149 FGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIVE-GPT--- 222 (260)
T ss_pred cCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHc-CCC---
Confidence 99986543211110 0011111113345679999999999999999999863221 111111111 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+.. .......+.+++.+||..+|++||++.||++
T Consensus 223 --~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 223 --PSL----PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CCC----cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 111 1112234778999999999999999999975
No 355
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=1.5e-29 Score=268.64 Aligned_cols=252 Identities=12% Similarity=0.140 Sum_probs=162.6
Q ss_pred cCCCcCCceecCCceeEEEEEecC----CceEEEEEccCChhhh-----------HHHHHHHHHHHHhCCCCCcccccce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSKKYT-----------VRNLKLRLDLLAKLRHPHLVCLLGH 547 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~-----------~~~~~~e~~~l~~l~Hpniv~l~g~ 547 (766)
+.|++.++||+|+||+||+|+..+ +..+|+|......... ......+...+..++|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 568889999999999999998654 3456666543221110 0112223345667799999999987
Q ss_pred eecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc
Q 004232 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (766)
Q Consensus 548 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 627 (766)
+...... ....++++|++.. ++.+.+.... ..++.....++.|+++||+|||+. +|+||||||+|||++
T Consensus 92 ~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~ 160 (294)
T PHA02882 92 GSFKRCR----MYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVD 160 (294)
T ss_pred eeEecCC----ceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEc
Confidence 6654211 1235778887654 5555554321 246777889999999999999997 899999999999999
Q ss_pred CCCcEEEecCCCCcccccccc-----------cccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch
Q 004232 628 EHRIAKLSDYGLSIVSEDINS-----------VGGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL 692 (766)
Q Consensus 628 ~~~~~kl~DFGla~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~ 692 (766)
.++.+||+|||+|+....... ..++. ++......++.++|||||||++|||++|+.||.......
T Consensus 161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~ 240 (294)
T PHA02882 161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG 240 (294)
T ss_pred CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch
Confidence 999999999999865421110 00000 011112335668899999999999999999996442211
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
. ..... ..+...++..+...... ....+.+++..||..+|++||++.++.+.+
T Consensus 241 ~-~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 241 N-LIHAA-KCDFIKRLHEGKIKIKN---ANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred H-HHHHh-HHHHHHHhhhhhhccCC---CCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1 00000 00000111111100011 123477899999999999999999998865
No 356
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=2.4e-29 Score=264.99 Aligned_cols=250 Identities=19% Similarity=0.265 Sum_probs=178.1
Q ss_pred CCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|+..+.||+|+||.||+|+.. +++.||+|.+.... ....+.+..|+.++++++|||++++++++.+.+ .
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~--------~ 72 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER--------K 72 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC--------c
Confidence 455678999999999999965 59999999987643 233467788999999999999999999988753 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++|+||++ ++|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||+|+||++++++.+||+|||++.
T Consensus 73 ~~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 73 LYLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred eEEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 899999998 58999997642 2488999999999999999999997 89999999999999999999999999986
Q ss_pred ccccccccc--------cCCCCCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccC------c
Q 004232 642 VSEDINSVG--------GKQEDPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEG------R 705 (766)
Q Consensus 642 ~~~~~~~~~--------~~~~~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~------~ 705 (766)
......... ...++... ....+.++|||||||++||+++|+.|+...... ....+........ .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07829 147 AFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV 226 (282)
T ss_pred ccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence 543221100 01111111 114566899999999999999999888643211 0000000000000 0
Q ss_pred ccc--cc---ccccCCCCH----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRL--VD---PVVMATSSL----ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~--~d---~~~~~~~~~----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+ .+ +........ .....+.+++.+||+.+|++||++.+|+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000 00 000000000 01235789999999999999999999975
No 357
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=2.7e-29 Score=272.60 Aligned_cols=257 Identities=16% Similarity=0.259 Sum_probs=178.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC-----
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD----- 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~----- 556 (766)
.+|+..+.||+|+||.||+|+. .+|..||+|++........+.+.+|++++++++||||+++++++...+....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 5688889999999999999985 4689999999876655566778899999999999999999988765431100
Q ss_pred -cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CCCcEEE
Q 004232 557 -YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKL 634 (766)
Q Consensus 557 -~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl 634 (766)
......++||||++ ++|.+++... .+++.....++.|+++||+|||+. +|+||||||+||+++ +++.+|+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEE
Confidence 00125799999998 5898877532 378899999999999999999987 899999999999998 4567999
Q ss_pred ecCCCCccccccccc--------ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc
Q 004232 635 SDYGLSIVSEDINSV--------GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 635 ~DFGla~~~~~~~~~--------~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
+|||++......... +... ..|. .....+.++|||||||++|||++|+.||...... .........
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~--~~~~~~~~~ 234 (342)
T cd07854 157 GDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL--EQMQLILES 234 (342)
T ss_pred CCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence 999998654321110 0000 0111 1123456799999999999999999998643211 111100000
Q ss_pred c------Cccc--------cccccccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 E------GRQR--------LVDPVVMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 ~------~~~~--------~~d~~~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. ...+ ..........+. .....+.+++.+|++.||.+||++.||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0 0000 000000000000 011346789999999999999999999854
No 358
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=3.2e-29 Score=256.52 Aligned_cols=237 Identities=22% Similarity=0.313 Sum_probs=173.9
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhh---hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY---TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+.|++.+.||.|.-|+||.++.. ++...|+|++.+.... ...+.+.|.+||+.++||.+..||+.+..+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~------- 149 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD------- 149 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc-------
Confidence 34566789999999999999976 4689999999765432 345667788999999999999999999876
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
+..|+|||||+||+|....+++ +++.++......+|.+|..||+|||-. |||+|||||+||||-++|++-++||-
T Consensus 150 -~~~cl~meyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 150 -KYSCLVMEYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred -ceeEEEEecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeecc
Confidence 3789999999999999877755 456788888889999999999999987 99999999999999999999999999
Q ss_pred CCcccccccc--------------------c---------ccCC-C---------------CCC----------------
Q 004232 639 LSIVSEDINS--------------------V---------GGKQ-E---------------DPN---------------- 657 (766)
Q Consensus 639 la~~~~~~~~--------------------~---------~~~~-~---------------~~~---------------- 657 (766)
|+........ . ..+. . ++.
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 8743210000 0 0000 0 000
Q ss_pred ---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhcc
Q 004232 658 ---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCIC 734 (766)
Q Consensus 658 ---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~ 734 (766)
.....+.++|||+|||++|||+.|..||...+. .+.+..+..++ .++.+. .+-...+.+|+.+-+.
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~--~~Tl~NIv~~~--l~Fp~~-------~~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN--KETLRNIVGQP--LKFPEE-------PEVSSAAKDLIRKLLV 373 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc--hhhHHHHhcCC--CcCCCC-------CcchhHHHHHHHHHhc
Confidence 001112256999999999999999999964332 22222222211 111111 1223447899999999
Q ss_pred CCCCCCCC
Q 004232 735 SESWSRPS 742 (766)
Q Consensus 735 ~~p~~RPs 742 (766)
+||++|--
T Consensus 374 KdP~kRlg 381 (459)
T KOG0610|consen 374 KDPSKRLG 381 (459)
T ss_pred cChhhhhc
Confidence 99999965
No 359
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=6.5e-29 Score=269.70 Aligned_cols=257 Identities=18% Similarity=0.308 Sum_probs=179.9
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|++.+.||+|+||.||+|.. .+|..||||++.... ....+.+.+|++++++++||||+++++++.......
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~-- 90 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD-- 90 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc--
Confidence 456799999999999999999984 478999999985432 223456889999999999999999999887543111
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++||||+ +++|..++.. ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeec
Confidence 113569999999 6789887753 2478999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-ccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc-c--------
Q 004232 638 GLSIVSEDINSV-GGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS-Q-------- 702 (766)
Q Consensus 638 Gla~~~~~~~~~-~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~-~-------- 702 (766)
|++......... .... ..|. .....+.++|||||||++||+++|+.|+...... .....+.. .
T Consensus 163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 163 GLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--DQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred ccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHH
Confidence 998654322111 0000 0111 1123556789999999999999999998643211 11111000 0
Q ss_pred -----cCcccccc--ccccCC----CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 -----EGRQRLVD--PVVMAT----SSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 -----~~~~~~~d--~~~~~~----~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........ +..... ........+.+++.+|++.||++|||+.+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 000000 000111236789999999999999999999844
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=3.1e-29 Score=271.44 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=172.7
Q ss_pred cCCceecCCceeEEEEEe-cCCceEEEEEccCChhhh--------------HHHHHHHHHHHHhCCCCCcccccceeecC
Q 004232 487 MSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYT--------------VRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~--------------~~~~~~e~~~l~~l~Hpniv~l~g~~~~~ 551 (766)
+.+.||+|+||+||+|+. .+++.||||++....... ...+.+|++++++++||||+++++++...
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 357799999999999985 468999999886432211 12477899999999999999999998765
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
+ ..++||||++ |+|.+++... ..+++.....++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 93 ~--------~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~ 157 (335)
T PTZ00024 93 D--------FINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGI 157 (335)
T ss_pred C--------cEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCC
Confidence 3 6899999997 6899888643 2378889999999999999999987 8999999999999999999
Q ss_pred EEEecCCCCccccccc--------------cc-c-------cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 632 AKLSDYGLSIVSEDIN--------------SV-G-------GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~--------------~~-~-------~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
+|++|||++....... .. . ...++.. .....+.++|||||||++|||+||+.|+...
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999986543100 00 0 0001100 0112356789999999999999999998643
Q ss_pred ccch-HHHHhhhhcccCccccc-----------cccccCCC---CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 689 GQFL-QEELDSLNSQEGRQRLV-----------DPVVMATS---SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 689 ~~~~-~~~~~~~~~~~~~~~~~-----------d~~~~~~~---~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.... ...+...........+. .+...... .......+.+++.+|++.+|++||+++||+..
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 3211 11111111000000000 00000000 00112347789999999999999999999864
No 361
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.7e-29 Score=263.59 Aligned_cols=242 Identities=18% Similarity=0.304 Sum_probs=176.5
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEcc--CChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLP--SSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..|++.+.||+||...||++...+...+|+|++. ..+.+...-|..|+..|.+++ |.+||+|++|=..++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~------- 433 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG------- 433 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc-------
Confidence 3577889999999999999998888888988774 345566788999999999995 999999999866543
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
.+||||||-.- ||.++|++... ...+| .+..+..|+..++.++|++ +|||.||||.|.|+- +|.+||.|||+
T Consensus 434 -~lYmvmE~Gd~-DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGI 505 (677)
T KOG0596|consen 434 -YLYMVMECGDI-DLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGI 505 (677)
T ss_pred -eEEEEeecccc-cHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeech
Confidence 79999998665 89999987643 33456 6678899999999999998 999999999999985 57999999999
Q ss_pred Cccccccccc------ccCC--CCCCcc-------------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhh
Q 004232 640 SIVSEDINSV------GGKQ--EDPNSW-------------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDS 698 (766)
Q Consensus 640 a~~~~~~~~~------~~~~--~~~~~~-------------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~ 698 (766)
|.......+. .++. ..|.+. -....++||||+|||||+|+.|+.||.. ....+..
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~----~~n~~aK 581 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQ----IINQIAK 581 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHH----HHHHHHH
Confidence 9654322111 0110 011100 0123478999999999999999999852 1111222
Q ss_pred hhc-ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 699 LNS-QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 699 ~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.. .+.-.++.-|.+. ... .++++++.|++.||.+||+..|+++.
T Consensus 582 l~aI~~P~~~Iefp~~~---~~~---~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 582 LHAITDPNHEIEFPDIP---END---ELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHhhcCCCccccccCCC---Cch---HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 111 1111222222221 111 17899999999999999999999864
No 362
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-30 Score=297.14 Aligned_cols=240 Identities=18% Similarity=0.297 Sum_probs=175.7
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
-++.-...||.|.||.||-|. .++|+..|+|.++-. .......+.+|+.++..++|||+|+++|+=.+.+
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe------- 1307 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE------- 1307 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-------
Confidence 345567789999999999997 678999999988643 3344567889999999999999999999876653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..+|.||||++|+|.+.+...+ ..+......+..|++.|++|||++ +||||||||+||+||.+|.+|.+|||.
T Consensus 1308 -kv~IFMEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1308 -KVYIFMEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred -HHHHHHHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccc
Confidence 6899999999999999886532 355666667888999999999998 999999999999999999999999999
Q ss_pred Cccccccc-ccc----cCCCCCCcccC----------CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 640 SIVSEDIN-SVG----GKQEDPNSWEM----------TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 640 a~~~~~~~-~~~----~~~~~~~~~~~----------~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
|....... ... ...++|.+..+ ..-++||||+|||+.||+||++|+..-+..+.-.+ .+..+.
T Consensus 1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy--~V~~gh 1458 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY--HVAAGH 1458 (1509)
T ss_pred eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh--HHhccC
Confidence 96543321 110 11112222111 11246999999999999999999974332221111 111122
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDIL 747 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~ 747 (766)
..+++.. --.+-.+++.+|++.||++|.++.|++
T Consensus 1459 ~Pq~P~~---------ls~~g~dFle~Cl~~dP~~Rw~~~qll 1492 (1509)
T KOG4645|consen 1459 KPQIPER---------LSSEGRDFLEHCLEQDPKMRWTASQLL 1492 (1509)
T ss_pred CCCCchh---------hhHhHHHHHHHHHhcCchhhhHHHHHH
Confidence 2222211 223356889999999999998777554
No 363
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=5.2e-29 Score=282.94 Aligned_cols=257 Identities=16% Similarity=0.176 Sum_probs=165.9
Q ss_pred HhcCCCcCCceecCCceeEEEEEecC--CceEEEEEcc-----------------CChhhhHHHHHHHHHHHHhCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLEN--GTSVAIRCLP-----------------SSKKYTVRNLKLRLDLLAKLRHPHL 541 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~--g~~vAvK~l~-----------------~~~~~~~~~~~~e~~~l~~l~Hpni 541 (766)
..++|++.+.||+|+||+||++..+. +..+++|.+. .......+.+++|+.+|++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987532 2222222110 0111234568899999999999999
Q ss_pred ccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 004232 542 VCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP--GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV 619 (766)
Q Consensus 542 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl 619 (766)
|++++++.+.+ ..++|+|++.. ++..++..... ...........++.|++.||+|||+. +|+||||
T Consensus 226 v~l~~~~~~~~--------~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDL 293 (501)
T PHA03210 226 LKIEEILRSEA--------NTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDI 293 (501)
T ss_pred CcEeEEEEECC--------eeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 99999998764 67999999864 67666643211 11123455668999999999999997 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCcccccccc------ccc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCc-cccCc
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVSEDINS------VGG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSV-AARKG 689 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~~~~~~------~~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p-~~~~~ 689 (766)
||+|||++.++.+||+|||+++....... .+. ..++......++.++|||||||++|||++|..+ +....
T Consensus 294 KP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~ 373 (501)
T PHA03210 294 KLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG 373 (501)
T ss_pred CHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC
Confidence 99999999999999999999975432211 011 111111223456688999999999999998754 33222
Q ss_pred cchHHHHhhhhcc-c-Cccccccc-----------cccCC--CCHH------HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 690 QFLQEELDSLNSQ-E-GRQRLVDP-----------VVMAT--SSLE------SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 690 ~~~~~~~~~~~~~-~-~~~~~~d~-----------~~~~~--~~~~------~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
......+..+... . ...++.++ ..... .... ....+.+++.+|++.||.+|||+.|++.
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 374 GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1111111111000 0 00011110 00000 0000 0123567788999999999999999986
Q ss_pred H
Q 004232 749 N 749 (766)
Q Consensus 749 ~ 749 (766)
.
T Consensus 454 h 454 (501)
T PHA03210 454 L 454 (501)
T ss_pred C
Confidence 4
No 364
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=4.9e-29 Score=270.76 Aligned_cols=257 Identities=18% Similarity=0.309 Sum_probs=180.5
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|+..+.||+|+||.||+|+.. ++..||||++... .....+.+.+|+.++++++||||+++++++...+.. .
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~ 90 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL--E 90 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc--c
Confidence 3567888999999999999999864 6889999998643 223346677899999999999999999977654310 0
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++|+||+ +++|.+++.. ..+++.....++.++++|++|||+. +|+||||||+||++++++.+||+||
T Consensus 91 ~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 91 DFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEccc
Confidence 112489999998 5699888864 2488999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc-cCCC--CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-c-Cc----
Q 004232 638 GLSIVSEDINSVG-GKQE--DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-E-GR---- 705 (766)
Q Consensus 638 Gla~~~~~~~~~~-~~~~--~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~-~~---- 705 (766)
|++.......... .... .|. .....+.++|||||||++||++||+.|+..... ...+..+... + ..
T Consensus 163 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 163 GLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred cccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHH
Confidence 9986543221110 0100 111 112456789999999999999999999864322 1111111000 0 00
Q ss_pred --------ccccccc-ccCCCC-----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 --------QRLVDPV-VMATSS-----LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 --------~~~~d~~-~~~~~~-----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.... ...... ......+.+++.+|++.+|++|||+.||++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0000000 000000 0012357899999999999999999999764
No 365
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=2e-28 Score=253.23 Aligned_cols=228 Identities=21% Similarity=0.267 Sum_probs=171.7
Q ss_pred eecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 491 MGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
||+|+||.||++... +++.+|+|.+..... .....+..|++++++++||||+++++.+.... ..++||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~~~v~ 72 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE--------KLYLVL 72 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC--------eeEEEE
Confidence 699999999999865 589999999865432 24567889999999999999999999887653 689999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDI 646 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~ 646 (766)
||+++++|.+++.... .+++.....++.+++.|+.|+|+. +++|+||||+||+++.++.+||+|||++......
T Consensus 73 e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 73 EYAPGGELFSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred ecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999999987543 478999999999999999999996 8999999999999999999999999998654322
Q ss_pred c-cc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCC
Q 004232 647 N-SV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSS 718 (766)
Q Consensus 647 ~-~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 718 (766)
. .. ....++.......+.++||||||+++||+++|+.|+..... ......+.. . ...-+ ...
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~-~---~~~~~---~~~- 216 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILK-D---PLRFP---EFL- 216 (250)
T ss_pred CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc-C---CCCCC---CCC-
Confidence 1 00 01111111112345679999999999999999999864332 111222211 0 00001 111
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHH
Q 004232 719 LESLSIVISIANKCICSESWSRPSFED 745 (766)
Q Consensus 719 ~~~~~~~~~l~~~C~~~~p~~RPs~~e 745 (766)
...+.+++.+||..||++||++.+
T Consensus 217 ---~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 217 ---SPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ---CHHHHHHHHHHhcCCHhhCCCccc
Confidence 123678999999999999999954
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.96 E-value=1.5e-28 Score=265.66 Aligned_cols=254 Identities=20% Similarity=0.302 Sum_probs=174.3
Q ss_pred CCCcCCceecCCceeEEEEEec-C--CceEEEEEccCC--hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE-N--GTSVAIRCLPSS--KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~-~--g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+|++.+.||+|+||.||+++.. . +..||||++... .....+.+.+|+++++++ +||||+++++++.....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~---- 76 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPG---- 76 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccc----
Confidence 3677889999999999999864 3 788999998643 222356678899999999 59999999987654311
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.....++++||+. ++|.+++... ..+++.....++.|++.||+|||+. +++||||||+||++++++.+||+||
T Consensus 77 ~~~~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 77 NFNELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cCCcEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 1135789999987 5898888643 3488999999999999999999987 8999999999999999999999999
Q ss_pred CCCcccccccc---------cccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HH---------
Q 004232 638 GLSIVSEDINS---------VGGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QE--------- 694 (766)
Q Consensus 638 Gla~~~~~~~~---------~~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~--------- 694 (766)
|+++....... .+... ..|.. ....+.++|||||||++|||++|+.|+....... ..
T Consensus 150 g~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (332)
T cd07857 150 GLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTP 229 (332)
T ss_pred CCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCC
Confidence 99865432110 00000 01111 1234567899999999999999999886432110 00
Q ss_pred ---HHhhhhcccC------ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 695 ---ELDSLNSQEG------RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 695 ---~~~~~~~~~~------~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+..+..... ............ .......+.+++.+|++.||.+||++.|++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 230 DEETLSRIGSPKAQNYIRSLPNIPKKPFESI-FPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CHHHHHhhhhhhHHHHHHhccccCCcchHhh-CCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 000000000000 00012347789999999999999999998754
No 367
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=243.92 Aligned_cols=242 Identities=23% Similarity=0.329 Sum_probs=170.8
Q ss_pred CcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcceE
Q 004232 486 DMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+....||.|.-|.|++++++ +|..+|||.+... .++..+++.+.++++.+-+ .|.||+.+|||.... .+
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~--------dV 166 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT--------DV 166 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc--------hH
Confidence 34567999999999999965 6899999999754 4555677888888776654 899999999998753 46
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++.||.|.- -+..+++.-. .+++....-++...+.+||.||-+.+ +|+|||+||+|||+|+.|++|+||||++..
T Consensus 167 ~IcMelMs~-C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 167 FICMELMST-CAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGR 241 (391)
T ss_pred HHHHHHHHH-HHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccce
Confidence 788888764 3444444322 23555555678888999999999875 899999999999999999999999999955
Q ss_pred ccccc----ccccCC-CCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDIN----SVGGKQ-EDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~----~~~~~~-~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
..+.. +.++.. ..|. ....+...+|||||||.++|++||+.||...... .+.+..+...+ ...+++.
T Consensus 242 lvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td-Fe~ltkvln~e--PP~L~~~ 318 (391)
T KOG0983|consen 242 LVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD-FEVLTKVLNEE--PPLLPGH 318 (391)
T ss_pred eecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-HHHHHHHHhcC--CCCCCcc
Confidence 43221 111111 1111 1233456789999999999999999999743222 22233333221 1112211
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........++...|+..|+.+||...++++.
T Consensus 319 ------~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 319 ------MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ------cCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 1123347788999999999999999888754
No 368
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=4.3e-29 Score=284.33 Aligned_cols=254 Identities=19% Similarity=0.319 Sum_probs=175.5
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCC---
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG--- 553 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~--- 553 (766)
.+...+|+..+.||+||||.|||++-+ ||..+|||++.-. .......+.+|+.++++++|||||+++..+.+...
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 466788999999999999999999844 8999999999754 33445678899999999999999999876532110
Q ss_pred --------------------------------------------------------------------------------
Q 004232 554 -------------------------------------------------------------------------------- 553 (766)
Q Consensus 554 -------------------------------------------------------------------------------- 553 (766)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred -------------------CCCcCc---------ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 004232 554 -------------------RDDYAV---------NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQF 605 (766)
Q Consensus 554 -------------------~~~~~~---------~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~y 605 (766)
.++... ..+|+-||||+.-.++++++.+.... .-...++++.+|++||+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHH
Confidence 000000 24789999999999998887654221 345567899999999999
Q ss_pred HhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc----c--------c-----cc------cccC----CCCCCc
Q 004232 606 LHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE----D--------I-----NS------VGGK----QEDPNS 658 (766)
Q Consensus 606 LH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~----~--------~-----~~------~~~~----~~~~~~ 658 (766)
+|+. +||||||||.||++|++..+||+|||+|.... . . .. .++. ++....
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9998 89999999999999999999999999996511 0 0 00 0000 010111
Q ss_pred cc--CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCC
Q 004232 659 WE--MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSE 736 (766)
Q Consensus 659 ~~--~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~ 736 (766)
+. .++.|+|+||+|||++||+. ||... +.=...+..+. .+ .+..+. .........-.+++.+.++.|
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-MERa~iL~~LR-~g---~iP~~~---~f~~~~~~~e~slI~~Ll~hd 858 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-MERASILTNLR-KG---SIPEPA---DFFDPEHPEEASLIRWLLSHD 858 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCch-HHHHHHHHhcc-cC---CCCCCc---ccccccchHHHHHHHHHhcCC
Confidence 22 57789999999999999996 45421 11111122221 11 111110 001111222357888999999
Q ss_pred CCCCCCHHHHHH
Q 004232 737 SWSRPSFEDILW 748 (766)
Q Consensus 737 p~~RPs~~ev~~ 748 (766)
|.+|||+.|++.
T Consensus 859 P~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 859 PSKRPTATELLN 870 (1351)
T ss_pred CccCCCHHHHhh
Confidence 999999999875
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=1.6e-30 Score=250.79 Aligned_cols=243 Identities=19% Similarity=0.301 Sum_probs=170.2
Q ss_pred CCceecCCceeEEEEEe-cCCceEEEEEccCChh-hhHHHHHHHHHH-HHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK-YTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~e~~~-l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
...||.|+||+|+|-.. +.|+..|||++..... .+.+++..|.+. |+.-+.||||+++|++..++ ..|+
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG--------dcWi 140 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG--------DCWI 140 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--------ceee
Confidence 46799999999999875 5799999999976533 456778888775 55568999999999998765 5799
Q ss_pred EEEccCCCChhhh---hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 565 VYEFMSNGNFRTH---ISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 565 v~Ey~~~GsL~~~---l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.||.|.- +++.+ +.... ...++....-.|......||.||-... .|||||+||+|||+|..|.+|+||||++.
T Consensus 141 CMELMd~-SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 141 CMELMDI-SLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred eHHHHhh-hHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchH
Confidence 9999974 55433 22211 123566666677778889999998763 79999999999999999999999999985
Q ss_pred ccccc----cccccCCC-CCCc----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 642 VSEDI----NSVGGKQE-DPNS----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 642 ~~~~~----~~~~~~~~-~~~~----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
...+. ...++.+. .|.. ...+..++||||+|++|||+.||+.|+..... ..+.+..+.. -||.
T Consensus 217 qLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-vfeql~~Vv~-------gdpp 288 (361)
T KOG1006|consen 217 QLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-VFEQLCQVVI-------GDPP 288 (361)
T ss_pred hHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-HHHHHHHHHc-------CCCC
Confidence 43221 11222221 1111 12366789999999999999999999864322 1121222221 1222
Q ss_pred ccCCCC--HHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 713 VMATSS--LESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 713 ~~~~~~--~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
+..... .+-...+.+++..|+-+|-++||+..++.+.=
T Consensus 289 ~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~ 328 (361)
T KOG1006|consen 289 ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFP 328 (361)
T ss_pred eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCc
Confidence 211111 11223478889999999999999999987763
No 370
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=258.73 Aligned_cols=238 Identities=20% Similarity=0.295 Sum_probs=176.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.+.|..-++||+||||.||-++.. +|+.+|.|++.+.. +........|-.+|.+++.|.||.+--++...
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk------ 257 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK------ 257 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC------
Confidence 467888999999999999999854 79999999886532 22334566788999999999999987666654
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
+.+++|+..|.||||..||.+.+. ..++..+.+.+|.+|+.||++||.. .||.||+||+|||||++|+++|+|.
T Consensus 258 --d~LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDL 331 (591)
T KOG0986|consen 258 --DALCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDL 331 (591)
T ss_pred --CceEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeecc
Confidence 379999999999999999987653 4588888999999999999999998 8999999999999999999999999
Q ss_pred CCCccccccccccc-------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVGG-------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~~-------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (766)
|+|....+.....+ ..++....+.++...|+||+||++|||+.|..||...... ..++++.....+ ..++
T Consensus 332 GLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~-~~ey- 409 (591)
T KOG0986|consen 332 GLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED-PEEY- 409 (591)
T ss_pred ceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc-hhhc-
Confidence 99965544322221 1122222345777899999999999999999999743221 122233322211 1111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCC
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRP 741 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP 741 (766)
++....++.+|...-++.||.+|-
T Consensus 410 --------~~kFS~eakslc~~LL~Kdp~~RL 433 (591)
T KOG0986|consen 410 --------SDKFSEEAKSLCEGLLTKDPEKRL 433 (591)
T ss_pred --------ccccCHHHHHHHHHHHccCHHHhc
Confidence 111122345666677888888884
No 371
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.6e-28 Score=269.72 Aligned_cols=256 Identities=15% Similarity=0.198 Sum_probs=166.9
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-----------------cCCceEEEEEccCChhhhHHH--------------HHHH
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-----------------ENGTSVAIRCLPSSKKYTVRN--------------LKLR 529 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-----------------~~g~~vAvK~l~~~~~~~~~~--------------~~~e 529 (766)
..++|++.++||+|+||+||+|.. ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 235689999987543322223 3346
Q ss_pred HHHHHhCCCCCc-----ccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC---------------------
Q 004232 530 LDLLAKLRHPHL-----VCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP--------------------- 583 (766)
Q Consensus 530 ~~~l~~l~Hpni-----v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~--------------------- 583 (766)
+.++.+++|.++ ++++|||..............+|||||+++|+|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 677778877654 778888875321111222468999999999999998864210
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccccccc----cc-----cCCC
Q 004232 584 GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINS----VG-----GKQE 654 (766)
Q Consensus 584 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~----~~-----~~~~ 654 (766)
...++|..+..++.+++.||+|+|+. +|+||||||+||+++.++.+||+|||++........ .+ +..+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 12356788889999999999999987 899999999999999999999999999854321110 00 0001
Q ss_pred CCCcc---------------------c-CCCCCCCEeehhHHHHHHhcCCC-ccccCccchH---------HHHhhhhcc
Q 004232 655 DPNSW---------------------E-MTKLEDDVFSFGFMLLESVAGPS-VAARKGQFLQ---------EELDSLNSQ 702 (766)
Q Consensus 655 ~~~~~---------------------~-~~~~~~DV~SfGvil~ElltG~~-p~~~~~~~~~---------~~~~~~~~~ 702 (766)
+.... . ....+.||||+||+++||++|.. |+.....+.. ..|......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~ 459 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ 459 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence 10000 0 01124699999999999999864 5532111100 001111000
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCC---CCCCCHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSES---WSRPSFEDILW 748 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p---~~RPs~~ev~~ 748 (766)
...+ ...... -....+++.+++..+| .+|+|++|+++
T Consensus 460 --~~~~---~~~d~~----s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 460 --KYDF---SLLDRN----KEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred --CCCc---cccccc----ChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0010 001111 1236788889998766 68999999875
No 372
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=7.7e-28 Score=281.77 Aligned_cols=145 Identities=26% Similarity=0.454 Sum_probs=127.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.+++.++||||+++++++....
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~------ 77 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN------ 77 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC------
Confidence 57888999999999999999965 68999999986542 233567889999999999999999998887653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+|+||||+++|+|.+++.... .+++.....++.+|+.||+|||.. +|+||||||+|||++.++.+||+|||
T Consensus 78 --~~~lVmEy~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 78 --NVYLVMEYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred --EEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 7899999999999999987543 378888899999999999999997 89999999999999999999999999
Q ss_pred CCc
Q 004232 639 LSI 641 (766)
Q Consensus 639 la~ 641 (766)
+++
T Consensus 150 ls~ 152 (669)
T cd05610 150 LSK 152 (669)
T ss_pred CCc
Confidence 975
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.95 E-value=7.6e-28 Score=247.18 Aligned_cols=217 Identities=18% Similarity=0.142 Sum_probs=158.7
Q ss_pred CCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCC
Q 004232 494 GSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNG 572 (766)
Q Consensus 494 G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~G 572 (766)
|.||.||+++. .+++.+|+|++.... .+.+|...+....||||+++++++.+.+ ..++||||+++|
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~--------~~~lv~e~~~~~ 70 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED--------SVFLVLQHAEGG 70 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC--------eEEEEEecCCCC
Confidence 89999999985 478999999986543 2334455555667999999999887653 689999999999
Q ss_pred ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccc---
Q 004232 573 NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV--- 649 (766)
Q Consensus 573 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~--- 649 (766)
+|.+++.+.. .+++.....++.++++||+|||+. +|+||||||+||+++.++.+|++|||.+.........
T Consensus 71 ~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 144 (237)
T cd05576 71 KLWSHISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAV 144 (237)
T ss_pred CHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCc
Confidence 9999987543 388999999999999999999986 8999999999999999999999999987543321111
Q ss_pred --ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHH
Q 004232 650 --GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVIS 727 (766)
Q Consensus 650 --~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 727 (766)
....++.......+.++||||+||++|||++|+.|+...... .. ....+.-| ... ...+.+
T Consensus 145 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-------~~---~~~~~~~~---~~~----~~~~~~ 207 (237)
T cd05576 145 ENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-------IN---THTTLNIP---EWV----SEEARS 207 (237)
T ss_pred CccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-------cc---cccccCCc---ccC----CHHHHH
Confidence 011111112234566899999999999999998776422110 00 00000001 011 123678
Q ss_pred HHHHhccCCCCCCCCHHHH
Q 004232 728 IANKCICSESWSRPSFEDI 746 (766)
Q Consensus 728 l~~~C~~~~p~~RPs~~ev 746 (766)
++.+|++.||++||++.+.
T Consensus 208 li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 208 LLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHccCCHHHhcCCCcc
Confidence 8999999999999997443
No 374
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=8.5e-28 Score=218.88 Aligned_cols=189 Identities=21% Similarity=0.288 Sum_probs=146.0
Q ss_pred CCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+|+..+.||+|.||+||||+ +++++.||+|++.-.+ ..-.....+|+.+++.++|+|||+++++.-.+ +
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd--------k 74 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD--------K 74 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC--------c
Confidence 35556789999999999998 6679999999886432 22245678899999999999999999876554 4
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
.+.+|+|||.. +|..+...-.. .++......++.|+.+||.|+|++ .++|||+||.|.||+.+|+.|++|||++
T Consensus 75 kltlvfe~cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 75 KLTLVFEFCDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred eeEEeHHHhhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 78999999987 78877765432 378888889999999999999998 7899999999999999999999999999
Q ss_pred cccccccccc--------cCCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCc-cc
Q 004232 641 IVSEDINSVG--------GKQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSV-AA 686 (766)
Q Consensus 641 ~~~~~~~~~~--------~~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p-~~ 686 (766)
+...-..... +.++... ...-++...|+||-|||+.|+.....| |+
T Consensus 149 rafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred hhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 7643221111 1111111 112345667999999999999975444 54
No 375
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-28 Score=238.76 Aligned_cols=249 Identities=21% Similarity=0.314 Sum_probs=185.4
Q ss_pred CHHHHHHHhcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 474 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
+++++-+-| .++||+|+|+.|--+. ..+|..+|||++.+.....+.++.+|++++... .|+||++|+.||.++
T Consensus 74 ~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 356665555 3689999999999987 678999999999888777888999999999998 499999999999986
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR- 630 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~- 630 (766)
. .+|||||-|.+|.|..+|+++. .++..+..+++.+||.||.|||.. +|.||||||+|||-....
T Consensus 149 ~--------~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 149 T--------RFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNK 214 (463)
T ss_pred c--------eEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCC
Confidence 4 7999999999999999998764 478888899999999999999997 999999999999986433
Q ss_pred --cEEEecCCCCcccccccc--cccCCC-----CCCcc-------------cCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 631 --IAKLSDYGLSIVSEDINS--VGGKQE-----DPNSW-------------EMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 631 --~~kl~DFGla~~~~~~~~--~~~~~~-----~~~~~-------------~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
-+|||||-+..-...... ...+++ ....+ ..+..+.|.||+|||+|-|++|.+||...
T Consensus 215 vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 215 VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 489999988632211111 111110 00011 23445789999999999999999998642
Q ss_pred cc----ch--------HHH-HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 689 GQ----FL--------QEE-LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 689 ~~----~~--------~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. +. +.. +.+ .++...+++|..+... ..+..+++..-+..||.+|-++.+|+.
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFes--IQEGkYeFPdkdWahI-----S~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFES--IQEGKYEFPDKDWAHI-----SSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHH--HhccCCcCChhhhHHh-----hHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11 10 111 111 1344566666554322 123567777788899999999988876
No 376
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.3e-28 Score=274.10 Aligned_cols=208 Identities=21% Similarity=0.291 Sum_probs=164.8
Q ss_pred HHHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccC---ChhhhHHHHHHHHHHHHhCCCCCcccccceeecC
Q 004232 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPS---SKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~---~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~ 551 (766)
.+++-..++|++.++||+|+||.|..++.+ +++.+|.|++++ .+......|..|-++|.-.+.+-||++.-+|.++
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344445688999999999999999999864 688999999976 3445567899999999999999999999888876
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
. .+|+|||||+||||-.++.+.. .++..-...++..|..||.-+|+. |+|||||||.|||||..|+
T Consensus 148 ~--------~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 148 R--------YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred c--------ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCc
Confidence 3 7999999999999999997654 366666677888999999999997 9999999999999999999
Q ss_pred EEEecCCCCcccccccccc--cCCCCCC------------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHh
Q 004232 632 AKLSDYGLSIVSEDINSVG--GKQEDPN------------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELD 697 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~--~~~~~~~------------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~ 697 (766)
+|++|||-+......+.+. .+-++|. ....++.++|+||+||++|||+.|..||. .+.+.+.+.
T Consensus 214 ikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY--adslveTY~ 291 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY--ADSLVETYG 291 (1317)
T ss_pred EeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch--HHHHHHHHH
Confidence 9999999875443222211 1111111 12456778999999999999999999986 333444444
Q ss_pred hh
Q 004232 698 SL 699 (766)
Q Consensus 698 ~~ 699 (766)
.+
T Consensus 292 KI 293 (1317)
T KOG0612|consen 292 KI 293 (1317)
T ss_pred HH
Confidence 43
No 377
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=5.1e-28 Score=238.24 Aligned_cols=193 Identities=21% Similarity=0.304 Sum_probs=149.5
Q ss_pred cCCCcCCceecCCceeEEEEEec---C--CceEEEEEccCChhhh--HHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE---N--GTSVAIRCLPSSKKYT--VRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~---~--g~~vAvK~l~~~~~~~--~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
..|+....||+|.||.||||... + ...+|+|+++..+... .....||+.++++++|||+|.|..++...+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d--- 100 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD--- 100 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC---
Confidence 45888899999999999999632 2 2378999998764322 356789999999999999999999888743
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC----
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENT--PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---- 629 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---- 629 (766)
..++|++||.+. ||.+.++-+. ..+.++-.....|..||..|+.|||++ =|+||||||+|||+..+
T Consensus 101 ----~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 101 ----KKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred ----ceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 379999999998 8888775432 335677778889999999999999998 57999999999999866
Q ss_pred CcEEEecCCCCcccccccccc-----------cCC-CCCCcccCCCCCCCEeehhHHHHHHhcCCCccc
Q 004232 630 RIAKLSDYGLSIVSEDINSVG-----------GKQ-EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~~-----------~~~-~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~ 686 (766)
|.+||+|+|+++...+.-..- +.. +......-++.+.||||.|||..||+|-++-|.
T Consensus 173 G~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred CeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 899999999997654321110 011 111112346677899999999999999876654
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.95 E-value=7.6e-28 Score=236.09 Aligned_cols=248 Identities=17% Similarity=0.284 Sum_probs=179.1
Q ss_pred HhcCCCcC-CceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMS-AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.|++|.+. .+||-|--|+|..+.. .+++.+|+|.+.... ..++|+++.=.. .|||||+.+++|...-.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~---- 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQ---- 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhcc----
Confidence 45667664 5789999999999874 579999999886543 345677765444 69999999998864311
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEEE
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKL 634 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl 634 (766)
....+.+|||+|+||+|+.-+++++. ..++..+.-.|+.+|+.|++|||+. .|.||||||+|+|-.. +-..|+
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 12468999999999999999987653 4588888999999999999999998 7999999999999874 457999
Q ss_pred ecCCCCcccccccccccCCCCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCcc
Q 004232 635 SDYGLSIVSEDINSVGGKQEDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQ 706 (766)
Q Consensus 635 ~DFGla~~~~~~~~~~~~~~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~ 706 (766)
+|||+|+.........+....|.+ .+.+....|+||+||++|-|+.|.+||-..... ...-... .......
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~-rI~~gqy 284 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKR-RIRTGQY 284 (400)
T ss_pred cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHh-HhhccCc
Confidence 999999876543322221112211 133455679999999999999999998643221 1111111 1112344
Q ss_pred ccccccccCCCCHHHH-HHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 707 RLVDPVVMATSSLESL-SIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~-~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
++.+|.+ .++ +...+++...+..+|++|-|..|++.
T Consensus 285 ~FP~pEW------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 285 EFPEPEW------SCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred cCCChhH------hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 5555543 232 33677888889999999999999975
No 379
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.8e-28 Score=259.79 Aligned_cols=234 Identities=18% Similarity=0.203 Sum_probs=173.6
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+++|++...+|.|+|+.|.++.. .+++..|||.+.... .+-.+|+.++... +||||+++.+.|.+..
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~------- 389 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGK------- 389 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCc-------
Confidence 56788888899999999999984 568889999997652 2334566555555 7999999999998763
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE-cCCCcEEEecCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL-NEHRIAKLSDYG 638 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-d~~~~~kl~DFG 638 (766)
..|+|||++.+|-+.+.+.... ..-..+..++.+++.|+.|||+. +||||||||+|||+ ++.+++||+|||
T Consensus 390 -~~~~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG 461 (612)
T KOG0603|consen 390 -EIYLVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFG 461 (612)
T ss_pred -eeeeeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEec
Confidence 7899999999999888776543 22256777999999999999996 99999999999999 588999999999
Q ss_pred CCccccccc-----ccccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 639 LSIVSEDIN-----SVGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 639 la~~~~~~~-----~~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
.++...... +..+..++......++.++||||+||+||||++|+.|+...... .+....+.. +...
T Consensus 462 ~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~~-~~~s------- 532 (612)
T KOG0603|consen 462 FWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQM-PKFS------- 532 (612)
T ss_pred hhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhcC-Cccc-------
Confidence 997654331 11111222222345677899999999999999999998754433 222222111 1000
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..-...+.+|+.+|++.||.+||+|+|+..
T Consensus 533 -----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 -----ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -----cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 111123678999999999999999999864
No 380
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-27 Score=261.88 Aligned_cols=256 Identities=22% Similarity=0.386 Sum_probs=191.4
Q ss_pred HHHHHHHhcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 475 LEELKEATNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 475 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
++.+...++-|++.++||.|.+|.||+++ .++|+.+|||++..... ..++.+.|.++++.. .|||++.++|++....
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 44455567789999999999999999998 56789999998865433 236677888888887 6999999999887543
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcE
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
. ...+++|||||||.+|+..++++... +..+.|.....|.+++.+|+++||.+ .++|||+|-.|||++.++.+
T Consensus 90 ~---~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 90 P---GNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred C---CCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcE
Confidence 1 22358999999999999999987655 55689999999999999999999998 78999999999999999999
Q ss_pred EEecCCCCcccccccccccCCCCCCcccC-------------CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhh
Q 004232 633 KLSDYGLSIVSEDINSVGGKQEDPNSWEM-------------TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSL 699 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~~~~~~~~~~~~-------------~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~ 699 (766)
|+.|||++...+.+.....+.-...+|+. ++..+||||+|++-.||.-|.+|...... ...+-.
T Consensus 163 KLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP--mraLF~- 239 (953)
T KOG0587|consen 163 KLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP--MRALFL- 239 (953)
T ss_pred EEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch--hhhhcc-
Confidence 99999999766543322222222223333 23467999999999999999999753211 111111
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+.+-+.|.+.. +..-..++.+++..|+..|-.+||++.+.++
T Consensus 240 -----IpRNPPPkLkr--p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 240 -----IPRNPPPKLKR--PKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -----CCCCCCccccc--hhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 11112222221 1223455789999999999999999988764
No 381
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.9e-28 Score=237.78 Aligned_cols=234 Identities=21% Similarity=0.261 Sum_probs=170.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
..++|+..++||+|.||+|..++- .+|+.+|+|++++.. +........|-++|+..+||.+..|.-.+...
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~----- 240 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ----- 240 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC-----
Confidence 357889999999999999999984 579999999998753 34455667788999999999999886555543
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
+.+|+||||+.+|.|..+|.+. +.++......+-..|..||.|||++ +||.||||.+|.|+|.+|++||+|
T Consensus 241 ---drlCFVMeyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitD 311 (516)
T KOG0690|consen 241 ---DRLCFVMEYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITD 311 (516)
T ss_pred ---ceEEEEEEEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeee
Confidence 4799999999999999999754 3466666677888899999999997 899999999999999999999999
Q ss_pred CCCCcccccccc-cccCCCCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINS-VGGKQEDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~-~~~~~~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||+.+.--.... ..+..+.|.+. .-+....|+|..||+||||+.|+-||........-+ +.. ..++
T Consensus 312 FGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFe---LIl---~ed~ 385 (516)
T KOG0690|consen 312 FGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFE---LIL---MEDL 385 (516)
T ss_pred cccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHH---HHH---hhhc
Confidence 999864221111 11111122222 123456899999999999999999987543321111 111 1122
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCC
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRP 741 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP 741 (766)
.-|.-. +. ++..|..-.+..||.+|-
T Consensus 386 kFPr~l---s~----eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 386 KFPRTL---SP----EAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred cCCccC---CH----HHHHHHHHHhhcChHhhc
Confidence 222211 11 244566777889999994
No 382
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-27 Score=244.91 Aligned_cols=243 Identities=18% Similarity=0.284 Sum_probs=173.3
Q ss_pred CCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh-------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 485 FDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK-------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~-------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
|-+.+.||+|||..||||. +...+.||||+-...+ ....+...+|-.|.+.++||.||++|+|+.-+.
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDt---- 540 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDT---- 540 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecc----
Confidence 4456789999999999997 4557789999754321 223456778999999999999999999987543
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAK 633 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~k 633 (766)
+.+|-|+|||++.+|+-||..+. .++..+...|+.||+.||.||.... |+|||=||||.||||-+ .|.+|
T Consensus 541 ---dsFCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 541 ---DSFCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred ---ccceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeE
Confidence 36899999999999999998764 3788899999999999999999854 68999999999999953 47899
Q ss_pred EecCCCCcccccccccc---------cCC---CCC-Cc------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHH
Q 004232 634 LSDYGLSIVSEDINSVG---------GKQ---EDP-NS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQE 694 (766)
Q Consensus 634 l~DFGla~~~~~~~~~~---------~~~---~~~-~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~ 694 (766)
|+|||+++..++..... +.+ ..| .. ....+.|+||||.|||+|..+.|+.||..... .++
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-QQd 692 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-QQD 692 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-HHH
Confidence 99999998875432110 011 001 10 11234689999999999999999999974321 111
Q ss_pred HHh--hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 004232 695 ELD--SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDIL 747 (766)
Q Consensus 695 ~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~ 747 (766)
.+. .+.. ..++--|.- +..+ .++..++.+|+++.-.+|-...|+.
T Consensus 693 ILqeNTIlk---AtEVqFP~K-PvVs----seAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 693 ILQENTILK---ATEVQFPPK-PVVS----SEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred HHhhhchhc---ceeccCCCC-CccC----HHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 111 1111 111111110 1111 2356788999999888887666554
No 383
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=1.1e-26 Score=238.11 Aligned_cols=231 Identities=24% Similarity=0.325 Sum_probs=172.6
Q ss_pred CceeEEEEEec-CCceEEEEEccCChhhh-HHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCC
Q 004232 495 SYGKLYKGRLE-NGTSVAIRCLPSSKKYT-VRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNG 572 (766)
Q Consensus 495 ~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~G 572 (766)
+||.||+|+.. +|+.+|+|++....... .+.+.+|++.+++++|+|+++++|++.... ..++++||++++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--------~~~l~~e~~~~~ 72 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED--------KLYLVMEYCDGG 72 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC--------EEEEEEeCCCCC
Confidence 58999999976 58999999997654433 678999999999999999999999988753 689999999999
Q ss_pred ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccc---
Q 004232 573 NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV--- 649 (766)
Q Consensus 573 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~--- 649 (766)
+|..++..... +++..+..++.+++.+++|||+. +++|+||+|+||++++++.++++|||.+.........
T Consensus 73 ~L~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 73 DLFDLLKKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred CHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccc
Confidence 99999875432 78899999999999999999997 8999999999999999999999999998655432110
Q ss_pred -c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHH
Q 004232 650 -G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIV 725 (766)
Q Consensus 650 -~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 725 (766)
+ ...++.......+.++||||||+++||+++|..|+..... ......... ...... ... ... ....+
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-~~~~~~~~~-~~~~~~-~~~--~~~----~~~~~ 217 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-LLELFKKIG-KPKPPF-PPP--EWK----ISPEA 217 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHh-ccCCCC-ccc--ccc----CCHHH
Confidence 0 0111111123455689999999999999999999864211 111111111 110100 000 000 12347
Q ss_pred HHHHHHhccCCCCCCCCHHHHHH
Q 004232 726 ISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 726 ~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+++.+|+..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 78999999999999999999986
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=3e-27 Score=269.99 Aligned_cols=260 Identities=13% Similarity=0.116 Sum_probs=152.6
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-C----CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-N----GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~----g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
..++|++.+.||+|+||.||+|+.. + +..||||++...... +.+..| .+....+.+++.++..+.....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~-- 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVS-- 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccc--
Confidence 4678999999999999999999964 4 689999987643221 111111 1222333444443332221110
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCC-----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPG-----------------KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
.......++||||+++|+|.+++...... ..........++.|++.||+|||+. +|+|||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRD 280 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRD 280 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCc
Confidence 00114689999999999999988653210 0011223456899999999999987 899999
Q ss_pred CCCCceEEcC-CCcEEEecCCCCcccccccc------c---ccCCCCCCc---------------------c-cCCCCCC
Q 004232 619 VKTNNILLNE-HRIAKLSDYGLSIVSEDINS------V---GGKQEDPNS---------------------W-EMTKLED 666 (766)
Q Consensus 619 lk~~NILld~-~~~~kl~DFGla~~~~~~~~------~---~~~~~~~~~---------------------~-~~~~~~~ 666 (766)
|||+|||+++ ++.+||+|||+|+....... . .+..++... | ..+..++
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9999999995 57999999999964321100 0 000000000 0 0123356
Q ss_pred CEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-cCccccccccccCC----C--CHHHHHHHHHHHHHhccCCCCC
Q 004232 667 DVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-EGRQRLVDPVVMAT----S--SLESLSIVISIANKCICSESWS 739 (766)
Q Consensus 667 DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~----~--~~~~~~~~~~l~~~C~~~~p~~ 739 (766)
|||||||++|||+++..+.+.........+...... .......++..... . .........+|+.+|++.||.+
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~k 440 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQ 440 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCccc
Confidence 999999999999998665432111110101000000 00000011100000 0 0000112457999999999999
Q ss_pred CCCHHHHHHH
Q 004232 740 RPSFEDILWN 749 (766)
Q Consensus 740 RPs~~ev~~~ 749 (766)
|||++|+++.
T Consensus 441 R~ta~e~L~H 450 (566)
T PLN03225 441 RISAKAALAH 450 (566)
T ss_pred CCCHHHHhCC
Confidence 9999999864
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=2.7e-28 Score=233.48 Aligned_cols=259 Identities=17% Similarity=0.277 Sum_probs=172.6
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccC--ChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPS--SKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~--~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|+-...||+|.||.||+|+. .+|+.||+|++-. .+...-....+|+++|..++|+|++.++..|....+...-....
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 33456899999999999985 4678899886532 22223345678999999999999999999987643211101134
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+|+|+++|+. ||...|.... ..++..+..+++.++..||.|+|.. .|+|||+|++|+||+.++..||+|||+++
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar 172 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLAR 172 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccccc
Confidence 8999999998 8888886543 2377888999999999999999998 78999999999999999999999999996
Q ss_pred cccccccccc---------CCCCC----CcccCCCCCCCEeehhHHHHHHhcCCCccccCcc-chHHHHhhh----hccc
Q 004232 642 VSEDINSVGG---------KQEDP----NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ-FLQEELDSL----NSQE 703 (766)
Q Consensus 642 ~~~~~~~~~~---------~~~~~----~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~-~~~~~~~~~----~~~~ 703 (766)
.......... .+..| .....++.+.|||.-||||.||.||.+-+..... .....+..+ ..+.
T Consensus 173 ~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkev 252 (376)
T KOG0669|consen 173 AFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEV 252 (376)
T ss_pred ceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCccc
Confidence 5432111110 00011 1123456688999999999999999866543211 001111111 0000
Q ss_pred C-------ccccc--cccccCCC--CHHHH------HHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 G-------RQRLV--DPVVMATS--SLESL------SIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 ~-------~~~~~--d~~~~~~~--~~~~~------~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+ ..+-+ .|...... -.+.+ ...++|+.+.+..||.+|+..++++..
T Consensus 253 WP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 253 WPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred CCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 0 00000 10000000 01111 146789999999999999999888654
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.7e-27 Score=241.99 Aligned_cols=192 Identities=21% Similarity=0.363 Sum_probs=150.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.+|....+||+|+||+|..|..+ +.+.+|||++++... .+.+--..|-++|+-- +-|.++++..++..-
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm------ 422 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM------ 422 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh------
Confidence 46888999999999999999754 577899999986532 2233334455666544 678999998877664
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
+.+|+||||+.+|+|-.++++-+. +..+....+|.+||-||-|||+. +|+.||||..||+||.+|++||+||
T Consensus 423 --DRLyFVMEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DF 494 (683)
T KOG0696|consen 423 --DRLYFVMEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADF 494 (683)
T ss_pred --hheeeEEEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeec
Confidence 379999999999999999987543 55667788999999999999998 9999999999999999999999999
Q ss_pred CCCccc--cccc-c-cccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 638 GLSIVS--EDIN-S-VGGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 638 Gla~~~--~~~~-~-~~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
|+++.- +... . ..++ .++...+.++...+|+|||||+||||+.|++||+..
T Consensus 495 GmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 495 GMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred ccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 998642 1111 1 1111 123334566777889999999999999999999843
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=2.1e-27 Score=224.39 Aligned_cols=250 Identities=19% Similarity=0.310 Sum_probs=181.0
Q ss_pred hcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.+|+|.|+.|+.|. ..+.+.++||.++..++ +.+++|+.+|..++ |||||+|++...++.+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~S------ 107 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPES------ 107 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCccc------
Confidence 4678888999999999999998 56788899999976543 67899999999997 9999999999988764
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYG 638 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFG 638 (766)
....||+||+.+-+..+.-. .++-.....++.++.+||.|+|+. ||+|||+||.|++||. .-..++.|+|
T Consensus 108 ktpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 108 KTPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred cCchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecc
Confidence 35689999999999887653 255667778899999999999998 9999999999999994 5679999999
Q ss_pred CCccccccccc----cc---CC-CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH--HhhhhcccCcc--
Q 004232 639 LSIVSEDINSV----GG---KQ-EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE--LDSLNSQEGRQ-- 706 (766)
Q Consensus 639 la~~~~~~~~~----~~---~~-~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~--~~~~~~~~~~~-- 706 (766)
+|.+....... +. ++ +....+..+...-|+|||||++.+|+..+.||..+.+..... +..+...+...
T Consensus 179 LAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Y 258 (338)
T KOG0668|consen 179 LAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAY 258 (338)
T ss_pred hHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHH
Confidence 99665432211 11 11 122233456667799999999999999999987543321111 11111110000
Q ss_pred -----ccccccccC----------------CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 -----RLVDPVVMA----------------TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 -----~~~d~~~~~----------------~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
--.||.... +...-...++++++.+.+.+|-++|||++|.+..
T Consensus 259 l~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 259 LNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 001221110 0000012457899999999999999999998754
No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=216.34 Aligned_cols=196 Identities=22% Similarity=0.343 Sum_probs=149.0
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHH-HHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~-l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++......||+|+||.|-+-+. .+|+..|||++...- .+..++..+|+++ ++....|.+|.++|...+.+
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg------- 118 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG------- 118 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc-------
Confidence 3344456799999999988874 579999999997542 3445667778876 45568999999999887764
Q ss_pred ceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+++.||.|.- +|..+-++. ..+..++....-+||..|..||.|||+.. .++|||+||+|||++.+|++|+||||
T Consensus 119 -dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 119 -DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred -cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccc
Confidence 68999999975 666554331 12334677778899999999999999974 79999999999999999999999999
Q ss_pred CCccccccc----ccccCCCCC-C------cccCCCCCCCEeehhHHHHHHhcCCCccccCc
Q 004232 639 LSIVSEDIN----SVGGKQEDP-N------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKG 689 (766)
Q Consensus 639 la~~~~~~~----~~~~~~~~~-~------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~ 689 (766)
++....+.- ..++++..+ . ....++.++||||+|+.+.||.+++.|++...
T Consensus 195 IsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 195 ISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred cceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 996654321 122222111 1 11356779999999999999999999997544
No 389
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.93 E-value=4.5e-26 Score=237.84 Aligned_cols=236 Identities=19% Similarity=0.312 Sum_probs=168.4
Q ss_pred CCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
.++||+|.||+||-|.. ++|+.||||.+.+.+ ......++.|+.||.+++||.||.|--.|..+ +.++.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~--------ervFV 640 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETP--------ERVFV 640 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCC--------ceEEE
Confidence 47899999999999985 579999999997653 23347789999999999999999998777765 37999
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC---CcEEEecCCCCc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKLSDYGLSI 641 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~DFGla~ 641 (766)
|||-+.+.-|.-.|.... + .|+......++.||..||.|||.. +|+|+||||+|||+.+. .++|+||||+|+
T Consensus 641 VMEKl~GDMLEMILSsEk-g-RL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 641 VMEKLHGDMLEMILSSEK-G-RLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred EehhhcchHHHHHHHhhc-c-cchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 999987644444444332 2 266666677889999999999997 89999999999999743 379999999998
Q ss_pred ccccccccccCCCCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 642 VSEDINSVGGKQEDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
...+..-....-+.|.+. ..+...-|+||.|||+|.-++|-.||.++++. .+.+.. ..-+..|...
T Consensus 716 iIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI-ndQIQN------AaFMyPp~PW 788 (888)
T KOG4236|consen 716 IIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI-NDQIQN------AAFMYPPNPW 788 (888)
T ss_pred ecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch-hHHhhc------cccccCCCch
Confidence 876543221111222222 23444569999999999999999999754432 111111 1111122222
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDIL 747 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~ 747 (766)
.+.+ ..+++++..-++..-.+|-|.++-+
T Consensus 789 ~eis----~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 789 SEIS----PEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred hhcC----HHHHHHHHHHHHHHHHHhcchHhhc
Confidence 2222 3367788888888888888877654
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=2.2e-25 Score=245.80 Aligned_cols=236 Identities=21% Similarity=0.315 Sum_probs=161.9
Q ss_pred CCcCCceecCCcee-EEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceE
Q 004232 485 FDMSAIMGEGSYGK-LYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 485 f~~~~~lG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
|.-.+++|.|+-|+ ||+|.++ |+.||||++-.. ......+||+.|+.- +|||||++++ .+.+ ....
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc--~E~d------~qF~ 578 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYC--SEQD------RQFL 578 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEe--eccC------CceE
Confidence 44567889998875 8999986 789999987432 234567899999887 5999999964 4432 1479
Q ss_pred EEEEEccCCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---C--CcEEEec
Q 004232 563 FLVYEFMSNGNFRTHISENTPG-KVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---H--RIAKLSD 636 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~--~~~kl~D 636 (766)
|+..|.|.- +|.+++...... ....-.....+..|+++|+++||+. +||||||||.||||+. + ..|+|+|
T Consensus 579 YIalELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 579 YIALELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 999999987 999998763111 1111133466788999999999996 8999999999999986 3 4799999
Q ss_pred CCCCccccccccccc---CCCCCCcccC--------CCCCCCEeehhHHHHHHhcC-CCccccCccchHHHHhhhhcccC
Q 004232 637 YGLSIVSEDINSVGG---KQEDPNSWEM--------TKLEDDVFSFGFMLLESVAG-PSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 637 FGla~~~~~~~~~~~---~~~~~~~~~~--------~~~~~DV~SfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
||+++......+... .......|.. .+..+|++|+|||+|..+|| +.||.. ...+....+.....
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd---~~~R~~NIl~~~~~ 731 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD---SLERQANILTGNYT 731 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc---hHHhhhhhhcCccc
Confidence 999976543222111 1111222322 23467999999999999997 888853 22222222211111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...+ .+. .++ ++.+|+.+.+..+|..||++.+|+.
T Consensus 732 L~~L------~~~-~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 732 LVHL------EPL-PDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eeee------ccC-chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1111 111 111 5779999999999999999999973
No 391
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.92 E-value=1.2e-26 Score=245.30 Aligned_cols=268 Identities=23% Similarity=0.234 Sum_probs=179.2
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
|+.|.+...--+++..=.++++|+|++|.|+..--+.|.+|.+|..|-|++|+++...+..|.+|++|+.|+|..|++.-
T Consensus 156 LSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iri 235 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRI 235 (873)
T ss_pred hhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceee
Confidence 44444333333344444556666666666655555556666666666666666654444555556666666666665543
Q ss_pred CCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCC---C
Q 004232 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPK---L 256 (766)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~---~ 256 (766)
.---.|.+|++|+.|.|..|.++..-...|..|.++++|+|+.|+++..-.. +.+|+.|+.|+||+|.+...-++ .
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh
Confidence 3233455666666666666666655555666677777777777777654332 66778888888888877654443 3
Q ss_pred CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCc---cCCCCCCcc
Q 004232 257 PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPK---NLNCGGKLV 333 (766)
Q Consensus 257 ~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~---~~~~~~~L~ 333 (766)
.+.|..|+|++|+++..-+..|..+.+|++|+|++|.++.+-...|..+++|+.|||++|.+++.|.+ .|..+.+|+
T Consensus 316 tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 316 TQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred cccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 46778888888888877778888888888888888888877777788888888888888888877654 356677888
Q ss_pred EEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 334 FFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 334 ~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
.|++.+|++....-..+..+..|..|++.+|.+.+
T Consensus 396 kL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaS 430 (873)
T KOG4194|consen 396 KLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIAS 430 (873)
T ss_pred heeecCceeeecchhhhccCcccceecCCCCccee
Confidence 88888888875555567778888888888887654
No 392
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.92 E-value=2.7e-24 Score=214.78 Aligned_cols=202 Identities=27% Similarity=0.474 Sum_probs=164.3
Q ss_pred eecCCceeEEEEEecC-CceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEc
Q 004232 491 MGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEF 568 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey 568 (766)
||+|++|.||+++... ++.+++|++...... ..+.+.+|++.+++++|++++++++++.... ..++++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~--------~~~~~~e~ 72 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN--------HLYLVMEY 72 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC--------eEEEEEec
Confidence 6899999999999754 899999998765432 4567899999999999999999999988653 68999999
Q ss_pred cCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCCCCccccccc
Q 004232 569 MSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYGLSIVSEDIN 647 (766)
Q Consensus 569 ~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFGla~~~~~~~ 647 (766)
+++++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 73 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 73 CEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999999987542 2478999999999999999999997 8999999999999998 8999999999986543321
Q ss_pred --c--c----ccCCCCCCccc-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCC
Q 004232 648 --S--V----GGKQEDPNSWE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSS 718 (766)
Q Consensus 648 --~--~----~~~~~~~~~~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 718 (766)
. . ....++..... ..+.++|+|++|++++|+
T Consensus 148 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------- 187 (215)
T cd00180 148 SLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------- 187 (215)
T ss_pred chhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------
Confidence 0 0 00111111111 445678999999999998
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 719 LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 719 ~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 236788999999999999999999864
No 393
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4.7e-25 Score=234.80 Aligned_cols=154 Identities=21% Similarity=0.364 Sum_probs=128.0
Q ss_pred cCHHHHHHHhc---CCCcCCceecCCceeEEEEE-ecCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCccccc
Q 004232 473 FTLEELKEATN---NFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLL 545 (766)
Q Consensus 473 ~~~~~l~~~~~---~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~ 545 (766)
..|-.|+++.- -|...+.||-|+||+|.+++ .++...+|.|.+.+.+ ......++.|-+||+..+.+-||+|+
T Consensus 616 SnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLy 695 (1034)
T KOG0608|consen 616 SNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLY 695 (1034)
T ss_pred hhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEE
Confidence 34556666643 36667889999999999997 4567788999987654 34466788999999999999999999
Q ss_pred ceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceE
Q 004232 546 GHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNIL 625 (766)
Q Consensus 546 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NIL 625 (766)
-.|.+.+ .+|+||||++|||+-.+|-+.+ .+...-...++.++..|+++.|.. |+|||||||.|||
T Consensus 696 ySFQDkd--------nLYFVMdYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNIL 761 (1034)
T KOG0608|consen 696 YSFQDKD--------NLYFVMDYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNIL 761 (1034)
T ss_pred EEeccCC--------ceEEEEeccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceE
Confidence 7777653 7999999999999999887553 355555666778899999999987 9999999999999
Q ss_pred EcCCCcEEEecCCCC
Q 004232 626 LNEHRIAKLSDYGLS 640 (766)
Q Consensus 626 ld~~~~~kl~DFGla 640 (766)
||.+|++|++||||.
T Consensus 762 IDrdGHIKLTDFGLC 776 (1034)
T KOG0608|consen 762 IDRDGHIKLTDFGLC 776 (1034)
T ss_pred EccCCceeeeecccc
Confidence 999999999999997
No 394
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.92 E-value=5.7e-26 Score=240.25 Aligned_cols=271 Identities=20% Similarity=0.211 Sum_probs=152.8
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
++++|.+.+.-+..|-++++|+.++|..|.++ .+|...+...+|+.|+|.+|.|+..-..++..++.|+.||||.|.++
T Consensus 84 dlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is 162 (873)
T KOG4194|consen 84 DLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLIS 162 (873)
T ss_pred eccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhh
Confidence 45556555555566677777777777777663 45554444555777777777666555566666666666666666666
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCC------
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN------ 252 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~------ 252 (766)
...-..|..=.++++|+|++|+|+..-...|.++.+|..|.|+.|+++..++. |.+|+.|+.|+|..|++.-.
T Consensus 163 ~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFq 242 (873)
T KOG4194|consen 163 EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQ 242 (873)
T ss_pred cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhc
Confidence 54445555556666666666666655556666666666666666666644332 55566666666666665321
Q ss_pred ------------------CCCC---CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeE
Q 004232 253 ------------------LPKL---PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDL 311 (766)
Q Consensus 253 ------------------~p~~---~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L 311 (766)
-... ..++..++|..|+++..-..++-+++.|+.|+||+|.+..+-++++.-+++|+.|
T Consensus 243 gL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~L 322 (873)
T KOG4194|consen 243 GLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKEL 322 (873)
T ss_pred CchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeE
Confidence 1100 1234444455555544444444445555555555555555444444445555555
Q ss_pred EeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCCcC
Q 004232 312 NLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNVQ 371 (766)
Q Consensus 312 ~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~~ 371 (766)
+|++|+++..-+.+|..+..|+.|+|++|.++..--..+..+++|+.|+++.|.++..++
T Consensus 323 dLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IE 382 (873)
T KOG4194|consen 323 DLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIE 382 (873)
T ss_pred eccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEe
Confidence 555555554444444455555555555555443333344455566666666666655443
No 395
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=8.5e-25 Score=216.96 Aligned_cols=192 Identities=22% Similarity=0.344 Sum_probs=149.9
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.++||+|+|++|..+++ ++.+.+|+|++++.- .++..=++.|-.+..+. +||.+|.+..++...
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqte----- 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTE----- 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhccc-----
Confidence 46799999999999999999985 468899999987642 22233344555555555 799999999877654
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..+++|.||+++|+|--+.++.+ .++......+...|..||.|||++ +|+.||||..|||+|..|++|++|
T Consensus 324 ---srlffvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltd 394 (593)
T KOG0695|consen 324 ---SRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTD 394 (593)
T ss_pred ---ceEEEEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecc
Confidence 37899999999999988876543 377888888888999999999998 999999999999999999999999
Q ss_pred CCCCcccc---ccccccc-CC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 637 YGLSIVSE---DINSVGG-KQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 637 FGla~~~~---~~~~~~~-~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
||+.+.-- +..+..+ ++ ++......+....|+|++||+|+||+.|++||+-
T Consensus 395 ygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 395 YGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred cchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 99986421 2221111 11 1112334456678999999999999999999974
No 396
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3e-25 Score=231.32 Aligned_cols=234 Identities=15% Similarity=0.226 Sum_probs=171.3
Q ss_pred CCCcCCceecCCceeEEEEEecCCc-eEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGT-SVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~-~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+++....||-|+||.|-........ ..|+|++++.. ....+.+..|-.+|-+.+.|.||++|--|.+.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~-------- 492 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDS-------- 492 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccc--------
Confidence 4445567999999999998876433 47888887543 34456788899999999999999999887765
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
+.+|+.||-|-||.+...+++++. ++......++..+.+|++|||++ +||.|||||+|.+||.+|.+|+-|||+
T Consensus 493 kyvYmLmEaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 493 KYVYMLMEACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhhhhHHhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhh
Confidence 378999999999999999987653 66667777888999999999997 899999999999999999999999999
Q ss_pred CcccccccccccCCCCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 640 SIVSEDINSVGGKQEDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 640 a~~~~~~~~~~~~~~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
|+........-+..++|.+. ......+|.||+|+++||++||++||....+ ......+.. .+..+--|.
T Consensus 567 AKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp--mktYn~ILk--Gid~i~~Pr 642 (732)
T KOG0614|consen 567 AKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP--MKTYNLILK--GIDKIEFPR 642 (732)
T ss_pred HHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHh--hhhhhhccc
Confidence 98765433222211222222 2233467999999999999999999974332 222222211 111111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCC
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPS 742 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs 742 (766)
.-.....+++++.+..+|.+|--
T Consensus 643 -------~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 643 -------RITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -------ccchhHHHHHHHHHhcCcHhhhc
Confidence 11123567888888899999964
No 397
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.91 E-value=3e-24 Score=218.19 Aligned_cols=254 Identities=17% Similarity=0.249 Sum_probs=175.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCC--C----CcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRH--P----HLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~H--p----niv~l~g~~~~~~~~ 554 (766)
++.|.+...+|+|.||.|-.+.. +.+..||||+++...+. .+.-..|++++.++.+ | -+|++.+++.-.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr--- 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR--- 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc---
Confidence 67788999999999999999863 35889999999865543 3556679999999943 2 267776666544
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-----
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH----- 629 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----- 629 (766)
...|+|+|.+. -++.+++.++. ..+++-.....++.|+.++++|||+. .++|-||||+|||+-+.
T Consensus 164 -----ghiCivfellG-~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 164 -----GHICIVFELLG-LSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred -----CceEEEEeccC-hhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 37899999774 38999998754 34577788899999999999999998 89999999999998431
Q ss_pred ---------------CcEEEecCCCCccccccccc-----ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCc
Q 004232 630 ---------------RIAKLSDYGLSIVSEDINSV-----GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKG 689 (766)
Q Consensus 630 ---------------~~~kl~DFGla~~~~~~~~~-----~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~ 689 (766)
..+||.|||-|.......+. .+..++..-...-+.++||||+||||.|+.||..-|...+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 24899999998765433211 1122222222334568999999999999999988776433
Q ss_pred cch-HHHHhhhhcc--------c--------Cc------------cccccccc----cCCCCHHHHHHHHHHHHHhccCC
Q 004232 690 QFL-QEELDSLNSQ--------E--------GR------------QRLVDPVV----MATSSLESLSIVISIANKCICSE 736 (766)
Q Consensus 690 ~~~-~~~~~~~~~~--------~--------~~------------~~~~d~~~----~~~~~~~~~~~~~~l~~~C~~~~ 736 (766)
... ......+..+ . .. ..+.++.. .......+..++.+|+.+.+..|
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 111 0011111000 0 00 00011000 00112345567999999999999
Q ss_pred CCCCCCHHHHHHH
Q 004232 737 SWSRPSFEDILWN 749 (766)
Q Consensus 737 p~~RPs~~ev~~~ 749 (766)
|.+|+|++|+++.
T Consensus 394 P~~RiTl~EAL~H 406 (415)
T KOG0671|consen 394 PARRITLREALSH 406 (415)
T ss_pred ccccccHHHHhcC
Confidence 9999999998753
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.90 E-value=3.4e-23 Score=209.95 Aligned_cols=190 Identities=26% Similarity=0.418 Sum_probs=154.3
Q ss_pred CCcCCceecCCceeEEEEEecC-CceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 485 FDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
|++.+.||+|++|.||+|.... ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.... ..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~--------~~ 72 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE--------PL 72 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC--------ce
Confidence 4566889999999999999764 889999999765444 5678999999999999999999999987653 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++++||+++++|.+++..... .+++.....++.+++.++.|||+. +++|+|++++||+++.++.++|+|||.+..
T Consensus 73 ~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 73 YLVMEYCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EEEEeccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 999999999999999876432 178899999999999999999997 899999999999999999999999999865
Q ss_pred ccccc----c--ccc---CCCCCC-cccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 643 SEDIN----S--VGG---KQEDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 643 ~~~~~----~--~~~---~~~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
..... . ... ..++.. .....+.++||||||++++||++|+.||..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 43321 0 000 111111 113344589999999999999999999964
No 399
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.90 E-value=3.6e-26 Score=242.69 Aligned_cols=256 Identities=26% Similarity=0.329 Sum_probs=185.4
Q ss_pred CCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCc-cCCCccCCCCCCCCEEEccCCcCCCCCCcc
Q 004232 107 IDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLF-GSVPPKISTMVKLQTLILDDNFFNNTIPNW 185 (766)
Q Consensus 107 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 185 (766)
...+|+.++.|.+|++|++++|++... -..++.|+.|+.+++..|++. .-+|+.+..|..|..||||+|++. ..|..
T Consensus 44 L~~vPeEL~~lqkLEHLs~~HN~L~~v-hGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~ 121 (1255)
T KOG0444|consen 44 LEQVPEELSRLQKLEHLSMAHNQLISV-HGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTN 121 (1255)
T ss_pred hhhChHHHHHHhhhhhhhhhhhhhHhh-hhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchh
Confidence 456899999999999999999998654 356888999999999999985 348899999999999999999998 78988
Q ss_pred cCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCC----CCCCC-----
Q 004232 186 FDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDS----NLPKL----- 256 (766)
Q Consensus 186 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~----~~p~~----- 256 (766)
+..-+++-+|+|++|+|....-+-|-+|+.|-.||||+|++...+|.+..|..|++|+|++|.+.- .+|.+
T Consensus 122 LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~v 201 (1255)
T KOG0444|consen 122 LEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSV 201 (1255)
T ss_pred hhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhh
Confidence 999999999999999998443345689999999999999999999999999999999999997742 12221
Q ss_pred -------------C------CCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCc
Q 004232 257 -------------P------RGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNK 317 (766)
Q Consensus 257 -------------~------~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 317 (766)
| .+|..++||.|++. .+|+.+-++.+|+.|+||+|+++.+-. ....+.+|++|+||.|+
T Consensus 202 Lhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~iteL~~-~~~~W~~lEtLNlSrNQ 279 (1255)
T KOG0444|consen 202 LHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKITELNM-TEGEWENLETLNLSRNQ 279 (1255)
T ss_pred hhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCceeeeec-cHHHHhhhhhhccccch
Confidence 1 23444555555555 455555555556666666665554432 33444555666666666
Q ss_pred CcccCCccCCCCCCccEEeCcCCccc-cCCCCCCCCCCCCceeecCCCcCC
Q 004232 318 FSGSLPKNLNCGGKLVFFDISNNKLT-GGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 318 l~g~~p~~~~~~~~L~~L~ls~N~l~-g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
++ .+|+.++.+++|+.|.+.+|+++ ..+|+.++.+..|.++..++|.+.
T Consensus 280 Lt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE 329 (1255)
T KOG0444|consen 280 LT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE 329 (1255)
T ss_pred hc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc
Confidence 65 55666666666666666666554 235666666666666666666543
No 400
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.8e-24 Score=209.34 Aligned_cols=193 Identities=17% Similarity=0.304 Sum_probs=147.5
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.+..+-||-|+||+||..+. ++|+.||.|++...- ....+++.+|+++|..++|.|++..++....+. .+ -.++
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph--~d-fFqE 131 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPAN--PS-FFQE 131 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCC--ch-HHHH
Confidence 34568899999999999885 479999999987542 344678899999999999999999988654431 11 1246
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+|.++|.|.. ||.+.+-.- ..++-....-+..||.+||.|||+. +|+||||||.|.|++.+...||||||+++
T Consensus 132 iYV~TELmQS-DLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 132 LYVLTELMQS-DLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHHh-hhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccc
Confidence 7889999876 787776532 2366667777889999999999997 89999999999999999999999999998
Q ss_pred ccccccccccC----------CCCCCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 642 VSEDINSVGGK----------QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 642 ~~~~~~~~~~~----------~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
..+.......+ ++.......++...||||.|||..|++-.+.-|..
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 75433221111 11112223466688999999999999987766653
No 401
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.90 E-value=2.8e-23 Score=240.68 Aligned_cols=312 Identities=22% Similarity=0.340 Sum_probs=159.5
Q ss_pred CChHHHHHHHHHHHcCCCCCCCCC----ccCCCCCCCCCCC-----------CCccceEecCCCEEEEEeCCCCCCCCC-
Q 004232 26 LQSSQTQVLLQLRKHLEYPKQLEI----WINHGADFCYISS-----------STQVNITCQDNFITELKIIGDKPSNVG- 89 (766)
Q Consensus 26 ~~~~~~~aLl~~k~~~~~~~~l~~----W~~~~~~~C~~~~-----------~~~~gv~C~~~~v~~l~l~~~~~~~~~- 89 (766)
..+.|.+.+++..+.+.-|+.+++ |+.. .++|.-.. .+...|.|..+.||.+.+.|.......
T Consensus 60 ~~~~~~~~~~~~~~~l~~p~~~~~~~~~~~~~-~~fc~~~~~~~~~l~~~~~~~~~tv~~~~~~vt~l~~~g~~~~~~~~ 138 (754)
T PRK15370 60 ASPEEIKSKFECLRMLAFPAYADNIQYSRGGA-DQYCILSENSQEILSIVFNTEGYTVEGGGKSVTYTRVTESEQASSAS 138 (754)
T ss_pred CCHHHHHHHHHHHHHhcCCchhhccccccCCC-CcccccCCcchhhheeeecCCceEEecCCCcccccccccccccccCC
Confidence 567899999999999988876655 9765 79998765 466779999889999998775432211
Q ss_pred -CCCccccc--------cccCCCcccCCcccccc-----cCCCCCCEEecccccccccCCccccCCCCCCEEecccccCc
Q 004232 90 -NFDGFASA--------NASLSENFSIDSFVTTL-----ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLF 155 (766)
Q Consensus 90 -~~~~~~~~--------~~~l~~n~~~~~~~~~l-----~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~ 155 (766)
.-+...+. .....+. ..--..+ .-..+.+.|+|++++++. +|..+. ++|+.|+|++|+|+
T Consensus 139 ~~~~~~~~~~~w~~w~~~~~~~~~---~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt 212 (754)
T PRK15370 139 GSKDAVNYELIWSEWVKEAPAKEA---ANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK 212 (754)
T ss_pred CCCChhhHHHHHHHHHhcCCCCcc---ccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC
Confidence 10000000 0000000 0000000 111234555555555542 444332 34556666666555
Q ss_pred cCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCC
Q 004232 156 GSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSS 235 (766)
Q Consensus 156 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 235 (766)
.+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. ++|+.|+|++|+++..+..+.
T Consensus 213 -sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~- 282 (754)
T PRK15370 213 -SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKISCLPENLP- 282 (754)
T ss_pred -cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccCccccccC-
Confidence 3444332 35566666666555 3344332 24555666666555 4454442 355556666555553222222
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeec
Q 004232 236 LGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLAS 315 (766)
Q Consensus 236 l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~ 315 (766)
++|+.|++++|+|++..+.++.++..|++++|+++. +|..+ .++|+.|++++|.+++++. .+. ++|+.|+|++
T Consensus 283 -~sL~~L~Ls~N~Lt~LP~~lp~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt~LP~-~l~--~sL~~L~Ls~ 355 (754)
T PRK15370 283 -EELRYLSVYDNSIRTLPAHLPSGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALTSLPA-SLP--PELQVLDVSK 355 (754)
T ss_pred -CCCcEEECCCCccccCcccchhhHHHHHhcCCcccc-CCccc--cccceeccccCCccccCCh-hhc--CcccEEECCC
Confidence 355555666655554333344455555555555553 33322 1355555555555555332 221 4555555555
Q ss_pred CcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 316 NKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 316 N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
|+|+ .+|..+. .+|+.|+|++|+|+ .+|..+. ..++.|++++|.++
T Consensus 356 N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 356 NQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred CCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc
Confidence 5555 3444332 34555555555555 3343332 13455555555554
No 402
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.90 E-value=1.2e-25 Score=238.68 Aligned_cols=251 Identities=30% Similarity=0.334 Sum_probs=174.3
Q ss_pred ccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCC
Q 004232 110 FVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSL 189 (766)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 189 (766)
.|..+.+-.++-+|+||+|+|..+.-..|.+|+.|-+||||+|++. .+|+.+..|.+|++|.|++|.+.----..+-.|
T Consensus 118 vP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsm 196 (1255)
T KOG0444|consen 118 VPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSM 196 (1255)
T ss_pred cchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccc
Confidence 3444444444444444444443222223444555555555555543 344445555555555555554432211222344
Q ss_pred CCCCEEEccCccCC-CCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCC--CCCCCcEEEcc
Q 004232 190 PSLTFLSMRNNKLA-GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPK--LPRGLVMAFLS 266 (766)
Q Consensus 190 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~l~ls 266 (766)
++|++|.+++.+-+ ..+|.++..|.+|..+|||.|++.-.+..+.++.+|+.|+||+|+++..--. ...++..|+||
T Consensus 197 tsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlS 276 (1255)
T KOG0444|consen 197 TSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLS 276 (1255)
T ss_pred hhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccc
Confidence 45555555544322 3578888888899999999999886655688889999999999988753222 23567888999
Q ss_pred CCcCccCCcccccCCCCCCEEEccCCcCC--CCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCcccc
Q 004232 267 NNSFSGEIPKQYGQLNQLQQLDMSFNALR--GMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 267 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
.|+++ .+|+.+..++.|+.|.+.+|+++ | +|..++.+.+|+.+..++|++. .+|+.++.|..|+.|.|++|.+.
T Consensus 277 rNQLt-~LP~avcKL~kL~kLy~n~NkL~FeG-iPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi- 352 (1255)
T KOG0444|consen 277 RNQLT-VLPDAVCKLTKLTKLYANNNKLTFEG-IPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI- 352 (1255)
T ss_pred cchhc-cchHHHhhhHHHHHHHhccCcccccC-CccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-
Confidence 99998 68999999999999999999875 4 4567899999999999999987 88999999999999999999987
Q ss_pred CCCCCCCCCCCCceeecCCCc
Q 004232 345 GLPSCLSNESDKRVVKFRGNC 365 (766)
Q Consensus 345 ~~p~~~~~~~~l~~l~l~~N~ 365 (766)
.+|..+.-++.+.+|+++.|.
T Consensus 353 TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 353 TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred echhhhhhcCCcceeeccCCc
Confidence 789999889999999999885
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=7.1e-24 Score=228.05 Aligned_cols=245 Identities=18% Similarity=0.292 Sum_probs=177.1
Q ss_pred HhcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..++|+....+|.|.||.|||++ ...++..|||.++-.......-..+|+-+++..+|||||.++|-+...+
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d------- 85 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD------- 85 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-------
Confidence 45788899999999999999998 4579999999998776666777888999999999999999999887653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..|+.||||.+|+|++.-+-.. +++..+...+.+...+|++|||+. +=+|||||-.|||+.+.+.+|++|||.
T Consensus 86 -klwicMEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgv 158 (829)
T KOG0576|consen 86 -KLWICMEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGV 158 (829)
T ss_pred -CcEEEEEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCc
Confidence 6899999999999999766443 377777777888999999999997 558999999999999999999999999
Q ss_pred CcccccccccccCCCCCCccc-----------CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc-Cccc
Q 004232 640 SIVSEDINSVGGKQEDPNSWE-----------MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE-GRQR 707 (766)
Q Consensus 640 a~~~~~~~~~~~~~~~~~~~~-----------~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~-~~~~ 707 (766)
+......-..........+|+ .+...+|||+.|+.-.|+.--.+|..+... .....-+.... ....
T Consensus 159 saqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--mr~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 159 SAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--MRALFLMTKSGFQPPT 236 (829)
T ss_pred hhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch--HHHHHHhhccCCCCCc
Confidence 844321110000001112333 344578999999999998877766432111 01000011111 1112
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..|+.-. ...+-++++.|+-.+|++||+.+..+.
T Consensus 237 lkDk~kw-------s~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 237 LKDKTKW-------SEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ccCCccc-------hHHHHHHHHHHhcCCCccCCChhhhee
Confidence 2222211 122557788999999999999876543
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.89 E-value=5.4e-23 Score=199.46 Aligned_cols=243 Identities=17% Similarity=0.262 Sum_probs=164.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.|.+.+.+|+|.||.+..++.+ +.+.+++|.++... ...++|.+|..---.+ .|.||+.-+++..+.. +
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~-------d 95 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS-------D 95 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcC-------c
Confidence 56788899999999999999865 57789999887543 3457888887544444 4899999887655432 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CC-CcEEEecCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EH-RIAKLSDYG 638 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~-~~~kl~DFG 638 (766)
.+++++||+|.|||..-+...+ +......+++.|++.|+.|+|+. .+||||||.+||||- .+ ..+|+||||
T Consensus 96 ~YvF~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG 168 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFG 168 (378)
T ss_pred eEEEeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecc
Confidence 6889999999999998775433 56667788999999999999997 799999999999994 33 479999999
Q ss_pred CCccccccccc-c-----cCCC----CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch---HHHHhhh-hcccC
Q 004232 639 LSIVSEDINSV-G-----GKQE----DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL---QEELDSL-NSQEG 704 (766)
Q Consensus 639 la~~~~~~~~~-~-----~~~~----~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~---~~~~~~~-~~~~~ 704 (766)
++......... . ..++ .+...-...+.+|||.||++++-.+||+.|+....... .++.... .....
T Consensus 169 ~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 169 LTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA 248 (378)
T ss_pred cccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence 98544321110 0 0000 00111112345799999999999999999987432211 1211111 11111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.+.+ .+ ..++++-++-+..+|.+|--..++-++
T Consensus 249 ~P~~F~~-----fs----~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 249 LPKKFNP-----FS----EKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred Cchhhcc-----cC----HHHHHHHHHhcCCcccccchhHHHHHH
Confidence 1222221 12 235566778888999999555555544
No 405
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.87 E-value=1.5e-25 Score=227.76 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=226.2
Q ss_pred ccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCC
Q 004232 110 FVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSL 189 (766)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 189 (766)
+.+.+.+|..|.+|++++|+++ .+|++++.+..++.|+.|+|+++ .+|+.++.+.+|..|+.++|.+. .+|+.++.+
T Consensus 60 l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~ 136 (565)
T KOG0472|consen 60 LREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRL 136 (565)
T ss_pred ccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHH
Confidence 4467889999999999999985 67888999999999999999997 78999999999999999999998 678889999
Q ss_pred CCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC--CCCcEEEccC
Q 004232 190 PSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLP--RGLVMAFLSN 267 (766)
Q Consensus 190 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~--~~l~~l~ls~ 267 (766)
..|+.|+..+|+++ ..|+.++++.+|..|++.+|++...+|..-+++.|+.||..+|-++..+|.+. ..|..++|..
T Consensus 137 ~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~ 215 (565)
T KOG0472|consen 137 LDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRR 215 (565)
T ss_pred hhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhh
Confidence 99999999999998 68888999999999999999999988887679999999999999987777653 5788899999
Q ss_pred CcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCC
Q 004232 268 NSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLP 347 (766)
Q Consensus 268 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p 347 (766)
|++. .+| +|+.++.|.+|.++.|++.-++.....++++|..|||..|++. +.|+.++.+.+|.+||+|+|.++ .+|
T Consensus 216 Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp 291 (565)
T KOG0472|consen 216 NKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLP 291 (565)
T ss_pred cccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCC
Confidence 9998 577 8999999999999999999888877779999999999999998 89999999999999999999999 688
Q ss_pred CCCCCCCCCceeecCCCcCC
Q 004232 348 SCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 348 ~~~~~~~~l~~l~l~~N~l~ 367 (766)
.+++++ .++.+.+.||++.
T Consensus 292 ~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 292 YSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred cccccc-eeeehhhcCCchH
Confidence 899999 8999999999764
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-22 Score=199.95 Aligned_cols=248 Identities=19% Similarity=0.217 Sum_probs=166.3
Q ss_pred CCceecCCceeEEEEE-ecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGR-LENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
...+|.|.- .|..+- .-.++.||+|++... .....++..+|..+|..+.|+||++++.++...... ......|+
T Consensus 22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l--~~~~e~y~ 98 (369)
T KOG0665|consen 22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL--EEFQEVYL 98 (369)
T ss_pred ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccH--HHHHhHHH
Confidence 445677765 444443 224789999988543 233456778899999999999999999988754311 11246899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
|||||.. +|.+.++.. ++-.....+..|+..|++|||+. +|+||||||+||++..+..+||.|||+|+...
T Consensus 99 v~e~m~~-nl~~vi~~e-----lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~ 169 (369)
T KOG0665|consen 99 VMELMDA-NLCQVILME-----LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTED 169 (369)
T ss_pred HHHhhhh-HHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccC
Confidence 9999986 888877632 56677788999999999999998 89999999999999999999999999996543
Q ss_pred cc-ccc------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc---------------
Q 004232 645 DI-NSV------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ--------------- 702 (766)
Q Consensus 645 ~~-~~~------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~--------------- 702 (766)
.. ... -+..++..-...+...+||||.||++.||++|..-|... ...+.|..+...
T Consensus 170 ~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~--d~idQ~~ki~~~lgtpd~~F~~qL~~~ 247 (369)
T KOG0665|consen 170 TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK--DHIDQWNKIIEQLGTPDPSFMKQLQPT 247 (369)
T ss_pred cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc--hHHHHHHHHHHHhcCCCHHHHHHhhHH
Confidence 22 000 011122222234667889999999999999998776632 111111111100
Q ss_pred --------cC-----c-cccccccccC--CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 --------EG-----R-QRLVDPVVMA--TSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 --------~~-----~-~~~~d~~~~~--~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+. . ..+.|-.... +.+.-....+-+++.+.+..+|++|-|.+++++.
T Consensus 248 ~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 248 VRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 0 0011111111 0111123346788999999999999999998764
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.87 E-value=2.1e-22 Score=213.42 Aligned_cols=189 Identities=19% Similarity=0.287 Sum_probs=147.6
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhH-----HHHHHHHHHHHhCC---CCCcccccceeec
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTV-----RNLKLRLDLLAKLR---HPHLVCLLGHCID 550 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~-----~~~~~e~~~l~~l~---Hpniv~l~g~~~~ 550 (766)
.+|.....+|+|+||.|+.|..+ +...|.||.+.+.+. ... -.+-.||+||+.++ |+||++++.+|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45778889999999999999864 467799999876542 111 12557999999997 9999999999998
Q ss_pred CCCCCCcCcceEEEEEEc-cCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 551 GGGRDDYAVNKVFLVYEF-MSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
.+ .+||+||- -++-+|++++.-+. .++..+...|+.||+.|+++||+. +|||||||-+||.+|.+
T Consensus 641 dd--------~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 641 DD--------YYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSN 706 (772)
T ss_pred CC--------eeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecC
Confidence 74 78999996 45678999986543 378889999999999999999997 99999999999999999
Q ss_pred CcEEEecCCCCccccccc------ccccCCCCCCcc-cCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 630 RIAKLSDYGLSIVSEDIN------SVGGKQEDPNSW-EMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~------~~~~~~~~~~~~-~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
|-+|+.|||-|....... +..+..++.... .+...+-|||++|++||-++...-|+
T Consensus 707 g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred CeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence 999999999986654321 111111221111 22334569999999999998887776
No 408
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.87 E-value=6.7e-22 Score=206.97 Aligned_cols=192 Identities=22% Similarity=0.287 Sum_probs=152.3
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC------CCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR------HPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~------Hpniv~l~g~~~~~~~~~ 555 (766)
..|.+....|+|-|++|.+|.. ..|..||||++...... .+.=.+|+++|++|+ --|.++|+-.|...
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk---- 506 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK---- 506 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc----
Confidence 4577788889999999999984 45889999999765433 344567999999985 24789988777664
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcEEE
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAKL 634 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl 634 (766)
+++|||+|-+.- +|++.|.+-+....|.......++.|+..||.+|-.+ +|+|.||||.|||+++. ...||
T Consensus 507 ----nHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKL 578 (752)
T KOG0670|consen 507 ----NHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKL 578 (752)
T ss_pred ----ceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeee
Confidence 489999997765 8999998876555677788889999999999999987 89999999999999965 57999
Q ss_pred ecCCCCccccccccc------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 635 SDYGLSIVSEDINSV------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 635 ~DFGla~~~~~~~~~------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
||||-|....+..-. .+..++..-..++.+..|+||.||.|||+.||+..|+.
T Consensus 579 CDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 579 CDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred ccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 999998765443211 22233333445677788999999999999999988864
No 409
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.86 E-value=9.6e-24 Score=214.72 Aligned_cols=251 Identities=31% Similarity=0.424 Sum_probs=200.4
Q ss_pred cccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCccc-C
Q 004232 109 SFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF-D 187 (766)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~ 187 (766)
.+|+..-+++.|+.||...|-+ +.+|+.++.+.+|+.|+|.+|.+. .+| +|.++..|++|+++.|++. .+|.+. .
T Consensus 174 ~l~~~~i~m~~L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~ 249 (565)
T KOG0472|consen 174 ALPENHIAMKRLKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLK 249 (565)
T ss_pred hCCHHHHHHHHHHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhc
Confidence 3455555588888888877766 678888999999999999999986 566 8999999999999999887 566555 4
Q ss_pred CCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCC----------------
Q 004232 188 SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDS---------------- 251 (766)
Q Consensus 188 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~---------------- 251 (766)
+|++|.+|||++|+++ ..|+++..+.+|.+||+|+|.+++.++.++++ .|+.|.+.+|.+..
T Consensus 250 ~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKy 327 (565)
T KOG0472|consen 250 HLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKY 327 (565)
T ss_pred ccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHH
Confidence 9999999999999998 79999999999999999999999999999999 99999999997621
Q ss_pred --------------------------CCCCC-------------------C---------CCCcEEEccCCcC-------
Q 004232 252 --------------------------NLPKL-------------------P---------RGLVMAFLSNNSF------- 270 (766)
Q Consensus 252 --------------------------~~p~~-------------------~---------~~l~~l~ls~N~l------- 270 (766)
.+|.. | ...+..+++.|++
T Consensus 328 Lrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L 407 (565)
T KOG0472|consen 328 LRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRL 407 (565)
T ss_pred HHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhh
Confidence 00100 0 0022334444433
Q ss_pred ----------------ccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc---------------
Q 004232 271 ----------------SGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS--------------- 319 (766)
Q Consensus 271 ----------------~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------- 319 (766)
.+.+|..++.+++|+.|+|++|.+..+|. .++.+..|+.||++.|+|.
T Consensus 408 ~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~LP~-e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtl 486 (565)
T KOG0472|consen 408 VELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDLPE-EMGSLVRLQTLNLSFNRFRMLPECLYELQTLETL 486 (565)
T ss_pred HHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhcch-hhhhhhhhheecccccccccchHHHhhHHHHHHH
Confidence 23567777888999999999998887664 6778888999999999885
Q ss_pred -------ccCCcc-CCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 320 -------GSLPKN-LNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 320 -------g~~p~~-~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
+.++.+ +..+.+|..|||.+|.+. .+|..++++++++.+.+.||+|.
T Consensus 487 las~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 487 LASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 233333 667788999999999998 78889999999999999999887
No 410
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2e-22 Score=195.13 Aligned_cols=239 Identities=19% Similarity=0.355 Sum_probs=170.0
Q ss_pred cCCceecCCceeEEEEEecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEE
Q 004232 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
+.-+|.+...|..|+|+|.. .-+++|+++... ....++|..|.-.|+-+.||||..++|.|..+. .+.+
T Consensus 194 l~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp--------nlv~ 264 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP--------NLVI 264 (448)
T ss_pred hhhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC--------CceE
Confidence 34467788889999999974 445567765432 333578999998999999999999999998863 6899
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe--cCCCCcc
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS--DYGLSIV 642 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~--DFGla~~ 642 (766)
+..|||.|+|+..|++.. .-.++-.+..+++.+||+|++|||+-. |-|..--|.+..|++|++.++||+ |--++.
T Consensus 265 isq~mp~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf- 341 (448)
T KOG0195|consen 265 ISQYMPFGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF- 341 (448)
T ss_pred eeeeccchHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee-
Confidence 999999999999998764 345778889999999999999999853 344445689999999999998875 221111
Q ss_pred cccccccccCCCCCCcccCCC-----------CCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 643 SEDINSVGGKQEDPNSWEMTK-----------LEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~-----------~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
.+.. + .+...|..++ ..+|+|||.+++||+.|...||...... +.-..+..++-+.. +.|
T Consensus 342 -qe~g----r-~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm--ecgmkialeglrv~-ipp 412 (448)
T KOG0195|consen 342 -QEVG----R-AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM--ECGMKIALEGLRVH-IPP 412 (448)
T ss_pred -eccc----c-ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch--hhhhhhhhcccccc-CCC
Confidence 0100 0 0111222211 2579999999999999999999743321 11112222221111 222
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.+ ...+.+|+.-|+..||.+||.|+.|+-.|+++.
T Consensus 413 gi--------s~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 413 GI--------SRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred Cc--------cHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 21 123778899999999999999999999998763
No 411
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.86 E-value=4.1e-22 Score=239.29 Aligned_cols=194 Identities=19% Similarity=0.281 Sum_probs=127.5
Q ss_pred hCCC-CCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 004232 535 KLRH-PHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPG 613 (766)
Q Consensus 535 ~l~H-pniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 613 (766)
.++| +||++++++|.... .+......++.++||+ .++|++++... ...+++.+...++.||++||+|||+. +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGN-LDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCcc-ccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 4556 68889999874332 1112224578889987 55999999743 24588999999999999999999987 8
Q ss_pred cccCCCCCCceEEcC-------------------CCcEEEecCCCCccccccc--------cc-------------c---
Q 004232 614 FFNNRVKTNNILLNE-------------------HRIAKLSDYGLSIVSEDIN--------SV-------------G--- 650 (766)
Q Consensus 614 ivHrdlk~~NILld~-------------------~~~~kl~DFGla~~~~~~~--------~~-------------~--- 650 (766)
|+||||||+||||+. ++.+|++|||+++...... .. +
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 4567777777775321100 00 0
Q ss_pred cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHH
Q 004232 651 GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIAN 730 (766)
Q Consensus 651 ~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~ 730 (766)
+..++......++.++|||||||+||||++|..|+..... ....+.. ....+... ........++.
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~ 246 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLRH-----RVLPPQIL-----LNWPKEASFCL 246 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHHH-----hhcChhhh-----hcCHHHHHHHH
Confidence 0111111123456789999999999999999877642111 1111110 01111111 11223457788
Q ss_pred HhccCCCCCCCCHHHHHHH
Q 004232 731 KCICSESWSRPSFEDILWN 749 (766)
Q Consensus 731 ~C~~~~p~~RPs~~ev~~~ 749 (766)
+||+.+|.+||+|.||++.
T Consensus 247 ~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 247 WLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HhCCCChhhCcChHHHhhc
Confidence 9999999999999999864
No 412
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.85 E-value=5.2e-21 Score=220.44 Aligned_cols=229 Identities=28% Similarity=0.383 Sum_probs=153.6
Q ss_pred CcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccC
Q 004232 108 DSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFD 187 (766)
Q Consensus 108 ~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 187 (766)
..+|..+. .+|+.|++.+|+++. +|. .+++|++|+|++|+|+. +|.. ..+|+.|+|++|.++. +|..+
T Consensus 214 tsLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~~-Lp~lp- 281 (788)
T PRK15387 214 TTLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLTH-LPALP- 281 (788)
T ss_pred CcCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchhh-hhhch-
Confidence 45676665 378888888888864 554 25778888888888873 5543 2456666666666552 33321
Q ss_pred CCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCC-------------------CCCCCCCCCCCEEECCCCC
Q 004232 188 SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGS-------------------LPDLSSLGSLNVLNLSDNK 248 (766)
Q Consensus 188 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-------------------~p~~~~l~~L~~L~ls~N~ 248 (766)
++|+.|+|++|+++. +|.. +++|+.|+|++|++++. +|.+ ..+|++|+|++|+
T Consensus 282 --~~L~~L~Ls~N~Lt~-LP~~---p~~L~~LdLS~N~L~~Lp~lp~~L~~L~Ls~N~L~~LP~l--p~~Lq~LdLS~N~ 353 (788)
T PRK15387 282 --SGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPTL--PSGLQELSVSDNQ 353 (788)
T ss_pred --hhcCEEECcCCcccc-cccc---ccccceeECCCCccccCCCCcccccccccccCcccccccc--ccccceEecCCCc
Confidence 334445555555542 3321 23455555555555432 2221 1367788888888
Q ss_pred CCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCC
Q 004232 249 LDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNC 328 (766)
Q Consensus 249 l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~ 328 (766)
|++ +|..+.++..|++++|++++ +|.. ..+|+.|++++|+|+++|+ . .++|+.|++++|+|++ +|...
T Consensus 354 Ls~-LP~lp~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~LP~-l---~s~L~~LdLS~N~Lss-IP~l~-- 421 (788)
T PRK15387 354 LAS-LPTLPSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTSLPV-L---PSELKELMVSGNRLTS-LPMLP-- 421 (788)
T ss_pred cCC-CCCCCcccceehhhcccccc-Cccc---ccccceEEecCCcccCCCC-c---ccCCCEEEccCCcCCC-CCcch--
Confidence 875 55666777778888888874 5643 3578889999999987654 2 3678899999999984 67543
Q ss_pred CCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCCc
Q 004232 329 GGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNV 370 (766)
Q Consensus 329 ~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 370 (766)
..|+.|++++|+|+ .+|.++.+++++..+++++|++++..
T Consensus 422 -~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~ 461 (788)
T PRK15387 422 -SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERT 461 (788)
T ss_pred -hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchH
Confidence 46788999999998 78988999999999999999998643
No 413
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=1.2e-20 Score=196.97 Aligned_cols=137 Identities=21% Similarity=0.332 Sum_probs=111.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-----C---CCcccccceeecCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-----H---PHLVCLLGHCIDGGG 553 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-----H---pniv~l~g~~~~~~~ 553 (766)
..|.+.++||-|.|.+||.+.. ...+.||+|+.+.... ..+....||++|++++ | .+||+|+++|...+.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 5688889999999999999973 4578999999876543 3456677999999883 3 369999999988653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE 628 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~ 628 (766)
. ..++|||+|++-. +|..+|.... .+.+.......|+.||..||.|||..| +|||-||||+|||+..
T Consensus 157 N----G~HVCMVfEvLGd-nLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 157 N----GQHVCMVFEVLGD-NLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCS 223 (590)
T ss_pred C----CcEEEEEehhhhh-HHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeec
Confidence 2 2579999999865 7777776543 345788889999999999999999987 8999999999999954
No 414
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.85 E-value=9.9e-21 Score=202.49 Aligned_cols=141 Identities=21% Similarity=0.207 Sum_probs=112.5
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec--CCceEEEEEccCC-----hhhhHHHHHHHHHHHHhCCCCCcccccceeecCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE--NGTSVAIRCLPSS-----KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~--~g~~vAvK~l~~~-----~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~ 552 (766)
...++|.+.+.||+|+||+||+|+.. +++.||||++... .....+.+.+|+++|++++|+|+|..+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 34577999999999999999999864 5788899986532 223456799999999999999999633211
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC-CCCceEEcCCCc
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV-KTNNILLNEHRI 631 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl-k~~NILld~~~~ 631 (766)
...++||||+++++|... ... . ...++.++++||+|||+. +|+|||| ||+|||++.++.
T Consensus 91 -------~~~~LVmE~~~G~~L~~~-~~~------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ 150 (365)
T PRK09188 91 -------GKDGLVRGWTEGVPLHLA-RPH------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGE 150 (365)
T ss_pred -------CCcEEEEEccCCCCHHHh-Ccc------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCC
Confidence 146999999999999732 111 0 135678899999999997 8999999 999999999999
Q ss_pred EEEecCCCCcccc
Q 004232 632 AKLSDYGLSIVSE 644 (766)
Q Consensus 632 ~kl~DFGla~~~~ 644 (766)
+||+|||+|+...
T Consensus 151 ikLiDFGlA~~~~ 163 (365)
T PRK09188 151 AAVIDFQLASVFR 163 (365)
T ss_pred EEEEECccceecc
Confidence 9999999997543
No 415
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=6.8e-20 Score=211.22 Aligned_cols=209 Identities=28% Similarity=0.333 Sum_probs=146.6
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCC-----------------CCCCCCEEEccCCcCC
Q 004232 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKIS-----------------TMVKLQTLILDDNFFN 179 (766)
Q Consensus 117 l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~-----------------~l~~L~~L~L~~N~l~ 179 (766)
+++|++|+|++|+|+. +|.. .++|+.|+|++|.++ .+|..+. .+++|+.|+|++|+++
T Consensus 241 p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~N~L~ 315 (788)
T PRK15387 241 PPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT-HLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLA 315 (788)
T ss_pred CCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh-hhhhchhhcCEEECcCCccccccccccccceeECCCCccc
Confidence 3566777777776653 3432 234445555554443 2222110 1245666666666665
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRG 259 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 259 (766)
+ +|... .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++. |.+ ..+|+.|++++|+|++ +|..+.+
T Consensus 316 ~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~L-P~l--p~~L~~L~Ls~N~L~~-LP~l~~~ 383 (788)
T PRK15387 316 S-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLASL-PTL--PSELYKLWAYNNRLTS-LPALPSG 383 (788)
T ss_pred c-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCCC-CCC--Ccccceehhhcccccc-Ccccccc
Confidence 4 33321 245556666666653 4431 24799999999999964 443 3578889999999985 7778888
Q ss_pred CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcC
Q 004232 260 LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (766)
Q Consensus 260 l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~ 339 (766)
|..|++++|+|++ +|.. .++|+.|++++|+|+++|. . ..+|+.|+|++|+|+ .+|..+..+.+|+.|+|++
T Consensus 384 L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~LssIP~-l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~ 454 (788)
T PRK15387 384 LKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTSLPM-L---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 454 (788)
T ss_pred cceEEecCCcccC-CCCc---ccCCCEEEccCCcCCCCCc-c---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCC
Confidence 9999999999995 6654 3689999999999998653 2 357899999999998 7899999999999999999
Q ss_pred CccccCCCCCCC
Q 004232 340 NKLTGGLPSCLS 351 (766)
Q Consensus 340 N~l~g~~p~~~~ 351 (766)
|+|++..|..+.
T Consensus 455 N~Ls~~~~~~L~ 466 (788)
T PRK15387 455 NPLSERTLQALR 466 (788)
T ss_pred CCCCchHHHHHH
Confidence 999998877653
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=6.2e-20 Score=180.65 Aligned_cols=139 Identities=16% Similarity=0.210 Sum_probs=106.9
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhh--h------------------------HHHHHHHHHHHHhCCCCCc
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY--T------------------------VRNLKLRLDLLAKLRHPHL 541 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--~------------------------~~~~~~e~~~l~~l~Hpni 541 (766)
...||+|+||.||+|...+|+.||||+++..... . .....+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999878999999999654211 0 1122459999999988877
Q ss_pred ccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCcccCCCC
Q 004232 542 VCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFL-HTGVIPGFFNNRVK 620 (766)
Q Consensus 542 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrdlk 620 (766)
.....+... ..++||||++++++.....+. ..++......++.+++.+|.|+ |+. +|+|||||
T Consensus 82 ~~p~~~~~~----------~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlk 145 (190)
T cd05147 82 PCPEPILLK----------SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLS 145 (190)
T ss_pred CCCcEEEec----------CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 443322211 238999999998876543222 2478888899999999999999 565 89999999
Q ss_pred CCceEEcCCCcEEEecCCCCccc
Q 004232 621 TNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 621 ~~NILld~~~~~kl~DFGla~~~ 643 (766)
|+||+++ ++.++++|||+|...
T Consensus 146 P~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 146 EYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHEEEE-CCcEEEEEccccccC
Confidence 9999998 478999999998643
No 417
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.81 E-value=8.7e-20 Score=178.08 Aligned_cols=164 Identities=20% Similarity=0.161 Sum_probs=112.1
Q ss_pred CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccccc
Q 004232 572 GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGG 651 (766)
Q Consensus 572 GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 651 (766)
|+|.++++... ..++|.++..++.|++.||+|||+. + ||+||+++.++.+|+ ||++.........++
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~ 67 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVD 67 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeeccccCCCc
Confidence 78999997542 3589999999999999999999986 2 999999999999999 999876543322221
Q ss_pred ---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHH---HHH
Q 004232 652 ---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESL---SIV 725 (766)
Q Consensus 652 ---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~ 725 (766)
..++......++.++|||||||++|||+||+.|+...... ......+.... .. .++.. ....... ..+
T Consensus 68 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-~~~~~~~~~~~--~~-~~~~~--~~~~~~~~~~~~~ 141 (176)
T smart00750 68 PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-SAILEILLNGM--PA-DDPRD--RSNLESVSAARSF 141 (176)
T ss_pred ccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-cHHHHHHHHHh--cc-CCccc--cccHHHHHhhhhH
Confidence 1122122234567899999999999999999998643211 11111111100 00 00100 0011111 248
Q ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 726 ISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 726 ~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.+++.+||+.+|.+||++.|+++.+....
T Consensus 142 ~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 142 ADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 89999999999999999999999987654
No 418
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.81 E-value=7.3e-20 Score=189.05 Aligned_cols=145 Identities=23% Similarity=0.390 Sum_probs=122.4
Q ss_pred HHHHhcCCCcCCceecCCceeEEEEEec----CCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCC
Q 004232 478 LKEATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGG 552 (766)
Q Consensus 478 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~ 552 (766)
+....+.|...++||+|.|++||++... ....||+|.+..... ..++..|+++|..+. |.||+++.+++...+
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4444567888999999999999999742 467899999865432 356889999999995 899999998776553
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-Cc
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RI 631 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~ 631 (766)
...+|+||++.-+.+++... ++..+...+...+..||+|+|+. +|||||+||+|+|-+.. +.
T Consensus 109 --------~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~r 171 (418)
T KOG1167|consen 109 --------QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQR 171 (418)
T ss_pred --------eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCC
Confidence 78999999999999998764 56788888999999999999998 99999999999999854 56
Q ss_pred EEEecCCCCc
Q 004232 632 AKLSDYGLSI 641 (766)
Q Consensus 632 ~kl~DFGla~ 641 (766)
-.|.|||+|.
T Consensus 172 g~LvDFgLA~ 181 (418)
T KOG1167|consen 172 GVLVDFGLAQ 181 (418)
T ss_pred ceEEechhHH
Confidence 7899999986
No 419
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.81 E-value=8.6e-19 Score=217.14 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=164.3
Q ss_pred CCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCccc
Q 004232 107 IDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF 186 (766)
Q Consensus 107 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 186 (766)
...+|..+ .+.+|+.|+|.+|.+. .+|..+..+++|++|+|++|...+.+| .+..+++|++|+|++|.....+|..+
T Consensus 601 l~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si 677 (1153)
T PLN03210 601 LRCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSI 677 (1153)
T ss_pred CCCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhh
Confidence 34455554 4566777777777663 456666677777777777665444555 36667777777777766666677777
Q ss_pred CCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCC-----------
Q 004232 187 DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPK----------- 255 (766)
Q Consensus 187 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~----------- 255 (766)
+++++|+.|++++|...+.+|..+ ++++|+.|+|++|...+.+|.+ .++|++|++++|.+...++.
T Consensus 678 ~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l 754 (1153)
T PLN03210 678 QYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIEEFPSNLRLENLDELIL 754 (1153)
T ss_pred hccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc--cCCcCeeecCCCccccccccccccccccccc
Confidence 777777777777765445566554 5666777777666544444432 24556666666654321110
Q ss_pred ---------------------CCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEee
Q 004232 256 ---------------------LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLA 314 (766)
Q Consensus 256 ---------------------~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~ 314 (766)
.+.+|+.|++++|...+.+|..++++++|+.|++++|..-+.+|..+ ++++|+.|+|+
T Consensus 755 ~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls 833 (1153)
T PLN03210 755 CEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLS 833 (1153)
T ss_pred cccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECC
Confidence 12356777888887777788888888888888888765434444443 67888888888
Q ss_pred cCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCC-CcCC
Q 004232 315 SNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG-NCLS 367 (766)
Q Consensus 315 ~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~-N~l~ 367 (766)
+|.....+|.. ..+|+.|+|++|.++ .+|.++..+++|+.|++.+ |.+.
T Consensus 834 ~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~ 883 (1153)
T PLN03210 834 GCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ 883 (1153)
T ss_pred CCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC
Confidence 87665556643 356888888888887 6788888888888888887 4444
No 420
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=5.8e-19 Score=174.39 Aligned_cols=138 Identities=16% Similarity=0.202 Sum_probs=108.8
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhh--------------------------hHHHHHHHHHHHHhCCCCCc
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY--------------------------TVRNLKLRLDLLAKLRHPHL 541 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~--------------------------~~~~~~~e~~~l~~l~Hpni 541 (766)
...||+|+||.||+|+..+|+.||||.++..... ....+++|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999778999999998754210 01234678999999999988
Q ss_pred ccccceeecCCCCCCcCcceEEEEEEccCCCChhhh-hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCC
Q 004232 542 VCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTH-ISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNNRV 619 (766)
Q Consensus 542 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrdl 619 (766)
.....+... ..++||||++++++... +.+ ..++......++.+++.++.|+|+ . +|+||||
T Consensus 82 ~~p~~~~~~----------~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDl 144 (190)
T cd05145 82 PVPEPILLK----------KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDL 144 (190)
T ss_pred CCceEEEec----------CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCC
Confidence 554443322 23899999999865443 332 236677888999999999999999 6 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCccc
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~ 643 (766)
||+||+++ ++.++|+|||++...
T Consensus 145 kP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 145 SEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred ChhhEEEE-CCCEEEEEcccceec
Confidence 99999999 789999999998654
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.80 E-value=2.8e-19 Score=194.40 Aligned_cols=208 Identities=20% Similarity=0.317 Sum_probs=149.7
Q ss_pred HHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 004232 533 LAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (766)
Q Consensus 533 l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 612 (766)
|+.+.|.|+.+++|.|.++. ..+.|.+||+.|+|.+.+.... ..++|..+..++.+|+.||+|+|...
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--------~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s~-- 68 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--------EMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNSP-- 68 (484)
T ss_pred CcccchhhhhhheeeEecCC--------ceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcCc--
Confidence 45689999999999999873 6899999999999999997643 45899999999999999999999873
Q ss_pred CcccCCCCCCceEEcCCCcEEEecCCCCcccccccccc----------cCCCCCCcc-------cCCCCCCCEeehhHHH
Q 004232 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVG----------GKQEDPNSW-------EMTKLEDDVFSFGFML 675 (766)
Q Consensus 613 ~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~----------~~~~~~~~~-------~~~~~~~DV~SfGvil 675 (766)
...|+.++++|+++|..+.+|++|||+.....+..... ...++.... ...+.++||||||+++
T Consensus 69 i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 69 IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 33999999999999999999999999986553210000 001110000 1245578999999999
Q ss_pred HHHhcCCCccccCccchH-HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 676 LESVAGPSVAARKGQFLQ-EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 676 ~ElltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
+|+++.+.||+....... .++...... .....+.|.+.... +....+..++.+||..+|.+||++++|-..+..+.
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKK-GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHh-cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 999999999985432211 121111111 12222333322111 22235888999999999999999999998888765
Q ss_pred h
Q 004232 755 Q 755 (766)
Q Consensus 755 ~ 755 (766)
.
T Consensus 226 ~ 226 (484)
T KOG1023|consen 226 K 226 (484)
T ss_pred c
Confidence 4
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=3.1e-19 Score=207.23 Aligned_cols=226 Identities=26% Similarity=0.391 Sum_probs=183.3
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|+.|+|++|.++ .+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|++|.+. .+|..+. ++|+.|+|
T Consensus 199 ~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 199 EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 46899999999997 5676554 58999999999997 5676664 47999999999998 6777664 58999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCccc
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQ 277 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~ 277 (766)
++|+|+ .+|..+. ++|+.|+|++|+|++.++.+. ++|+.|++++|+++...+.++.+|+.|++++|.+++ +|..
T Consensus 270 s~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~ 343 (754)
T PRK15370 270 FHNKIS-CLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPAS 343 (754)
T ss_pred cCCccC-ccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCccccCCccccccceeccccCCcccc-CChh
Confidence 999998 5787664 589999999999997544343 478999999999987655577889999999999986 6766
Q ss_pred ccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCC----CCC
Q 004232 278 YGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCL----SNE 353 (766)
Q Consensus 278 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~----~~~ 353 (766)
+. ++|+.|++++|+|+.+|. .+ .++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .+|..+ +..
T Consensus 344 l~--~sL~~L~Ls~N~L~~LP~-~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~ 414 (754)
T PRK15370 344 LP--PELQVLDVSKNQITVLPE-TL--PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEG 414 (754)
T ss_pred hc--CcccEEECCCCCCCcCCh-hh--cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcC
Confidence 53 799999999999987553 44 368999999999999 5676654 36999999999998 556543 445
Q ss_pred CCCceeecCCCcCC
Q 004232 354 SDKRVVKFRGNCLS 367 (766)
Q Consensus 354 ~~l~~l~l~~N~l~ 367 (766)
+.+..+++.+|.++
T Consensus 415 ~~l~~L~L~~Npls 428 (754)
T PRK15370 415 PQPTRIIVEYNPFS 428 (754)
T ss_pred CCccEEEeeCCCcc
Confidence 77889999999886
No 423
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.79 E-value=1.2e-21 Score=199.59 Aligned_cols=258 Identities=22% Similarity=0.257 Sum_probs=149.7
Q ss_pred ccccCCCCCCEEecccccccccCCccccCCCCCCEEeccc-ccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCC
Q 004232 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSS-NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLP 190 (766)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 190 (766)
.+|+.+++|+.|||++|+|+.+-|++|.+|.+|..|-+.+ |+|+...-..|++|..|+.|.+.-|++.-...+.|..|+
T Consensus 85 ~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~ 164 (498)
T KOG4237|consen 85 GAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLP 164 (498)
T ss_pred hhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhh
Confidence 3455555555555555555555555555555544443333 444433334445555555555555555544444555555
Q ss_pred CCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCC--CCC-----------CCCCCCCCCEEECCCCCCCCCCCC-C
Q 004232 191 SLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISG--SLP-----------DLSSLGSLNVLNLSDNKLDSNLPK-L 256 (766)
Q Consensus 191 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p-----------~~~~l~~L~~L~ls~N~l~~~~p~-~ 256 (766)
+|..|.+.+|.+...--..|..+..++.+.+..|.+-- .+| .+++.....-..+.++++...-+. .
T Consensus 165 ~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf 244 (498)
T KOG4237|consen 165 SLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKF 244 (498)
T ss_pred hcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhh
Confidence 55555555555442222244445555555554444210 000 011111111111111111110000 0
Q ss_pred C---CCCcEEEccCCcCccCCc-ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCc
Q 004232 257 P---RGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKL 332 (766)
Q Consensus 257 ~---~~l~~l~ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L 332 (766)
. ..+..-..+.....+..| ..|..+++|+.|+|++|+++++-+.+|..+..++.|.|..|+|...-...|..++.|
T Consensus 245 ~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L 324 (498)
T KOG4237|consen 245 LCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGL 324 (498)
T ss_pred hhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccc
Confidence 0 011111122222333333 468999999999999999999999999999999999999999986666788999999
Q ss_pred cEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCC
Q 004232 333 VFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 333 ~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (766)
+.|+|.+|+|+..-|..|..+..+..+++-.|.+..+
T Consensus 325 ~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 325 KTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred eeeeecCCeeEEEecccccccceeeeeehccCcccCc
Confidence 9999999999999999999999999999999987653
No 424
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=3.2e-19 Score=177.44 Aligned_cols=177 Identities=10% Similarity=0.116 Sum_probs=127.8
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhH---HH------HHHHHHHHHhCCCCCcccccceeecCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTV---RN------LKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~---~~------~~~e~~~l~~l~Hpniv~l~g~~~~~~ 552 (766)
.++|...+++|.|+||.||.... ++..+|||.+........ +. +++|+..+.+++||+|.....++....
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 47799999999999999999765 567899999975432221 22 688999999999999999988866542
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcE
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
..........++||||++|.+|.++.. ++. ....+++.++..+|+. +++|||+||+||+++.++ +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-E
Confidence 110000124799999999999987632 221 2455889999999997 899999999999999888 9
Q ss_pred EEecCCCCcccccccccccCCCCCCcccCCCCCCCEeehhHHHHHH
Q 004232 633 KLSDYGLSIVSEDINSVGGKQEDPNSWEMTKLEDDVFSFGFMLLES 678 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~DV~SfGvil~El 678 (766)
++.|||............ .......+..++|+||||+.+.-.
T Consensus 174 ~liDfg~~~~~~e~~a~d----~~vler~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAKD----RIDLERHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred EEEECCCcccccchhhHH----HHHHHhHhcccccccceeEeehHH
Confidence 999999875442211000 000011233689999999976553
No 425
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.78 E-value=3.9e-18 Score=211.33 Aligned_cols=249 Identities=22% Similarity=0.272 Sum_probs=178.6
Q ss_pred cccccccCCC-CCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccC
Q 004232 109 SFVTTLARLT-SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFD 187 (766)
Q Consensus 109 ~~~~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 187 (766)
.+|..+..++ +|+.|++.++.+ ..+|..| .+.+|+.|+|++|++. .+|..+..+++|+.|+|++|.....+|. ++
T Consensus 579 ~lp~~~~~lp~~Lr~L~~~~~~l-~~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls 654 (1153)
T PLN03210 579 HLPEGFDYLPPKLRLLRWDKYPL-RCMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LS 654 (1153)
T ss_pred ecCcchhhcCcccEEEEecCCCC-CCCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cc
Confidence 3566666664 588888888876 5677777 5789999999999986 6888899999999999998876667775 88
Q ss_pred CCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccC
Q 004232 188 SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSN 267 (766)
Q Consensus 188 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~ 267 (766)
.+++|+.|+|++|.....+|..+.++++|+.|++++|...+.+|...++++|+.|++++|...+.+|..+.++..|++++
T Consensus 655 ~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~ 734 (1153)
T PLN03210 655 MATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPDISTNISWLDLDE 734 (1153)
T ss_pred cCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCccccccccCCcCeeecCC
Confidence 99999999999998778999999999999999999976666677655899999999999988888888888999999999
Q ss_pred CcCccCCcccccCCCCCCEEEccCCc-------CCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCC
Q 004232 268 NSFSGEIPKQYGQLNQLQQLDMSFNA-------LRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN 340 (766)
Q Consensus 268 N~l~~~~p~~~~~l~~L~~L~ls~N~-------l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N 340 (766)
|.+. .+|..+ .+++|+.|+++++. +...++..+...++|+.|+|++|...+.+|..++.+++|+.|++++|
T Consensus 735 n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C 812 (1153)
T PLN03210 735 TAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENC 812 (1153)
T ss_pred Cccc-cccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCC
Confidence 9986 466544 34555555554422 11112212222345555555555555555555555555555555554
Q ss_pred ccccCCCCCCCCCCCCceeecCCC
Q 004232 341 KLTGGLPSCLSNESDKRVVKFRGN 364 (766)
Q Consensus 341 ~l~g~~p~~~~~~~~l~~l~l~~N 364 (766)
...+.+|..+ ++++|+.|++++|
T Consensus 813 ~~L~~LP~~~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 813 INLETLPTGI-NLESLESLDLSGC 835 (1153)
T ss_pred CCcCeeCCCC-CccccCEEECCCC
Confidence 3333444443 3445555555543
No 426
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.77 E-value=4.2e-21 Score=214.15 Aligned_cols=260 Identities=27% Similarity=0.377 Sum_probs=172.4
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCE----------
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQT---------- 170 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~---------- 170 (766)
++.|+ +...|.+++++.+|++|+|.+|.+ ..+|..+..+.+|++||+|+|.+. .+|..+..++.+..
T Consensus 75 ~s~n~-i~~vp~s~~~~~~l~~lnL~~n~l-~~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~ 151 (1081)
T KOG0618|consen 75 LSRNY-IRSVPSSCSNMRNLQYLNLKNNRL-QSLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQ 151 (1081)
T ss_pred cchhh-HhhCchhhhhhhcchhheeccchh-hcCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhh
Confidence 34444 345678999999999999999887 578999999999999999999874 55544433332222
Q ss_pred -------------------------------EEccCCcCCCCCCccc---------------------------------
Q 004232 171 -------------------------------LILDDNFFNNTIPNWF--------------------------------- 186 (766)
Q Consensus 171 -------------------------------L~L~~N~l~~~~p~~~--------------------------------- 186 (766)
|+|.+|.+....-..+
T Consensus 152 ~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l 231 (1081)
T KOG0618|consen 152 RLGQTSIKKLDLRLNVLGGSFLIDIYNLTHQLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPL 231 (1081)
T ss_pred hhccccchhhhhhhhhcccchhcchhhhheeeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcc
Confidence 4444443320000000
Q ss_pred ------CCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCC-----------------------CCCCCCCCC
Q 004232 187 ------DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISG-----------------------SLPDLSSLG 237 (766)
Q Consensus 187 ------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----------------------~~p~~~~l~ 237 (766)
..-.+|+++++++|+++ .+|++++.+.+|+.|++.+|+|+. .+|....++
T Consensus 232 ~~~~~~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~ 310 (1081)
T KOG0618|consen 232 TTLDVHPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLK 310 (1081)
T ss_pred eeeccccccccceeeecchhhhh-cchHHHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccc
Confidence 00124666666666666 355777777777777777776642 333355688
Q ss_pred CCCEEECCCCCCCCCCCC---------------------CC-------CCCcEEEccCCcCccCCcccccCCCCCCEEEc
Q 004232 238 SLNVLNLSDNKLDSNLPK---------------------LP-------RGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDM 289 (766)
Q Consensus 238 ~L~~L~ls~N~l~~~~p~---------------------~~-------~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~l 289 (766)
+|++|+|..|+|...++. ++ ..|+.|++.+|.++...-..+.+..+|+.|+|
T Consensus 311 sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhL 390 (1081)
T KOG0618|consen 311 SLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHL 390 (1081)
T ss_pred eeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeee
Confidence 999999999998653321 11 13566788999998877777888899999999
Q ss_pred cCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCC----------------------CCCccEEeCcCCccccCCC
Q 004232 290 SFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNC----------------------GGKLVFFDISNNKLTGGLP 347 (766)
Q Consensus 290 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~----------------------~~~L~~L~ls~N~l~g~~p 347 (766)
++|+|...|...+.++..|+.|+||+|+|+ .+|+.+.. +++|+.+|+|.|+|+-..-
T Consensus 391 syNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l 469 (1081)
T KOG0618|consen 391 SYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTL 469 (1081)
T ss_pred cccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeechhhhhcCcceEEecccchhhhhhh
Confidence 999999999888999999999999999987 45555444 4555556666665542221
Q ss_pred CCCCCCCCCceeecCCCc
Q 004232 348 SCLSNESDKRVVKFRGNC 365 (766)
Q Consensus 348 ~~~~~~~~l~~l~l~~N~ 365 (766)
......++|+.|+++||.
T Consensus 470 ~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 470 PEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred hhhCCCcccceeeccCCc
Confidence 111122456666666654
No 427
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=5e-18 Score=168.63 Aligned_cols=140 Identities=16% Similarity=0.171 Sum_probs=106.5
Q ss_pred CcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-----CCCCcccccceeecCCCCCCcCcc
Q 004232 486 DMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-----RHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-----~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.-...||+|+||.||. .-.++.. +||++........+.+.+|+++++++ +||||++++|++.+..|.. .
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g----~ 78 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG----Y 78 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe----E
Confidence 3457899999999996 3234444 68888665444567899999999999 6799999999998864321 1
Q ss_pred eEEEEEEc--cCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCCCcccCCCCCCceEEcC----CCcEE
Q 004232 561 KVFLVYEF--MSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAV-QFLHTGVIPGFFNNRVKTNNILLNE----HRIAK 633 (766)
Q Consensus 561 ~~~lv~Ey--~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrdlk~~NILld~----~~~~k 633 (766)
.+.+|+|| +++|+|.+++.+.. ++.. ..++.++..++ +|||++ +|+||||||+|||++. ++.++
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEE
Confidence 24489999 66899999996531 4444 35577788777 999998 8999999999999974 34799
Q ss_pred EecCCCC
Q 004232 634 LSDYGLS 640 (766)
Q Consensus 634 l~DFGla 640 (766)
|+||+-+
T Consensus 150 LiDg~G~ 156 (210)
T PRK10345 150 VCDNIGE 156 (210)
T ss_pred EEECCCC
Confidence 9995443
No 428
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.74 E-value=8.2e-17 Score=172.13 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=174.6
Q ss_pred CCcCCceecCCceeEEEEEecCCceEEEEEccCChhh---hHHHHHHHHHHHHhCCCC-CcccccceeecCCCCCCcCcc
Q 004232 485 FDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY---TVRNLKLRLDLLAKLRHP-HLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~---~~~~~~~e~~~l~~l~Hp-niv~l~g~~~~~~~~~~~~~~ 560 (766)
|.....||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++..++....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-------- 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-------- 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC--------
Confidence 556678999999999999876 78899998765432 467899999999999988 7999999885442
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DFGl 639 (766)
..++++||+.++++.+++........+.......+..+++.++.|+|.. +++|||+||+||+++... .+|++|||.
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 72 SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 4799999999999997665432112477888899999999999999997 799999999999999888 799999999
Q ss_pred Ccccccccc-----------cccCC-CCCC--cc---cCCCCCCCEeehhHHHHHHhcCCCccccCccc--hHHHHhhhh
Q 004232 640 SIVSEDINS-----------VGGKQ-EDPN--SW---EMTKLEDDVFSFGFMLLESVAGPSVAARKGQF--LQEELDSLN 700 (766)
Q Consensus 640 a~~~~~~~~-----------~~~~~-~~~~--~~---~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~--~~~~~~~~~ 700 (766)
+........ .+... ..|. .. .......|+||+|++++++++|..|+...... .......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 864332211 00000 1111 11 24455779999999999999999996543320 111111111
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ..... ..............+.+++.+|+..+|..|.++.+....
T Consensus 229 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 229 ELP-TPSLA-SPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred hcC-Ccccc-cccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 00000 000000001112346788899999999999999887764
No 429
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=2.5e-17 Score=160.32 Aligned_cols=175 Identities=16% Similarity=0.140 Sum_probs=126.4
Q ss_pred CcCCceecCCceeEEEEEecCCceEEEEEccCChh----hhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcc
Q 004232 486 DMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK----YTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+...|++|+||+||.+.. ++..++.+.+..... ...+.+.+|+++|+++. |+++.+++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~------------ 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD------------ 71 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc------------
Confidence 3467899999999997765 677888777765432 12336889999999995 57888888751
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC-CCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV-KTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl-k~~NILld~~~~~kl~DFGl 639 (766)
..+++|||+.+.+|.+.+.. ....++.++++++.|+|+. +|+|||| ||+|||++.++.++|+|||+
T Consensus 72 ~~~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~ 138 (218)
T PRK12274 72 GRHLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQL 138 (218)
T ss_pred CEEEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCC
Confidence 35999999999998754321 1134677899999999998 8999999 79999999999999999999
Q ss_pred Cccccccccc----c-------------cCCC--CCCcccCCC----CCCCEeehhHHHHHHhcCCCccc
Q 004232 640 SIVSEDINSV----G-------------GKQE--DPNSWEMTK----LEDDVFSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 640 a~~~~~~~~~----~-------------~~~~--~~~~~~~~~----~~~DV~SfGvil~ElltG~~p~~ 686 (766)
+......... . +.++ .|....... ...++++-|.-+|.++|++.+..
T Consensus 139 A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 139 AVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred ceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 9754322110 0 0011 111111111 12478899999999999987754
No 430
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=6.9e-20 Score=166.37 Aligned_cols=162 Identities=33% Similarity=0.506 Sum_probs=141.4
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
.+.++++.+.|.|++|.++ .+|+.+..|.+|+.|++++|++. .+|.+++.|++|+.|+++-|++. .+|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3567778888999999996 56667999999999999999996 78999999999999999999988 789999999999
Q ss_pred CEEEccCccCC-CCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCc
Q 004232 193 TFLSMRNNKLA-GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFS 271 (766)
Q Consensus 193 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~ 271 (766)
++|||.+|++. ..+|..|..|+.|+.|+|+.|.+.-.+|+.+.|++|+.|.+.+|.+-
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll--------------------- 163 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL--------------------- 163 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh---------------------
Confidence 99999999986 46899999999999999999999988888999999999888887653
Q ss_pred cCCcccccCCCCCCEEEccCCcCCCCCc
Q 004232 272 GEIPKQYGQLNQLQQLDMSFNALRGMPP 299 (766)
Q Consensus 272 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~ 299 (766)
.+|.+++.+.+|++|.+.+|+++-+||
T Consensus 164 -~lpkeig~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 164 -SLPKEIGDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred -hCcHHHHHHHHHHHHhcccceeeecCh
Confidence 478888888888888888888877666
No 431
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=3.7e-19 Score=191.22 Aligned_cols=255 Identities=24% Similarity=0.276 Sum_probs=169.8
Q ss_pred cccccCCCCCCEEeccccccccc----CCccccCCCCCCEEecccccCcc------CCCccCCCCCCCCEEEccCCcCCC
Q 004232 111 VTTLARLTSLRVLSLVSLGIWGS----LPDKIHRLYSLEYLDLSSNFLFG------SVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 111 ~~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~L~~L~~L~Ls~N~l~~------~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
...+..+.+|+.|+++++.++.. ++..+...++|++|++++|.+.+ .++..+..+++|+.|+|++|.+.+
T Consensus 16 ~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 95 (319)
T cd00116 16 TELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGP 95 (319)
T ss_pred HHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCCh
Confidence 44566777799999999988443 56667788889999999888762 234567778899999999998887
Q ss_pred CCCcccCCCCC---CCEEEccCccCCC----CCCccccCC-CCCCEEEccCCccCCCCC-----CCCCCCCCCEEECCCC
Q 004232 181 TIPNWFDSLPS---LTFLSMRNNKLAG----PFPSSIQRI-STLSDLDLSKNAISGSLP-----DLSSLGSLNVLNLSDN 247 (766)
Q Consensus 181 ~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~Ls~N~l~~~~p-----~~~~l~~L~~L~ls~N 247 (766)
..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++... .+..+++|++|++++|
T Consensus 96 ~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n 175 (319)
T cd00116 96 DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN 175 (319)
T ss_pred hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC
Confidence 66666665555 9999999998873 233445666 888999999998885322 2556778889999988
Q ss_pred CCCCC----CCC-C--CCCCcEEEccCCcCccC----CcccccCCCCCCEEEccCCcCCCCCccccC-----CCCCCCeE
Q 004232 248 KLDSN----LPK-L--PRGLVMAFLSNNSFSGE----IPKQYGQLNQLQQLDMSFNALRGMPPPAIF-----SLPNISDL 311 (766)
Q Consensus 248 ~l~~~----~p~-~--~~~l~~l~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~-----~l~~L~~L 311 (766)
.+++. ++. + ...|+.+++++|.+++. ++..+..+++|+.|++++|.+++.....+. ..+.|+.|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L 255 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTL 255 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEE
Confidence 88742 111 1 13677777777777643 334455667788888888777653222221 13677777
Q ss_pred EeecCcCc----ccCCccCCCCCCccEEeCcCCccccC----CCCCCCCC-CCCceeecCCCc
Q 004232 312 NLASNKFS----GSLPKNLNCGGKLVFFDISNNKLTGG----LPSCLSNE-SDKRVVKFRGNC 365 (766)
Q Consensus 312 ~L~~N~l~----g~~p~~~~~~~~L~~L~ls~N~l~g~----~p~~~~~~-~~l~~l~l~~N~ 365 (766)
++++|.++ ..+...+....+|+++|+++|.++.. +...+... +.++.+++.+|.
T Consensus 256 ~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 256 SLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred EccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 77777775 12333444456777777777777643 22222222 456666666554
No 432
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.70 E-value=5.5e-19 Score=197.39 Aligned_cols=259 Identities=28% Similarity=0.372 Sum_probs=193.3
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
+..|++....-+...+.-+|+.|+|++|.+ +..|..+..+.+|+.|+++.|.+. .+|.++.++.+|++|+|.+|.+.
T Consensus 28 ~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~-~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~- 104 (1081)
T KOG0618|consen 28 LRRNSLLSRPLEFVEKRVKLKSLDLSNNQI-SSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ- 104 (1081)
T ss_pred ccccccccCchHHhhheeeeEEeecccccc-ccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-
Confidence 344444433223444455699999998887 678888999999999999999886 67888999999999999998877
Q ss_pred CCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCC-------------------ccCCCCC-CCCCCCCCC
Q 004232 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKN-------------------AISGSLP-DLSSLGSLN 240 (766)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-------------------~l~~~~p-~~~~l~~L~ 240 (766)
.+|..+..+.+|++|+++.|++. .+|..+..++.+..+..++| .+.+.++ ++..++.
T Consensus 105 ~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~-- 181 (1081)
T KOG0618|consen 105 SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH-- 181 (1081)
T ss_pred cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--
Confidence 78888999999999999999886 67777777776666666666 2222222 1333333
Q ss_pred EEECCCCCCCCC----CCCC----------------CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCcc
Q 004232 241 VLNLSDNKLDSN----LPKL----------------PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPP 300 (766)
Q Consensus 241 ~L~ls~N~l~~~----~p~~----------------~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 300 (766)
.|+|.+|.+.-. .+.+ ...++.++.++|.++...+. ..-.+|+++|+|+|++++.| .
T Consensus 182 ~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~lp-~ 258 (1081)
T KOG0618|consen 182 QLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSNLP-E 258 (1081)
T ss_pred eeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccc--cccccceeeecchhhhhcch-H
Confidence 588998887611 1110 12456666777777632221 22357899999999999988 8
Q ss_pred ccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCCc
Q 004232 301 AIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNV 370 (766)
Q Consensus 301 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 370 (766)
+++.+.+|+.|+..+|+|+ .+|..+...++|+.|++.+|.+. -+|..+...+.+++|++..|.+...+
T Consensus 259 wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp 326 (1081)
T KOG0618|consen 259 WIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLP 326 (1081)
T ss_pred HHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccc
Confidence 8999999999999999996 78888888889999999999988 67777888888999999999887544
No 433
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.69 E-value=7.3e-16 Score=165.44 Aligned_cols=251 Identities=20% Similarity=0.255 Sum_probs=167.4
Q ss_pred CCCcCCceecCCceeEEEEEecC--CceEEEEEccCChhhhHHHHHHHHHHHHhCCC----CCcccccceee-cCCCCCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLEN--GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRH----PHLVCLLGHCI-DGGGRDD 556 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~--g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~H----pniv~l~g~~~-~~~~~~~ 556 (766)
.|.+.+.||+|+||.||++.... ...+|+|.-..........+..|+.++..+.+ +++..+++... ..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~----- 93 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE----- 93 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC-----
Confidence 78899999999999999998554 34788887765433322367888999888873 47777766553 22
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-----Cc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-----RI 631 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-----~~ 631 (766)
..-++||+.+ +.+|.++..... ...++..+.++|+.|+..+|+++|+. +++||||||.|+++... ..
T Consensus 94 ---~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~ 165 (322)
T KOG1164|consen 94 ---DFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRT 165 (322)
T ss_pred ---ceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccce
Confidence 2568998865 558988665443 45588899999999999999999997 99999999999999854 46
Q ss_pred EEEecCCCCccccccccccc--CCC---------CC-------CcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-h
Q 004232 632 AKLSDYGLSIVSEDINSVGG--KQE---------DP-------NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-L 692 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~~--~~~---------~~-------~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~ 692 (766)
+.+.|||+++........+. ..+ +. ......+.+.|+||++-++.|+..|..|+...... .
T Consensus 166 ~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~ 245 (322)
T KOG1164|consen 166 LYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL 245 (322)
T ss_pred EEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch
Confidence 89999999973211000000 000 00 01122334679999999999999999887533221 1
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
...+...... ....+ .......+ +.++...+-..+-.++|....+...++.....
T Consensus 246 ~~~~~~~~~~----~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 246 KSKFEKDPRK----LLTDR--FGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHHHHHhhh----hcccc--ccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 1111111111 11111 11111222 44555555668999999999999998877654
No 434
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.3e-16 Score=162.52 Aligned_cols=141 Identities=13% Similarity=0.141 Sum_probs=108.0
Q ss_pred CCCcCCceecCCceeEEEEE--ecCCceEEEEEccCChhh------------------------hHHHHHHHHHHHHhCC
Q 004232 484 NFDMSAIMGEGSYGKLYKGR--LENGTSVAIRCLPSSKKY------------------------TVRNLKLRLDLLAKLR 537 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~--~~~g~~vAvK~l~~~~~~------------------------~~~~~~~e~~~l~~l~ 537 (766)
.|++.+.||+|+||.||+|. ..+|+.||||.++..... ....+.+|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 568999999998643210 1134678999999997
Q ss_pred CCC--cccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-c
Q 004232 538 HPH--LVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPG-F 614 (766)
Q Consensus 538 Hpn--iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-i 614 (766)
|.. +.+++++ . ..++||||++++++........ .........++.+++.+++|||+. + |
T Consensus 109 ~~~i~~p~~~~~---~---------~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---g~i 170 (237)
T smart00090 109 EAGVPVPKPIAW---R---------RNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKE---GEL 170 (237)
T ss_pred hcCCCCCeeeEe---c---------CceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhc---CCE
Confidence 633 2333322 1 2489999999999876543221 244555678899999999999997 7 9
Q ss_pred ccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 615 FNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 615 vHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|||+||+||+++ ++.++++|||.+...
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9999999999999 889999999997543
No 435
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=2.2e-16 Score=157.16 Aligned_cols=143 Identities=13% Similarity=0.149 Sum_probs=108.5
Q ss_pred HHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChh----------------------hhHHHHHHHHHHHH
Q 004232 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK----------------------YTVRNLKLRLDLLA 534 (766)
Q Consensus 477 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----------------------~~~~~~~~e~~~l~ 534 (766)
++...-..|.+.+.||+|+||.||+|...+|+.||||++..... .....+.+|..++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 34333334777899999999999999988899999998654220 01123677888999
Q ss_pred hCCCCC--cccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 004232 535 KLRHPH--LVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (766)
Q Consensus 535 ~l~Hpn--iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 612 (766)
++.|++ +...++. ...++||||+++++|...... .....++.+++.++.++|+.
T Consensus 89 ~l~~~~i~v~~~~~~------------~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~--- 144 (198)
T cd05144 89 ALYEEGFPVPKPIDW------------NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH--- 144 (198)
T ss_pred HHHHcCCCCCceeec------------CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---
Confidence 998874 3333321 135899999999999765421 22456788999999999996
Q ss_pred CcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 613 ~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||||||+||++++++.+||+|||++...
T Consensus 145 gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 145 GIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 8999999999999999999999999998543
No 436
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=2.2e-16 Score=159.02 Aligned_cols=134 Identities=18% Similarity=0.335 Sum_probs=110.5
Q ss_pred CceecCCceeEEEEEecCCceEEEEEccCCh--------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.||+|++|.||+|+. .|..|+||...... ......+.+|++++..++|+++.....++.+.+
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-------- 72 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-------- 72 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC--------
Confidence 5789999999999987 67789999765321 112346788999999999999887777766543
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++++|.+++... .+ .+..++.+++.+|.++|+. +++|||++|.||+++ ++.++|+|||.+
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a 141 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLA 141 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcc
Confidence 468999999999999988643 12 7788999999999999997 899999999999999 788999999987
Q ss_pred cc
Q 004232 641 IV 642 (766)
Q Consensus 641 ~~ 642 (766)
..
T Consensus 142 ~~ 143 (211)
T PRK14879 142 EF 143 (211)
T ss_pred cC
Confidence 54
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=2.4e-16 Score=180.65 Aligned_cols=138 Identities=17% Similarity=0.278 Sum_probs=108.7
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCC-h------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS-K------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~-~------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
..|...+.||+|+||+||+|.+.....++.+++... . ....+++.+|++++++++|++++....++.+..
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--- 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE--- 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC---
Confidence 345567899999999999998765443332222221 1 122456889999999999999998877776543
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
..++||||+++++|.+++. .+..++.+++++|.|||+. +++|||+||+|||+ +++.++|+
T Consensus 410 -----~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~li 469 (535)
T PRK09605 410 -----EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLI 469 (535)
T ss_pred -----CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEE
Confidence 4689999999999998774 3467889999999999997 89999999999999 57799999
Q ss_pred cCCCCccc
Q 004232 636 DYGLSIVS 643 (766)
Q Consensus 636 DFGla~~~ 643 (766)
|||+++..
T Consensus 470 DFGla~~~ 477 (535)
T PRK09605 470 DFGLGKYS 477 (535)
T ss_pred eCcccccC
Confidence 99998653
No 438
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=5.2e-16 Score=154.72 Aligned_cols=130 Identities=19% Similarity=0.304 Sum_probs=104.1
Q ss_pred ceecCCceeEEEEEecCCceEEEEEccCCh--------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 490 IMGEGSYGKLYKGRLENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.||+|+||.||+|.+ +|..|++|...... ....+++.+|++++..++|+++.....++.... .
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~--------~ 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD--------N 71 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC--------C
Confidence 489999999999985 57789999854321 112356788999999999987665555555432 4
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++++|.+.+.... ..++.+++.+|+++|+. +++|||++|.||+++ ++.+++.|||++.
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~~----------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~ 137 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEGN----------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGK 137 (199)
T ss_pred CEEEEEEECCccHHHHHhhcH----------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence 589999999999998775321 07888999999999997 899999999999999 7899999999985
Q ss_pred c
Q 004232 642 V 642 (766)
Q Consensus 642 ~ 642 (766)
.
T Consensus 138 ~ 138 (199)
T TIGR03724 138 Y 138 (199)
T ss_pred C
Confidence 4
No 439
>PLN03150 hypothetical protein; Provisional
Probab=99.65 E-value=7e-16 Score=178.72 Aligned_cols=159 Identities=26% Similarity=0.407 Sum_probs=122.8
Q ss_pred CCChHHHHHHHHHHHcCCCCCCCCCccCCCCCCCCCCCCCccceEecCCCEEEEEeCCCCCCCCCCCCccccccccCCCc
Q 004232 25 QLQSSQTQVLLQLRKHLEYPKQLEIWINHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNVGNFDGFASANASLSEN 104 (766)
Q Consensus 25 ~~~~~~~~aLl~~k~~~~~~~~l~~W~~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~l~~n 104 (766)
...+.|..||++||+++.++.. .+|+ .+||......|.||.|.....
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~-~~W~---g~~C~p~~~~w~Gv~C~~~~~----------------------------- 414 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR-FGWN---GDPCVPQQHPWSGADCQFDST----------------------------- 414 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc-CCCC---CCCCCCcccccccceeeccCC-----------------------------
Confidence 3456799999999999977643 4795 367743223467899952110
Q ss_pred ccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCc
Q 004232 105 FSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPN 184 (766)
Q Consensus 105 ~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 184 (766)
.....++.|+|++|.+.|.+|..|++|++|+.|+|++|.+.|.+|..++.+++|+.|+|++|+++|.+|.
T Consensus 415 ----------~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~ 484 (623)
T PLN03150 415 ----------KGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484 (623)
T ss_pred ----------CCceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCch
Confidence 0011256788889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCEEEccCccCCCCCCccccCC-CCCCEEEccCCcc
Q 004232 185 WFDSLPSLTFLSMRNNKLAGPFPSSIQRI-STLSDLDLSKNAI 226 (766)
Q Consensus 185 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l 226 (766)
.+++|++|++|+|++|+++|.+|..++.+ .++..+++++|..
T Consensus 485 ~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 485 SLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred HHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCcc
Confidence 99999999999999999999998887653 3455666666543
No 440
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.65 E-value=1.4e-18 Score=177.37 Aligned_cols=248 Identities=22% Similarity=0.228 Sum_probs=197.3
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccC-CcCCCCCCcccCCCCCCCEEEccC
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDD-NFFNNTIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~ 199 (766)
..++|..|+|+.+.|.+|+.+++|+.||||+|+|+.+-|++|.+|.+|.+|.+.+ |+|+....+.|++|.+|+.|.+.-
T Consensus 70 veirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNa 149 (498)
T KOG4237|consen 70 VEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNA 149 (498)
T ss_pred eEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcCh
Confidence 5689999999999999999999999999999999999999999999999987766 999987778999999999999999
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCC--CCCCCC----------CC---CcEE
Q 004232 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDS--NLPKLP----------RG---LVMA 263 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~--~~p~~~----------~~---l~~l 263 (766)
|++.-...+.|..|++|..|.+..|.+....- .+..+.+++.+.+..|.+-. .+|.+. .. ....
T Consensus 150 n~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~ 229 (498)
T KOG4237|consen 150 NHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPY 229 (498)
T ss_pred hhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchH
Confidence 99998888899999999999999999975443 47889999999999998532 222211 11 1112
Q ss_pred EccCCcCccCCcccccCC-CCCC-EEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCc
Q 004232 264 FLSNNSFSGEIPKQYGQL-NQLQ-QLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNK 341 (766)
Q Consensus 264 ~ls~N~l~~~~p~~~~~l-~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~ 341 (766)
.+.++++...-+..|... ..+. .+....+...-.|...|..+++|+.|+|++|++++.-+.+|.....++.|.|..|+
T Consensus 230 rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~ 309 (498)
T KOG4237|consen 230 RLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNK 309 (498)
T ss_pred HHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcch
Confidence 244444544444444322 1221 22333344445555678999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 342 LTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 342 l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+.-.--..+.+++.|++|++.+|+++.
T Consensus 310 l~~v~~~~f~~ls~L~tL~L~~N~it~ 336 (498)
T KOG4237|consen 310 LEFVSSGMFQGLSGLKTLSLYDNQITT 336 (498)
T ss_pred HHHHHHHhhhccccceeeeecCCeeEE
Confidence 986555667889999999999999874
No 441
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.65 E-value=2.3e-18 Score=156.54 Aligned_cols=166 Identities=31% Similarity=0.468 Sum_probs=105.7
Q ss_pred ccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCC
Q 004232 138 IHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLS 217 (766)
Q Consensus 138 ~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 217 (766)
+.++.+.+.|.||+|+++ .+|+.+..|.+|+.|++++|++. .+|..++.|++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445666777777777775 56667777777777777777766 55666666666666666666665 5666666666666
Q ss_pred EEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCC
Q 004232 218 DLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGM 297 (766)
Q Consensus 218 ~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 297 (766)
.|||.+|+++.. .+|..|-.+..|+-|+|+.|.|.-+
T Consensus 106 vldltynnl~e~-------------------------------------------~lpgnff~m~tlralyl~dndfe~l 142 (264)
T KOG0617|consen 106 VLDLTYNNLNEN-------------------------------------------SLPGNFFYMTTLRALYLGDNDFEIL 142 (264)
T ss_pred hhhccccccccc-------------------------------------------cCCcchhHHHHHHHHHhcCCCcccC
Confidence 666666655421 2344444455555566666666554
Q ss_pred CccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCC
Q 004232 298 PPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN 352 (766)
Q Consensus 298 ~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~ 352 (766)
|| .++++++|+.|.+..|.+- ++|..++.++.|+.|.+.+|+++ .+|..+++
T Consensus 143 p~-dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 143 PP-DVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred Ch-hhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 44 4566667777777776665 66777777777777777777777 45555443
No 442
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.64 E-value=8.2e-16 Score=157.14 Aligned_cols=197 Identities=17% Similarity=0.251 Sum_probs=124.8
Q ss_pred CCCCCcccccceeecCC-----CCC--------------CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHH
Q 004232 536 LRHPHLVCLLGHCIDGG-----GRD--------------DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVL 596 (766)
Q Consensus 536 l~Hpniv~l~g~~~~~~-----~~~--------------~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~ 596 (766)
.+|||||++.++|+++- +.. ......+|+||.-.+. +|++++..+. .+...+.-+.
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~l 347 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVIL 347 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHH
Confidence 47999999999887621 000 0012457899987776 8999987543 3445556678
Q ss_pred HHHHHHHHHHhcCCCCCcccCCCCCCceEEc--CCC--cEEEecCCCCcccccc----------cccccCC--CCCC-cc
Q 004232 597 IGVAKAVQFLHTGVIPGFFNNRVKTNNILLN--EHR--IAKLSDYGLSIVSEDI----------NSVGGKQ--EDPN-SW 659 (766)
Q Consensus 597 ~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~--~~kl~DFGla~~~~~~----------~~~~~~~--~~~~-~~ 659 (766)
.|+.+|+.|||.+ +|.|||+|++|||+. +|. ...|+|||++...+.. ...++.. ..|. ..
T Consensus 348 aQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 8999999999998 899999999999984 443 5789999987432210 0111110 0010 00
Q ss_pred cCCC-------CCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHh
Q 004232 660 EMTK-------LEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKC 732 (766)
Q Consensus 660 ~~~~-------~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C 732 (766)
..+. .|+|.|+.|.+-||+++..-||-..+....+... ..+.....+.+ .....+.+++-..
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~--Yqe~qLPalp~---------~vpp~~rqlV~~l 493 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT--YQESQLPALPS---------RVPPVARQLVFDL 493 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh--hhhhhCCCCcc---------cCChHHHHHHHHH
Confidence 1111 3789999999999999999998654432222111 11111222211 1122356777788
Q ss_pred ccCCCCCCCCHHHHHHHHH
Q 004232 733 ICSESWSRPSFEDILWNLQ 751 (766)
Q Consensus 733 ~~~~p~~RPs~~ev~~~L~ 751 (766)
++.||++||+..-....|+
T Consensus 494 L~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 494 LKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred hcCCccccCCccHHHhHHH
Confidence 9999999999876655554
No 443
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.64 E-value=8.6e-18 Score=180.56 Aligned_cols=247 Identities=22% Similarity=0.236 Sum_probs=188.5
Q ss_pred EEeccccccc-ccCCccccCCCCCCEEecccccCccC----CCccCCCCCCCCEEEccCCcCCC------CCCcccCCCC
Q 004232 122 VLSLVSLGIW-GSLPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFNN------TIPNWFDSLP 190 (766)
Q Consensus 122 ~L~L~~n~l~-~~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~ 190 (766)
.|+|..+.++ ...+..|..+.+|+.|++++|.++.. ++..+...++|++|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 45666778888999999999998542 56677888899999999998873 2445678899
Q ss_pred CCCEEEccCccCCCCCCccccCCCC---CCEEEccCCccCCCCC-----CCCCC-CCCCEEECCCCCCCCCCC----CC-
Q 004232 191 SLTFLSMRNNKLAGPFPSSIQRIST---LSDLDLSKNAISGSLP-----DLSSL-GSLNVLNLSDNKLDSNLP----KL- 256 (766)
Q Consensus 191 ~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p-----~~~~l-~~L~~L~ls~N~l~~~~p----~~- 256 (766)
+|+.|++++|.+.+..+..+..+.+ |++|++++|.+++... .+..+ ++|+.|++++|.+++... ..
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999998777777766665 9999999999874211 24556 899999999999985321 11
Q ss_pred --CCCCcEEEccCCcCccC----CcccccCCCCCCEEEccCCcCCCCC----ccccCCCCCCCeEEeecCcCcccCCccC
Q 004232 257 --PRGLVMAFLSNNSFSGE----IPKQYGQLNQLQQLDMSFNALRGMP----PPAIFSLPNISDLNLASNKFSGSLPKNL 326 (766)
Q Consensus 257 --~~~l~~l~ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~g~~p~~~ 326 (766)
...++.+++++|.+++. ++..+..+++|+.|++++|.+++.. ...+..+++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 24689999999999853 3445566789999999999987543 3345678899999999999985322222
Q ss_pred C-----CCCCccEEeCcCCccc----cCCCCCCCCCCCCceeecCCCcCCC
Q 004232 327 N-----CGGKLVFFDISNNKLT----GGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 327 ~-----~~~~L~~L~ls~N~l~----g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
. ....|+.|++++|.++ ..++..+...+.++.+++++|.++.
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 1 2478999999999987 2233445556789999999998874
No 444
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=2.2e-16 Score=180.17 Aligned_cols=249 Identities=17% Similarity=0.189 Sum_probs=159.5
Q ss_pred cCCceecCCceeEEEEEe-cCCceEEEEEcc----CC-h-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 487 MSAIMGEGSYGKLYKGRL-ENGTSVAIRCLP----SS-K-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~----~~-~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..+++|.|+||.|+.... ......+.|... .. . ......+..|..+-.+++|||++..+..+.+..
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~------- 394 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID------- 394 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-------
Confidence 467899999997777653 233334444322 11 1 111222666777888899999998887776643
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...-+||||++ ||...+.... .+...++-.+..|+..|++|+|+. +|.|||+|++|++++.++.+||+|||.
T Consensus 395 -~~~~~mE~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~ 466 (601)
T KOG0590|consen 395 -GILQSMEYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGA 466 (601)
T ss_pred -cchhhhhcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCc
Confidence 23344999999 9999886542 266777888999999999999998 899999999999999999999999999
Q ss_pred Cccccccc---------ccccCC---CCCCcc-cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 640 SIVSEDIN---------SVGGKQ---EDPNSW-EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 640 a~~~~~~~---------~~~~~~---~~~~~~-~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
+....... ..+..+ ++.... ++-....||||.||++..|++|+.||.......... ..........
T Consensus 467 ~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-~~~~~~~~~~ 545 (601)
T KOG0590|consen 467 ASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-KTNNYSDQRN 545 (601)
T ss_pred ceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-hhhccccccc
Confidence 85432110 011111 111111 111224699999999999999999876432211110 0000000011
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN--LQYAA 754 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~~~ 754 (766)
....+. ............++.+.++.||.+|-++++|+++ ++++.
T Consensus 546 ~~~~~~---~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 546 IFEGPN---RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred cccChH---HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 100010 0001122345677889999999999999999865 55543
No 445
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.58 E-value=5e-16 Score=168.80 Aligned_cols=184 Identities=26% Similarity=0.349 Sum_probs=135.6
Q ss_pred ceecCCceeEEEEE----ecCCceEEEEEccCChh--hhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcceE
Q 004232 490 IMGEGSYGKLYKGR----LENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~----~~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|+|.||.|+..+ .+.|...|.|.+++... ......+.|..++...+ ||.+|++.-.+..+ ...
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~--------~kl 72 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTD--------GKL 72 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccc--------cch
Confidence 36999999999764 34577788887765421 11225566778888887 99999987555543 268
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
+++++|..+|++...+.+.. ..+......+...+|.+++++|.. +|+|||+|++||++|.+|++|+.|||+++.
T Consensus 73 ~l~ld~~rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 73 YLILDFLRGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hHhhhhcccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 99999999999999886543 245555566777889999999997 899999999999999999999999999976
Q ss_pred cccccccccCCCC--CCcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 643 SEDINSVGGKQED--PNSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 643 ~~~~~~~~~~~~~--~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
.-+.....++.++ +.-.......+|+||||++++||+||..||..
T Consensus 147 ~v~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 147 AVKEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 4322111111111 10011244568999999999999999999863
No 446
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.1e-14 Score=143.72 Aligned_cols=135 Identities=15% Similarity=0.218 Sum_probs=94.5
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhh--HHH----------------------HHHHHHHHHhCCCCC--c
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYT--VRN----------------------LKLRLDLLAKLRHPH--L 541 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~--~~~----------------------~~~e~~~l~~l~Hpn--i 541 (766)
.+.||+|+||.||+|...+|+.||||++....... ... ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999886532111 111 123445555554332 2
Q ss_pred ccccceeecCCCCCCcCcceEEEEEEccCCCChhhh-hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCC
Q 004232 542 VCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTH-ISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNNRV 619 (766)
Q Consensus 542 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrdl 619 (766)
.+.+++ ...++||||+++|++... +.... .. .+...++.+++.++.++|. . +|+||||
T Consensus 82 ~~~~~~------------~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl 141 (187)
T cd05119 82 PKPIDL------------NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDL 141 (187)
T ss_pred CceEec------------CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCC
Confidence 222221 135899999999665322 21110 11 4567889999999999998 5 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCccc
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~ 643 (766)
||+||+++ ++.++++|||.+...
T Consensus 142 ~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 142 SEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred ChhhEEEE-CCcEEEEECcccccc
Confidence 99999999 899999999998543
No 447
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.56 E-value=7.6e-16 Score=175.09 Aligned_cols=236 Identities=19% Similarity=0.244 Sum_probs=157.2
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCCh-hhhHHHHHHHHHH--HHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK-KYTVRNLKLRLDL--LAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-~~~~~~~~~e~~~--l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++...+.+|++.|=+|.+|+.+.|. |.||++-+.+ ....+.|+++++- .+.++|||.+++.-+-... .
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~--------k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTD--------K 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhh--------H
Confidence 4566788999999999999988887 7889875543 3334445443332 4556899999986543221 2
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
-.|||-+|..+ +|++.|..+ ..+...++.-|+.|+..|+.-+|.. +|+|||||++||||..-.-+.++||.--
T Consensus 95 AAylvRqyvkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsF 167 (1431)
T KOG1240|consen 95 AAYLVRQYVKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASF 167 (1431)
T ss_pred HHHHHHHHHhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhccccc
Confidence 45788888776 788877543 3467778888999999999999997 8999999999999999888999999764
Q ss_pred ccc---cccc-cc---------ccCCCCCCcc------------cC-CCCCCCEeehhHHHHHHhc-CCCccccCccchH
Q 004232 641 IVS---EDIN-SV---------GGKQEDPNSW------------EM-TKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQ 693 (766)
Q Consensus 641 ~~~---~~~~-~~---------~~~~~~~~~~------------~~-~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~ 693 (766)
|.. ++.. .. ..-.-.|.++ .. .+.+-||||.||++.|+++ |+++|.-.+-..
T Consensus 168 KPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~a- 246 (1431)
T KOG1240|consen 168 KPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLA- 246 (1431)
T ss_pred CCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHh-
Confidence 321 1110 00 0000001100 11 3456799999999999998 466664211000
Q ss_pred HHHhhhh---cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 694 EELDSLN---SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 694 ~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
.+... .+.-+.++.|+ .+..++..+++.||++|-|+++.++.=
T Consensus 247 --Yr~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 247 --YRSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred --HhccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHhh
Confidence 01000 00011222222 256778899999999999999998763
No 448
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.55 E-value=3.7e-14 Score=133.95 Aligned_cols=134 Identities=14% Similarity=0.193 Sum_probs=110.8
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCC--CCcccccceeecCCCCCCcCcceEEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRH--PHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~H--pniv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
.+.||+|.++.||+++..+ ..++||....... ...+.+|+..++.++| +++.+++++.... +..+++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~--------~~~~~v 71 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESD--------GWSYLL 71 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC--------CccEEE
Confidence 4679999999999999754 7899998865433 4678899999999977 4888887766543 257999
Q ss_pred EEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
+||++++.+..+ ++.....++.+++++++++|.....+++|||++|+||+++..+.+++.|||.+..
T Consensus 72 ~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 72 MEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 999999887653 4556677889999999999986555799999999999999989999999998854
No 449
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.6e-13 Score=140.16 Aligned_cols=139 Identities=15% Similarity=0.197 Sum_probs=105.1
Q ss_pred CCcee-cCCceeEEEEEecCCceEEEEEccCCh-------------hhhHHHHHHHHHHHHhCCCCCc--ccccceeecC
Q 004232 488 SAIMG-EGSYGKLYKGRLENGTSVAIRCLPSSK-------------KYTVRNLKLRLDLLAKLRHPHL--VCLLGHCIDG 551 (766)
Q Consensus 488 ~~~lG-~G~fg~Vy~~~~~~g~~vAvK~l~~~~-------------~~~~~~~~~e~~~l~~l~Hpni--v~l~g~~~~~ 551 (766)
..+|| .||.|+||+.... +..++||...... ......+.+|++++.+++|++| .+.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35788 8999999999875 6778898775321 1223567889999999998885 6677765443
Q ss_pred CCCCCcCcceEEEEEEccCC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSN-GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
.+. ....++|+||+++ .+|.+++.+. .++.. .+.+++.++.+||+. +|+||||||+|||++.++
T Consensus 115 ~~~----~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 115 HGL----FYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDG 179 (239)
T ss_pred cCc----ceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCC
Confidence 210 1134699999997 6898887642 23332 356789999999997 899999999999999888
Q ss_pred cEEEecCCCCcc
Q 004232 631 IAKLSDYGLSIV 642 (766)
Q Consensus 631 ~~kl~DFGla~~ 642 (766)
.++|+|||.+..
T Consensus 180 ~v~LIDfg~~~~ 191 (239)
T PRK01723 180 KFWLIDFDRGEL 191 (239)
T ss_pred CEEEEECCCccc
Confidence 999999998754
No 450
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.50 E-value=2.2e-14 Score=147.30 Aligned_cols=235 Identities=15% Similarity=0.163 Sum_probs=135.2
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCC----------CCcccccceeec
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRH----------PHLVCLLGHCID 550 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~H----------pniv~l~g~~~~ 550 (766)
+...+.||.|+|+.||.++. ++|+.+|||..... .....+++++|.-....+.+ -.++--++...-
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 34467899999999999996 46999999987432 23346777777655444333 112211222221
Q ss_pred CCCCC---------CcCcceEEEEEEccCCCChhhhhh---cCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccC
Q 004232 551 GGGRD---------DYAVNKVFLVYEFMSNGNFRTHIS---ENTP-GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNN 617 (766)
Q Consensus 551 ~~~~~---------~~~~~~~~lv~Ey~~~GsL~~~l~---~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 617 (766)
.+.++ .+..-+.+++|+-+ .+||.+.+. .... ...+....|+.+..|+.+-+++||+. +++|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 11111 11111346777776 458877643 2221 12244566777889999999999998 99999
Q ss_pred CCCCCceEEcCCCcEEEecCCCCccccccccc--ccCCCCCC-----------cccCCCCCCCEeehhHHHHHHhcCCCc
Q 004232 618 RVKTNNILLNEHRIAKLSDYGLSIVSEDINSV--GGKQEDPN-----------SWEMTKLEDDVFSFGFMLLESVAGPSV 684 (766)
Q Consensus 618 dlk~~NILld~~~~~kl~DFGla~~~~~~~~~--~~~~~~~~-----------~~~~~~~~~DV~SfGvil~ElltG~~p 684 (766)
||||+|++++.+|.++++||+-.......... ......|. ....++.+.|.|++|+++|.|..|..|
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lP 249 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLP 249 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-S
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCC
Confidence 99999999999999999999876433322221 01111111 011245567999999999999999999
Q ss_pred cccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCC
Q 004232 685 AARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSR 740 (766)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~R 740 (766)
++.........+ ... .+. +-.+.+..|+...++.+|.+|
T Consensus 250 f~~~~~~~~~~~---------------~f~-~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 250 FGLSSPEADPEW---------------DFS-RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp TCCCGGGSTSGG---------------GGT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred CCCCCccccccc---------------cch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence 874321110000 011 111 222346788899999999988
No 451
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.49 E-value=1e-13 Score=161.33 Aligned_cols=185 Identities=22% Similarity=0.304 Sum_probs=129.0
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC---CCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR---HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~---Hpniv~l~g~~~~~~~~~~~~ 558 (766)
-..|.+.+.||+|+||+||+|...+|+.||+|.=+....- +|.--.+++.||+ -+-|..+..++.-.
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~------- 766 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQ------- 766 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccC-------
Confidence 4567888999999999999999888999999976543221 1222223444444 12233332222222
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-------CCc
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-------HRI 631 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-------~~~ 631 (766)
+.-++|+||.+.|+|.+++.. .+..+|.-.+.++.++++-+++||.. +|||+||||+|.+|-. ...
T Consensus 767 -~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 767 -NASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred -CcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 245899999999999999973 35689999999999999999999998 8999999999999953 245
Q ss_pred EEEecCCCCcc---cccccccccCC-------CCCCcccCCCCCCCEeehhHHHHHHhcCCC
Q 004232 632 AKLSDYGLSIV---SEDINSVGGKQ-------EDPNSWEMTKLEDDVFSFGFMLLESVAGPS 683 (766)
Q Consensus 632 ~kl~DFGla~~---~~~~~~~~~~~-------~~~~~~~~~~~~~DV~SfGvil~ElltG~~ 683 (766)
++|.|||.+.- ..+.....+.. .+......-++++|-|.+..+++-|+.|+.
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 89999999842 22221111110 111122334567899999999999999864
No 452
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.48 E-value=1.1e-13 Score=133.10 Aligned_cols=190 Identities=18% Similarity=0.271 Sum_probs=129.4
Q ss_pred hcCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCC-CcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP-HLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hp-niv~l~g~~~~~~~~~~~~~ 559 (766)
.+.|.+.+.||.|+||.+|.|. ..+|+.||||.=...... -++..|..+.+.++|- .|-.+.-|..+.
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~-------- 83 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEK-------- 83 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhcccc--------
Confidence 3678999999999999999998 568999999975443222 2455677777777653 232233233322
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC---CcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~D 636 (766)
..-.+|||.. +.+|.++..--. +.++-.+.+-.|-|+..-++|+|.+ +++||||||+|.|..-+ ..+-+.|
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred ccceeeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 2347999975 557777653221 2256677788899999999999998 78999999999998743 3578999
Q ss_pred CCCCcccccccccccCC-------CCCCccc--------CCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 637 YGLSIVSEDINSVGGKQ-------EDPNSWE--------MTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 637 FGla~~~~~~~~~~~~~-------~~~~~~~--------~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
||+|+...+..+....+ ...+.+. ..+-..|+=|.|-+|.-.--|.-||..
T Consensus 158 FGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg 223 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG 223 (341)
T ss_pred ccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence 99997654433211111 0000110 111245999999998888899999863
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=1.8e-13 Score=158.84 Aligned_cols=109 Identities=28% Similarity=0.479 Sum_probs=100.6
Q ss_pred CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcC
Q 004232 260 LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (766)
Q Consensus 260 l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~ 339 (766)
+..|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..+..+++|+.|+|++|+++|.+|+.++.+++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCC-CCCceeecCCCcCCC
Q 004232 340 NKLTGGLPSCLSNE-SDKRVVKFRGNCLSS 368 (766)
Q Consensus 340 N~l~g~~p~~~~~~-~~l~~l~l~~N~l~~ 368 (766)
|+++|.+|..+... .++..+++.+|...+
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcccc
Confidence 99999999988753 356678888886544
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.39 E-value=8.2e-15 Score=156.33 Aligned_cols=182 Identities=30% Similarity=0.470 Sum_probs=131.5
Q ss_pred cCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCE
Q 004232 139 HRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSD 218 (766)
Q Consensus 139 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 218 (766)
..|..-...||+.|++. .+|..+..+..|..|.|+.|.+. .+|..+.+|..|++|+|+.|+++ .+|..+..|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 45666677888888886 68888888888888888888876 67888888888888888888887 6777777664 777
Q ss_pred EEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCC
Q 004232 219 LDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMP 298 (766)
Q Consensus 219 L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 298 (766)
|-+++|+++..+++++.+..|..||.+.|.+. .+|..++.+.+|+.|++..|++...|
T Consensus 148 li~sNNkl~~lp~~ig~~~tl~~ld~s~nei~----------------------slpsql~~l~slr~l~vrRn~l~~lp 205 (722)
T KOG0532|consen 148 LIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQ----------------------SLPSQLGYLTSLRDLNVRRNHLEDLP 205 (722)
T ss_pred EEEecCccccCCcccccchhHHHhhhhhhhhh----------------------hchHHhhhHHHHHHHHHhhhhhhhCC
Confidence 87888887766666666666766766666554 35667777777777777777777766
Q ss_pred ccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCC
Q 004232 299 PPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCL 350 (766)
Q Consensus 299 ~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~ 350 (766)
+. ++.| .|..||++.|+++ .||-.|..+..|++|-|.+|.|+ ..|..+
T Consensus 206 ~E-l~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 206 EE-LCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred HH-HhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHH
Confidence 53 3444 3667777777776 66777777777777777777776 444443
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.39 E-value=8.5e-15 Score=156.23 Aligned_cols=175 Identities=31% Similarity=0.403 Sum_probs=138.5
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
.|+.-...+|+.|.+ ..+|..+..+..|+.|.|++|.+. .+|..+.+|..|..|+|+.|+++ .+|..+..|+ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~-~elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRF-SELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhcccccc-ccCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 455556788899998 578999999999999999999996 78999999999999999999998 6788888877 9999
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC-CCCcEEEccCCcCccCC
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLP-RGLVMAFLSNNSFSGEI 274 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~~l~ls~N~l~~~~ 274 (766)
-+++|+++ .+|..++.+..|..||.+.|.+...++.++.+.+|+.|++..|++...++.+. -.|..||+|+|+++ .+
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~LpLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLPLIRLDFSCNKIS-YL 226 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCceeeeecccCcee-ec
Confidence 99999997 78999999999999999999999888889999999999999998865444332 12444555555555 45
Q ss_pred cccccCCCCCCEEEccCCcCCC
Q 004232 275 PKQYGQLNQLQQLDMSFNALRG 296 (766)
Q Consensus 275 p~~~~~l~~L~~L~ls~N~l~~ 296 (766)
|-.|.+|+.|++|-|.+|.|+.
T Consensus 227 Pv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 227 PVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred chhhhhhhhheeeeeccCCCCC
Confidence 5555555555555555555543
No 456
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=2.5e-12 Score=142.67 Aligned_cols=145 Identities=19% Similarity=0.276 Sum_probs=99.0
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhH----------------------------------------
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTV---------------------------------------- 523 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~---------------------------------------- 523 (766)
.|+ .+.||.|++|.||+|++.+|+.||||+....-....
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 344 357999999999999999999999999865311100
Q ss_pred HHHHHHHHHHHhC----CCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHH
Q 004232 524 RNLKLRLDLLAKL----RHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGV 599 (766)
Q Consensus 524 ~~~~~e~~~l~~l----~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~i 599 (766)
-+|.+|...+.++ +|.+-|..-.++.+-. ...+|||||++|++|.+.......+ . .+..++..+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~-------~~~vLvmE~i~G~~L~~~~~~~~~~--~---~~~~ia~~~ 265 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRT-------SERVLTMEWIDGIPLSDIAALDEAG--L---DRKALAENL 265 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhc-------CCceEEEEeECCcccccHHHHHhcC--C---CHHHHHHHH
Confidence 0234455444444 2333344434443322 2358999999999998876432111 2 234566665
Q ss_pred HH-HHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcccc
Q 004232 600 AK-AVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 600 a~-gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~ 644 (766)
+. .+..+|.. +++|+|+||.||+++.++.+++.|||++....
T Consensus 266 ~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 266 ARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 55 46778876 89999999999999999999999999986543
No 457
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.38 E-value=1.4e-11 Score=123.98 Aligned_cols=189 Identities=16% Similarity=0.282 Sum_probs=130.1
Q ss_pred cCCCcCCceecCCceeEEEEE-ecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGR-LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
-.|.+.+.||+|+||+.+.|+ +-+++.||||.=+... ..-++..|-...+.+ ..+.|-..+-| ..+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYF--GqeG~------ 97 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYF--GQEGK------ 97 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeee--ccccc------
Confidence 358899999999999999998 6689999999754322 122344555555555 35677665422 22221
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-----cEEEe
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-----IAKLS 635 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-----~~kl~ 635 (766)
.-.||+|.. +-+|.++..=. ++.++......+|.|+..-++|+|++ ..|.|||||+|.||..-+ .+.+.
T Consensus 98 ~NiLVidLL-GPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred hhhhhhhhh-CcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEE
Confidence 347899976 44666654321 23478888899999999999999998 789999999999997543 48899
Q ss_pred cCCCCcccccccccccCC-------CCCCcccC--------CCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 636 DYGLSIVSEDINSVGGKQ-------EDPNSWEM--------TKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 636 DFGla~~~~~~~~~~~~~-------~~~~~~~~--------~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
|||+|+...+..+....+ ...+.++. -+-..|.=|+|-+++..+.|.-||..
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 999998765433221111 00111111 11245999999999999999999863
No 458
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.30 E-value=1.9e-12 Score=143.40 Aligned_cols=196 Identities=33% Similarity=0.501 Sum_probs=127.0
Q ss_pred EEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCC-CCCEEEccCCcCCCCCCcccCCCCCCCEEEccCc
Q 004232 122 VLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMV-KLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (766)
Q Consensus 122 ~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (766)
.|++..|.+...+ ..+..++.++.|++.+|.++ .+|+....+. +|+.|++++|.+. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5777777664333 34566678888888888886 5777777774 8888888888887 45567788888888888888
Q ss_pred cCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcCccCCcccc
Q 004232 201 KLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEIPKQY 278 (766)
Q Consensus 201 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~~~~p~~~ 278 (766)
+++ .+|...+.++.|+.|++++|+++...+....+..|++|.+++|.+...+..+ ...+..+.+.+|++.. ++..+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~ 251 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED-LPESI 251 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-ccchh
Confidence 887 5666666778888888888888855444455666888888888532222111 1223333344444442 24455
Q ss_pred cCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCc
Q 004232 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPK 324 (766)
Q Consensus 279 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~ 324 (766)
+.+++++.|++++|+++.... +..+.+++.|++++|.++..+|.
T Consensus 252 ~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 252 GNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred ccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 555556666666666655544 55555566666666655544443
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.28 E-value=4.5e-12 Score=140.46 Aligned_cols=198 Identities=34% Similarity=0.448 Sum_probs=146.7
Q ss_pred CEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCC-CCCEEEccCccCCCCCCccccCCCCCCEEEccC
Q 004232 145 EYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLP-SLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSK 223 (766)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 223 (766)
..|+++.|.+.. -+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++
T Consensus 96 ~~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeecccccccc-CchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 468888888743 3445667788999999999998 5677777775 9999999999998 6777889999999999999
Q ss_pred CccCCCCCCCCCCCCCCEEECCCCCCCCCCCC--CCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccc
Q 004232 224 NAISGSLPDLSSLGSLNVLNLSDNKLDSNLPK--LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPA 301 (766)
Q Consensus 224 N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~--~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 301 (766)
|+++...+..+.+++|+.|++++|++....+. .+..+..+.+++|.+. .++..+.++.++..|.+++|++... +..
T Consensus 173 N~l~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~-~~~ 250 (394)
T COG4886 173 NDLSDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLEDL-PES 250 (394)
T ss_pred chhhhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeeec-cch
Confidence 99986655555889999999999998765554 4555777777777533 3556667777777777777777654 345
Q ss_pred cCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCC
Q 004232 302 IFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC 349 (766)
Q Consensus 302 ~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~ 349 (766)
+..+++++.|++++|.++ .++. +....+++.||+++|.++..+|..
T Consensus 251 ~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 251 IGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhh
Confidence 666677777777777776 3333 666677777777777776555543
No 460
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.26 E-value=3.2e-12 Score=136.89 Aligned_cols=237 Identities=14% Similarity=0.175 Sum_probs=140.0
Q ss_pred CCceecCCceeEEEEEecC----CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccc-----eeecCCCCCCcC
Q 004232 488 SAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLG-----HCIDGGGRDDYA 558 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g-----~~~~~~~~~~~~ 558 (766)
....++.+++.+..++... .+.++.|..+..+........+++-.+....|-+..-+.. +-.... .....
T Consensus 249 ~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~-~~v~~ 327 (516)
T KOG1033|consen 249 SKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKR-NKVGK 327 (516)
T ss_pred cccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccc-ccccc
Confidence 3455666666666655322 2344444444333233334444555554444433333222 000000 00000
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...+|+.|++|...+|.++|..+......+|.....++.+++.|+.| + +.+|||+||.||....+..+||.|||
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhh
Confidence 12478999999999999999876666678899999999999999999 3 67999999999999988899999999
Q ss_pred CCcccccccc-------cccCCCCC-------CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhccc
Q 004232 639 LSIVSEDINS-------VGGKQEDP-------NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 639 la~~~~~~~~-------~~~~~~~~-------~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
+........+ .....++. .....+..|+|+||+|++|+|+++ -..++.. ......
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-----~~t~~d----- 471 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-----IATLTD----- 471 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-----HHhhhh-----
Confidence 9744332220 00000111 122456779999999999999997 2222211 000111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDI 746 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev 746 (766)
.....++|......+. -..+..+.+...|.+||++.++
T Consensus 472 ~r~g~ip~~~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 472 IRDGIIPPEFLQDYPE-----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred hhcCCCChHHhhcCcH-----HHHHHHHhcCCCcccCchHHHH
Confidence 1112222222222222 2356778899999999955443
No 461
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.21 E-value=1.4e-11 Score=141.02 Aligned_cols=199 Identities=21% Similarity=0.314 Sum_probs=119.9
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
-.+|+..+.|-.|+||.||..+.+ +.+.+|. ++++... |++ ||..+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----------ilR-----nilt~a~-------------- 130 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----------ILR-----NILTFAG-------------- 130 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhh-cccccch-----------hhh-----ccccccC--------------
Confidence 367888999999999999999754 4677777 3332211 111 2333321
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..+.| ||=...+..-++ +. .+.+.+++|+|+- +|+|||+||+|.+|..-|++|++|||++
T Consensus 131 npfvv------gDc~tllk~~g~---lP--------vdmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 131 NPFVV------GDCATLLKNIGP---LP--------VDMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred Cccee------chhhhhcccCCC---Cc--------chhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhh
Confidence 12233 444444433221 11 1227899999996 9999999999999999999999999998
Q ss_pred ccccccc--------------ccccCC--CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHh
Q 004232 641 IVSEDIN--------------SVGGKQ--EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELD 697 (766)
Q Consensus 641 ~~~~~~~--------------~~~~~~--~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~ 697 (766)
+..-... ....++ ..|.+ ...|...+|||++|+|+||-+-|..||..+. ..+.+.
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt--peelfg 268 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT--PEELFG 268 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC--HHHHHh
Confidence 6421110 000111 11111 1234557899999999999999999987432 222222
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP 741 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP 741 (766)
.+...+ +..|. ..+....++.+++.+-++.+|..|-
T Consensus 269 ~visd~----i~wpE----~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 269 QVISDD----IEWPE----EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhh----ccccc----cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 222211 11110 0111123356778888899999885
No 462
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=4.9e-12 Score=144.80 Aligned_cols=247 Identities=16% Similarity=0.207 Sum_probs=162.8
Q ss_pred hcCCCcCCceecCCceeEEEEEe--cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~ 556 (766)
...|.+.+-||+|+|+.|-.... .....+|+|.+.... ....+....|..+-+.+. |+|++.+++...+++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~---- 94 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR---- 94 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc----
Confidence 34566777899999999998864 345567777665443 223445556777777776 999999998877653
Q ss_pred cCcceEEEEEEccCCCChhhhh-hcCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCCCcccCCCCCCceEEcCCC-cEE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHI-SENTPGKVLNWSERLAVLIGVAKAVQFLH-TGVIPGFFNNRVKTNNILLNEHR-IAK 633 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l-~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrdlk~~NILld~~~-~~k 633 (766)
..++++||..+|++...+ .... ...+......+..++..|+.|+| .. ++.|||+||+|.+++..+ ..|
T Consensus 95 ----~~~~~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~ 165 (601)
T KOG0590|consen 95 ----SYLLSLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALK 165 (601)
T ss_pred ----ccccccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCccc
Confidence 679999999999999888 3322 12444556678889999999999 65 889999999999999999 999
Q ss_pred EecCCCCccccc-cc-------ccccCCCCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhh
Q 004232 634 LSDYGLSIVSED-IN-------SVGGKQEDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 634 l~DFGla~~~~~-~~-------~~~~~~~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~ 700 (766)
++|||+|..... .. ..+...++.. .........|+||.|+++.-+++|..|++............+.
T Consensus 166 ~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~ 245 (601)
T KOG0590|consen 166 IADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKS 245 (601)
T ss_pred CCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecc
Confidence 999999854432 11 0110111110 0012245679999999999999999997643221111100000
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... .......... .....++..+++..+|..|.+.+++...
T Consensus 246 ~~~----~~~~~~~~~~----~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 246 NKG----RFTQLPWNSI----SDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred ccc----ccccCccccC----ChhhhhcccccccCCchhcccccccccc
Confidence 000 0000001111 1124566778888999999998887544
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.16 E-value=7.3e-11 Score=118.75 Aligned_cols=196 Identities=19% Similarity=0.268 Sum_probs=121.6
Q ss_pred HHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 004232 533 LAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPG-KVLNWSERLAVLIGVAKAVQFLHTGVI 611 (766)
Q Consensus 533 l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~ 611 (766)
+-++.|-|||+++.|+.+.... ......++.|||+.|++.++|++.... +.+....-.+...||..||.|||+ +.
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~---e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYE---EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccc---cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 4456799999999988765321 124678999999999999999864322 223334445678899999999998 56
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCccccccc------c-c-----ccCCCCCCcccCCCCCCCEeehhHHHHHHh
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN------S-V-----GGKQEDPNSWEMTKLEDDVFSFGFMLLESV 679 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~------~-~-----~~~~~~~~~~~~~~~~~DV~SfGvil~Ell 679 (766)
|+|+|+++..+-|.+..++-+|+.----........ . . +...++.......+..+|||+||+..+||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 799999999999999999988875322211100000 0 0 000011111122334689999999999999
Q ss_pred cCCCccccCcc-chHHH-HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 680 AGPSVAARKGQ-FLQEE-LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 680 tG~~p~~~~~~-~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.|..-...... ...+. +.. ...-.-++.. ..++.+|++.+|..||+|++.+..
T Consensus 277 ilEiq~tnseS~~~~ee~ia~-----~i~~len~lq------------r~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIAN-----VIIGLENGLQ------------RGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred HheeccCCCcceeehhhhhhh-----heeeccCccc------------cCcCcccccCCCCCCcchhhhhcC
Confidence 88643221111 11110 000 0011111110 134578999999999999987654
No 464
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.16 E-value=1.3e-10 Score=112.34 Aligned_cols=129 Identities=16% Similarity=0.108 Sum_probs=94.1
Q ss_pred CceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCccc-ccceeecCCCCCCcCcceEEEEEE
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVC-LLGHCIDGGGRDDYAVNKVFLVYE 567 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~-l~g~~~~~~~~~~~~~~~~~lv~E 567 (766)
+.++.|.++.||+++.. +..+++|....... ....++.|..+++.+.+.+++. ++++. .. ..++|||
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~--------~~~lv~e 71 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PE--------TGVLITE 71 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CC--------CCeEEEE
Confidence 46789999999999875 77899998755432 1234678888888887666554 43332 11 2479999
Q ss_pred ccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 568 FMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV--IPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 568 y~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
|+++.++... . . ....++.+++++++.||+.. ...++|+|++|.||+++ ++.+++.|||.+.
T Consensus 72 ~i~G~~l~~~--~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 72 FIEGSELLTE--D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ecCCCccccc--c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 9999888643 0 0 11235678999999999874 22469999999999999 6689999999874
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.15 E-value=1.6e-10 Score=129.79 Aligned_cols=144 Identities=16% Similarity=0.200 Sum_probs=88.1
Q ss_pred hcCCCcCCceecCCceeEEEEEecC-CceEEEEEccCChhh----------------------------------hHHHH
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKY----------------------------------TVRNL 526 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~----------------------------------~~~~~ 526 (766)
..+|+. +-||+|++|.||+|++.+ |+.||||+....-.. ..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 689999999999999877 999999998653110 01222
Q ss_pred HHHHHHHHhC----------CCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhh--hhcCCCCCCCCHHHHHH
Q 004232 527 KLRLDLLAKL----------RHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTH--ISENTPGKVLNWSERLA 594 (766)
Q Consensus 527 ~~e~~~l~~l----------~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~--l~~~~~~~~l~~~~~~~ 594 (766)
.+|++.+... .+.+.+.+-.++.+-. ...+|||||++|+.+.+. +.+.+ .+. ..
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~s-------t~~VLvmE~i~G~~l~d~~~l~~~g----~d~---~~ 263 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYC-------SETVMVMERMYGIPVSDVAALRAAG----TDM---KL 263 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccC-------CCceEEEeeecCccHHhHHHHHhcC----CCH---HH
Confidence 3344333333 1333333323332211 245799999999999764 22221 121 11
Q ss_pred HHHHHHHH-HHHHhcCCCCCcccCCCCCCceEEcCCC----cEEEecCCCCccc
Q 004232 595 VLIGVAKA-VQFLHTGVIPGFFNNRVKTNNILLNEHR----IAKLSDYGLSIVS 643 (766)
Q Consensus 595 i~~~ia~g-L~yLH~~~~~~ivHrdlk~~NILld~~~----~~kl~DFGla~~~ 643 (766)
++...+.. +.-++.. +++|+|+||.||+++.++ .+++.|||+....
T Consensus 264 la~~~v~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 264 LAERGVEVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 22211111 1112233 899999999999999887 9999999997544
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1e-10 Score=111.90 Aligned_cols=126 Identities=27% Similarity=0.325 Sum_probs=49.3
Q ss_pred cccCCCCCCEEecccccccccCCcccc-CCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCccc-CCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIH-RLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF-DSLP 190 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~-~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~ 190 (766)
.+.+..+++.|+|++|.|..+ +.++ .+.+|+.||||+|.|+. ++ .+..+++|++|++++|+++.. ++.+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i-~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSI-SEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-T
T ss_pred ccccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCcc-ccchHHhCC
Confidence 345666789999999999654 3465 57899999999999974 43 588899999999999999854 3334 4689
Q ss_pred CCCEEEccCccCCCCC-CccccCCCCCCEEEccCCccCCCCCC-----CCCCCCCCEEEC
Q 004232 191 SLTFLSMRNNKLAGPF-PSSIQRISTLSDLDLSKNAISGSLPD-----LSSLGSLNVLNL 244 (766)
Q Consensus 191 ~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-----~~~l~~L~~L~l 244 (766)
+|+.|+|++|+|...- -..+..+++|+.|+|.+|.++.. +. +..+++|+.||-
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 9999999999987422 14567789999999999988754 32 456788888764
No 467
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.03 E-value=2.5e-11 Score=126.47 Aligned_cols=163 Identities=25% Similarity=0.231 Sum_probs=90.2
Q ss_pred ccCCCCCCEEecccccccccCC--ccccCCCCCCEEecccccCccCCC--ccCCCCCCCCEEEccCCcCCCCCCcc-cCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLP--DKIHRLYSLEYLDLSSNFLFGSVP--PKISTMVKLQTLILDDNFFNNTIPNW-FDS 188 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p--~~~~~L~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~ 188 (766)
=+++.+|+...|.+.... ..+ .....|++++.||||.|-+....| .-...|++|+.|+|+.|++....... -..
T Consensus 117 Qsn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 456778888888776652 223 345677888888888887754322 33456777777777777775332221 124
Q ss_pred CCCCCEEEccCccCCCC-CCccccCCCCCCEEEccCCc-cCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEcc
Q 004232 189 LPSLTFLSMRNNKLAGP-FPSSIQRISTLSDLDLSKNA-ISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLS 266 (766)
Q Consensus 189 l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls 266 (766)
++.|+.|.|+.|.|+.. +-..+..+++|+.|+|..|. +...-.....+..|+.|||++|++-..
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~-------------- 261 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDF-------------- 261 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccc--------------
Confidence 56677777777766521 11223445666666666664 111111123344555555555544210
Q ss_pred CCcCccCCcccccCCCCCCEEEccCCcCCCC
Q 004232 267 NNSFSGEIPKQYGQLNQLQQLDMSFNALRGM 297 (766)
Q Consensus 267 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 297 (766)
+ .-...+.++.|+.|+++.+.+..+
T Consensus 262 -~-----~~~~~~~l~~L~~Lnls~tgi~si 286 (505)
T KOG3207|consen 262 -D-----QGYKVGTLPGLNQLNLSSTGIASI 286 (505)
T ss_pred -c-----cccccccccchhhhhccccCcchh
Confidence 0 012345566666666666666543
No 468
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.00 E-value=6.6e-11 Score=117.35 Aligned_cols=63 Identities=32% Similarity=0.390 Sum_probs=34.4
Q ss_pred ccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCC
Q 004232 185 WFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKL 249 (766)
Q Consensus 185 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l 249 (766)
.....+.|+.|||++|.++ .+.++..-++.++.|++|+|.+.. +..+..|++|+.||||+|.+
T Consensus 279 ~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~nLa~L~~L~~LDLS~N~L 341 (490)
T KOG1259|consen 279 SADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQNLAELPQLQLLDLSGNLL 341 (490)
T ss_pred ecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-ehhhhhcccceEeecccchh
Confidence 3444556666666666665 455555555666666666666542 22344455555555555544
No 469
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=1.1e-10 Score=121.73 Aligned_cols=191 Identities=26% Similarity=0.275 Sum_probs=133.0
Q ss_pred cccCCCCCCEEecccccccccCC--ccccCCCCCCEEecccccCccCCCccC-CCCCCCCEEEccCCcCCCCC-CcccCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLP--DKIHRLYSLEYLDLSSNFLFGSVPPKI-STMVKLQTLILDDNFFNNTI-PNWFDS 188 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p--~~~~~L~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~-p~~~~~ 188 (766)
-...|++++.|||+.|-|+...| .....|++|+.|+||.|++.-...... ..++.|+.|.|+.|.|+-.- -.....
T Consensus 141 ~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~ 220 (505)
T KOG3207|consen 141 YSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLT 220 (505)
T ss_pred hhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHh
Confidence 56789999999999998865433 456789999999999999964333222 36789999999999998421 223457
Q ss_pred CCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCC--CCCCCCCCCCEEECCCCCCCCC-CCCCCCCCcEEEc
Q 004232 189 LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSL--PDLSSLGSLNVLNLSDNKLDSN-LPKLPRGLVMAFL 265 (766)
Q Consensus 189 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~l~l 265 (766)
+|+|+.|+|..|...+.-..+...+..|+.|||++|++-... +..+.++.|+.|+++.+.+.+. +|+.
T Consensus 221 fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~--------- 291 (505)
T KOG3207|consen 221 FPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDV--------- 291 (505)
T ss_pred CCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCc---------
Confidence 899999999999644444445566789999999999987544 5578899999999998877642 1111
Q ss_pred cCCcCccCCcccccCCCCCCEEEccCCcCCCCCc-cccCCCCCCCeEEeecCcCc
Q 004232 266 SNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPP-PAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 266 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 319 (766)
..-.-...+++|++|+++.|++..... ..+..+++|+.|....|.|+
T Consensus 292 -------~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 292 -------ESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred -------cchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 111113346678888888888754331 12334455555555555554
No 470
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.95 E-value=9.1e-09 Score=100.56 Aligned_cols=135 Identities=13% Similarity=0.151 Sum_probs=93.0
Q ss_pred CceecCCceeEEEEEecC-------CceEEEEEccCCh----------------------hhhHHHHH----HHHHHHHh
Q 004232 489 AIMGEGSYGKLYKGRLEN-------GTSVAIRCLPSSK----------------------KYTVRNLK----LRLDLLAK 535 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~-------g~~vAvK~l~~~~----------------------~~~~~~~~----~e~~~l~~ 535 (766)
..||.|.-+.||.|.-.+ +..+|||..+... ....+.+. +|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999998543 4789999875421 00122233 78888888
Q ss_pred CCC--CCcccccceeecCCCCCCcCcceEEEEEEccCCCChhh-hhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCC
Q 004232 536 LRH--PHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRT-HISENTPGKVLNWSERLAVLIGVAKAVQFL-HTGVI 611 (766)
Q Consensus 536 l~H--pniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~ 611 (766)
+.- -++-+.+++ . .-++||||+.++.+.. .+.+. .++..+...+..++..+|.++ |..
T Consensus 83 l~~~Gv~vP~pi~~--~----------~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H~~-- 144 (197)
T cd05146 83 MQKAGIPCPEVVVL--K----------KHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYKEC-- 144 (197)
T ss_pred HHHcCCCCCeEEEe--c----------CCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHHhC--
Confidence 743 334444433 1 2489999998765432 22211 133344566778999999999 665
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+++|+||++.||+++ ++.+.|.|||-+...
T Consensus 145 -glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 -NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred -CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 899999999999997 467999999987543
No 471
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.94 E-value=9.1e-11 Score=116.39 Aligned_cols=134 Identities=25% Similarity=0.319 Sum_probs=106.7
Q ss_pred ccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCC
Q 004232 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (766)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (766)
..+..-..|+.|||++|.|+ .+.+++.-++.++.|++|+|.|.. -..+..|.+|+.|||++|.++ .+-.|-.+|-+
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--v~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGN 353 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--VQNLAELPQLQLLDLSGNLLA-ECVGWHLKLGN 353 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--ehhhhhcccceEeecccchhH-hhhhhHhhhcC
Confidence 34445567889999999884 566778888999999999999863 344888999999999999887 45666678889
Q ss_pred CCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCC--CCCCCCCCCCCEEECCCCCCCC
Q 004232 192 LTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGS--LPDLSSLGSLNVLNLSDNKLDS 251 (766)
Q Consensus 192 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~l~~L~~L~ls~N~l~~ 251 (766)
++.|.|+.|.+... +.+.++.+|.+||+++|++... ...+++|+.|+++.|.+|.+.+
T Consensus 354 IKtL~La~N~iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 354 IKTLKLAQNKIETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred EeeeehhhhhHhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 99999999988532 5678889999999999998743 2347889999999988888765
No 472
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.92 E-value=8.7e-09 Score=104.25 Aligned_cols=145 Identities=19% Similarity=0.274 Sum_probs=107.7
Q ss_pred CceecCCceeEEEEEecCCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCC--CcccccceeecCCCCCCcCcceEEEE
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHP--HLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hp--niv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
+.||.|.++.||+++..+|..+++|....... .....+.+|.++++.+++. ++.++++++..... ....++|
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~-----~~~~~~v 78 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV-----LGTPFYV 78 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc-----cCCceEE
Confidence 46899999999999987778899998765432 1345788899999998763 45666666544210 0245899
Q ss_pred EEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 004232 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV----------------------------------- 610 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 610 (766)
|||++++++...+.. ..++..++..++.+++++|++||+..
T Consensus 79 ~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (223)
T cd05154 79 MERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEP 154 (223)
T ss_pred EEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccccc
Confidence 999999988775531 13567777788888888888888521
Q ss_pred ------------------CCCcccCCCCCCceEEcC--CCcEEEecCCCCcc
Q 004232 611 ------------------IPGFFNNRVKTNNILLNE--HRIAKLSDYGLSIV 642 (766)
Q Consensus 611 ------------------~~~ivHrdlk~~NILld~--~~~~kl~DFGla~~ 642 (766)
...++|+|+.+.||+++. ++.+.|.||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 155 PAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 56789999998754
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.91 E-value=5.4e-10 Score=107.00 Aligned_cols=108 Identities=31% Similarity=0.416 Sum_probs=41.3
Q ss_pred ccCCCCCCEEecccccCccCCCccCC-CCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccc-cCCCC
Q 004232 138 IHRLYSLEYLDLSSNFLFGSVPPKIS-TMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSI-QRIST 215 (766)
Q Consensus 138 ~~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~ 215 (766)
+.+..++++|+|++|.|+. + +.++ .+.+|+.|+|++|.++.. + .+..++.|+.|++++|+++. +++.+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l-~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL-E-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc-c-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 5667789999999999973 4 3566 588999999999999853 3 47789999999999999985 54444 46899
Q ss_pred CCEEEccCCccCCC--CCCCCCCCCCCEEECCCCCCC
Q 004232 216 LSDLDLSKNAISGS--LPDLSSLGSLNVLNLSDNKLD 250 (766)
Q Consensus 216 L~~L~Ls~N~l~~~--~p~~~~l~~L~~L~ls~N~l~ 250 (766)
|+.|+|++|++... +..+..+++|++|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 99999999999753 334677899999999998775
No 474
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1.7e-08 Score=95.15 Aligned_cols=132 Identities=21% Similarity=0.324 Sum_probs=94.7
Q ss_pred CceecCCceeEEEEEecCCceEEEEEc-cCCh-------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCL-PSSK-------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l-~~~~-------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..+++|+-+.+|.+.+.+ ..+.+|.- ++.. +-..++..+|..++++++---|---.-|..++.
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~-------- 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD-------- 72 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC--------
Confidence 357899999999998753 34555643 3321 223456788999998875433332223344442
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
...++|||+++-.|.+.+... +..++..+-.-+.-||.. +|+|+||.++||++..+. +.+.|||++
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg 138 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLG 138 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcc
Confidence 468999999999999888643 245666677778889997 999999999999998654 899999998
Q ss_pred ccc
Q 004232 641 IVS 643 (766)
Q Consensus 641 ~~~ 643 (766)
...
T Consensus 139 ~~s 141 (204)
T COG3642 139 EFS 141 (204)
T ss_pred ccc
Confidence 654
No 475
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.89 E-value=1.5e-10 Score=128.76 Aligned_cols=196 Identities=32% Similarity=0.322 Sum_probs=108.8
Q ss_pred cCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 115 ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 115 ~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
..+..++.+++..|.+.. +-..+..+++|+.|+|..|+|.+ +...+..+++|++|+|++|.|+...+ +..++.|+.
T Consensus 69 ~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~ 144 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKE 144 (414)
T ss_pred HHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhh
Confidence 356667777777777754 22346677778888888887763 33336667777777777777765433 455666777
Q ss_pred EEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCC-CCCCCcEEEccCCcCcc
Q 004232 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPK-LPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 195 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~l~ls~N~l~~ 272 (766)
|++++|.++.. ..+..++.|+.+++++|.+...-+. +..+.+|+.+++.+|.+...-.. ....+..+.+..|.++.
T Consensus 145 L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 145 LNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred heeccCcchhc--cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcccchHHHHHHHHhhccccccee
Confidence 77777777632 3445567777777777777643322 46666777777777765422111 01122223444454442
Q ss_pred CCcccccCCC--CCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 273 EIPKQYGQLN--QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 273 ~~p~~~~~l~--~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
.-+. ..+. .|+.+++++|++...+ ..+..+.++..|++.+|++.
T Consensus 223 ~~~l--~~~~~~~L~~l~l~~n~i~~~~-~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 223 LEGL--NELVMLHLRELYLSGNRISRSP-EGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ccCc--ccchhHHHHHHhcccCcccccc-ccccccccccccchhhcccc
Confidence 2111 1111 2455555555554432 22334444555555555544
No 476
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.86 E-value=5.5e-10 Score=124.18 Aligned_cols=198 Identities=30% Similarity=0.359 Sum_probs=151.7
Q ss_pred ccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCC
Q 004232 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (766)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (766)
..+..+++|..|++..|.|.++.. .+..+++|++|+|++|.|+... .+..++.|+.|++++|.++. -..+..+++
T Consensus 89 ~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~ 163 (414)
T KOG0531|consen 89 NHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKS 163 (414)
T ss_pred cccccccceeeeeccccchhhccc-chhhhhcchheecccccccccc--chhhccchhhheeccCcchh--ccCCccchh
Confidence 458889999999999999976543 3788999999999999997543 47778889999999999974 345667999
Q ss_pred CCEEEccCccCCCCCC-ccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CC-CCcEEEccC
Q 004232 192 LTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL--PR-GLVMAFLSN 267 (766)
Q Consensus 192 L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~--~~-~l~~l~ls~ 267 (766)
|+.+++++|+++..-+ . ...+.+|+.+++.+|.+. .+..+..+..+..+++..|.++..-+.- .. .+..+++++
T Consensus 164 L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~-~i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~ 241 (414)
T KOG0531|consen 164 LKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR-EIEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSG 241 (414)
T ss_pred hhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh-cccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhccc
Confidence 9999999999985444 2 577899999999999987 3444555556666688888886432211 11 278889999
Q ss_pred CcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 268 NSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 268 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
|.+.. ++..+..+.++..|++++|++...-. +...+.+..+.+..|.+.
T Consensus 242 n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 242 NRISR-SPEGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKLA 290 (414)
T ss_pred Ccccc-ccccccccccccccchhhcccccccc--ccccchHHHhccCcchhc
Confidence 99873 33667788999999999999987643 344556667777777665
No 477
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.82 E-value=2.2e-08 Score=110.84 Aligned_cols=160 Identities=21% Similarity=0.299 Sum_probs=111.6
Q ss_pred ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC
Q 004232 504 LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP 583 (766)
Q Consensus 504 ~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~ 583 (766)
..++.+|.|...+..........++-++.|+.+|||||++++......+ .+|+|+|-+. -|..++.+..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~--------~~ylvTErV~--Pl~~~lk~l~- 102 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG--------TLYLVTERVR--PLETVLKELG- 102 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC--------ceEEEeeccc--cHHHHHHHhH-
Confidence 4468888888876655444455677788999999999999998776653 6899999764 3555554422
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccc-cc-----CCCCCC
Q 004232 584 GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV-GG-----KQEDPN 657 (766)
Q Consensus 584 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~-~~-----~~~~~~ 657 (766)
-....-.+.||+.||.|||+.+ .++|+++.-..|.+++.|+-||++|-+....+..... .. ....|.
T Consensus 103 -----~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 103 -----KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPE 175 (690)
T ss_pred -----HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChh
Confidence 2233445778999999999876 7899999999999999999999998775332221110 00 001111
Q ss_pred cccCCCCCCCEeehhHHHHHHhcC
Q 004232 658 SWEMTKLEDDVFSFGFMLLESVAG 681 (766)
Q Consensus 658 ~~~~~~~~~DV~SfGvil~ElltG 681 (766)
.....+...|.|-|||++||++.|
T Consensus 176 ~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hcCccccchhhhhHHHHHHHHhCc
Confidence 111111235999999999999999
No 478
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.82 E-value=4.9e-08 Score=91.51 Aligned_cols=143 Identities=22% Similarity=0.242 Sum_probs=100.8
Q ss_pred cCCceecCCceeEEEEEecCCceEEEEEccC-C-------hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPS-S-------KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~-~-------~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
....+-+|+-+.|+++.+. |+...||.-.. . .+-..++.++|++.+.+++--.|---.-++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~------ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY------ 83 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC------
Confidence 4568899999999999875 67766775432 2 1233567888999999876444433333444443
Q ss_pred cceEEEEEEccCC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC---cEEE
Q 004232 559 VNKVFLVYEFMSN-GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR---IAKL 634 (766)
Q Consensus 559 ~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl 634 (766)
.-.|+|||+++ -++.+++....... ..-......+..|-+.+.-||.. +++|+||.++||+|..++ .+-+
T Consensus 84 --~~~i~ME~~~g~~~vk~~i~~~~~~~-~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~l 157 (229)
T KOG3087|consen 84 --GGQIYMEFIDGASTVKDFILSTMEDE-SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPIL 157 (229)
T ss_pred --CCeEEEEeccchhHHHHHHHHHccCc-ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEE
Confidence 23799999987 46788876543221 12222356778888999999998 899999999999997654 4689
Q ss_pred ecCCCCcc
Q 004232 635 SDYGLSIV 642 (766)
Q Consensus 635 ~DFGla~~ 642 (766)
.|||++..
T Consensus 158 Idfgls~~ 165 (229)
T KOG3087|consen 158 IDFGLSSV 165 (229)
T ss_pred Eeecchhc
Confidence 99999844
No 479
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.77 E-value=4.4e-10 Score=114.42 Aligned_cols=238 Identities=21% Similarity=0.259 Sum_probs=148.0
Q ss_pred ccccCCCCCCEEeccccccccc----CCccccCCCCCCEEecccccCccC----CCc-------cCCCCCCCCEEEccCC
Q 004232 112 TTLARLTSLRVLSLVSLGIWGS----LPDKIHRLYSLEYLDLSSNFLFGS----VPP-------KISTMVKLQTLILDDN 176 (766)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~L~~L~~L~Ls~N~l~~~----~p~-------~~~~l~~L~~L~L~~N 176 (766)
+.+..+..++.|+|++|.|.-. +-..+.+.++|+.-++|. -++|. +|+ .+-.+++|+.|+||+|
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDN 102 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDN 102 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccc
Confidence 3456677788888888887432 444567777888888874 33443 232 3445667888888888
Q ss_pred cCCCCCCcc----cCCCCCCCEEEccCccCCCCCCc-------------cccCCCCCCEEEccCCccCCCCC-----CCC
Q 004232 177 FFNNTIPNW----FDSLPSLTFLSMRNNKLAGPFPS-------------SIQRISTLSDLDLSKNAISGSLP-----DLS 234 (766)
Q Consensus 177 ~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p~-------------~~~~l~~L~~L~Ls~N~l~~~~p-----~~~ 234 (766)
-|.-.-+.. +.++..|++|.|.+|.+.-.--. -..+-+.|+++..+.|++..... .+.
T Consensus 103 A~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~ 182 (382)
T KOG1909|consen 103 AFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQ 182 (382)
T ss_pred ccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHH
Confidence 776444433 35677788888888776411111 12233455666666665542211 133
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCC----ccccCCCCCCCe
Q 004232 235 SLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMP----PPAIFSLPNISD 310 (766)
Q Consensus 235 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~ 310 (766)
..+.|+.+.++.|.+... -. ..+...|..+++|+.|||..|-|+..- ...+..+++|+.
T Consensus 183 ~~~~leevr~~qN~I~~e----------------G~-~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~E 245 (382)
T KOG1909|consen 183 SHPTLEEVRLSQNGIRPE----------------GV-TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRE 245 (382)
T ss_pred hccccceEEEecccccCc----------------hh-HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhee
Confidence 445555555555544210 00 013345678888999999999887432 234567788999
Q ss_pred EEeecCcCcccCCccC-----CCCCCccEEeCcCCcccc----CCCCCCCCCCCCceeecCCCcCC
Q 004232 311 LNLASNKFSGSLPKNL-----NCGGKLVFFDISNNKLTG----GLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 311 L~L~~N~l~g~~p~~~-----~~~~~L~~L~ls~N~l~g----~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
|+++++.+...-...+ ...++|+.+.+.+|.++- .+-.++...+.|..|++++|.+.
T Consensus 246 l~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 246 LNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 9999988864322221 235688999999998863 23445667888999999999884
No 480
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.75 E-value=5.8e-09 Score=82.08 Aligned_cols=57 Identities=35% Similarity=0.378 Sum_probs=21.1
Q ss_pred CCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCC
Q 004232 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDN 176 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 176 (766)
|++|+|++|++....++.|.++++|++|++++|.+....|..|.++++|++|++++|
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 333333333333333333333333333333333333333333333333333333333
No 481
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.75 E-value=1.1e-08 Score=112.14 Aligned_cols=243 Identities=17% Similarity=0.156 Sum_probs=156.6
Q ss_pred HHhcCCCcCCceecCCceeEEEEEe--cCCceEEEEEccCChhhhHHH--HHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSKKYTVRN--LKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~--~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
..+.+|.+...||.|.|+.|++... .++..+++|.+...-.....+ -..|+-+...+ .|.++++++..+..-
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~--- 338 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQL--- 338 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccc---
Confidence 4567888899999999999999874 367788998876543222111 22344444444 588888876554443
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAK 633 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~k 633 (766)
.+.|+--||+++++....+.- ...++...++++..+++.++.++|+. .++|+|+||+||++..+ +..+
T Consensus 339 -----r~~~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 339 -----RQGYIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred -----ccccCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhh
Confidence 256789999999998765421 12366677888999999999999985 88999999999999876 8899
Q ss_pred EecCCCCcccccc--cccccCC-----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 634 LSDYGLSIVSEDI--NSVGGKQ-----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 634 l~DFGla~~~~~~--~~~~~~~-----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
+.|||++....-. ....... +....-..+-.++|+||||.-+.|.++|..-....... . .+. .+...
T Consensus 408 ~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-~----~i~-~~~~p 481 (524)
T KOG0601|consen 408 LGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-L----TIR-SGDTP 481 (524)
T ss_pred ccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-e----eee-ccccc
Confidence 9999998531110 0001111 11111123345789999999999999996543221111 0 000 00000
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
. ..... .+...+++.-...++..||.+.+...+.+.
T Consensus 482 ~-------~~~~~---~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 482 N-------LPGLK---LQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred C-------CCchH---HhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 0 00001 224456677788999999999887766543
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.74 E-value=6.9e-09 Score=81.64 Aligned_cols=61 Identities=39% Similarity=0.554 Sum_probs=57.1
Q ss_pred CCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccC
Q 004232 142 YSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKL 202 (766)
Q Consensus 142 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 202 (766)
++|++|+|++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999977778999999999999999999988889999999999999999985
No 483
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.68 E-value=2.3e-08 Score=109.73 Aligned_cols=237 Identities=19% Similarity=0.202 Sum_probs=146.9
Q ss_pred CCcCCceec--CCceeEEEEEe---cCCceEEEEEccC--ChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCC
Q 004232 485 FDMSAIMGE--GSYGKLYKGRL---ENGTSVAIRCLPS--SKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 485 f~~~~~lG~--G~fg~Vy~~~~---~~g~~vAvK~l~~--~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~ 556 (766)
|.....+|+ |.+|.||.++. +++..+|+|+-+. ........=.+|.....++ .|+|.|+....+...+
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~---- 191 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG---- 191 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC----
Confidence 455678899 99999999986 4688899987332 2122222334455555566 4999999776666543
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCCCcccCCCCCCceEEcCC-Cc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAK----AVQFLHTGVIPGFFNNRVKTNNILLNEH-RI 631 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrdlk~~NILld~~-~~ 631 (766)
..++-+|++. .++..+.+... ..+.......+..+... |+.++|.. .++|-|+||.||.+..+ ..
T Consensus 192 ----~lfiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s 261 (524)
T KOG0601|consen 192 ----ILFIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTS 261 (524)
T ss_pred ----cceeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccce
Confidence 5678888776 68888776432 22333444555555555 99999997 89999999999999988 78
Q ss_pred EEEecCCCCccccccccccc-----C-CCCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccC-ccchHHHHhh
Q 004232 632 AKLSDYGLSIVSEDINSVGG-----K-QEDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARK-GQFLQEELDS 698 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~~-----~-~~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~-~~~~~~~~~~ 698 (766)
.+.+|||+.....+...... . .....+ ...++..+|+||+|.+..|..+|....... ... |..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~----W~~ 337 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS----WSQ 337 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC----ccc
Confidence 99999998754433221110 0 011111 122345679999999999999986554321 011 111
Q ss_pred hhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 699 LNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 699 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
........++.++ ... .+-......++.+|..|++...+..
T Consensus 338 ~r~~~ip~e~~~~-----~s~----~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 LRQGYIPLEFCEG-----GSS----SLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccccCchhhhcC-----cch----hhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1100001111111 111 1222567788999999998876654
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.66 E-value=1.3e-08 Score=120.91 Aligned_cols=109 Identities=27% Similarity=0.341 Sum_probs=71.7
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
.|..++.|++|||++|.=.+.+|+.+++|-+|++|||++..+. .+|..+.+|.+|.+|++..+.....+|.....|++|
T Consensus 566 ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~L 644 (889)
T KOG4658|consen 566 FFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSL 644 (889)
T ss_pred HHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccc
Confidence 3666777777777776666777777777777777777777775 677777777777777777776655666666667777
Q ss_pred CEEEccCcc--CCCCCCccccCCCCCCEEEcc
Q 004232 193 TFLSMRNNK--LAGPFPSSIQRISTLSDLDLS 222 (766)
Q Consensus 193 ~~L~L~~N~--l~~~~p~~~~~l~~L~~L~Ls 222 (766)
++|.+..-. .....-..+.++.+|+.|...
T Consensus 645 r~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 645 RVLRLPRSALSNDKLLLKELENLEHLENLSIT 676 (889)
T ss_pred cEEEeeccccccchhhHHhhhcccchhhheee
Confidence 777775543 122222334455555555443
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.66 E-value=1.2e-08 Score=121.23 Aligned_cols=247 Identities=20% Similarity=0.210 Sum_probs=152.3
Q ss_pred CCCCCEEeccccc--ccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 117 LTSLRVLSLVSLG--IWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 117 l~~L~~L~L~~n~--l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
.++|++|-+..|. +....++.|..++.|++||||+|.--+.+|..+++|-+|++|+|++..+. .+|..+++|..|.+
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIY 622 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhe
Confidence 4478899888886 44444455888999999999998877889999999999999999999988 78999999999999
Q ss_pred EEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC---CCCCCCCCCEEECCCCCCCCCCCC------CCCCCcEEEc
Q 004232 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP---DLSSLGSLNVLNLSDNKLDSNLPK------LPRGLVMAFL 265 (766)
Q Consensus 195 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~l~~L~~L~ls~N~l~~~~p~------~~~~l~~l~l 265 (766)
|++..+.-...+|.....|++|++|.+.........- .+.+|.+|+.+....... ..+-. +....+.+.+
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~-~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV-LLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh-HhHhhhhhhHHHHHHhHhhhh
Confidence 9999988766777777889999999997765332211 244555555555433222 00011 1111222332
Q ss_pred cCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCC------CCCCCeEEeecCcCcccCCccCCCCCCccEEeCcC
Q 004232 266 SNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFS------LPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (766)
Q Consensus 266 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~ 339 (766)
.++... ..+..++.+.+|+.|.+.+............. ++++..+...+...- ..+....-.++|+.|++..
T Consensus 702 ~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~ 779 (889)
T KOG4658|consen 702 EGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVS 779 (889)
T ss_pred cccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEec
Confidence 232222 34566778889999998888876443322111 112222211111110 1122223346778888876
Q ss_pred CccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 340 NKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 340 N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
......+.+....+..+..+.+..+.+.
T Consensus 780 ~~~~e~~i~~~k~~~~l~~~i~~f~~~~ 807 (889)
T KOG4658|consen 780 CRLLEDIIPKLKALLELKELILPFNKLE 807 (889)
T ss_pred ccccccCCCHHHHhhhcccEEecccccc
Confidence 6554444444333443443334444443
No 486
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.58 E-value=5e-07 Score=88.04 Aligned_cols=124 Identities=15% Similarity=0.264 Sum_probs=78.3
Q ss_pred eEEEEEecCCceEEEEEccCCh--------------h------------hhHHHHHHHHHHHHhCCCCC--cccccceee
Q 004232 498 KLYKGRLENGTSVAIRCLPSSK--------------K------------YTVRNLKLRLDLLAKLRHPH--LVCLLGHCI 549 (766)
Q Consensus 498 ~Vy~~~~~~g~~vAvK~l~~~~--------------~------------~~~~~~~~e~~~l~~l~Hpn--iv~l~g~~~ 549 (766)
.||.|...+|..||||..+... . ......++|.+.|.++..-. +-+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899998899999999875421 0 01234677999999997653 3444433
Q ss_pred cCCCCCCcCcceEEEEEEccC--CCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCCCcccCCCCCCceEE
Q 004232 550 DGGGRDDYAVNKVFLVYEFMS--NGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFL-HTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 550 ~~~~~~~~~~~~~~lv~Ey~~--~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrdlk~~NILl 626 (766)
. .-++||||++ +..+.. +.... ++......++.++...+..+ |.. +++|+||.+.||++
T Consensus 79 ~----------~~~ivME~I~~~G~~~~~-l~~~~----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv 140 (188)
T PF01163_consen 79 N----------RNVIVMEYIGEDGVPLPR-LKDVD----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILV 140 (188)
T ss_dssp E----------TTEEEEE--EETTEEGGC-HHHCG----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEE
T ss_pred e----------CCEEEEEecCCCccchhh-HHhcc----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEe
Confidence 1 2389999999 544544 33221 11223445666777766665 565 89999999999999
Q ss_pred cCCCcEEEecCCCCcc
Q 004232 627 NEHRIAKLSDYGLSIV 642 (766)
Q Consensus 627 d~~~~~kl~DFGla~~ 642 (766)
+++ .+.|.|||-+..
T Consensus 141 ~~~-~~~iIDf~qav~ 155 (188)
T PF01163_consen 141 DDG-KVYIIDFGQAVD 155 (188)
T ss_dssp ETT-CEEE--GTTEEE
T ss_pred ecc-eEEEEecCccee
Confidence 987 999999998743
No 487
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.49 E-value=3.6e-06 Score=87.12 Aligned_cols=144 Identities=12% Similarity=0.061 Sum_probs=97.0
Q ss_pred ceecCCceeEEEEEecCCceEEEEEccCChhh-hH----------HHHHHHHHHHHhCCCCC--cccccceeecCCCCCC
Q 004232 490 IMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY-TV----------RNLKLRLDLLAKLRHPH--LVCLLGHCIDGGGRDD 556 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~----------~~~~~e~~~l~~l~Hpn--iv~l~g~~~~~~~~~~ 556 (766)
.+-+.....|++..+ +|+.+.||........ .. ..+.+|...+.++...+ ....+++.....+
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~--- 104 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN--- 104 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC---
Confidence 344333445777766 4778999976443211 11 13678888877774333 3444555543210
Q ss_pred cCcceEEEEEEccCCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-------
Q 004232 557 YAVNKVFLVYEFMSNG-NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE------- 628 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------- 628 (766)
.....-++|+|++++- +|.+++.+... ...+...+..++.+++..++-||.. +|+|+|++++|||++.
T Consensus 105 ~~~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~ 180 (268)
T PRK15123 105 PATRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREE 180 (268)
T ss_pred CccceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCC
Confidence 0112468999999986 79888754211 2244566778899999999999998 9999999999999985
Q ss_pred CCcEEEecCCCCc
Q 004232 629 HRIAKLSDYGLSI 641 (766)
Q Consensus 629 ~~~~kl~DFGla~ 641 (766)
++.+.+.||+.+.
T Consensus 181 ~~~~~LIDl~r~~ 193 (268)
T PRK15123 181 DLKLSVIDLHRAQ 193 (268)
T ss_pred CceEEEEECCccc
Confidence 4689999999874
No 488
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.41 E-value=3.1e-08 Score=101.21 Aligned_cols=205 Identities=24% Similarity=0.294 Sum_probs=125.7
Q ss_pred cccCCCCCCEEecccccccc----cCCc-------cccCCCCCCEEecccccCccCCCc----cCCCCCCCCEEEccCCc
Q 004232 113 TLARLTSLRVLSLVSLGIWG----SLPD-------KIHRLYSLEYLDLSSNFLFGSVPP----KISTMVKLQTLILDDNF 177 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~----~~p~-------~~~~L~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~ 177 (766)
.+.+.++|+.-++++- ++| .+|+ ++...++|++||||.|-|...-+. .+..++.|++|.|.+|.
T Consensus 53 ~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~G 131 (382)
T KOG1909|consen 53 VLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCG 131 (382)
T ss_pred HHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCC
Confidence 4555556666666542 222 2333 334555777777777776433332 24456777777777776
Q ss_pred CCCCC-------------CcccCCCCCCCEEEccCccCCCC----CCccccCCCCCCEEEccCCccCC--C---CCCCCC
Q 004232 178 FNNTI-------------PNWFDSLPSLTFLSMRNNKLAGP----FPSSIQRISTLSDLDLSKNAISG--S---LPDLSS 235 (766)
Q Consensus 178 l~~~~-------------p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~--~---~p~~~~ 235 (766)
+.-.- -.-.++-++|+++...+|++... +...|...+.|+.+.++.|.+.. . ...+..
T Consensus 132 lg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~ 211 (382)
T KOG1909|consen 132 LGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEH 211 (382)
T ss_pred CChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHh
Confidence 64110 11133456788888888877532 12245566778888888877641 1 012566
Q ss_pred CCCCCEEECCCCCCCCC--------CCCCCCCCcEEEccCCcCccCCcccc-----cCCCCCCEEEccCCcCCCC----C
Q 004232 236 LGSLNVLNLSDNKLDSN--------LPKLPRGLVMAFLSNNSFSGEIPKQY-----GQLNQLQQLDMSFNALRGM----P 298 (766)
Q Consensus 236 l~~L~~L~ls~N~l~~~--------~p~~~~~l~~l~ls~N~l~~~~p~~~-----~~l~~L~~L~ls~N~l~~~----~ 298 (766)
+++|++|||.+|-|+.. +|.++ .|+.++++++.++..=...| ...++|+.|.|.+|.++.. +
T Consensus 212 ~~~LevLdl~DNtft~egs~~LakaL~s~~-~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~l 290 (382)
T KOG1909|consen 212 CPHLEVLDLRDNTFTLEGSVALAKALSSWP-HLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALAL 290 (382)
T ss_pred CCcceeeecccchhhhHHHHHHHHHhcccc-hheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHH
Confidence 77888888888877532 23333 67777787777764322222 2468999999999998743 2
Q ss_pred ccccCCCCCCCeEEeecCcCc
Q 004232 299 PPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 299 ~~~~~~l~~L~~L~L~~N~l~ 319 (766)
...+...+.|..|+|++|.+.
T Consensus 291 a~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 291 AACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HHHHhcchhhHHhcCCccccc
Confidence 234556889999999999994
No 489
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.38 E-value=2.1e-06 Score=92.49 Aligned_cols=170 Identities=16% Similarity=0.237 Sum_probs=118.6
Q ss_pred eeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEEEccCC-CCh
Q 004232 497 GKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSN-GNF 574 (766)
Q Consensus 497 g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~-GsL 574 (766)
.+-||+.. .+|..++.|++...+.........-++.++++.|+|+|++..++.... +...-+++||+|.|+ ++|
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t----F~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT----FGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc----cCcceEEEEEecCCCCchH
Confidence 46888874 479999999995433222212223466889999999999999887321 122468999999986 667
Q ss_pred hhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 575 RTHISENTP------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 575 ~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
.++-....+ +........+.++.|+..||.++|+. |..-+-|.+.+||++.+.+++|+.-|...+
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 664322111 12356677889999999999999997 777799999999999998888887776544
Q ss_pred cccccccccCCCCCCcccCCCCCCCEeehhHHHHHHhcCC
Q 004232 643 SEDINSVGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGP 682 (766)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~ 682 (766)
..... ..+ -....+-|.=.||.+++-|.||.
T Consensus 443 l~~d~------~~~---le~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 443 LQEDP------TEP---LESQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred ecCCC------Ccc---hhHHhhhhHHHHHHHHHHHhhcc
Confidence 32211 000 01112458888999999999984
No 490
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.34 E-value=7.3e-07 Score=64.32 Aligned_cols=39 Identities=33% Similarity=0.617 Sum_probs=28.8
Q ss_pred hHHHHHHHHHHHcCCC-C-CCCCCccCCC-CCCCCCCCCCccceEec
Q 004232 28 SSQTQVLLQLRKHLEY-P-KQLEIWINHG-ADFCYISSSTQVNITCQ 71 (766)
Q Consensus 28 ~~~~~aLl~~k~~~~~-~-~~l~~W~~~~-~~~C~~~~~~~~gv~C~ 71 (766)
++|++||++||+++.+ | ..+++|+.++ .+||+|. ||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~-----GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWS-----GVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCST-----TEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeec-----cEEeC
Confidence 5799999999999984 5 5899998763 6999985 69994
No 491
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.26 E-value=8.1e-06 Score=81.91 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=87.3
Q ss_pred CcCCceecCCceeEEEEEecCCceEEEEEccCChh----------------------hhHHHHHHHHHHHHhCCCC--Cc
Q 004232 486 DMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK----------------------YTVRNLKLRLDLLAKLRHP--HL 541 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----------------------~~~~~~~~e~~~l~~l~Hp--ni 541 (766)
.+...||-|.-+.||.|..+.|.++|||.=..... ..+...++|.++|.++.-. .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 45688999999999999999999999996432110 1133456788888887533 33
Q ss_pred ccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHH-HHHHHHHHHhcCCCCCcccCCCC
Q 004232 542 VCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLI-GVAKAVQFLHTGVIPGFFNNRVK 620 (766)
Q Consensus 542 v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~-~ia~gL~yLH~~~~~~ivHrdlk 620 (766)
-+.++ .+.-.+||||+++-.|...=- ..-.....+..+. .+..+ | + . ++||+|+.
T Consensus 174 P~P~~------------~nRHaVvMe~ieG~eL~~~r~-----~~en~~~il~~il~~~~~~--~-~-~---GiVHGDlS 229 (304)
T COG0478 174 PKPIA------------WNRHAVVMEYIEGVELYRLRL-----DVENPDEILDKILEEVRKA--Y-R-R---GIVHGDLS 229 (304)
T ss_pred CCccc------------cccceeeeehcccceeecccC-----cccCHHHHHHHHHHHHHHH--H-H-c---CccccCCc
Confidence 33332 245689999999976654210 0112333333332 23322 2 3 2 89999999
Q ss_pred CCceEEcCCCcEEEecCCC
Q 004232 621 TNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 621 ~~NILld~~~~~kl~DFGl 639 (766)
.-||+++++|.+.+.||--
T Consensus 230 efNIlV~~dg~~~vIDwPQ 248 (304)
T COG0478 230 EFNILVTEDGDIVVIDWPQ 248 (304)
T ss_pred hheEEEecCCCEEEEeCcc
Confidence 9999999999999999943
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.25 E-value=1e-08 Score=113.04 Aligned_cols=176 Identities=28% Similarity=0.344 Sum_probs=115.1
Q ss_pred CccccCCCCCCEEecccccCccCCCccCCCC-CCCCEEEccCCcCC----------CCCCcccCCCCCCCEEEccCccCC
Q 004232 135 PDKIHRLYSLEYLDLSSNFLFGSVPPKISTM-VKLQTLILDDNFFN----------NTIPNWFDSLPSLTFLSMRNNKLA 203 (766)
Q Consensus 135 p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~----------~~~p~~~~~l~~L~~L~L~~N~l~ 203 (766)
|-.|..+.+|+.|.|.++.|.. . ..+..+ ..|++|.-+ |.+. |.+...+ ....|.+.+.++|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns~-~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNSP-VWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccch-hhhhHhhhhcchhhHH
Confidence 5567777888888888877752 1 111111 123333222 2111 1111111 1236777788888887
Q ss_pred CCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCccCCcccccC
Q 004232 204 GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSGEIPKQYGQ 280 (766)
Q Consensus 204 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~~~~p~~~~~ 280 (766)
.+..++.-++.|+.|||++|+++.. ..+..|+.|++|||++|.++- +|.+ ...|..|.++||.++.. ..+.+
T Consensus 178 -~mD~SLqll~ale~LnLshNk~~~v-~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~L~~L~lrnN~l~tL--~gie~ 252 (1096)
T KOG1859|consen 178 -LMDESLQLLPALESLNLSHNKFTKV-DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGCKLQLLNLRNNALTTL--RGIEN 252 (1096)
T ss_pred -hHHHHHHHHHHhhhhccchhhhhhh-HHHHhcccccccccccchhcc-ccccchhhhhheeeeecccHHHhh--hhHHh
Confidence 5667777788888888888888743 367778888888888888864 3332 23478888888887642 35678
Q ss_pred CCCCCEEEccCCcCCCCCc-cccCCCCCCCeEEeecCcCc
Q 004232 281 LNQLQQLDMSFNALRGMPP-PAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 281 l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 319 (766)
+.+|+.||+++|-|.+.-. .-+..+..|+.|+|.+|.+.
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 8999999999998876432 12455778899999999885
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.20 E-value=1.8e-08 Score=111.18 Aligned_cols=125 Identities=32% Similarity=0.355 Sum_probs=90.7
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCc-ccCCCCCCCEEEc
Q 004232 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPN-WFDSLPSLTFLSM 197 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L 197 (766)
.|.+.+.++|.+. .+..++.-++.|+.||||+|+++.. +.+..|++|++|||++|.+.. +|. ....+. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~-vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH-VPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc-ccccchhhhh-heeeee
Confidence 4666777777774 3455677788888888888888632 378888888888888888873 332 222333 888888
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCC--CCCCCCCCCCCEEECCCCCCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGS--LPDLSSLGSLNVLNLSDNKLD 250 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~l~~L~~L~ls~N~l~ 250 (766)
++|.++.. ..+.+|.+|+.|||++|-|++. +..++.|..|+.|+|.+|.+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 88888643 3467888888889998888753 234667778888888888774
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=2e-07 Score=93.08 Aligned_cols=87 Identities=26% Similarity=0.308 Sum_probs=57.8
Q ss_pred CCCCCCEEecccccccc--cCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCC-CCcccCCCCCC
Q 004232 116 RLTSLRVLSLVSLGIWG--SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNT-IPNWFDSLPSL 192 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~--~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L 192 (766)
..+.++.|||.+|.|+. .+-..+.+|+.|++|+||.|.+...|-..-..+.+|+.|.|.+..+.-. ....+..+|.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 45677888888888753 3444567888888888888888754432224566788888877766532 22345567777
Q ss_pred CEEEccCccC
Q 004232 193 TFLSMRNNKL 202 (766)
Q Consensus 193 ~~L~L~~N~l 202 (766)
+.|+++.|++
T Consensus 149 telHmS~N~~ 158 (418)
T KOG2982|consen 149 TELHMSDNSL 158 (418)
T ss_pred hhhhhccchh
Confidence 7777777643
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.13 E-value=5.4e-08 Score=86.38 Aligned_cols=104 Identities=29% Similarity=0.369 Sum_probs=50.9
Q ss_pred CCEEecccccccccCCccc---cCCCCCCEEecccccCccCCCccCCCC-CCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 120 LRVLSLVSLGIWGSLPDKI---HRLYSLEYLDLSSNFLFGSVPPKISTM-VKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~---~~L~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
+..|+|+++.+ +.+++.. .....|+..+|++|.+. .+|+.|... +-++.|+|++|.++ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~l-m~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQL-MYIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchh-hHHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 44566666655 2334433 23334444566666654 344444322 24555555555554 344445555555555
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccC
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAIS 227 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 227 (766)
+++.|.+. ..|..+..|.+|..||..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 55555554 34444444555555555555443
No 496
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.08 E-value=1.1e-06 Score=101.57 Aligned_cols=239 Identities=14% Similarity=0.182 Sum_probs=136.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|.+.+-+-+|.++.++-+.- ..|...++|...... ..+.+...++-.++-..+||-++...--+..
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~------- 875 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPC------- 875 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCC-------
Confidence 34566666778899999987752 234333444333221 2222333333334444456766654332111
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
....+||++|..+|+|...++.... .+-.-.......+..+.+|||.. .+.|||++|.|+++..+++.+++||
T Consensus 876 -rsP~~L~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~ 948 (1205)
T KOG0606|consen 876 -RSPLPLVGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDF 948 (1205)
T ss_pred -CCCcchhhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcc
Confidence 1357999999999999999886542 22222233445577889999996 4799999999999999999999999
Q ss_pred CCCcccccc---ccc------cc--------------C---------CCCCCcc-------cCCCCCCCEeehhHHHHHH
Q 004232 638 GLSIVSEDI---NSV------GG--------------K---------QEDPNSW-------EMTKLEDDVFSFGFMLLES 678 (766)
Q Consensus 638 Gla~~~~~~---~~~------~~--------------~---------~~~~~~~-------~~~~~~~DV~SfGvil~El 678 (766)
|........ ... +. . .+.+.+. ......+|+|++|++++|.
T Consensus 949 ~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~ 1028 (1205)
T KOG0606|consen 949 GTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEV 1028 (1205)
T ss_pred ccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhh
Confidence 943211100 000 00 0 0000000 1122357999999999999
Q ss_pred hcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 004232 679 VAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFE 744 (766)
Q Consensus 679 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ 744 (766)
++|.+|+.... -...+..+... .+..|. .+.+.-..+.+++.+-+..+|.+|-.|.
T Consensus 1029 l~g~pp~na~t--pq~~f~ni~~~----~~~~p~----g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1029 LTGIPPFNAET--PQQIFENILNR----DIPWPE----GPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hcCCCCCCCcc--hhhhhhccccC----CCCCCC----CccccChhhhhhhhhhhccCchhccCcc
Confidence 99999986322 22222222111 111111 1111112244566677778888886654
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.01 E-value=4.6e-05 Score=85.56 Aligned_cols=145 Identities=16% Similarity=0.236 Sum_probs=89.0
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhh------------------------------H----H----
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYT------------------------------V----R---- 524 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~------------------------------~----~---- 524 (766)
..|+. .-|+.++-|.||+|++.+|+.||||+....-... . +
T Consensus 126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 34543 5789999999999999999999999986531100 0 1
Q ss_pred --HHHHHHHHHHhC----CCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHH
Q 004232 525 --NLKLRLDLLAKL----RHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIG 598 (766)
Q Consensus 525 --~~~~e~~~l~~l----~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ 598 (766)
++.+|..-+.++ ++.-=+.+-.+|++-. ....|+|||++|-.+.+...-...+ .+ +..++..
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t-------~~~VLtmE~i~Gi~i~d~~~l~~~g--~d---~k~ia~~ 272 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYT-------TRRVLTMEWIDGIKISDIAALKSAG--ID---RKELAEL 272 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhcc-------CCcEEEEEeeCCEecccHHHHHhcC--CC---HHHHHHH
Confidence 122333333333 2222233333444322 2458999999998888763222111 33 2223333
Q ss_pred HHHHH-HHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 599 VAKAV-QFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 599 ia~gL-~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
++++. .-+-.. +++|.|..|-||+++.++..-.-|||+....
T Consensus 273 ~~~~f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 273 LVRAFLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HHHHHHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecC
Confidence 22222 111112 7899999999999999999999999997443
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.01 E-value=5.4e-05 Score=75.64 Aligned_cols=109 Identities=19% Similarity=0.221 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHhCC--CCCcccccceeecCCCCCCcCcceEEEEEEccCCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHH
Q 004232 524 RNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNG-NFRTHISENTPGKVLNWSERLAVLIGVA 600 (766)
Q Consensus 524 ~~~~~e~~~l~~l~--Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia 600 (766)
....+|...+.++. .=.+.+.+++.....+. ....++|+|++++- +|.+++..... .+...+..++.+++
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~----~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~ 128 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGG----GYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALA 128 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC----ceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHH
Confidence 35667777666664 33345566666553221 13568999999984 79988875322 44556778899999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCceEEcCCC---cEEEecCCCCcc
Q 004232 601 KAVQFLHTGVIPGFFNNRVKTNNILLNEHR---IAKLSDYGLSIV 642 (766)
Q Consensus 601 ~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~DFGla~~ 642 (766)
+.++-||.. +|+|+|+++.|||++.+. .+.+.||+-++.
T Consensus 129 ~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 129 RLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999998 999999999999999776 789999987644
No 499
>PRK09902 hypothetical protein; Provisional
Probab=98.00 E-value=9.2e-05 Score=72.77 Aligned_cols=141 Identities=12% Similarity=0.058 Sum_probs=99.1
Q ss_pred eecCCceeEEEEEecCCceEEEEEccCCh------hhhHHHHHHHHHHHHhCCCCC--cccccceeecCCCCCCcCcceE
Q 004232 491 MGEGSYGKLYKGRLENGTSVAIRCLPSSK------KYTVRNLKLRLDLLAKLRHPH--LVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 491 lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~------~~~~~~~~~e~~~l~~l~Hpn--iv~l~g~~~~~~~~~~~~~~~~ 562 (766)
-|+||.+-|++-.+. |..+=+|+-...- +.....|.+|...+.++..-+ +.+.+ ++.... ....-..
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k---~~~~~rA 100 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVK---IEGEWRA 100 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeec---cCCceEE
Confidence 478999999998765 4467788765221 223567889998888875322 33333 332110 1112357
Q ss_pred EEEEEccCC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc--EEEecCCC
Q 004232 563 FLVYEFMSN-GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--AKLSDYGL 639 (766)
Q Consensus 563 ~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~kl~DFGl 639 (766)
+||+|-+++ -+|.+++.+... ...+...+..+..+++..++-||+. ++.|+|+-+.||+++.++. +++.||--
T Consensus 101 ~LVTe~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 101 LLVTEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEEEEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 899997774 578888765422 2356677889999999999999998 8999999999999986555 89999965
Q ss_pred C
Q 004232 640 S 640 (766)
Q Consensus 640 a 640 (766)
+
T Consensus 177 ~ 177 (216)
T PRK09902 177 S 177 (216)
T ss_pred c
Confidence 4
No 500
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.96 E-value=3.1e-05 Score=83.39 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=45.3
Q ss_pred ccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCc-cCCCCCCccccCCCCC
Q 004232 138 IHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN-KLAGPFPSSIQRISTL 216 (766)
Q Consensus 138 ~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L 216 (766)
+..+.+++.|++++|.|. .+|. + -.+|++|.++++.--..+|+.+ .++|++|++++| .+. .+|. +|
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------sL 114 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------SV 114 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------cc
Confidence 555788999999999876 4552 2 2358888887743334555543 246777777776 333 3443 34
Q ss_pred CEEEccCCc
Q 004232 217 SDLDLSKNA 225 (766)
Q Consensus 217 ~~L~Ls~N~ 225 (766)
+.|+++.|.
T Consensus 115 e~L~L~~n~ 123 (426)
T PRK15386 115 RSLEIKGSA 123 (426)
T ss_pred ceEEeCCCC
Confidence 555555444
Done!