Query 004232
Match_columns 766
No_of_seqs 779 out of 5703
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 18:30:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 6.7E-50 2.3E-54 426.9 20.9 253 483-758 41-322 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 3.4E-50 1.2E-54 423.3 17.5 252 483-757 13-291 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 5.3E-49 1.8E-53 416.0 19.5 248 483-753 26-304 (308)
4 3omv_A RAF proto-oncogene seri 100.0 5E-48 1.7E-52 406.9 21.0 250 482-754 35-299 (307)
5 3hmm_A TGF-beta receptor type- 100.0 2.2E-47 7.5E-52 404.4 19.4 260 483-756 3-298 (303)
6 4ase_A Vascular endothelial gr 100.0 1E-47 3.6E-52 413.3 15.1 264 473-757 54-349 (353)
7 3fpq_A Serine/threonine-protei 100.0 2.4E-45 8.1E-50 383.7 19.3 244 486-748 29-282 (290)
8 4b9d_A Serine/threonine-protei 100.0 1.1E-45 3.8E-50 394.4 16.5 243 482-748 23-276 (350)
9 4fih_A Serine/threonine-protei 100.0 1.4E-45 4.8E-50 393.1 17.2 242 483-749 74-324 (346)
10 4g3f_A NF-kappa-beta-inducing 100.0 9E-46 3.1E-50 393.4 13.3 244 482-755 57-316 (336)
11 3hyh_A Carbon catabolite-derep 100.0 3.3E-44 1.1E-48 371.8 20.0 239 483-749 13-263 (275)
12 4fie_A Serine/threonine-protei 100.0 2E-44 6.8E-49 393.6 18.2 243 482-749 150-401 (423)
13 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.7E-44 9.4E-49 377.4 15.0 238 483-747 32-283 (311)
14 3ubd_A Ribosomal protein S6 ki 100.0 3.7E-44 1.3E-48 376.5 11.4 234 483-743 24-271 (304)
15 4g31_A Eukaryotic translation 100.0 2.8E-43 9.5E-48 371.2 15.6 250 482-748 4-279 (299)
16 1ogq_A PGIP-2, polygalacturona 100.0 7.9E-42 2.7E-46 364.7 19.9 295 25-368 2-306 (313)
17 3rgz_A Protein brassinosteroid 100.0 1.7E-41 6E-46 405.8 21.7 338 20-369 3-383 (768)
18 2qkw_B Protein kinase; three-h 100.0 6.6E-41 2.3E-45 359.0 18.9 276 473-759 29-319 (321)
19 3uim_A Brassinosteroid insensi 100.0 7.7E-41 2.6E-45 359.2 17.6 278 470-755 17-311 (326)
20 4b99_A Mitogen-activated prote 100.0 3.3E-40 1.1E-44 361.1 22.6 257 483-749 54-345 (398)
21 4f9c_A Cell division cycle 7-r 100.0 1.1E-39 3.6E-44 353.2 17.0 191 479-688 17-250 (361)
22 3uto_A Twitchin; kinase, muscl 100.0 3.8E-39 1.3E-43 369.8 18.4 245 482-748 156-410 (573)
23 2nru_A Interleukin-1 receptor- 100.0 6.8E-38 2.3E-42 333.1 25.2 272 470-754 12-305 (307)
24 3v5w_A G-protein coupled recep 100.0 8.5E-39 2.9E-43 364.3 18.5 242 482-748 188-449 (689)
25 3p86_A Serine/threonine-protei 100.0 2.4E-38 8.3E-43 337.1 20.4 256 481-757 35-300 (309)
26 2psq_A Fibroblast growth facto 100.0 5.4E-38 1.8E-42 343.0 22.0 253 482-757 80-366 (370)
27 3s95_A LIMK-1, LIM domain kina 100.0 1.5E-38 5.1E-43 338.9 16.3 250 483-755 10-282 (310)
28 2qol_A Ephrin receptor; recept 100.0 4E-38 1.4E-42 344.3 18.6 248 483-755 45-309 (373)
29 3cbl_A C-FES, proto-oncogene t 100.0 1.2E-38 4.1E-43 349.3 12.9 249 482-755 113-374 (377)
30 3kul_A Ephrin type-A receptor 100.0 4.9E-38 1.7E-42 337.2 17.4 251 483-758 49-316 (325)
31 3ugc_A Tyrosine-protein kinase 100.0 9.6E-39 3.3E-43 337.8 11.4 253 483-755 10-291 (295)
32 2c30_A Serine/threonine-protei 100.0 2.4E-37 8.2E-42 331.3 21.5 253 472-749 24-295 (321)
33 3fxz_A Serine/threonine-protei 100.0 2E-37 6.7E-42 328.2 20.5 243 482-749 19-270 (297)
34 3soc_A Activin receptor type-2 100.0 1.8E-37 6.1E-42 332.5 20.3 262 482-756 23-319 (322)
35 3fe3_A MAP/microtubule affinit 100.0 2.4E-37 8.2E-42 332.0 20.6 241 482-749 14-265 (328)
36 4hcu_A Tyrosine-protein kinase 100.0 1.5E-37 5.1E-42 324.0 18.0 247 483-755 10-266 (269)
37 1k9a_A Carboxyl-terminal SRC k 100.0 2.6E-37 8.7E-42 346.6 20.9 249 482-756 192-446 (450)
38 4eco_A Uncharacterized protein 100.0 1.1E-37 3.6E-42 364.8 18.5 312 27-367 28-470 (636)
39 4euu_A Serine/threonine-protei 100.0 9.9E-37 3.4E-41 326.2 23.9 267 483-758 9-312 (319)
40 3vhe_A Vascular endothelial gr 100.0 7.2E-38 2.5E-42 340.7 14.4 263 473-756 12-356 (359)
41 1qcf_A Haematopoetic cell kina 100.0 5E-38 1.7E-42 352.9 13.3 252 478-755 183-444 (454)
42 2eva_A TAK1 kinase - TAB1 chim 100.0 5E-37 1.7E-41 326.7 19.8 250 483-755 8-263 (307)
43 4ecn_A Leucine-rich repeat pro 100.0 2.9E-37 9.9E-42 367.9 19.7 330 25-367 265-741 (876)
44 3q4u_A Activin receptor type-1 100.0 7E-37 2.4E-41 324.2 20.0 253 482-753 7-300 (301)
45 3poz_A Epidermal growth factor 100.0 2.2E-37 7.5E-42 332.6 15.5 247 483-755 15-278 (327)
46 3tt0_A Basic fibroblast growth 100.0 1.6E-36 5.3E-41 333.1 22.3 253 482-757 68-354 (382)
47 3gen_A Tyrosine-protein kinase 100.0 2.2E-37 7.5E-42 325.2 14.8 248 482-755 23-280 (283)
48 3l9p_A Anaplastic lymphoma kin 100.0 1.9E-37 6.4E-42 338.4 14.3 253 482-757 70-347 (367)
49 3lb7_A RAF proto-oncogene seri 100.0 1.2E-36 4.1E-41 323.7 19.9 251 482-755 35-300 (307)
50 1luf_A Muscle-specific tyrosin 100.0 4.2E-37 1.4E-41 332.4 16.5 253 480-755 44-335 (343)
51 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.2E-37 7.6E-42 322.4 13.8 247 482-754 7-263 (268)
52 3zgw_A Maternal embryonic leuc 100.0 3.9E-37 1.3E-41 332.3 16.0 241 482-749 9-261 (347)
53 4eqm_A Protein kinase; transfe 100.0 6.5E-37 2.2E-41 323.7 17.3 251 483-755 11-275 (294)
54 3qup_A Tyrosine-protein kinase 100.0 2.5E-37 8.6E-42 331.3 14.2 260 481-757 21-300 (323)
55 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-37 4.8E-42 352.7 12.8 249 482-755 219-478 (495)
56 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.1E-37 7.3E-42 347.4 13.9 251 481-757 182-442 (452)
57 4f0f_A Serine/threonine-protei 100.0 1.6E-36 5.5E-41 319.3 19.1 249 482-752 18-286 (287)
58 1mp8_A Focal adhesion kinase 1 100.0 9.2E-37 3.1E-41 320.3 16.8 249 482-756 14-277 (281)
59 4fvq_A Tyrosine-protein kinase 100.0 6E-37 2.1E-41 322.8 15.3 249 483-757 8-277 (289)
60 3op5_A Serine/threonine-protei 100.0 6.5E-37 2.2E-41 333.9 16.0 262 482-756 34-330 (364)
61 3c1x_A Hepatocyte growth facto 100.0 6.6E-37 2.3E-41 334.4 15.6 248 484-755 90-355 (373)
62 2ivs_A Proto-oncogene tyrosine 100.0 2.7E-36 9.2E-41 321.7 19.9 251 482-755 22-311 (314)
63 3kmu_A ILK, integrin-linked ki 100.0 1.6E-36 5.5E-41 316.0 17.7 252 483-754 10-269 (271)
64 3cc6_A Protein tyrosine kinase 100.0 1.4E-36 4.8E-41 318.8 16.6 252 482-759 11-277 (281)
65 3dtc_A Mitogen-activated prote 100.0 2.1E-36 7.3E-41 315.5 17.9 246 483-752 7-270 (271)
66 3t9t_A Tyrosine-protein kinase 100.0 1.7E-36 5.7E-41 315.4 17.0 247 483-755 8-264 (267)
67 3qd2_B Eukaryotic translation 100.0 6.2E-37 2.1E-41 329.1 14.1 250 482-748 5-325 (332)
68 3kex_A Receptor tyrosine-prote 100.0 1.2E-36 4.2E-41 326.4 16.1 247 483-755 13-276 (325)
69 1mqb_A Ephrin type-A receptor 100.0 4.4E-36 1.5E-40 323.2 20.2 251 483-758 44-312 (333)
70 2yab_A Death-associated protei 100.0 5.2E-36 1.8E-40 325.5 20.8 244 482-748 11-272 (361)
71 1o6l_A RAC-beta serine/threoni 100.0 4E-36 1.4E-40 323.4 19.5 241 482-749 4-261 (337)
72 2y0a_A Death-associated protei 100.0 6.1E-36 2.1E-40 321.1 20.3 243 483-748 11-271 (326)
73 1t46_A HOMO sapiens V-KIT hard 100.0 1.4E-36 4.6E-41 323.9 14.9 252 482-755 22-307 (313)
74 3ll6_A Cyclin G-associated kin 100.0 1.3E-36 4.3E-41 327.4 14.7 260 482-758 27-311 (337)
75 3lxl_A Tyrosine-protein kinase 100.0 3E-37 1E-41 331.5 9.8 263 483-756 23-304 (327)
76 2ozo_A Tyrosine-protein kinase 100.0 3.2E-36 1.1E-40 349.7 19.0 245 485-755 337-598 (613)
77 2pvf_A Fibroblast growth facto 100.0 7.9E-36 2.7E-40 321.4 20.6 253 482-757 34-320 (334)
78 4eut_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 330.5 19.5 265 483-756 9-310 (396)
79 3f66_A Hepatocyte growth facto 100.0 6.2E-36 2.1E-40 316.6 19.2 249 483-755 25-291 (298)
80 2h8h_A Proto-oncogene tyrosine 100.0 8E-37 2.7E-41 349.7 13.1 250 481-756 265-524 (535)
81 1rjb_A FL cytokine receptor; k 100.0 1.2E-36 4.1E-41 329.1 13.6 254 481-756 43-335 (344)
82 3niz_A Rhodanese family protei 100.0 3.1E-36 1.1E-40 321.2 16.6 253 482-748 20-300 (311)
83 2zv2_A Calcium/calmodulin-depe 100.0 6.3E-36 2.2E-40 316.7 18.7 243 482-748 12-292 (298)
84 1tki_A Titin; serine kinase, m 100.0 3.4E-36 1.2E-40 322.2 16.6 245 482-749 4-258 (321)
85 3tki_A Serine/threonine-protei 100.0 6.5E-36 2.2E-40 320.4 18.8 244 482-749 6-262 (323)
86 1qpc_A LCK kinase; alpha beta 100.0 1.5E-36 5E-41 318.3 13.3 249 482-756 12-270 (279)
87 3og7_A AKAP9-BRAF fusion prote 100.0 3.4E-36 1.1E-40 317.4 15.9 250 482-754 23-287 (289)
88 4e5w_A Tyrosine-protein kinase 100.0 2.2E-36 7.7E-41 320.6 14.3 252 483-754 21-301 (302)
89 2bdw_A Hypothetical protein K1 100.0 1E-35 3.6E-40 323.8 19.9 246 481-749 27-285 (362)
90 3lzb_A Epidermal growth factor 100.0 3.8E-36 1.3E-40 322.8 16.1 247 483-755 15-278 (327)
91 2buj_A Serine/threonine-protei 100.0 3.2E-36 1.1E-40 321.7 15.5 254 482-755 28-306 (317)
92 3lxp_A Non-receptor tyrosine-p 100.0 4.3E-36 1.5E-40 321.1 16.1 258 485-755 33-310 (318)
93 1csn_A Casein kinase-1; phosph 100.0 7.4E-36 2.5E-40 315.8 17.5 252 483-756 10-284 (298)
94 3mdy_A Bone morphogenetic prot 100.0 9.4E-36 3.2E-40 320.8 18.5 262 481-758 35-334 (337)
95 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.9E-36 2.7E-40 323.2 17.9 240 482-748 22-280 (353)
96 1kob_A Twitchin; kinase, intra 100.0 8.7E-36 3E-40 326.7 18.4 246 482-749 50-305 (387)
97 2xir_A Vascular endothelial gr 100.0 3.9E-36 1.3E-40 320.8 15.1 263 474-757 18-312 (316)
98 2izr_A Casein kinase I isoform 100.0 3.4E-36 1.2E-40 323.7 14.7 251 483-756 9-282 (330)
99 1u5q_A Serine/threonine protei 100.0 1.1E-35 3.7E-40 321.8 18.7 242 483-749 54-306 (348)
100 1p4o_A Insulin-like growth fac 100.0 1.5E-36 5.2E-41 325.0 11.6 256 476-754 18-298 (322)
101 3c0i_A Peripheral plasma membr 100.0 1E-35 3.6E-40 322.6 18.3 245 483-748 24-286 (351)
102 3brb_A Proto-oncogene tyrosine 100.0 1.4E-35 4.9E-40 316.2 19.0 257 481-755 32-308 (313)
103 1byg_A CSK, protein (C-termina 100.0 6E-36 2E-40 313.5 15.8 250 482-757 20-275 (278)
104 3kfa_A Tyrosine-protein kinase 100.0 1.9E-36 6.6E-41 318.8 12.0 251 481-756 11-272 (288)
105 4fr4_A YANK1, serine/threonine 100.0 7.3E-36 2.5E-40 326.4 17.0 240 483-747 15-270 (384)
106 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.9E-36 1.3E-40 323.2 14.6 240 482-749 8-259 (336)
107 2x4f_A Myosin light chain kina 100.0 8.4E-36 2.9E-40 325.8 17.4 239 488-748 94-342 (373)
108 1fot_A TPK1 delta, CAMP-depend 100.0 1.8E-35 6.2E-40 315.9 19.5 240 482-748 5-258 (318)
109 1ob3_A PFPK5, cell division co 100.0 9.5E-36 3.3E-40 313.7 17.1 252 483-748 2-280 (288)
110 4fl3_A Tyrosine-protein kinase 100.0 7.5E-36 2.6E-40 347.5 17.7 239 489-754 375-630 (635)
111 3soa_A Calcium/calmodulin-depe 100.0 2.7E-35 9.1E-40 328.4 21.4 246 481-749 9-268 (444)
112 1u59_A Tyrosine-protein kinase 100.0 1.1E-35 3.9E-40 312.9 17.4 248 483-756 9-273 (287)
113 3pls_A Macrophage-stimulating 100.0 3.9E-35 1.3E-39 310.2 21.5 248 485-756 23-288 (298)
114 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-35 4.1E-40 321.9 17.7 244 481-748 51-305 (349)
115 3rgz_A Protein brassinosteroid 100.0 1.5E-35 5.2E-40 354.4 20.4 256 117-372 393-722 (768)
116 2wqm_A Serine/threonine-protei 100.0 3.1E-35 1E-39 313.2 20.6 256 482-757 31-299 (310)
117 2h34_A Serine/threonine-protei 100.0 2.9E-35 9.9E-40 313.4 20.2 250 482-755 33-296 (309)
118 2jii_A Serine/threonine-protei 100.0 5E-36 1.7E-40 325.4 14.6 255 483-758 42-339 (352)
119 1fvr_A Tyrosine-protein kinase 100.0 1.7E-35 5.7E-40 317.9 18.3 254 483-759 25-304 (327)
120 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-35 4.5E-40 316.3 17.2 237 483-748 57-304 (311)
121 2w1i_A JAK2; chromosomal rearr 100.0 8.3E-36 2.8E-40 320.1 15.6 253 483-755 41-322 (326)
122 3f3z_A Calcium/calmodulin-depe 100.0 2E-35 6.8E-40 309.2 18.1 245 482-749 8-262 (277)
123 2y94_A 5'-AMP-activated protei 100.0 2.1E-35 7.1E-40 331.5 19.3 241 482-749 15-267 (476)
124 3uc3_A Serine/threonine-protei 100.0 1.2E-35 4E-40 323.3 16.8 244 482-749 19-275 (361)
125 1xbb_A Tyrosine-protein kinase 100.0 1E-35 3.5E-40 313.9 15.9 247 482-755 15-279 (291)
126 2pmi_A Negative RE, cyclin-dep 100.0 2.2E-35 7.6E-40 315.4 18.6 252 482-749 4-294 (317)
127 4dc2_A Protein kinase C IOTA t 100.0 1.5E-35 5E-40 325.1 17.4 237 482-743 51-307 (396)
128 2eue_A Carbon catabolite derep 100.0 1.8E-35 6.3E-40 309.2 17.3 239 483-749 13-263 (275)
129 3gxj_A TGF-beta receptor type- 100.0 6.2E-37 2.1E-41 324.8 6.0 254 483-755 3-297 (303)
130 3v8s_A RHO-associated protein 100.0 2E-36 6.8E-41 333.8 10.2 250 476-749 62-330 (410)
131 2i1m_A Macrophage colony-stimu 100.0 6.8E-36 2.3E-40 321.6 14.1 254 481-756 44-327 (333)
132 3a62_A Ribosomal protein S6 ki 100.0 3.3E-35 1.1E-39 315.5 19.4 240 482-748 16-276 (327)
133 3is5_A Calcium-dependent prote 100.0 1.6E-35 5.4E-40 311.6 16.5 245 483-748 22-278 (285)
134 1xjd_A Protein kinase C, theta 100.0 1.1E-35 3.7E-40 321.0 15.5 241 480-747 14-268 (345)
135 3g2f_A Bone morphogenetic prot 100.0 1.3E-35 4.5E-40 319.8 15.9 260 482-755 12-318 (336)
136 2clq_A Mitogen-activated prote 100.0 7.8E-35 2.7E-39 307.5 21.3 244 484-748 23-278 (295)
137 2v62_A Serine/threonine-protei 100.0 7.3E-36 2.5E-40 323.2 13.5 257 483-755 37-328 (345)
138 3ork_A Serine/threonine protei 100.0 7.2E-36 2.5E-40 318.4 13.2 254 482-754 11-280 (311)
139 3o0g_A Cell division protein k 100.0 3.5E-35 1.2E-39 310.0 18.3 251 483-748 2-282 (292)
140 3a8x_A Protein kinase C IOTA t 100.0 3.1E-35 1.1E-39 317.8 18.2 236 483-743 9-264 (345)
141 3gni_B Strad alpha; kinase fol 100.0 3.4E-35 1.2E-39 323.4 18.9 194 482-687 24-239 (389)
142 2yfx_A Tyrosine-protein kinase 100.0 1.5E-35 5E-40 318.3 15.6 253 482-757 29-306 (327)
143 3fdn_A Serine/threonine-protei 100.0 3.6E-35 1.2E-39 307.7 18.2 241 482-749 8-258 (279)
144 2a19_B Interferon-induced, dou 100.0 3.1E-35 1E-39 308.7 17.5 251 482-757 10-276 (284)
145 1b6c_B TGF-B superfamily recep 100.0 8.3E-35 2.8E-39 314.2 21.4 258 480-756 39-337 (342)
146 4aw2_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 334.0 11.1 254 475-749 66-339 (437)
147 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.6E-35 9E-40 318.9 17.0 240 482-748 40-293 (350)
148 3dbq_A Dual specificity protei 100.0 1.6E-35 5.4E-40 320.2 15.2 241 483-749 9-274 (343)
149 3hko_A Calcium/calmodulin-depe 100.0 1.5E-35 5.1E-40 320.5 14.9 252 478-749 21-331 (345)
150 3cok_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 307.8 16.5 241 482-748 10-262 (278)
151 2a2a_A Death-associated protei 100.0 7.4E-35 2.5E-39 311.9 19.4 244 483-749 12-273 (321)
152 2ac3_A MAP kinase-interacting 100.0 3.5E-35 1.2E-39 313.5 16.6 246 483-749 12-296 (316)
153 3ttj_A Mitogen-activated prote 100.0 1.6E-34 5.4E-39 324.6 22.6 255 482-749 61-356 (464)
154 4hgt_A Casein kinase I isoform 100.0 1.8E-35 6.2E-40 312.4 14.1 256 481-757 7-282 (296)
155 3bhy_A Death-associated protei 100.0 1.2E-34 4E-39 304.3 20.1 250 483-755 5-274 (283)
156 3llt_A Serine/threonine kinase 100.0 1.4E-35 4.7E-40 322.9 13.4 202 473-688 25-262 (360)
157 3kk8_A Calcium/calmodulin depe 100.0 1E-34 3.4E-39 305.0 19.5 245 482-749 5-262 (284)
158 3uzp_A CKI-delta, CKID, casein 100.0 2.5E-35 8.4E-40 311.5 14.9 256 482-758 8-283 (296)
159 3i6u_A CDS1, serine/threonine- 100.0 5.5E-35 1.9E-39 324.6 18.3 244 481-749 133-400 (419)
160 4ejn_A RAC-alpha serine/threon 100.0 2.4E-35 8.1E-40 330.5 15.3 240 482-748 147-404 (446)
161 2jam_A Calcium/calmodulin-depe 100.0 1.2E-34 4.2E-39 307.7 20.0 244 483-749 9-262 (304)
162 2vd5_A DMPK protein; serine/th 100.0 8.8E-36 3E-40 328.8 11.4 253 474-748 52-327 (412)
163 1t4h_A Serine/threonine-protei 100.0 1.3E-34 4.5E-39 305.2 19.9 246 485-748 28-282 (290)
164 2y7j_A Phosphorylase B kinase 100.0 1.3E-34 4.4E-39 315.7 20.5 249 477-748 88-359 (365)
165 4agu_A Cyclin-dependent kinase 100.0 6.8E-35 2.3E-39 310.6 17.8 253 483-749 3-285 (311)
166 2i0e_A Protein kinase C-beta I 100.0 8.3E-35 2.8E-39 315.1 18.4 236 481-743 18-266 (353)
167 2zmd_A Dual specificity protei 100.0 5E-35 1.7E-39 321.7 16.7 241 483-749 56-321 (390)
168 3oz6_A Mitogen-activated prote 100.0 6.3E-35 2.2E-39 321.1 17.4 194 481-688 7-234 (388)
169 3uqc_A Probable conserved tran 100.0 5.4E-35 1.9E-39 307.5 16.1 232 483-757 31-267 (286)
170 3g33_A Cell division protein k 100.0 3.2E-34 1.1E-38 305.1 22.1 261 481-749 7-297 (308)
171 2w5a_A Serine/threonine-protei 100.0 1.8E-35 6.2E-40 309.8 11.8 253 482-752 5-271 (279)
172 1nxk_A MAP kinase-activated pr 100.0 4.8E-35 1.7E-39 322.9 15.3 248 482-749 60-322 (400)
173 2j7t_A Serine/threonine-protei 100.0 6.5E-35 2.2E-39 309.3 15.8 244 482-748 18-275 (302)
174 2yex_A Serine/threonine-protei 100.0 1.4E-34 4.9E-39 302.3 18.2 243 482-748 6-261 (276)
175 3a7i_A MST3 kinase, serine/thr 100.0 1.8E-34 6.1E-39 306.2 18.9 242 482-750 21-272 (303)
176 1u46_A ACK-1, activated CDC42 100.0 3.1E-35 1.1E-39 309.9 12.9 248 483-755 18-284 (291)
177 3pg1_A Mitogen-activated prote 100.0 1.4E-34 4.8E-39 315.2 18.4 266 475-749 14-317 (362)
178 2rku_A Serine/threonine-protei 100.0 1.5E-34 5.3E-39 305.3 18.0 241 482-749 14-266 (294)
179 3kn6_A Ribosomal protein S6 ki 100.0 5.6E-35 1.9E-39 313.4 14.8 237 488-748 16-270 (325)
180 2r5t_A Serine/threonine-protei 100.0 7.5E-35 2.6E-39 317.7 16.0 242 482-750 37-291 (373)
181 2qr7_A Ribosomal protein S6 ki 100.0 8.1E-35 2.8E-39 314.1 16.0 243 482-749 21-278 (342)
182 2owb_A Serine/threonine-protei 100.0 1.4E-34 4.9E-39 311.7 17.7 241 482-749 40-292 (335)
183 3rp9_A Mitogen-activated prote 100.0 3.3E-34 1.1E-38 322.5 21.4 189 483-681 53-280 (458)
184 1x8b_A WEE1HU, WEE1-like prote 100.0 1E-34 3.4E-39 305.2 16.0 243 481-749 9-280 (289)
185 3byv_A Rhoptry kinase; malaria 100.0 1.4E-35 4.7E-40 325.0 9.6 246 482-748 72-359 (377)
186 2j0j_A Focal adhesion kinase 1 100.0 1.2E-34 4E-39 338.6 18.0 249 481-755 388-651 (656)
187 3dls_A PAS domain-containing s 100.0 2.5E-35 8.4E-40 317.5 11.3 236 481-749 22-275 (335)
188 3eqc_A Dual specificity mitoge 100.0 8.4E-35 2.9E-39 316.7 15.6 254 483-749 33-325 (360)
189 2h6d_A 5'-AMP-activated protei 100.0 1.7E-34 5.8E-39 301.9 17.2 241 482-749 10-262 (276)
190 2acx_A G protein-coupled recep 100.0 1.1E-34 3.9E-39 330.0 17.0 245 482-748 183-444 (576)
191 2vwi_A Serine/threonine-protei 100.0 5.4E-35 1.9E-39 309.8 13.3 253 481-749 13-288 (303)
192 3q5i_A Protein kinase; CDPK, m 100.0 2.7E-34 9.1E-39 327.0 19.9 245 482-749 35-302 (504)
193 2vgo_A Serine/threonine-protei 100.0 1.5E-34 5.2E-39 303.8 16.4 241 482-749 13-263 (284)
194 3lij_A Calcium/calmodulin depe 100.0 2.1E-34 7.1E-39 327.1 18.6 244 483-749 37-292 (494)
195 4aaa_A Cyclin-dependent kinase 100.0 1E-34 3.6E-39 312.2 15.2 254 482-749 24-307 (331)
196 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-34 3.8E-39 311.7 15.1 254 480-748 31-318 (329)
197 1cm8_A Phosphorylated MAP kina 100.0 3.2E-34 1.1E-38 312.7 18.8 255 482-749 24-308 (367)
198 3mwu_A Calmodulin-domain prote 100.0 2.8E-34 9.6E-39 325.4 18.7 244 482-749 21-277 (486)
199 3nsz_A CK II alpha, casein kin 100.0 2.6E-34 8.9E-39 308.8 17.5 248 483-748 36-319 (330)
200 3nyv_A Calmodulin-domain prote 100.0 1.4E-34 4.6E-39 328.0 16.1 244 483-749 26-282 (484)
201 2y4i_B KSR2, HKSR2, kinase sup 100.0 3E-35 1E-39 314.4 10.0 254 477-757 27-304 (319)
202 1phk_A Phosphorylase kinase; g 100.0 3.8E-34 1.3E-38 302.8 18.1 245 481-748 15-283 (298)
203 1ua2_A CAK, cell division prot 100.0 2.4E-34 8.1E-39 311.4 16.8 254 480-749 7-292 (346)
204 3mtl_A Cell division protein k 100.0 6.6E-35 2.2E-39 312.8 11.8 253 483-749 2-282 (324)
205 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.6E-34 9.1E-39 313.4 16.8 244 481-755 63-339 (365)
206 3n9x_A Phosphotransferase; mal 100.0 4.3E-34 1.5E-38 318.7 18.4 194 482-685 25-252 (432)
207 3m2w_A MAP kinase-activated pr 100.0 2.1E-34 7.2E-39 305.2 15.0 234 482-749 16-257 (299)
208 3lm5_A Serine/threonine-protei 100.0 4E-34 1.4E-38 307.2 17.3 250 479-749 24-288 (327)
209 3eb0_A Putative uncharacterize 100.0 1.7E-34 5.9E-39 317.0 14.5 263 479-749 3-322 (383)
210 3q60_A ROP5B; pseudokinase, tr 100.0 4E-35 1.4E-39 320.6 9.3 255 482-748 61-352 (371)
211 3sv0_A Casein kinase I-like; t 100.0 4E-34 1.4E-38 321.6 17.5 255 482-757 6-280 (483)
212 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-34 4.3E-39 314.6 12.9 244 482-750 53-323 (355)
213 3fme_A Dual specificity mitoge 100.0 3.7E-34 1.3E-38 301.5 15.9 247 482-749 6-267 (290)
214 2ycf_A Serine/threonine-protei 100.0 2.6E-34 8.9E-39 307.8 14.8 242 482-748 9-274 (322)
215 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.3E-34 2.1E-38 323.1 18.7 239 483-743 185-438 (543)
216 2x7f_A TRAF2 and NCK-interacti 100.0 3.1E-34 1.1E-38 307.7 15.3 258 474-749 15-287 (326)
217 3an0_A Dual specificity mitoge 100.0 3.6E-34 1.2E-38 309.1 15.6 248 481-749 49-311 (340)
218 2pml_X PFPK7, Ser/Thr protein 100.0 3.1E-34 1.1E-38 310.6 15.1 253 482-748 30-322 (348)
219 3com_A Serine/threonine-protei 100.0 1.2E-33 3.9E-38 301.5 19.2 243 481-748 27-278 (314)
220 2xrw_A Mitogen-activated prote 100.0 1.9E-33 6.4E-38 307.3 21.2 255 482-749 24-319 (371)
221 4e7w_A Glycogen synthase kinas 100.0 1.9E-34 6.4E-39 317.7 13.0 258 483-749 40-322 (394)
222 2fst_X Mitogen-activated prote 100.0 6.4E-34 2.2E-38 310.2 17.0 258 482-749 28-312 (367)
223 3v47_A TOLL-like receptor 5B a 100.0 3.7E-33 1.3E-37 313.6 23.5 268 101-368 37-385 (455)
224 1j1b_A Glycogen synthase kinas 100.0 6.9E-34 2.3E-38 315.8 17.2 257 483-749 54-337 (420)
225 3e3p_A Protein kinase, putativ 100.0 6.5E-34 2.2E-38 309.6 16.5 268 476-749 16-315 (360)
226 2r3i_A Cell division protein k 100.0 1.6E-33 5.6E-38 298.0 18.9 251 483-748 3-283 (299)
227 2wtk_C Serine/threonine-protei 100.0 2.3E-33 8E-38 297.8 19.9 244 482-749 4-264 (305)
228 3mi9_A Cell division protein k 100.0 8.9E-34 3E-38 307.5 16.9 262 482-749 16-312 (351)
229 2i6l_A Mitogen-activated prote 100.0 7.5E-34 2.6E-38 303.4 16.0 257 483-749 11-306 (320)
230 3qyz_A Mitogen-activated prote 100.0 5.7E-33 1.9E-37 302.8 22.0 253 482-749 26-314 (364)
231 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-33 4.5E-38 330.8 18.1 236 481-743 339-587 (674)
232 3kvw_A DYRK2, dual specificity 100.0 2E-33 6.7E-38 312.9 18.2 193 482-688 96-302 (429)
233 4exu_A Mitogen-activated prote 100.0 3.4E-33 1.2E-37 305.3 19.8 255 482-749 41-324 (371)
234 2wei_A Calmodulin-domain prote 100.0 1.6E-33 5.4E-38 296.5 16.5 245 482-749 21-277 (287)
235 1zy4_A Serine/threonine-protei 100.0 2.2E-33 7.7E-38 297.1 17.2 251 482-749 5-284 (303)
236 3cek_A Dual specificity protei 100.0 7.2E-34 2.5E-38 303.1 13.4 243 481-749 26-293 (313)
237 3rgf_A Cyclin-dependent kinase 100.0 1.3E-33 4.5E-38 312.3 14.8 191 485-687 22-238 (405)
238 1blx_A Cyclin-dependent kinase 100.0 6.1E-33 2.1E-37 297.5 19.5 260 481-748 9-296 (326)
239 1z57_A Dual specificity protei 100.0 2.4E-33 8.4E-38 301.8 16.4 253 483-749 14-329 (339)
240 4fcg_A Uncharacterized protein 100.0 1.8E-33 6.2E-38 301.8 15.1 276 26-366 24-313 (328)
241 3aln_A Dual specificity mitoge 100.0 2.2E-33 7.4E-38 301.3 15.3 250 482-749 21-286 (327)
242 2b9h_A MAP kinase FUS3, mitoge 100.0 3.2E-33 1.1E-37 303.3 16.6 257 482-749 10-306 (353)
243 3coi_A Mitogen-activated prote 100.0 7.9E-33 2.7E-37 300.3 19.2 253 483-749 24-306 (353)
244 1wak_A Serine/threonine-protei 100.0 5.2E-33 1.8E-37 306.4 16.9 258 482-748 36-391 (397)
245 2rio_A Serine/threonine-protei 100.0 2.6E-33 8.8E-38 312.5 14.6 241 485-748 17-295 (434)
246 2vx3_A Dual specificity tyrosi 100.0 8.9E-33 3E-37 303.3 18.6 196 481-688 52-261 (382)
247 3fhr_A MAP kinase-activated pr 100.0 3.7E-33 1.3E-37 300.7 14.5 249 482-749 27-288 (336)
248 2iwi_A Serine/threonine-protei 100.0 3.2E-33 1.1E-37 297.8 12.3 238 479-749 27-284 (312)
249 2dyl_A Dual specificity mitoge 100.0 2.3E-32 8E-37 291.7 18.6 246 482-749 24-284 (318)
250 3qa8_A MGC80376 protein; kinas 100.0 6.2E-33 2.1E-37 318.7 14.7 267 483-755 14-309 (676)
251 2id5_A Lingo-1, leucine rich r 100.0 6E-32 2.1E-36 305.7 21.5 268 100-367 38-309 (477)
252 3p23_A Serine/threonine-protei 100.0 9.8E-33 3.3E-37 307.2 14.7 240 482-748 23-283 (432)
253 2eu9_A Dual specificity protei 100.0 2.3E-32 7.8E-37 296.3 16.3 252 483-748 19-333 (355)
254 3a99_A Proto-oncogene serine/t 100.0 5.2E-33 1.8E-37 297.5 10.5 236 481-749 41-294 (320)
255 1q8y_A SR protein kinase; tran 100.0 2.5E-32 8.5E-37 298.5 13.9 258 483-749 19-334 (373)
256 3v47_A TOLL-like receptor 5B a 100.0 5E-31 1.7E-35 296.2 23.9 253 118-370 30-363 (455)
257 2pzi_A Probable serine/threoni 100.0 5E-32 1.7E-36 319.3 16.5 240 483-753 80-326 (681)
258 3oja_B Anopheles plasmodium-re 100.0 3.5E-31 1.2E-35 307.6 20.8 256 108-369 64-339 (597)
259 1ogq_A PGIP-2, polygalacturona 100.0 7E-32 2.4E-36 287.6 12.7 232 118-372 50-286 (313)
260 3o6n_A APL1; leucine-rich repe 100.0 2.3E-30 7.7E-35 284.9 20.1 256 107-368 57-332 (390)
261 3t6q_A CD180 antigen; protein- 100.0 5.4E-30 1.8E-34 298.6 23.9 259 109-368 292-561 (606)
262 4eco_A Uncharacterized protein 100.0 1.1E-30 3.8E-35 305.4 17.8 254 110-368 239-527 (636)
263 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-29 4E-34 296.9 26.5 128 100-227 58-186 (635)
264 3vq2_A TLR4, TOLL-like recepto 100.0 8E-30 2.7E-34 297.2 24.5 154 55-209 4-172 (606)
265 3j0a_A TOLL-like receptor 5; m 100.0 1.1E-29 3.9E-34 306.7 25.9 301 68-368 19-376 (844)
266 3t6q_A CD180 antigen; protein- 100.0 7.1E-30 2.4E-34 297.6 22.7 268 100-368 39-364 (606)
267 1xku_A Decorin; proteoglycan, 100.0 4.8E-29 1.6E-33 267.8 26.4 246 118-367 52-306 (330)
268 4ecn_A Leucine-rich repeat pro 100.0 7E-30 2.4E-34 304.4 21.8 256 101-363 498-785 (876)
269 3j0a_A TOLL-like receptor 5; m 100.0 1.2E-29 4E-34 306.6 23.3 271 100-370 30-354 (844)
270 1ziw_A TOLL-like receptor 3; i 100.0 1.7E-29 5.9E-34 298.5 24.2 241 100-340 31-306 (680)
271 3vq2_A TLR4, TOLL-like recepto 100.0 1.9E-29 6.5E-34 294.0 24.0 112 73-184 56-171 (606)
272 2vuw_A Serine/threonine-protei 100.0 4.6E-31 1.6E-35 284.4 9.4 248 482-747 19-329 (336)
273 2ft3_A Biglycan; proteoglycan, 100.0 5.9E-29 2E-33 267.4 24.6 245 118-367 54-307 (332)
274 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.6E-29 2.9E-33 285.7 27.6 263 100-368 58-487 (562)
275 2z7x_B TOLL-like receptor 1, v 100.0 4.3E-29 1.5E-33 285.4 24.8 132 234-368 321-458 (520)
276 3dzo_A Rhoptry kinase domain; 100.0 1.6E-30 5.5E-35 288.0 12.5 247 481-748 76-363 (413)
277 2id5_A Lingo-1, leucine rich r 100.0 2.9E-29 1E-33 283.7 22.6 252 118-369 32-287 (477)
278 4fcg_A Uncharacterized protein 100.0 1.2E-29 4.2E-34 272.0 17.9 204 141-370 80-293 (328)
279 2ft3_A Biglycan; proteoglycan, 100.0 1.1E-28 3.6E-33 265.4 23.0 259 100-365 60-331 (332)
280 1xku_A Decorin; proteoglycan, 100.0 4.9E-28 1.7E-32 260.0 27.5 260 100-365 58-330 (330)
281 2z63_A TOLL-like receptor 4, v 100.0 1.6E-28 5.6E-33 283.8 22.9 136 234-369 370-509 (570)
282 2z7x_B TOLL-like receptor 1, v 100.0 5E-29 1.7E-33 284.9 17.6 262 100-369 27-414 (520)
283 3zyi_A Leucine-rich repeat-con 100.0 5.3E-28 1.8E-32 271.4 23.9 225 118-343 75-303 (452)
284 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.9E-28 3.4E-32 276.8 26.4 288 74-368 53-511 (562)
285 3zyj_A Leucine-rich repeat-con 100.0 7.8E-28 2.7E-32 269.0 23.6 225 118-343 64-292 (440)
286 3oja_B Anopheles plasmodium-re 100.0 4.4E-28 1.5E-32 281.6 21.9 258 100-368 81-359 (597)
287 2z63_A TOLL-like receptor 4, v 100.0 9.4E-28 3.2E-32 277.4 23.8 297 74-371 29-487 (570)
288 2z81_A CD282 antigen, TOLL-lik 100.0 7.4E-29 2.5E-33 285.4 14.5 267 100-368 32-424 (549)
289 2z80_A TOLL-like receptor 2, v 100.0 1.6E-28 5.6E-33 266.3 16.0 251 118-369 52-316 (353)
290 1wwl_A Monocyte differentiatio 100.0 1.7E-29 5.7E-34 269.2 7.2 245 114-368 39-310 (312)
291 2z66_A Variable lymphocyte rec 100.0 5.1E-28 1.7E-32 256.9 18.2 230 118-368 28-262 (306)
292 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-27 4.3E-32 282.5 23.2 251 118-368 25-310 (680)
293 2z81_A CD282 antigen, TOLL-lik 100.0 6.3E-28 2.2E-32 277.6 20.1 293 74-370 27-489 (549)
294 2z66_A Variable lymphocyte rec 100.0 1.5E-27 5.1E-32 253.3 19.7 226 121-371 10-240 (306)
295 3o6n_A APL1; leucine-rich repe 100.0 3E-27 1E-31 259.9 21.6 247 116-368 43-309 (390)
296 1ozn_A Reticulon 4 receptor; N 99.9 1.8E-27 6E-32 250.1 18.5 234 117-351 31-269 (285)
297 3zyi_A Leucine-rich repeat-con 99.9 4.7E-27 1.6E-31 263.6 22.9 220 100-320 81-304 (452)
298 1wwl_A Monocyte differentiatio 99.9 4.9E-29 1.7E-33 265.5 4.4 228 109-344 56-310 (312)
299 3bz5_A Internalin-J, INLJ; leu 99.9 3.7E-26 1.3E-30 255.9 27.4 215 114-346 81-302 (457)
300 4g8a_A TOLL-like receptor 4; l 99.9 1.2E-26 4.1E-31 271.3 24.3 134 118-251 52-187 (635)
301 3zyj_A Leucine-rich repeat-con 99.9 1.3E-26 4.3E-31 259.2 22.3 220 100-320 70-293 (440)
302 4fmz_A Internalin; leucine ric 99.9 2.9E-26 9.8E-31 247.9 24.3 242 114-369 84-326 (347)
303 4fmz_A Internalin; leucine ric 99.9 2.4E-26 8.1E-31 248.5 23.5 279 73-367 66-346 (347)
304 1jl5_A Outer protein YOPM; leu 99.9 9.3E-26 3.2E-30 252.5 28.0 221 113-368 148-371 (454)
305 3bz5_A Internalin-J, INLJ; leu 99.9 7.4E-26 2.5E-30 253.5 26.6 238 113-371 59-303 (457)
306 1ozn_A Reticulon 4 receptor; N 99.9 2.5E-26 8.4E-31 241.3 21.1 224 121-368 14-239 (285)
307 1o6v_A Internalin A; bacterial 99.9 8.5E-26 2.9E-30 254.4 24.5 236 114-368 108-345 (466)
308 1o6v_A Internalin A; bacterial 99.9 9.8E-26 3.4E-30 253.9 24.0 248 101-368 119-367 (466)
309 3oja_A Leucine-rich immune mol 99.9 1.5E-27 5E-32 269.7 6.2 232 116-361 32-269 (487)
310 1jl5_A Outer protein YOPM; leu 99.9 1.1E-25 3.7E-30 252.0 21.1 241 101-368 18-271 (454)
311 3o53_A Protein LRIM1, AGAP0063 99.9 8.8E-28 3E-32 256.4 1.2 238 112-363 28-271 (317)
312 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-25 8.5E-30 256.9 21.6 285 47-369 12-299 (622)
313 2z80_A TOLL-like receptor 2, v 99.9 1.9E-26 6.4E-31 250.0 10.9 247 100-347 58-318 (353)
314 2o6q_A Variable lymphocyte rec 99.9 8.1E-25 2.8E-29 227.9 22.7 181 118-319 37-218 (270)
315 2z62_A TOLL-like receptor 4, v 99.9 2.5E-25 8.6E-30 232.4 18.7 205 118-344 28-238 (276)
316 2z62_A TOLL-like receptor 4, v 99.9 1E-24 3.4E-29 227.9 21.2 214 133-369 21-239 (276)
317 3rfs_A Internalin B, repeat mo 99.9 4E-25 1.4E-29 230.4 17.6 210 113-354 36-246 (272)
318 3o53_A Protein LRIM1, AGAP0063 99.9 5E-26 1.7E-30 242.9 10.5 236 119-367 11-250 (317)
319 3oja_A Leucine-rich immune mol 99.9 1E-25 3.6E-30 254.5 12.7 215 140-367 32-250 (487)
320 2o6q_A Variable lymphocyte rec 99.9 1E-23 3.5E-28 219.5 24.6 201 120-344 18-219 (270)
321 1p9a_G Platelet glycoprotein I 99.9 1E-23 3.5E-28 221.8 21.8 201 114-342 6-207 (290)
322 4glp_A Monocyte differentiatio 99.9 4.2E-24 1.4E-28 227.2 18.6 228 118-368 64-308 (310)
323 1p9a_G Platelet glycoprotein I 99.9 1.6E-23 5.5E-28 220.3 22.4 205 137-368 5-209 (290)
324 4azs_A Methyltransferase WBDD; 99.9 7E-26 2.4E-30 259.7 3.3 177 490-684 241-437 (569)
325 3rfs_A Internalin B, repeat mo 99.9 2.7E-24 9.1E-29 224.2 14.6 222 117-372 18-240 (272)
326 2xwt_C Thyrotropin receptor; s 99.9 3.3E-23 1.1E-27 211.5 14.8 195 119-340 32-236 (239)
327 4glp_A Monocyte differentiatio 99.9 1.1E-23 3.8E-28 223.9 11.6 202 116-343 89-307 (310)
328 3g06_A SSPH2 (leucine-rich rep 99.9 1.1E-21 3.8E-26 226.4 27.9 229 100-367 46-274 (622)
329 2xwt_C Thyrotropin receptor; s 99.9 7.3E-23 2.5E-27 209.0 15.0 203 133-364 25-236 (239)
330 3m19_A Variable lymphocyte rec 99.9 6.6E-22 2.3E-26 203.5 21.2 178 120-321 16-194 (251)
331 3m19_A Variable lymphocyte rec 99.9 8.8E-22 3E-26 202.5 21.7 179 143-345 15-194 (251)
332 1h6u_A Internalin H; cell adhe 99.9 1.4E-22 4.9E-27 215.0 16.0 195 114-344 37-231 (308)
333 3goz_A Leucine-rich repeat-con 99.9 1.7E-23 5.9E-28 227.5 6.8 245 101-345 5-299 (362)
334 2ca6_A RAN GTPase-activating p 99.9 1.3E-24 4.3E-29 238.7 -2.4 243 110-368 24-317 (386)
335 1h6u_A Internalin H; cell adhe 99.9 6.7E-22 2.3E-26 209.9 16.2 209 122-368 23-231 (308)
336 3goz_A Leucine-rich repeat-con 99.9 7.5E-24 2.6E-28 230.3 0.3 247 122-368 2-298 (362)
337 3cvr_A Invasion plasmid antige 99.9 1E-21 3.5E-26 224.0 17.7 184 119-326 60-250 (571)
338 2ca6_A RAN GTPase-activating p 99.9 2.2E-24 7.5E-29 236.7 -5.3 217 132-368 22-288 (386)
339 3cvr_A Invasion plasmid antige 99.9 2.7E-21 9.2E-26 220.5 19.7 187 143-353 60-253 (571)
340 2o6s_A Variable lymphocyte rec 99.9 1.5E-21 5.1E-26 194.7 14.4 161 118-282 28-189 (208)
341 4ay9_X Follicle-stimulating ho 99.9 6E-22 2E-26 214.3 11.9 220 118-341 30-257 (350)
342 2ast_B S-phase kinase-associat 99.9 1.7E-23 6E-28 224.8 -1.2 202 112-316 62-282 (336)
343 1z7x_W Ribonuclease inhibitor; 99.9 2.2E-24 7.5E-29 242.4 -10.0 259 109-367 104-411 (461)
344 2ast_B S-phase kinase-associat 99.8 9.5E-23 3.3E-27 219.1 1.4 244 120-371 49-310 (336)
345 2o6s_A Variable lymphocyte rec 99.8 1.5E-20 5.2E-25 187.4 17.0 160 167-354 29-189 (208)
346 1zar_A RIO2 kinase; serine kin 99.8 7.5E-21 2.6E-25 198.7 15.1 141 477-643 84-242 (282)
347 3en9_A Glycoprotease, O-sialog 99.8 5.7E-22 2E-26 226.0 6.9 173 488-685 341-538 (540)
348 4ay9_X Follicle-stimulating ho 99.8 1.9E-20 6.5E-25 202.4 18.0 236 121-364 12-256 (350)
349 1z7x_W Ribonuclease inhibitor; 99.8 7E-24 2.4E-28 238.2 -11.8 258 110-367 48-354 (461)
350 1m9s_A Internalin B; cell inva 99.8 2E-20 6.9E-25 215.6 12.2 174 114-321 39-212 (605)
351 4b8c_D Glucose-repressible alc 99.8 1.5E-21 5E-26 230.7 2.2 189 26-249 129-328 (727)
352 3e6j_A Variable lymphocyte rec 99.8 2.9E-19 9.9E-24 180.9 17.3 134 118-252 40-174 (229)
353 1h6t_A Internalin B; cell adhe 99.8 1.4E-19 4.9E-24 190.2 15.4 171 115-319 43-213 (291)
354 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.7E-24 209.5 15.7 195 117-347 20-214 (605)
355 1h6t_A Internalin B; cell adhe 99.8 8.9E-20 3E-24 191.8 13.5 190 119-344 25-214 (291)
356 2xot_A Amphoterin-induced prot 99.8 3.3E-19 1.1E-23 193.5 14.0 174 122-319 22-202 (361)
357 2v9t_B SLIT homolog 2 protein 99.8 1.5E-18 5.2E-23 174.4 16.8 150 146-319 15-165 (220)
358 3e6j_A Variable lymphocyte rec 99.8 2.4E-18 8.3E-23 174.1 18.2 134 166-321 40-174 (229)
359 2xot_A Amphoterin-induced prot 99.8 4.5E-19 1.5E-23 192.5 13.3 176 145-344 21-203 (361)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-18 4.3E-23 175.1 15.2 45 276-320 123-167 (220)
361 1dce_A Protein (RAB geranylger 99.8 5.6E-22 1.9E-26 227.2 -11.4 203 115-360 346-566 (567)
362 2v9t_B SLIT homolog 2 protein 99.8 2.5E-18 8.7E-23 172.8 15.8 133 118-250 32-165 (220)
363 4ezg_A Putative uncharacterize 99.8 7.9E-19 2.7E-23 173.4 11.0 107 115-225 41-147 (197)
364 1xeu_A Internalin C; cellular 99.8 7.6E-19 2.6E-23 181.7 10.1 171 116-321 17-187 (263)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 3.9E-18 1.3E-22 171.5 14.8 133 119-251 33-167 (220)
366 1zth_A RIO1 serine protein kin 99.8 1.1E-18 3.9E-23 179.9 10.9 138 485-643 49-219 (258)
367 4ezg_A Putative uncharacterize 99.7 4.2E-18 1.4E-22 168.1 11.8 154 137-319 39-194 (197)
368 1xeu_A Internalin C; cellular 99.7 4.1E-18 1.4E-22 176.3 9.4 177 132-345 11-187 (263)
369 4b8c_D Glucose-repressible alc 99.7 8.8E-19 3E-23 206.9 4.3 219 118-346 173-407 (727)
370 1dce_A Protein (RAB geranylger 99.7 5.2E-19 1.8E-23 202.6 -2.1 172 101-299 356-550 (567)
371 1w8a_A SLIT protein; signaling 99.7 1.2E-16 4E-21 157.0 13.2 129 121-252 11-141 (192)
372 2ell_A Acidic leucine-rich nuc 99.7 5E-17 1.7E-21 155.9 9.8 134 116-251 22-161 (168)
373 1w8a_A SLIT protein; signaling 99.7 2.5E-17 8.4E-22 161.9 7.4 113 119-231 30-143 (192)
374 3ogk_B Coronatine-insensitive 99.7 2.5E-19 8.7E-24 207.7 -9.8 130 114-245 160-326 (592)
375 2ell_A Acidic leucine-rich nuc 99.7 2.2E-16 7.7E-21 151.3 11.4 108 140-249 22-132 (168)
376 2je0_A Acidic leucine-rich nuc 99.7 6.2E-17 2.1E-21 151.9 7.1 129 116-246 15-149 (149)
377 3ogk_B Coronatine-insensitive 99.6 3.4E-18 1.2E-22 198.2 -7.0 265 102-368 120-421 (592)
378 2o6r_A Variable lymphocyte rec 99.6 3.5E-15 1.2E-19 144.3 14.4 132 120-254 9-141 (177)
379 2wfh_A SLIT homolog 2 protein 99.6 3.4E-15 1.2E-19 146.6 14.2 126 121-250 13-139 (193)
380 2je0_A Acidic leucine-rich nuc 99.6 6.8E-16 2.3E-20 144.8 8.0 129 140-291 15-149 (149)
381 2wfh_A SLIT homolog 2 protein 99.6 7.1E-15 2.4E-19 144.3 15.1 128 240-368 13-140 (193)
382 3sb4_A Hypothetical leucine ri 99.6 1.6E-15 5.4E-20 162.3 10.4 193 165-360 100-327 (329)
383 2o6r_A Variable lymphocyte rec 99.6 1.2E-14 4.3E-19 140.4 15.2 129 240-368 10-138 (177)
384 4gyi_A RIO2 kinase; protein ki 99.6 3.4E-15 1.2E-19 160.1 11.7 145 484-642 96-264 (397)
385 1a9n_A U2A', U2A'; complex (nu 99.6 2.6E-15 8.8E-20 145.2 7.0 133 113-250 14-153 (176)
386 1ds9_A Outer arm dynein; leuci 99.5 2.3E-17 7.7E-22 163.0 -10.2 129 114-247 14-150 (198)
387 1a9n_A U2A', U2A'; complex (nu 99.5 8.5E-15 2.9E-19 141.5 7.3 109 137-249 14-125 (176)
388 1ds9_A Outer arm dynein; leuci 99.5 4.7E-17 1.6E-21 160.7 -9.5 154 138-319 14-185 (198)
389 2p1m_B Transport inhibitor res 99.5 2.7E-16 9.4E-21 182.1 -5.0 34 281-314 371-405 (594)
390 3g39_A Variable lymphocyte rec 99.5 8.7E-14 3E-18 133.5 12.5 107 120-229 11-117 (170)
391 3sb4_A Hypothetical leucine ri 99.5 4.6E-14 1.6E-18 150.9 10.9 218 117-337 48-328 (329)
392 2p1m_B Transport inhibitor res 99.5 1E-16 3.5E-21 185.7 -11.9 252 114-367 180-494 (594)
393 2r9u_A Variable lymphocyte rec 99.5 1.9E-13 6.5E-18 131.6 12.7 106 121-229 15-120 (174)
394 3g39_A Variable lymphocyte rec 99.5 2.9E-13 9.9E-18 129.8 12.8 107 239-345 11-117 (170)
395 2r9u_A Variable lymphocyte rec 99.4 7.5E-13 2.6E-17 127.4 12.8 104 240-343 15-118 (174)
396 4fdw_A Leucine rich hypothetic 99.4 1.5E-11 5.2E-16 134.5 20.9 239 117-367 112-358 (401)
397 4fdw_A Leucine rich hypothetic 99.3 6.1E-11 2.1E-15 129.7 21.2 240 113-364 131-380 (401)
398 2ifg_A High affinity nerve gro 99.3 4.7E-12 1.6E-16 136.2 10.6 101 124-227 14-116 (347)
399 2ifg_A High affinity nerve gro 99.3 1.4E-11 4.7E-16 132.5 11.8 105 145-251 11-117 (347)
400 3un9_A NLR family member X1; l 99.2 1.4E-13 4.8E-18 149.2 -10.3 109 118-226 72-195 (372)
401 3tm0_A Aminoglycoside 3'-phosp 99.2 7.8E-11 2.7E-15 121.2 10.8 149 477-642 8-213 (263)
402 3un9_A NLR family member X1; l 99.1 9.4E-13 3.2E-17 142.7 -9.3 87 141-227 71-168 (372)
403 1nd4_A Aminoglycoside 3'-phosp 99.0 3.6E-10 1.2E-14 115.8 8.8 139 482-642 19-214 (264)
404 4fs7_A Uncharacterized protein 98.8 5.3E-08 1.8E-12 106.3 16.7 109 113-224 66-195 (394)
405 3dxp_A Putative acyl-COA dehyd 98.8 1E-08 3.6E-13 110.5 10.9 145 488-643 43-249 (359)
406 2ra8_A Uncharacterized protein 98.8 4.5E-10 1.5E-14 120.7 -0.5 82 138-222 135-227 (362)
407 4fs7_A Uncharacterized protein 98.7 8.4E-08 2.9E-12 104.7 15.1 220 135-364 155-376 (394)
408 2ra8_A Uncharacterized protein 98.7 2E-09 7E-14 115.6 1.0 87 110-199 131-228 (362)
409 3sg8_A APH(2'')-ID; antibiotic 98.7 1.9E-08 6.4E-13 105.8 6.6 183 488-686 25-288 (304)
410 4gt6_A Cell surface protein; l 98.5 3.7E-06 1.3E-10 91.6 20.8 130 113-246 82-214 (394)
411 3rw6_A Nuclear RNA export fact 98.5 8.3E-09 2.8E-13 105.3 -0.7 67 139-207 167-237 (267)
412 3rw6_A Nuclear RNA export fact 98.4 6.7E-09 2.3E-13 105.9 -4.2 104 138-243 137-257 (267)
413 1io0_A Tropomodulin; LRR prote 98.4 2.2E-08 7.7E-13 96.9 -0.8 118 110-227 28-164 (185)
414 3r70_A Aminoglycoside phosphot 98.3 3.4E-06 1.1E-10 89.2 13.0 137 484-643 38-238 (320)
415 4h09_A Hypothetical leucine ri 98.3 5.4E-05 1.9E-09 81.7 22.4 240 113-363 64-342 (379)
416 4gt6_A Cell surface protein; l 98.3 3.4E-05 1.1E-09 84.0 20.0 244 113-364 58-344 (394)
417 3d1u_A Putative fructosamine-3 98.3 3.8E-06 1.3E-10 87.2 11.9 140 488-641 20-215 (288)
418 1io0_A Tropomodulin; LRR prote 98.2 1.1E-07 3.6E-12 92.1 -1.8 118 133-250 27-164 (185)
419 3tdw_A Gentamicin resistance p 98.1 2.5E-05 8.4E-10 81.9 14.3 136 489-642 25-224 (306)
420 4h09_A Hypothetical leucine ri 98.0 0.00053 1.8E-08 73.8 21.6 241 113-363 41-319 (379)
421 3ovc_A Hygromycin-B 4-O-kinase 97.9 5E-05 1.7E-09 81.5 12.2 143 488-643 46-244 (362)
422 4gkh_A Aminoglycoside 3'-phosp 97.8 0.00011 3.7E-09 75.2 12.4 135 490-642 31-223 (272)
423 3ats_A Putative uncharacterize 97.7 5.4E-05 1.8E-09 81.0 8.0 82 489-575 26-121 (357)
424 2olc_A MTR kinase, methylthior 97.6 0.00032 1.1E-08 76.1 12.4 75 488-572 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.4 3.1E-05 1.1E-09 73.2 1.2 82 143-224 62-149 (176)
426 2q83_A YTAA protein; 2635576, 97.4 0.00091 3.1E-08 70.7 12.4 30 612-641 222-251 (346)
427 3f7w_A Putative fructosamine-3 97.3 0.00071 2.4E-08 69.9 9.7 76 487-574 19-97 (288)
428 3e4g_A ATP synthase subunit S, 97.1 8.7E-05 3E-09 70.1 0.9 84 118-201 61-150 (176)
429 3jr1_A Putative fructosamine-3 96.9 0.008 2.7E-07 62.6 13.0 138 488-638 41-232 (312)
430 2pyw_A Uncharacterized protein 96.7 0.0057 2E-07 66.8 10.9 31 612-643 232-262 (420)
431 3rfe_A Platelet glycoprotein I 96.6 0.0034 1.2E-07 56.3 7.1 37 283-319 32-68 (130)
432 2ppq_A HSK, HK, homoserine kin 96.5 0.008 2.7E-07 62.8 10.3 163 473-641 7-216 (322)
433 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0005 1.7E-08 66.2 0.7 113 113-225 36-168 (197)
434 3rfe_A Platelet glycoprotein I 96.4 0.0039 1.3E-07 55.8 6.1 54 241-294 12-67 (130)
435 3dxq_A Choline/ethanolamine ki 96.2 0.014 5E-07 60.3 9.9 30 612-642 173-202 (301)
436 1zyl_A Hypothetical protein YI 96.2 0.087 3E-06 54.9 15.8 145 490-642 33-223 (328)
437 3csv_A Aminoglycoside phosphot 95.8 0.035 1.2E-06 58.3 10.8 33 611-643 182-218 (333)
438 1pgv_A TMD-1, tropomodulin TMD 95.6 0.0031 1E-07 60.7 1.3 112 137-248 36-168 (197)
439 1nw1_A Choline kinase (49.2 KD 95.6 0.04 1.4E-06 60.1 10.2 72 489-574 79-159 (429)
440 3c5i_A Choline kinase; choline 95.0 0.045 1.5E-06 58.4 8.1 73 489-574 39-121 (369)
441 2qg7_A Ethanolamine kinase PV0 95.0 0.11 3.8E-06 57.0 11.4 73 489-574 114-188 (458)
442 3feg_A Choline/ethanolamine ki 94.7 0.13 4.4E-06 55.0 10.6 141 489-642 56-254 (379)
443 3i1a_A Spectinomycin phosphotr 92.9 0.52 1.8E-05 49.4 11.3 32 612-643 206-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 90.4 1.4 4.9E-05 47.1 11.4 30 612-641 244-279 (401)
445 3mes_A Choline kinase; malaria 89.4 0.67 2.3E-05 50.1 7.9 30 612-642 262-291 (424)
446 3cxl_A N-chimerin; SH2, RHO-GA 86.9 0.092 3.2E-06 57.8 -1.0 61 487-550 146-215 (463)
447 3g15_A CK, chetk-alpha, cholin 77.9 6.3 0.00022 42.0 9.2 30 613-642 245-280 (401)
448 2yle_A Protein spire homolog 1 76.8 10 0.00034 36.6 9.0 103 572-684 33-135 (229)
449 2k1k_A Ephrin type-A receptor 76.8 0.47 1.6E-05 31.9 -0.1 29 393-421 9-37 (38)
450 2l2t_A Receptor tyrosine-prote 75.6 0.65 2.2E-05 32.2 0.3 9 413-421 28-36 (44)
451 2ks1_B Epidermal growth factor 75.3 0.88 3E-05 31.6 0.9 9 413-421 29-37 (44)
452 2jwa_A Receptor tyrosine-prote 61.7 1.5 5.1E-05 30.3 -0.3 25 397-422 14-38 (44)
453 4ann_A ESSB; membrane protein, 61.2 14 0.00047 35.5 6.3 116 536-686 42-158 (215)
454 4ano_A ESSB; membrane protein, 56.6 13 0.00046 35.7 5.4 100 561-686 62-163 (219)
455 2lz0_A Uncharacterized protein 34.0 98 0.0034 25.4 6.6 39 135-174 13-51 (100)
456 2k9y_A Ephrin type-A receptor 29.4 18 0.0006 24.4 1.0 6 416-421 34-39 (41)
457 2lz0_A Uncharacterized protein 28.9 1E+02 0.0035 25.2 5.9 38 113-151 15-52 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=6.7e-50 Score=426.90 Aligned_cols=253 Identities=25% Similarity=0.425 Sum_probs=192.5
Q ss_pred cCCCcCCceecCCceeEEEEEec------CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 46777889999999999999864 47899999998877777889999999999999999999999998763
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
.++||||||++|+|.+++++... ..+++|.+++.++.|||+||+|||+. +||||||||+||
T Consensus 117 ----~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NI 189 (329)
T 4aoj_A 117 ----PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNC 189 (329)
T ss_dssp ----SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred ----EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhE
Confidence 68999999999999999976432 23589999999999999999999997 899999999999
Q ss_pred EEcCCCcEEEecCCCCcccccccc--cccCCCCCC--------cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchH
Q 004232 625 LLNEHRIAKLSDYGLSIVSEDINS--VGGKQEDPN--------SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQ 693 (766)
Q Consensus 625 Lld~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~--------~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~ 693 (766)
|||+++++||+|||+|+....... .......+. ....++.++|||||||+||||+| |+.||..... .
T Consensus 190 Ll~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~ 267 (329)
T 4aoj_A 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--T 267 (329)
T ss_dssp EEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--H
T ss_pred EECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--H
Confidence 999999999999999976532211 111111111 12346678999999999999999 8999874332 2
Q ss_pred HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 694 EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 694 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
+.+..+.. +...+ .| ...+ ..+.+|+.+||+.||++||||+||+++|+.+.+...
T Consensus 268 ~~~~~i~~-g~~~~--~p---~~~~----~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 268 EAIDCITQ-GRELE--RP---RACP----PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HHHHHHHH-TCCCC--CC---TTCC----HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHc-CCCCC--Cc---cccc----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 22222221 11111 11 1112 347789999999999999999999999999887543
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.4e-50 Score=423.34 Aligned_cols=252 Identities=23% Similarity=0.408 Sum_probs=195.6
Q ss_pred cCCCcCCceecCCceeEEEEEec------CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|.+.+.||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD---- 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC----
Confidence 56778899999999999999863 47889999998777777789999999999999999999999998763
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENT----------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
.++||||||++|+|.++|++.. ....++|.+++.++.|||+||+|||+. +|+||||||+|||+
T Consensus 89 ----~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl 161 (299)
T 4asz_A 89 ----PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLV 161 (299)
T ss_dssp ----SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred ----EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEE
Confidence 6899999999999999997642 234699999999999999999999997 89999999999999
Q ss_pred cCCCcEEEecCCCCccccccccc--cc----C----CCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHH
Q 004232 627 NEHRIAKLSDYGLSIVSEDINSV--GG----K----QEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEE 695 (766)
Q Consensus 627 d~~~~~kl~DFGla~~~~~~~~~--~~----~----~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~ 695 (766)
++++++||+|||+|+........ .. + .++......++.++|||||||++|||+| |+.||..... .+.
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~ 239 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEV 239 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHH
T ss_pred CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHH
Confidence 99999999999999764332111 11 0 0111112456778999999999999999 8999874332 222
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
+..+.. +...+. | ...+ ..+.+|+.+||+.||++||||+||++.|+.+.+..
T Consensus 240 ~~~i~~-~~~~~~--p---~~~~----~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~ 291 (299)
T 4asz_A 240 IECITQ-GRVLQR--P---RTCP----QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKAS 291 (299)
T ss_dssp HHHHHH-TCCCCC--C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHc-CCCCCC--C---ccch----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 222221 111111 1 1122 34778999999999999999999999999887643
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.3e-49 Score=416.04 Aligned_cols=248 Identities=22% Similarity=0.365 Sum_probs=189.3
Q ss_pred cCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
.++++.+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~--- 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ--- 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC---
Confidence 34566789999999999999863 46889999997543 334678999999999999999999999998763
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCC
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTN 622 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~ 622 (766)
.++||||||++|+|.++|+...+ ...++|.+++.++.|||+||+|||+. +||||||||+
T Consensus 103 -----~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~ 174 (308)
T 4gt4_A 103 -----PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATR 174 (308)
T ss_dssp -----SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred -----EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCcccc
Confidence 68999999999999999975432 13589999999999999999999997 8999999999
Q ss_pred ceEEcCCCcEEEecCCCCccccccccc--ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccc
Q 004232 623 NILLNEHRIAKLSDYGLSIVSEDINSV--GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQF 691 (766)
Q Consensus 623 NILld~~~~~kl~DFGla~~~~~~~~~--~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~ 691 (766)
|||||+++++||+|||+|+........ ......+..| ..++.++|||||||+||||+| |+.||.....
T Consensus 175 NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~- 253 (308)
T 4gt4_A 175 NVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN- 253 (308)
T ss_dssp GEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-
T ss_pred ceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-
Confidence 999999999999999999765332111 1111111122 456778999999999999999 8999874332
Q ss_pred hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 692 LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
.+....+. .+...+.. .. +...+.+|+.+||+.||++||||+||+++|+..
T Consensus 254 -~~~~~~i~-~~~~~~~p-----~~----~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 254 -QDVVEMIR-NRQVLPCP-----DD----CPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -HHHHHHHH-TTCCCCCC-----TT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred -HHHHHHHH-cCCCCCCc-----cc----chHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22222222 11111111 11 223477899999999999999999999999853
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5e-48 Score=406.87 Aligned_cols=250 Identities=19% Similarity=0.353 Sum_probs=187.5
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.+++.+.+.||+|+||+||+|++.. .||||+++.. .....++|.+|+++|++++|||||+++|+|.++
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~-------- 104 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-------- 104 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC--------
Confidence 3567788999999999999998753 5999998753 344567899999999999999999999998653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
.++||||||++|+|.++|+... ..++|.+++.|+.|||+||+|||+. +||||||||+|||||+++++||+|||+
T Consensus 105 -~~~iVmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGl 178 (307)
T 3omv_A 105 -NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp -SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSS
T ss_pred -eEEEEEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccC
Confidence 4799999999999999997643 3489999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc------ccCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 640 SIVSEDINSV------GGKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 640 a~~~~~~~~~------~~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|+........ .++. ..|.. ...++.++|||||||+||||+||+.||...... ..+........
T Consensus 179 a~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~--~~~~~~~~~~~-- 254 (307)
T 3omv_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFMVGRGY-- 254 (307)
T ss_dssp CBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHHHHTTC--
T ss_pred ceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcCC--
Confidence 9765322110 1111 11111 123566899999999999999999999743221 11111111111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
..|.... ........+.+|+.+||+.||++||||.||+++|+.+.
T Consensus 255 --~~p~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 255 --ASPDLSK-LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp --CCCCSTT-SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred --CCCCccc-ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 1111100 01111234778999999999999999999999998764
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-47 Score=404.41 Aligned_cols=260 Identities=16% Similarity=0.311 Sum_probs=188.8
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+|.+.+.||+|+||+||+|++ +|+.||||+++..... ...++.|+..+.+++|||||+++|+|.++++. ...+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~----~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGT----WTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS----SEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCC----ceEE
Confidence 3466788999999999999998 5899999999654322 23345567777889999999999999875421 1368
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG-----VIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
|||||||++|+|.+++++. .++|..+.+++.|+|+||+|||++ ..++|+||||||+|||||+++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999764 389999999999999999999986 2468999999999999999999999999
Q ss_pred CCCccccccccccc----CCCCCCcccC--------------CCCCCCEeehhHHHHHHhcCCCccccCccc--------
Q 004232 638 GLSIVSEDINSVGG----KQEDPNSWEM--------------TKLEDDVFSFGFMLLESVAGPSVAARKGQF-------- 691 (766)
Q Consensus 638 Gla~~~~~~~~~~~----~~~~~~~~~~--------------~~~~~DV~SfGvil~ElltG~~p~~~~~~~-------- 691 (766)
|+|+.......... ....+..|.. ++.++|||||||++|||+||+.|+......
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 99976543221100 0001111211 234789999999999999998776432110
Q ss_pred ----hHHHHhhhhcccCccccccccccCC-CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 692 ----LQEELDSLNSQEGRQRLVDPVVMAT-SSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 692 ----~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
....+...... +..+|.+... ...+....+.+|+.+||+.||++||||.||+++|+++.+-
T Consensus 233 ~~~~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CSSCCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cccchHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 11111111111 1112222111 1224556688999999999999999999999999998753
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1e-47 Score=413.30 Aligned_cols=264 Identities=23% Similarity=0.351 Sum_probs=200.2
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCC-CCcccc
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRH-PHLVCL 544 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~H-pniv~l 544 (766)
+..++++...++|++.+.||+|+||+||+|++. .++.||||+++... ....+.|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 344566666788999999999999999999854 24679999997643 3446789999999999976 899999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVI 611 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 611 (766)
+|+|.+++ +.+++|||||++|+|.++|++... ...++|.+++.++.|||+||+|||++
T Consensus 134 ~g~~~~~~-------~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-- 204 (353)
T 4ase_A 134 LGACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-- 204 (353)
T ss_dssp EEEECCTT-------SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred EEEEEecC-------CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC--
Confidence 99998754 357999999999999999975321 23589999999999999999999997
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCccccccccc--ccCCCCCC--------cccCCCCCCCEeehhHHHHHHhc-
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV--GGKQEDPN--------SWEMTKLEDDVFSFGFMLLESVA- 680 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~--~~~~~~~~--------~~~~~~~~~DV~SfGvil~Ellt- 680 (766)
+||||||||+|||+++++++||+|||+|+........ ......+. ....++.++|||||||+||||+|
T Consensus 205 -~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~ 283 (353)
T 4ase_A 205 -KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 283 (353)
T ss_dssp -TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred -CeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhC
Confidence 8999999999999999999999999999765322111 01000111 12456778999999999999998
Q ss_pred CCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 681 GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 681 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
|+.||...... ..+......+...+..+ ..+ ..+.+++.+||+.||++||||+||++.|+.+.+..
T Consensus 284 G~~Pf~~~~~~--~~~~~~i~~g~~~~~p~-----~~~----~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 284 GASPYPGVKID--EEFCRRLKEGTRMRAPD-----YTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp SCCSSTTCCCS--HHHHHHHHHTCCCCCCT-----TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCHH--HHHHHHHHcCCCCCCCc-----cCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 89998743221 11111212221111111 112 34778999999999999999999999999987644
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-45 Score=383.67 Aligned_cols=244 Identities=23% Similarity=0.286 Sum_probs=182.5
Q ss_pred CcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 486 DMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 486 ~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++.+.||+|+||+||+|+.. ++..||||++... .....+.|.+|+++|++++|||||+++++|.+.... ...+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~----~~~~ 104 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG----KKCI 104 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETT----EEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCC----CcEE
Confidence 55678999999999999864 6899999998643 344567899999999999999999999998753210 1358
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CCCcEEEecCCCCc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLSI 641 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DFGla~ 641 (766)
|||||||++|+|.+++.+.. .+++.....++.||+.||+|||++. ++|+||||||+||||+ .++.+||+|||+|+
T Consensus 105 ~lvmEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 99999999999999998653 4899999999999999999999862 3599999999999998 47999999999997
Q ss_pred cccccccc--ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 642 VSEDINSV--GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 642 ~~~~~~~~--~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
........ .+++ ++.. ...++.++|||||||++|||+||+.||..... .......+.. .......+ .
T Consensus 181 ~~~~~~~~~~~GTp~YmAPE~~-~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~-~~~~~~~i~~-~~~~~~~~----~ 253 (290)
T 3fpq_A 181 LKRASFAKAVIGTPEFMAPEMY-EEKYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRVTS-GVKPASFD----K 253 (290)
T ss_dssp GCCTTSBEESCSSCCCCCGGGG-GTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHHTT-TCCCGGGG----G
T ss_pred eCCCCccCCcccCccccCHHHc-CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-HHHHHHHHHc-CCCCCCCC----c
Confidence 64432211 1111 1111 13467789999999999999999999964322 1111222211 11111111 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+ ..+.+|+.+||+.||++|||++|+++
T Consensus 254 ~~~----~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 254 VAI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111 23678999999999999999999875
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-45 Score=394.44 Aligned_cols=243 Identities=19% Similarity=0.290 Sum_probs=183.9
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~------ 96 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG------ 96 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC------
Confidence 36799999999999999999985 57999999999654 3345678999999999999999999999998764
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+|||||||++|+|.+++.... ...+++.+...++.||+.||+|||++ +|+||||||+||||+.++.+||+|||
T Consensus 97 --~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 97 --SLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp --EEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTT
T ss_pred --EEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccc
Confidence 7899999999999999997543 23478888999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc----cccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINS----VGGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~----~~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+|+....... ..++. ++......++.++||||+||++|||+||+.||..... ...+..+.... ...
T Consensus 171 la~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~-~~~--- 244 (350)
T 4b9d_A 171 IARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KNLVLKIISGS-FPP--- 244 (350)
T ss_dssp EESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTC-CCC---
T ss_pred cceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcCC-CCC---
Confidence 9986543211 11111 1111224466789999999999999999999974332 22222222211 111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.....+ ..+.+|+.+||+.||++|||++|+++
T Consensus 245 --~~~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 245 --VSLHYS----YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCccCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 111122 23678999999999999999999976
No 9
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-45 Score=393.06 Aligned_cols=242 Identities=21% Similarity=0.304 Sum_probs=188.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
..|+..+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+.+ .
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~--------~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD--------E 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT--------E
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC--------E
Confidence 46888899999999999999864 79999999997655555567899999999999999999999998864 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+|||||||++|+|.+++.+. .+++.+...++.||+.||+|||++ +|+||||||+|||++.++++||+|||+|+
T Consensus 146 ~~ivmEy~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEECCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 99999999999999999753 388999999999999999999998 89999999999999999999999999997
Q ss_pred cccccccc----ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccc
Q 004232 642 VSEDINSV----GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVV 713 (766)
Q Consensus 642 ~~~~~~~~----~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 713 (766)
........ .++. ++......++.++||||+||++|||+||+.||..... ...+..+... ....+..+
T Consensus 219 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~-~~~~~~~~-- 293 (346)
T 4fih_A 219 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDN-LPPRLKNL-- 293 (346)
T ss_dssp ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHS-SCCCCSCG--
T ss_pred ecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcC-CCCCCCcc--
Confidence 65432111 1111 1111224467789999999999999999999974332 2222222211 11111111
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ ..+.+|+.+||+.||++|||++|+++.
T Consensus 294 -~~~s----~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 294 -HKVS----PSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp -GGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -ccCC----HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111 236789999999999999999998753
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=9e-46 Score=393.44 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=186.5
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.|+..+.||+|+||+||+|+. .+|+.||||+++.... ..+|+.+|++++|||||++++++.+.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-------- 123 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-------- 123 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT--------
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC--------
Confidence 34677788999999999999996 4699999999975432 246999999999999999999998763
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DFGl 639 (766)
.+|||||||++|+|.+++++.. .+++.+...++.||+.||+|||++ +||||||||+|||++.++ ++||+|||+
T Consensus 124 ~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGl 197 (336)
T 4g3f_A 124 WVNIFMELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGH 197 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTT
T ss_pred EEEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCC
Confidence 7899999999999999998654 489999999999999999999997 899999999999999887 699999999
Q ss_pred Ccccccccc---------cccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCc
Q 004232 640 SIVSEDINS---------VGGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGR 705 (766)
Q Consensus 640 a~~~~~~~~---------~~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~ 705 (766)
|+....... ..++. ++......++.++|||||||++|||+||+.||...... .... +.....
T Consensus 198 a~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~---i~~~~~- 273 (336)
T 4g3f_A 198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK---IASEPP- 273 (336)
T ss_dssp CEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHH---HHHSCC-
T ss_pred CeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH---HHcCCC-
Confidence 976533211 00111 11112245677899999999999999999999743321 1111 111110
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.. +.+....+ ..+.+++.+||+.||.+|||+.|+++.|+.+.+
T Consensus 274 -~~--~~~~~~~s----~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~ 316 (336)
T 4g3f_A 274 -PI--REIPPSCA----PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQ 316 (336)
T ss_dssp -GG--GGSCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -Cc--hhcCccCC----HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence 00 01111112 236788999999999999999999999988765
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-44 Score=371.77 Aligned_cols=239 Identities=22% Similarity=0.341 Sum_probs=176.8
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~------ 86 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD------ 86 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC------
Confidence 6899999999999999999985 579999999996542 233567999999999999999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+|+||||+ +|+|.+++.+.. .+++.+...++.||+.||+|||++ +|+||||||+|||+++++++||+|||
T Consensus 87 --~~~ivmEy~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 87 --EIIMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp --EEEEEEECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred --EEEEEEeCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecC
Confidence 789999999 689999997654 489999999999999999999998 89999999999999999999999999
Q ss_pred CCcccccccccc---cCCC--CCC--cccC-CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSVG---GKQE--DPN--SWEM-TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~~---~~~~--~~~--~~~~-~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+|+...+..... ++.. .|. .... .+.++||||+||++|||+||+.||..... ......+.... ..+
T Consensus 158 la~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i~~~~--~~~-- 231 (275)
T 3hyh_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNGV--YTL-- 231 (275)
T ss_dssp CC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC--CCC--
T ss_pred CCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCC--CCC--
Confidence 997654322111 1111 111 1122 34678999999999999999999974332 22222222111 111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
| ...+ ..+.+++.+|++.||++|||++|+++.
T Consensus 232 p---~~~s----~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 232 P---KFLS----PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C---TTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred C---CCCC----HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1 1112 236789999999999999999999763
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=393.56 Aligned_cols=243 Identities=21% Similarity=0.299 Sum_probs=189.0
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.|+..+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-------- 221 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-------- 221 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT--------
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC--------
Confidence 35689999999999999999996 479999999997665555667899999999999999999999998864
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
.+|||||||++|+|.+++... .+++.+...++.||+.||+|||++ +||||||||+||||+.++.+||+|||+|
T Consensus 222 ~~~iVmEy~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla 294 (423)
T 4fie_A 222 ELWVVMEFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 294 (423)
T ss_dssp EEEEEEECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccc
Confidence 799999999999999998754 388999999999999999999998 8999999999999999999999999999
Q ss_pred ccccccccc----ccCCC----CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSV----GGKQE----DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~----~~~~~----~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
+........ .++.. +......++.++|||||||++|||++|+.||..... ...+..+... ....+..+
T Consensus 295 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~-~~~~~~~~- 370 (423)
T 4fie_A 295 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDN-LPPRLKNL- 370 (423)
T ss_dssp EECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHS-CCCCCSCT-
T ss_pred eECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHcC-CCCCCccc-
Confidence 765432111 11111 111224467789999999999999999999974332 2222222211 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ ..+.+|+.+||+.||.+|||+.|+++.
T Consensus 371 --~~~s----~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 371 --HKVS----PSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp --TSSC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --ccCC----HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1112 236789999999999999999998763
No 13
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.7e-44 Score=377.44 Aligned_cols=238 Identities=19% Similarity=0.278 Sum_probs=186.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~------ 105 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE------ 105 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC------
Confidence 5799999999999999999985 579999999997542 234678999999999999999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+|+|||||++|+|.+++.+.. .++......++.||+.||+|||++ +|+||||||+|||++.++++||+|||
T Consensus 106 --~~yivmEy~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 106 --KLYFGLSYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp --EEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 7999999999999999998653 388999999999999999999998 89999999999999999999999999
Q ss_pred CCcccccccc---cccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 639 LSIVSEDINS---VGGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 639 la~~~~~~~~---~~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
+|+....... .....+++. ....++.++||||+||++|||+||+.||..... ...+..+.... ..+
T Consensus 178 la~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~~~--~~~ 253 (311)
T 4aw0_A 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIKLE--YDF 253 (311)
T ss_dssp TCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC--CCC
T ss_pred CceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcCC--CCC
Confidence 9986532211 111111111 123456789999999999999999999974332 22222222211 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDIL 747 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~ 747 (766)
. ...+ ..+.+|+.+|++.||++|||++|+.
T Consensus 254 p-----~~~s----~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 254 P-----EKFF----PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp C-----TTCC----HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred C-----cccC----HHHHHHHHHHccCCHhHCcChHHHc
Confidence 1 1112 2367899999999999999999874
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.7e-44 Score=376.48 Aligned_cols=234 Identities=23% Similarity=0.335 Sum_probs=174.3
Q ss_pred cCCCcCCceecCCceeEEEEEe----cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|++.+.||+|+||+||+|+. .+++.||||+++... .....++.+|+++|++++|||||++++++.+++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~---- 99 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG---- 99 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC----
Confidence 5699999999999999999985 247889999997542 223446888999999999999999999998764
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
.+|+|||||++|+|.+++.+.. .+++.+...++.||+.||+|||++ +|+||||||+|||++.++++||+|
T Consensus 100 ----~~~ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 100 ----KLYLILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp ----EEEEEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred ----EEEEEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 7999999999999999998654 488999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc-ccCCCCC-------CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSV-GGKQEDP-------NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~-~~~~~~~-------~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||+|+...+.... .+..+++ .....++.++||||+||++|||+||+.||..... .+.+..+.... ..+
T Consensus 170 FGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~--~~~ 245 (304)
T 3ubd_A 170 FGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMILKAK--LGM 245 (304)
T ss_dssp SEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CCC
T ss_pred cccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHHHcCC--CCC
Confidence 9999754322111 1111111 1224567789999999999999999999974332 22222222211 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
| ...+ ..+.+|+.+||+.||++|||+
T Consensus 246 --p---~~~s----~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 246 --P---QFLS----PEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp --C---TTSC----HHHHHHHHHHTCSSGGGSTTC
T ss_pred --C---CcCC----HHHHHHHHHHcccCHHHCCCC
Confidence 1 1112 236789999999999999984
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.8e-43 Score=371.24 Aligned_cols=250 Identities=17% Similarity=0.298 Sum_probs=176.7
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC---
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD--- 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~--- 556 (766)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+....
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 35689999999999999999985 479999999986443 3446789999999999999999999999876542100
Q ss_pred -cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 557 -YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 557 -~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
.....+|+|||||++|+|.+++.+.......++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 00124799999999999999998765444467777889999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccccc----------------ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH
Q 004232 636 DYGLSIVSEDINSV----------------GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE 695 (766)
Q Consensus 636 DFGla~~~~~~~~~----------------~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~ 695 (766)
|||+|+........ .++. ++......++.++|||||||++|||++ ||.... .....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~~~~ 236 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRT 236 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HHHHH
Confidence 99999765332110 0111 111112456778999999999999997 554211 11111
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+..+.. ... |.. ..+......+++.+||+.||.+|||+.|+++
T Consensus 237 ~~~~~~-~~~-----p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 LTDVRN-LKF-----PPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHT-TCC-----CHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhc-CCC-----CCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111 001 100 0112233567899999999999999999976
No 16
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.9e-42 Score=364.67 Aligned_cols=295 Identities=26% Similarity=0.426 Sum_probs=251.0
Q ss_pred CCChHHHHHHHHHHHcCCCCCCCCCccCCCCCCCC--CCCCCccceEecC----CCEEEEEeCCCCCCCCCCCCcccccc
Q 004232 25 QLQSSQTQVLLQLRKHLEYPKQLEIWINHGADFCY--ISSSTQVNITCQD----NFITELKIIGDKPSNVGNFDGFASAN 98 (766)
Q Consensus 25 ~~~~~~~~aLl~~k~~~~~~~~l~~W~~~~~~~C~--~~~~~~~gv~C~~----~~v~~l~l~~~~~~~~~~~~~~~~~~ 98 (766)
.|.++|++||++||+++.+|..+++|+.+ .+||. | .||.|.. ++|+.+++.+..+.+.
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~~l~~W~~~-~~~C~~~w-----~gv~C~~~~~~~~l~~L~L~~~~l~~~---------- 65 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPTTLSSWLPT-TDCCNRTW-----LGVLCDTDTQTYRVNNLDLSGLNLPKP---------- 65 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCGGGTTCCTT-SCTTTTCS-----TTEEECCSSSCCCEEEEEEECCCCSSC----------
T ss_pred CCCHHHHHHHHHHHHhcCCcccccCCCCC-CCCCcCCC-----cceEeCCCCCCceEEEEECCCCCccCC----------
Confidence 47889999999999999888788999764 78998 6 4799964 6788888876543210
Q ss_pred ccCCCcccCCcccccccCCCCCCEEeccc-ccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCc
Q 004232 99 ASLSENFSIDSFVTTLARLTSLRVLSLVS-LGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF 177 (766)
Q Consensus 99 ~~l~~n~~~~~~~~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 177 (766)
..+|..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.
T Consensus 66 ---------~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (313)
T 1ogq_A 66 ---------YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136 (313)
T ss_dssp ---------EECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred ---------cccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCc
Confidence 04567888899999999984 88888999999999999999999999988889889999999999999999
Q ss_pred CCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCC-CCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCC
Q 004232 178 FNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIS-TLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPK 255 (766)
Q Consensus 178 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~ 255 (766)
+++.+|..|+++++|++|+|++|++++.+|..+..++ +|++|+|++|.+++.+|. +..++ |++|++++|
T Consensus 137 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N-------- 207 (313)
T 1ogq_A 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN-------- 207 (313)
T ss_dssp EESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS--------
T ss_pred cCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC--------
Confidence 9888898899999999999999999888898888887 889999999988876664 55554 666665554
Q ss_pred CCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEE
Q 004232 256 LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFF 335 (766)
Q Consensus 256 ~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L 335 (766)
++++.+|..|+.+++|+.|++++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|
T Consensus 208 -------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 273 (313)
T 1ogq_A 208 -------------MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273 (313)
T ss_dssp -------------EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEE
T ss_pred -------------cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEE
Confidence 55567788899999999999999999988875 8889999999999999999999999999999999
Q ss_pred eCcCCccccCCCCCCCCCCCCceeecCCCc-CCC
Q 004232 336 DISNNKLTGGLPSCLSNESDKRVVKFRGNC-LSS 368 (766)
Q Consensus 336 ~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~-l~~ 368 (766)
++++|+++|.+|.. ..+++++.+++.+|. ++|
T Consensus 274 ~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 274 NVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp ECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred ECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 99999999999987 788899999999997 665
No 17
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-41 Score=405.80 Aligned_cols=338 Identities=26% Similarity=0.333 Sum_probs=213.2
Q ss_pred hcccCCCChHHHHHHHHHHHcCCCCCCCCCccCCCCCCCCCCCCCccceEecCCCEEEEEeCCCCCCCC--------CCC
Q 004232 20 PLGTHQLQSSQTQVLLQLRKHLEYPKQLEIWINHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNV--------GNF 91 (766)
Q Consensus 20 ~~~~~~~~~~~~~aLl~~k~~~~~~~~l~~W~~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~--------~~~ 91 (766)
..+++++.++|++||++||+++.||..+++|+.+ .|||.|. ||+|+.++|+++++++..+.+. ..+
T Consensus 3 ~~~~~~~~~~~~~all~~k~~~~~~~~l~~W~~~-~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 3 QASPSQSLYREIHQLISFKDVLPDKNLLPDWSSN-KNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp -----CCHHHHHHHHHHHHTTCSCTTSSTTCCTT-SCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred cCccccCCHHHHHHHHHHHhhCCCcccccCCCCC-CCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhcc
Confidence 3445556788999999999999888788999854 7999985 6999988999999988765542 111
Q ss_pred CccccccccCCCcccCCc--ccccccCCCCCCEEecccccccccCCc--cccCCCCCCEEecccccCccCCCccC-CCCC
Q 004232 92 DGFASANASLSENFSIDS--FVTTLARLTSLRVLSLVSLGIWGSLPD--KIHRLYSLEYLDLSSNFLFGSVPPKI-STMV 166 (766)
Q Consensus 92 ~~~~~~~~~l~~n~~~~~--~~~~l~~l~~L~~L~L~~n~l~~~~p~--~~~~L~~L~~L~Ls~N~l~~~~p~~~-~~l~ 166 (766)
..+ ++..+...+. +|..++++++|++|+|++|.+.|.+|. .|+++++|++|||++|.+.+.+|..+ .+++
T Consensus 77 ~~L-----~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~ 151 (768)
T 3rgz_A 77 TGL-----ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLN 151 (768)
T ss_dssp TTC-----CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCT
T ss_pred Ccc-----cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCC
Confidence 111 1111111122 335677777777777777777776666 67777777777777777766666554 5666
Q ss_pred CCCEEEccCCcCCCCCCcc---cCC----------------------CCCCCEEEccCccCCCCCCccccCCCCCCEEEc
Q 004232 167 KLQTLILDDNFFNNTIPNW---FDS----------------------LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDL 221 (766)
Q Consensus 167 ~L~~L~L~~N~l~~~~p~~---~~~----------------------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 221 (766)
+|++|+|++|.+++..|.. +++ +++|++|+|++|++++.+|. ++++++|++|+|
T Consensus 152 ~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 152 SLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp TCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred CCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 6666666666666555544 444 44445555555555544444 555555555555
Q ss_pred cCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC-CCCCcEEEccCCcCccCCcccccCC-CCCCEEEccCCcCCCCC
Q 004232 222 SKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL-PRGLVMAFLSNNSFSGEIPKQYGQL-NQLQQLDMSFNALRGMP 298 (766)
Q Consensus 222 s~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~l~ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~ 298 (766)
++|.+++.+|. +..+++|++|++++|.+++.+|.. ..+|+.+++++|+++|.+|..+... ++|++|++++|++++.+
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~ 310 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAV 310 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECC
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCcc
Confidence 55555544442 455555555555555555544443 2456666666666666666666554 66777777777777666
Q ss_pred ccccCCCCCCCeEEeecCcCcccCCcc-CCCCCCccEEeCcCCccccCCCCCCCCCC-CCceeecCCCcCCCC
Q 004232 299 PPAIFSLPNISDLNLASNKFSGSLPKN-LNCGGKLVFFDISNNKLTGGLPSCLSNES-DKRVVKFRGNCLSSN 369 (766)
Q Consensus 299 ~~~~~~l~~L~~L~L~~N~l~g~~p~~-~~~~~~L~~L~ls~N~l~g~~p~~~~~~~-~l~~l~l~~N~l~~~ 369 (766)
|..+.++++|+.|+|++|+++|.+|.. +..+++|+.|++++|+++|.+|..+..++ +++.+++++|.+++.
T Consensus 311 p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 311 PPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred chHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 666667777777777777776666654 66666777777777777666666666655 666666666666543
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.6e-41 Score=358.99 Aligned_cols=276 Identities=33% Similarity=0.586 Sum_probs=216.5
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCC
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~ 552 (766)
+.+.++..++++|+..+.||+|+||.||+|+..+|+.||||++........+.+.+|+.++++++||||++++++|.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34445566789999999999999999999998889999999988766666788999999999999999999999987653
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
..++||||+++|+|.+++.... ....++|..+..++.+++.||+|||+. +|+||||||+||+++.++.
T Consensus 109 --------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 109 --------EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFV 177 (321)
T ss_dssp --------CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCC
T ss_pred --------eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCC
Confidence 6799999999999999997543 223589999999999999999999997 8999999999999999999
Q ss_pred EEEecCCCCccccccccc-------cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc----chHHHHh
Q 004232 632 AKLSDYGLSIVSEDINSV-------GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ----FLQEELD 697 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~-------~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~----~~~~~~~ 697 (766)
+||+|||+++........ +. ..++......++.++|||||||++|||+||+.|+..... ....+..
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~ 257 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257 (321)
T ss_dssp EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence 999999998654321110 00 001101123456789999999999999999999864321 1222222
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
..........+.++........+....+.+++.+||+.||.+|||+.||++.|+.+...++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~~ 319 (321)
T 2qkw_B 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319 (321)
T ss_dssp HHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSCC
T ss_pred hccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcccC
Confidence 22222334455566555555567777899999999999999999999999999999876654
No 19
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.7e-41 Score=359.20 Aligned_cols=278 Identities=27% Similarity=0.468 Sum_probs=219.1
Q ss_pred ccccCHHHHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhh-hHHHHHHHHHHHHhCCCCCccccccee
Q 004232 470 CRSFTLEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKY-TVRNLKLRLDLLAKLRHPHLVCLLGHC 548 (766)
Q Consensus 470 ~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~~e~~~l~~l~Hpniv~l~g~~ 548 (766)
.+.++++++....++|+..+.||+|+||.||+|+..+|+.||||++...... ....+.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 4568899999999999999999999999999999888999999999765322 234689999999999999999999999
Q ss_pred ecCCCCCCcCcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc
Q 004232 549 IDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (766)
Q Consensus 549 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 627 (766)
.+.+ ..++||||+++|+|.+++.+.. ....++|..+..++.+++.||+|||+.+.++|+||||||+||+++
T Consensus 97 ~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 97 MTPT--------ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp CCSS--------CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred ecCC--------ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 8753 5799999999999999997653 234589999999999999999999998667899999999999999
Q ss_pred CCCcEEEecCCCCccccccccccc--CCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCcccc------Cccch
Q 004232 628 EHRIAKLSDYGLSIVSEDINSVGG--KQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAAR------KGQFL 692 (766)
Q Consensus 628 ~~~~~kl~DFGla~~~~~~~~~~~--~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~------~~~~~ 692 (766)
.++.+||+|||++........... ....+. ....++.++|||||||++|||+||+.||.. .....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 248 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBH
T ss_pred CCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhH
Confidence 999999999999975432211100 000110 112345678999999999999999999852 11223
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..+............+.++........+....+.+++.+||+.||.+|||+.||+++|+....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 249 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp HHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred HHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 344443333444555666655556667778889999999999999999999999999987543
No 20
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=361.07 Aligned_cols=257 Identities=17% Similarity=0.252 Sum_probs=183.7
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.....-. ..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~--~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG--EF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTT--TC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccc--cC
Confidence 5699999999999999999985 579999999997542 344577889999999999999999999887542100 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..+|||||||+ |+|.+++.+.. .+++.....++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 46899999996 78999997643 489999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccc--------ccccCCC--CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCc
Q 004232 640 SIVSEDIN--------SVGGKQE--DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGR 705 (766)
Q Consensus 640 a~~~~~~~--------~~~~~~~--~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (766)
|+...... +..++.. .|. ....++.++||||+||++|||+||+.||....... ...+.........
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 97542211 0111111 111 11235678899999999999999999997543211 1111111100000
Q ss_pred cc-----------ccc--ccccCCCCHHH-----HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QR-----------LVD--PVVMATSSLES-----LSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~-----------~~d--~~~~~~~~~~~-----~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ... +.. .....+. -..+.+|+.+|++.||.+|||+.|+++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPR-QPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GGTC-----CHHHHHHSSCCC-CCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHhhhhhhhhhhhhhhcCCCc-CCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00 000 000 0001111 1346789999999999999999998753
No 21
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.1e-39 Score=353.24 Aligned_cols=191 Identities=18% Similarity=0.298 Sum_probs=153.4
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEec----CCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCC
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~ 553 (766)
....+.|++.+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++|+++ +|||||++++++.+.+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~- 93 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND- 93 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT-
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC-
Confidence 344678999999999999999999742 57889999986543 235678999999998 6999999999988763
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIA 632 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~ 632 (766)
.+|+|||||++|+|.+++. .+++.+...++.|++.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 94 -------~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~ 157 (361)
T 4f9c_A 94 -------HVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKY 157 (361)
T ss_dssp -------EEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred -------EEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeE
Confidence 7999999999999999884 278899999999999999999998 89999999999999976 799
Q ss_pred EEecCCCCccccccccc-----------------------------ccCCCCCCc--------ccCCCCCCCEeehhHHH
Q 004232 633 KLSDYGLSIVSEDINSV-----------------------------GGKQEDPNS--------WEMTKLEDDVFSFGFML 675 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~-----------------------------~~~~~~~~~--------~~~~~~~~DV~SfGvil 675 (766)
||+|||+|+...+.... ....+++.+ ...++.++||||+||++
T Consensus 158 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il 237 (361)
T 4f9c_A 158 ALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237 (361)
T ss_dssp EECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred EECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHH
Confidence 99999999654321100 000011111 12355678999999999
Q ss_pred HHHhcCCCccccC
Q 004232 676 LESVAGPSVAARK 688 (766)
Q Consensus 676 ~ElltG~~p~~~~ 688 (766)
|||+||+.||...
T Consensus 238 ~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 238 LSLLSGRYPFYKA 250 (361)
T ss_dssp HHHHHTCSSSSCC
T ss_pred HHHHHCCCCCCCC
Confidence 9999999998643
No 22
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.8e-39 Score=369.84 Aligned_cols=245 Identities=20% Similarity=0.327 Sum_probs=189.6
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++.+.+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-------- 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-------- 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS--------
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--------
Confidence 46899999999999999999985 479999999998766666788999999999999999999999998763
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC--CcEEEecCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH--RIAKLSDYG 638 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~--~~~kl~DFG 638 (766)
.+|||||||++|+|.+++.+.. ..+++.+...++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEEEEeecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 7999999999999999986532 2488999999999999999999998 89999999999999854 899999999
Q ss_pred CCcccccccccc---cCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 639 LSIVSEDINSVG---GKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 639 la~~~~~~~~~~---~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+|+......... ++. ++......++.++||||+||++|||++|+.||..... .+.+..+.... ..+.++
T Consensus 303 ~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~i~~~~--~~~~~~ 378 (573)
T 3uto_A 303 LTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSCD--WNMDDS 378 (573)
T ss_dssp SCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTC--CCCCSG
T ss_pred ceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHhCC--CCCCcc
Confidence 998764332211 111 1111123456678999999999999999999974332 22222222111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ....+ ..+.+|+.+||+.||.+|||+.|+++
T Consensus 379 ~-~~~~s----~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 379 A-FSGIS----EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp G-GTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-ccCCC----HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11122 23678999999999999999999876
No 23
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=6.8e-38 Score=333.15 Aligned_cols=272 Identities=29% Similarity=0.487 Sum_probs=207.8
Q ss_pred ccccCHHHHHHHhcCCCcC------CceecCCceeEEEEEecCCceEEEEEccCC----hhhhHHHHHHHHHHHHhCCCC
Q 004232 470 CRSFTLEELKEATNNFDMS------AIMGEGSYGKLYKGRLENGTSVAIRCLPSS----KKYTVRNLKLRLDLLAKLRHP 539 (766)
Q Consensus 470 ~~~~~~~~l~~~~~~f~~~------~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~----~~~~~~~~~~e~~~l~~l~Hp 539 (766)
...|+++++..++++|... +.||+|+||.||+|+. +++.||||++... .....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3568999999999999877 8899999999999986 5889999998653 233467899999999999999
Q ss_pred CcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 004232 540 HLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRV 619 (766)
Q Consensus 540 niv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdl 619 (766)
||+++++++.+.+ ..++||||+++|+|.+++........++|..+..++.+++.||+|||+. +|+||||
T Consensus 91 ~i~~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl 159 (307)
T 2nru_A 91 NLVELLGFSSDGD--------DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDI 159 (307)
T ss_dssp TBCCEEEEECSSS--------SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CeEEEEEEEecCC--------ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCC
Confidence 9999999998753 5799999999999999987544445689999999999999999999997 8999999
Q ss_pred CCCceEEcCCCcEEEecCCCCccccccccc---ccCCCCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCcc
Q 004232 620 KTNNILLNEHRIAKLSDYGLSIVSEDINSV---GGKQEDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ 690 (766)
Q Consensus 620 k~~NILld~~~~~kl~DFGla~~~~~~~~~---~~~~~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~ 690 (766)
||+||+++.++.+||+|||++......... ......+.+ ...++.++|||||||++|||+||..|+.....
T Consensus 160 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 239 (307)
T 2nru_A 160 KSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239 (307)
T ss_dssp CGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred CHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence 999999999999999999998654332110 000000000 01245688999999999999999999874321
Q ss_pred --chHHHHhhhhcc-cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 691 --FLQEELDSLNSQ-EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 691 --~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
........+... ......+++.. ..........+.+++.+||+.||.+||+++||++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 240 PQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SSBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 111111111111 11222333322 2234455667889999999999999999999999999874
No 24
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.5e-39 Score=364.32 Aligned_cols=242 Identities=21% Similarity=0.317 Sum_probs=180.8
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.++|++.++||+|+||+||+|+. .+|+.||||+++.... ......+.++.+++.++|||||++++++.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~-- 265 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-- 265 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS--
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC--
Confidence 46799999999999999999986 4799999999964321 11223344567788889999999999998764
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
.+|+|||||+||+|.++|.+.. .++......++.||+.||+|||+. +||||||||+|||||.+|++||
T Consensus 266 ------~lylVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 266 ------KLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp ------EEEEEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEE
T ss_pred ------EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEe
Confidence 7999999999999999998654 388999999999999999999997 8999999999999999999999
Q ss_pred ecCCCCcccccccc--cccCCC--CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH-HhhhhcccCcc
Q 004232 635 SDYGLSIVSEDINS--VGGKQE--DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE-LDSLNSQEGRQ 706 (766)
Q Consensus 635 ~DFGla~~~~~~~~--~~~~~~--~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~-~~~~~~~~~~~ 706 (766)
+|||+|+....... ..+++. .|. ....++.++||||+||++|||+||+.||.......... ...+... ..
T Consensus 334 ~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~--~~ 411 (689)
T 3v5w_A 334 SDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--AV 411 (689)
T ss_dssp CCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHC--CC
T ss_pred cccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC--CC
Confidence 99999976543221 111111 111 11346778999999999999999999996432221111 1111111 11
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPS-----FEDILW 748 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~ 748 (766)
.+ | ...+ ..+.+|+.+|++.||.+|++ ++||.+
T Consensus 412 ~~--p---~~~S----~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 EL--P---DSFS----PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CC--C---TTSC----HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CC--C---ccCC----HHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11 1 1112 23678999999999999998 566653
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.4e-38 Score=337.06 Aligned_cols=256 Identities=22% Similarity=0.385 Sum_probs=188.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..++|++.+.||+|+||+||+|+. +|+.||||++.... ....+++.+|++++++++||||+++++++.+.+
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 107 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP------ 107 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT------
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 456788999999999999999987 58899999986543 344678999999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+......+++..+..++.|++.||+|||+.. ++|+||||||+||+++.++.+||+|||
T Consensus 108 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 108 --NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp --CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred --ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCC
Confidence 57999999999999999976543334889999999999999999999972 129999999999999999999999999
Q ss_pred CCccccccccc----ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSV----GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~----~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+++........ .++ .++.......+.++|||||||++|||+||+.||...... .....+........+
T Consensus 185 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~-- 260 (309)
T 3p86_A 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKCKRLEI-- 260 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSCCCCCC--
T ss_pred CCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCCCC--
Confidence 98654322110 011 111111234567899999999999999999998743321 111111111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
....+ ..+.+++.+||+.||.+|||+.||++.|+.+....
T Consensus 261 ---~~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 261 ---PRNLN----PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ---CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ---CccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11111 23778999999999999999999999999887543
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.4e-38 Score=343.03 Aligned_cols=253 Identities=19% Similarity=0.394 Sum_probs=192.5
Q ss_pred hcCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCC-hhhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. .....+.+.+|+++++++ +|||||+++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467888999999999999999852 3567999999764 334567899999999999 899999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
+ ..++||||+++|+|.+++..... ...+++..+..++.||+.||+|||+. +|+|||
T Consensus 160 ~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrD 228 (370)
T 2psq_A 160 G--------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRD 228 (370)
T ss_dssp S--------SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred C--------CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 3 68999999999999999976532 23478999999999999999999997 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCcccccccccc--cCCC------CC--CcccCCCCCCCEeehhHHHHHHhc-CCCcccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVSEDINSVG--GKQE------DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAAR 687 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~--~~~~------~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~ 687 (766)
|||+|||++.++.+||+|||+++......... .... .| .....++.++|||||||++|||+| |+.||..
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~ 308 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999997543321110 0000 01 111335567899999999999999 9999864
Q ss_pred CccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 688 KGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
...... ...+. ...... .....+ ..+.+++.+||+.||.+||++.||++.|+.+.+..
T Consensus 309 ~~~~~~--~~~~~-~~~~~~-----~~~~~~----~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 309 IPVEEL--FKLLK-EGHRMD-----KPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp CCGGGH--HHHHH-TTCCCC-----CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHH--HHHHh-cCCCCC-----CCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 332211 11111 111111 111111 24778999999999999999999999999987644
No 27
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=338.89 Aligned_cols=250 Identities=18% Similarity=0.299 Sum_probs=191.1
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
++|.+.+.||+|+||+||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+.+ .
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--------~ 81 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK--------R 81 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT--------E
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC--------e
Confidence 56888899999999999999964 68999999997777777888999999999999999999999998763 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 82 LNFITEYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp EEEEEECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccce
Confidence 899999999999999998643 3489999999999999999999997 89999999999999999999999999996
Q ss_pred cccccccc-------------------c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhh
Q 004232 642 VSEDINSV-------------------G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSL 699 (766)
Q Consensus 642 ~~~~~~~~-------------------~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~ 699 (766)
........ + +..++......++.++|||||||++|||++|..|+...........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~--- 233 (310)
T 3s95_A 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG--- 233 (310)
T ss_dssp ECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS---
T ss_pred ecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh---
Confidence 54322110 0 0001111113456789999999999999999988753221100000
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.......++......+ ..+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 234 ---~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 234 ---LNVRGFLDRYCPPNCP----PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp ---BCHHHHHHHTCCTTCC----TTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---hhhhccccccCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0000001110001111 126789999999999999999999999998764
No 28
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4e-38 Score=344.29 Aligned_cols=248 Identities=24% Similarity=0.444 Sum_probs=183.4
Q ss_pred cCCCcCCceecCCceeEEEEEec----CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|+.. ++..||||+++.. .....+++.+|+.++++++||||++++|+|.+.+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK----- 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----
Confidence 57889999999999999999864 5778999999764 3445678999999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 120 ---~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 120 ---PVMIVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp ---SCEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred ---ceEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 6799999999999999997643 3589999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccccc-----C----CCCC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 638 GLSIVSEDINSVGG-----K----QEDP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 638 Gla~~~~~~~~~~~-----~----~~~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|+++.......... . ...| .....++.++|||||||++|||++ |+.|+..... ......+.. .
T Consensus 192 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i~~-~-- 266 (373)
T 2qol_A 192 GLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAVDE-G-- 266 (373)
T ss_dssp ----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHHHT-T--
T ss_pred ccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc-C--
Confidence 99976543211100 0 0001 111345667899999999999998 9999864322 111111111 1
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.....+ .. ....+.+++.+||+.||.+||+|.||+++|+.+..
T Consensus 267 ~~~~~~---~~----~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 267 YRLPPP---MD----CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp EECCCC---TT----CBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCC---cc----ccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 011011 11 12347789999999999999999999999998875
No 29
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.2e-38 Score=349.26 Aligned_cols=249 Identities=24% Similarity=0.438 Sum_probs=190.8
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|.+.+.||+|+||.||+|+.. +++.||||.++... ....+++.+|+++|++++|||||+++|+|.+.+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------- 185 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ------- 185 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS-------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC-------
Confidence 467888899999999999999975 78999999987542 334567889999999999999999999997653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 186 -~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 186 -PIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred -CcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 5799999999999999997543 2488999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccccc--cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccc
Q 004232 640 SIVSEDINSVG--GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 640 a~~~~~~~~~~--~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
++......... .....+..| ..++.++|||||||++|||+| |+.|+........ ........ ..
T Consensus 260 s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~---~~~~~~~~--~~ 334 (377)
T 3cbl_A 260 SREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT---REFVEKGG--RL 334 (377)
T ss_dssp CEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH---HHHHHTTC--CC
T ss_pred ceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHcCC--CC
Confidence 97543221110 000001112 223457899999999999999 8999864332111 11111111 11
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..|. ..+ ..+.+++.+||+.||.+||||++|++.|+.+..
T Consensus 335 ~~~~---~~~----~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 PCPE---LCP----DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCT---TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC---CCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1111 111 246789999999999999999999999998864
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=337.23 Aligned_cols=251 Identities=24% Similarity=0.431 Sum_probs=190.4
Q ss_pred cCCCcCCceecCCceeEEEEEec----CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|+.. .+..||||+++.. .....+.+.+|+.++++++||||++++++|.+.+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 123 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR----- 123 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-----
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----
Confidence 56888899999999999999974 3456999999764 3445678999999999999999999999997653
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.++++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 124 ---~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 195 (325)
T 3kul_A 124 ---LAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDF 195 (325)
T ss_dssp ---CCEEEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred ---ccEEEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCC
Confidence 6799999999999999997543 3489999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc---cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 638 GLSIVSEDINSVG---GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 638 Gla~~~~~~~~~~---~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|+++......... .....+..+ ..++.++|||||||++|||++ |+.||..... ......+...
T Consensus 196 g~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~--- 270 (325)
T 3kul_A 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEEG--- 270 (325)
T ss_dssp SSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHHHTT---
T ss_pred CcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcC---
Confidence 9997653321110 000000011 234557899999999999999 9999864322 1112222111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
.....+ ...+ ..+.+++.+||+.||.+||++.||++.|+.+....+
T Consensus 271 ~~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 271 YRLPAP---MGCP----HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp CCCCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred CCCCCC---CCcC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 011111 1111 247789999999999999999999999999876443
No 31
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=9.6e-39 Score=337.77 Aligned_cols=253 Identities=22% Similarity=0.383 Sum_probs=189.1
Q ss_pred cCCCcCCceecCCceeEEEEEe-----cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||++++++|...+.
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 85 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 85 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC----
Confidence 5688899999999999999985 3688999999987777777889999999999999999999999876431
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 86 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 86 --RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp --TSCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCC
T ss_pred --CceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccC
Confidence 25799999999999999997653 2488999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc---ccCCC------CC--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHH----------
Q 004232 638 GLSIVSEDINSV---GGKQE------DP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEEL---------- 696 (766)
Q Consensus 638 Gla~~~~~~~~~---~~~~~------~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~---------- 696 (766)
|++......... ..... .| .....++.++|||||||++|||+||..|+...........
T Consensus 159 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238 (295)
T ss_dssp CSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHH
T ss_pred cccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhH
Confidence 999764322110 00000 11 1113456688999999999999999888753211111100
Q ss_pred ---hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 697 ---DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 697 ---~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
........ ....+ .. ....+.+++.+||+.||.+|||+.||+++|+.+..
T Consensus 239 ~~~~~~~~~~~--~~~~~---~~----~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 239 FHLIELLKNNG--RLPRP---DG----CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HHHHHHHHTTC--CCCCC---TT----CCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccC--cCCCC---cC----cCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 00000000 00001 11 12347789999999999999999999999998763
No 32
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.4e-37 Score=331.30 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=193.3
Q ss_pred ccCHHHHHHHhcC----------CCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCC
Q 004232 472 SFTLEELKEATNN----------FDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH 540 (766)
Q Consensus 472 ~~~~~~l~~~~~~----------f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpn 540 (766)
.++.++++.+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4678888887764 666778999999999999975 79999999997665556678999999999999999
Q ss_pred cccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCC
Q 004232 541 LVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVK 620 (766)
Q Consensus 541 iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk 620 (766)
|++++++|...+ ..++||||+++|+|.+++.+. .+++..+..++.+++.||+|||+. +|+|||||
T Consensus 104 iv~~~~~~~~~~--------~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlk 168 (321)
T 2c30_A 104 VVEMYKSYLVGE--------ELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIK 168 (321)
T ss_dssp BCCEEEEEEETT--------EEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCS
T ss_pred cceEEEEEEECC--------EEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCC
Confidence 999999998763 689999999999999988643 389999999999999999999997 89999999
Q ss_pred CCceEEcCCCcEEEecCCCCcccccccccc----cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch
Q 004232 621 TNNILLNEHRIAKLSDYGLSIVSEDINSVG----GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL 692 (766)
Q Consensus 621 ~~NILld~~~~~kl~DFGla~~~~~~~~~~----~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~ 692 (766)
|+||+++.++.+||+|||++.......... ++ .++......++.++|||||||++|||+||+.|+......
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~- 247 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV- 247 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 999999999999999999986543321110 00 011111233566889999999999999999998643321
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+... ....+..+. ..+ ..+.+++.+||+.||.+|||+.||++.
T Consensus 248 -~~~~~~~~~-~~~~~~~~~---~~~----~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 248 -QAMKRLRDS-PPPKLKNSH---KVS----PVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp -HHHHHHHHS-SCCCCTTGG---GSC----HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -HHHHHHhcC-CCCCcCccc---cCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111 111111110 111 236788999999999999999999864
No 33
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2e-37 Score=328.19 Aligned_cols=243 Identities=20% Similarity=0.342 Sum_probs=187.3
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||+||+|+. .+|+.||||++........+.+.+|+.++++++||||+++++++.+.+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------- 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-------- 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT--------
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC--------
Confidence 46799999999999999999984 579999999987655555678899999999999999999999998764
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+. .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 91 ELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 789999999999999999764 378999999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccccc----C----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 641 IVSEDINSVGG----K----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 641 ~~~~~~~~~~~----~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........... + .++......++.++|||||||++|||+||+.||...... .....+.... ......+.
T Consensus 164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~-~~~~~~~~ 240 (297)
T 3fxz_A 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLIATNG-TPELQNPE 240 (297)
T ss_dssp EECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHHC-SCCCSCGG
T ss_pred eecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCC-CCCCCCcc
Confidence 65433211111 0 011111234567899999999999999999998643321 1111111111 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ...+.+++.+||+.||.+|||++|+++.
T Consensus 241 ---~~----~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 241 ---KL----SAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ---GS----CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cc----CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11 1236789999999999999999999763
No 34
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.8e-37 Score=332.52 Aligned_cols=262 Identities=17% Similarity=0.309 Sum_probs=190.5
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||+||+|+.. ++.||||+++.... ....+++|+.++++++|||||++++++.+.... ...
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~----~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV----DVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS----SEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCC----Cce
Confidence 467889999999999999999875 78999999965433 344566799999999999999999999875421 135
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCCCcccCCCCCCceEEcCCCcEEE
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG-------VIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
+++||||+++|+|.+++++. .++|..+..++.|++.||+|||+. +.++|+||||||+|||++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 79999999999999999764 389999999999999999999985 1237999999999999999999999
Q ss_pred ecCCCCcccccccccccC--CCCCCccc-------------CCCCCCCEeehhHHHHHHhcCCCccccCccc--------
Q 004232 635 SDYGLSIVSEDINSVGGK--QEDPNSWE-------------MTKLEDDVFSFGFMLLESVAGPSVAARKGQF-------- 691 (766)
Q Consensus 635 ~DFGla~~~~~~~~~~~~--~~~~~~~~-------------~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-------- 691 (766)
+|||+++........... ......|. .++.++|||||||++|||+||+.||......
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999654332211000 00001111 1223569999999999999999998642110
Q ss_pred -----hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 692 -----LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 692 -----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
....+................. ........+.+++.+||+.||.+|||+.||++.|+.+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 0011111111111111111100 1123445688999999999999999999999999998754
No 35
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.4e-37 Score=331.95 Aligned_cols=241 Identities=20% Similarity=0.306 Sum_probs=185.6
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|++++||||+++++++.+.+
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~------ 87 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK------ 87 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 46799999999999999999986 57999999998654 3345677889999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 88 --~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 88 --TLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp --EEEEEECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred --EEEEEEECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeecc
Confidence 7899999999999999997653 388999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccccCCCC-----CC--cccC-CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSVGGKQED-----PN--SWEM-TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~~~~~~~-----~~--~~~~-~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
++............... |. .... .+.++|||||||++|||+||+.||..... ......+.... ..+
T Consensus 160 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~--~~~-- 233 (328)
T 3fe3_A 160 FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGK--YRI-- 233 (328)
T ss_dssp CCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CCC--
T ss_pred CceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--CCC--
Confidence 99654332211111111 11 0111 23578999999999999999999974332 22122221111 111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
|. ..+ ..+.+++.+|++.||.+|||++|+++.
T Consensus 234 p~---~~s----~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 234 PF---YMS----TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp CT---TSC----HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred CC---CCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11 111 236789999999999999999999764
No 36
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-37 Score=324.05 Aligned_cols=247 Identities=23% Similarity=0.422 Sum_probs=191.2
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|+..++..||||++..... ..+++.+|++++++++||||+++++++.+.+ ..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~ 80 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--------PI 80 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--------SE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--------ce
Confidence 56888899999999999999988889999999976432 3467899999999999999999999998753 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp EEEEECCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEEeCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccc
Confidence 99999999999999997543 3488999999999999999999997 899999999999999999999999999975
Q ss_pred cccccccc--c-------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSVG--G-------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~~--~-------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........ . ..++......++.++|||||||++|||+| |+.|+...... .....+... .....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~---~~~~~~~ 230 (269)
T 4hcu_A 156 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTG---FRLYKPR 230 (269)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTT---CCCCCCT
T ss_pred ccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcC---ccCCCCC
Confidence 43321110 0 00110111345668899999999999999 89998643321 112222111 1111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..+ ..+.+++.+||+.||.+||++.|+++.|+++.+
T Consensus 231 ---~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 231 ---LAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp ---TSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---cCC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 111 236789999999999999999999999999864
No 37
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=2.6e-37 Score=346.59 Aligned_cols=249 Identities=22% Similarity=0.405 Sum_probs=190.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|++. |+.||||+++... ..+.|.+|+.+|++++|||||+++|+|.+.. ..
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------~~ 261 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-------GG 261 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT-------SC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC-------Cc
Confidence 456888899999999999999875 7899999997654 4577999999999999999999999988753 25
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++++.. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 899999999999999998653 23478999999999999999999997 89999999999999999999999999997
Q ss_pred ccccccccccCC---CCC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 642 VSEDINSVGGKQ---EDP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 642 ~~~~~~~~~~~~---~~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
............ ..| .....++.++|||||||++|||+| |+.|+........ ...+. .+. +...| .
T Consensus 338 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i~-~~~--~~~~p---~ 409 (450)
T 1k9a_A 338 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVE-KGY--KMDAP---D 409 (450)
T ss_dssp ECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHHHH-TTC--CCCCC---T
T ss_pred cccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHH-cCC--CCCCC---C
Confidence 543221111100 011 112345668999999999999999 9999874332111 11111 111 11111 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
.. ...+.+++.+||+.||.+||||.||++.|+.+...
T Consensus 410 ~~----~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 410 GC----PPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11 23477899999999999999999999999988653
No 38
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-37 Score=364.80 Aligned_cols=312 Identities=19% Similarity=0.293 Sum_probs=235.0
Q ss_pred ChHHHHHHHHHHHcCCCCC---------CCCCccCCCCCCCCCCCCCccceEec-CCCEEEEEeCCCCCCCCCCCCcccc
Q 004232 27 QSSQTQVLLQLRKHLEYPK---------QLEIWINHGADFCYISSSTQVNITCQ-DNFITELKIIGDKPSNVGNFDGFAS 96 (766)
Q Consensus 27 ~~~~~~aLl~~k~~~~~~~---------~l~~W~~~~~~~C~~~~~~~~gv~C~-~~~v~~l~l~~~~~~~~~~~~~~~~ 96 (766)
...|++||.+|+.++..+. ...+|+.+ .+||.|. .+.||+|+ .++|++|++.+..+.
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~---------- 94 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWG--AQPGVSLNSNGRVTGLSLEGFGAS---------- 94 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTT--CCTTEEECTTCCEEEEECTTSCCE----------
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCccccc--CCCCeEEcCCCCEEEEEecCcccC----------
Confidence 3479999999999986542 24579865 7999983 24579995 479999998765432
Q ss_pred ccccCCCcccCCcccccccCCCCCCEEecccc------------------------------------------------
Q 004232 97 ANASLSENFSIDSFVTTLARLTSLRVLSLVSL------------------------------------------------ 128 (766)
Q Consensus 97 ~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n------------------------------------------------ 128 (766)
+.+|+++++|++|++|+|++|
T Consensus 95 -----------g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~ 163 (636)
T 4eco_A 95 -----------GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIK 163 (636)
T ss_dssp -----------EEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHH
T ss_pred -----------CcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHH
Confidence 345667778888888888777
Q ss_pred ------------------------------cccccCCccccCCCCCCEEecccccCccC-----------------CCcc
Q 004232 129 ------------------------------GIWGSLPDKIHRLYSLEYLDLSSNFLFGS-----------------VPPK 161 (766)
Q Consensus 129 ------------------------------~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~-----------------~p~~ 161 (766)
+++| +|+.|+++++|++|+|++|.++|. +|+.
T Consensus 164 ~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~ 242 (636)
T 4eco_A 164 DCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTED 242 (636)
T ss_dssp HHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC
T ss_pred HHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchh
Confidence 3445 777788888888888888888775 7888
Q ss_pred CC--CCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCcc-CCC-CCCccccCC------CCCCEEEccCCccCCCCC
Q 004232 162 IS--TMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNK-LAG-PFPSSIQRI------STLSDLDLSKNAISGSLP 231 (766)
Q Consensus 162 ~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p 231 (766)
++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|
T Consensus 243 l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip 321 (636)
T 4eco_A 243 LKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFP 321 (636)
T ss_dssp CCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCC
T ss_pred hhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccC
Confidence 77 88888888888888888888888888888888888887 777 778777766 78888888888888 455
Q ss_pred C---CCCCCCCCEEECCCCCCCCCCCCCC--CCCcEEEccCCcCccCCcccccCCCC-CCEEEccCCcCCCCCccccCCC
Q 004232 232 D---LSSLGSLNVLNLSDNKLDSNLPKLP--RGLVMAFLSNNSFSGEIPKQYGQLNQ-LQQLDMSFNALRGMPPPAIFSL 305 (766)
Q Consensus 232 ~---~~~l~~L~~L~ls~N~l~~~~p~~~--~~l~~l~ls~N~l~~~~p~~~~~l~~-L~~L~ls~N~l~~~~~~~~~~l 305 (766)
. ++.+++|++|++++|+++|.+|.+. .+|+.|++++|+++ .+|..++.+++ |+.|++++|+++. +|..+..+
T Consensus 322 ~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~-lp~~~~~~ 399 (636)
T 4eco_A 322 VETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKY-IPNIFDAK 399 (636)
T ss_dssp CHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSS-CCSCCCTT
T ss_pred chhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcc-cchhhhhc
Confidence 4 7788888888888888887777332 46777888888887 67777888887 8888888888884 44455554
Q ss_pred C--CCCeEEeecCcCcccCCccCC-------CCCCccEEeCcCCccccCCCCC-CCCCCCCceeecCCCcCC
Q 004232 306 P--NISDLNLASNKFSGSLPKNLN-------CGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 306 ~--~L~~L~L~~N~l~g~~p~~~~-------~~~~L~~L~ls~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~ 367 (766)
+ +|+.|+|++|++++.+|..+. .+.+|+.|++++|+++ .+|.. +..+++|+.|++++|.++
T Consensus 400 ~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 400 SVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp CSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS
T ss_pred ccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC
Confidence 4 788888888888887777777 6677888888888887 44543 345677888888888776
No 39
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.9e-37 Score=326.20 Aligned_cols=267 Identities=18% Similarity=0.224 Sum_probs=196.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.|.+.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+... .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~ 82 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT------R 82 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT------C
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCC------c
Confidence 56888999999999999999965 58999999997543 2345778899999999999999999999886542 2
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE----cCCCcEEEec
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHRIAKLSD 636 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~D 636 (766)
..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 6799999999999999998654444589999999999999999999997 89999999999999 7788899999
Q ss_pred CCCCccccccccccc---CC--CCCCc----------ccCCCCCCCEeehhHHHHHHhcCCCccccCc--cchHHHHhhh
Q 004232 637 YGLSIVSEDINSVGG---KQ--EDPNS----------WEMTKLEDDVFSFGFMLLESVAGPSVAARKG--QFLQEELDSL 699 (766)
Q Consensus 637 FGla~~~~~~~~~~~---~~--~~~~~----------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~--~~~~~~~~~~ 699 (766)
||+++.......... +. ..|.. ...++.++|||||||++|||+||+.||.... ......+..+
T Consensus 160 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp CTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred CCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 999976543221111 10 01110 2345678999999999999999999986322 1112222221
Q ss_pred hcccC---ccccc---------ccc--ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 700 NSQEG---RQRLV---------DPV--VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 700 ~~~~~---~~~~~---------d~~--~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
..... ...+. .+. ............+.+++.+|++.||++|||++|+++..++.+...+
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~ 312 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGN 312 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC---
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCC
Confidence 11110 00000 000 0112234455668899999999999999999999999888654433
No 40
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.2e-38 Score=340.66 Aligned_cols=263 Identities=22% Similarity=0.348 Sum_probs=196.9
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccc
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCL 544 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l 544 (766)
+...++....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34455666778899999999999999999973 346889999997643 34457899999999999 79999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC-----------------------------------------
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP----------------------------------------- 583 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----------------------------------------- 583 (766)
+|+|.+.+ ...++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~-------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (359)
T 3vhe_A 92 LGACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSAS 164 (359)
T ss_dssp EEEECSTT-------SCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------
T ss_pred eeeeecCC-------CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccc
Confidence 99998754 247999999999999999976432
Q ss_pred ----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 584 ----------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 584 ----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~ 241 (359)
T 3vhe_A 165 SGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 241 (359)
T ss_dssp -------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGS
T ss_pred cccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEecccee
Confidence 11288999999999999999999997 89999999999999999999999999996
Q ss_pred cccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccc
Q 004232 642 VSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 642 ~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
........ . +..++......++.++|||||||++|||+| |+.||....... ..............
T Consensus 242 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~~~-- 317 (359)
T 3vhe_A 242 DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--EFCRRLKEGTRMRA-- 317 (359)
T ss_dssp CTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--HHHHHHHHTCCCCC--
T ss_pred eecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH--HHHHHHHcCCCCCC--
Confidence 54221110 0 000110112345668899999999999999 999986432211 11111111111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
+ ...+ ..+.+++.+||+.||.+|||+.||+++|+.+.+.
T Consensus 318 ~---~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 318 P---DYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C---CCCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1 1111 2377889999999999999999999999988753
No 41
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5e-38 Score=352.87 Aligned_cols=252 Identities=20% Similarity=0.379 Sum_probs=193.4
Q ss_pred HHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 478 LKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 478 l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
+....++|++.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+.+|++++|||||++++++.+.
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~------ 255 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE------ 255 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC------
Confidence 334456788899999999999999999888999999997643 3467899999999999999999999998632
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.++++... ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 256 ---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DF 328 (454)
T 1qcf_A 256 ---PIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 328 (454)
T ss_dssp ---SCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECST
T ss_pred ---ccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeC
Confidence 5799999999999999997532 12478899999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc-cCCCCCC--------cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccc
Q 004232 638 GLSIVSEDINSVG-GKQEDPN--------SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 638 Gla~~~~~~~~~~-~~~~~~~--------~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|+++......... .....+. ....++.++|||||||++|||+| |+.||..... .+....+.. . ..
T Consensus 329 G~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~-~--~~ 403 (454)
T 1qcf_A 329 GLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALER-G--YR 403 (454)
T ss_dssp TGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHH-T--CC
T ss_pred CCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc-C--CC
Confidence 9997654321110 0000111 11345668899999999999999 9999864322 111111111 1 11
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
...|. .. ...+.+++.+||+.||.+||||++|++.|+.+..
T Consensus 404 ~~~~~---~~----~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 404 MPRPE---NC----PEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCCCT---TS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCC---CC----CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 11111 11 2347789999999999999999999999998754
No 42
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=326.73 Aligned_cols=250 Identities=20% Similarity=0.336 Sum_probs=185.4
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|+.. ++.||||++... ...+.+.+|++++++++||||++++|++.+ ..
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------~~ 74 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN----------PV 74 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT----------TT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----------Cc
Confidence 46788899999999999999875 788999998654 345788999999999999999999998864 35
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc-EEEecCCCCc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-AKLSDYGLSI 641 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-~kl~DFGla~ 641 (766)
++||||+++|+|.+++........+++..++.++.++++||+|||+.+..+|+||||||+||+++.++. +||+|||++.
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154 (307)
T ss_dssp EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence 899999999999999986554345788999999999999999999943338999999999999998876 8999999986
Q ss_pred cccccccc--cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 642 VSEDINSV--GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 642 ~~~~~~~~--~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
........ +. ..++......++.++|||||||++|||+||+.|+................ ..... ....
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~-----~~~~ 228 (307)
T 2eva_A 155 DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN-GTRPP-----LIKN 228 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT-TCCCC-----CBTT
T ss_pred ccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc-CCCCC-----cccc
Confidence 54321111 11 11111112345678999999999999999999987433222221111111 11111 1111
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 717 SSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.+ ..+.+++.+||+.||.+|||++||++.|+.+.+
T Consensus 229 ~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 229 LP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 12 236789999999999999999999999998875
No 43
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.9e-37 Score=367.86 Aligned_cols=330 Identities=18% Similarity=0.227 Sum_probs=171.7
Q ss_pred CCChHHHHHHHHHHHcCCCCCCCCCccCCC----CCC--CCCC-------CCCccceEec-CCCEEEEEeCCCCCCCC--
Q 004232 25 QLQSSQTQVLLQLRKHLEYPKQLEIWINHG----ADF--CYIS-------SSTQVNITCQ-DNFITELKIIGDKPSNV-- 88 (766)
Q Consensus 25 ~~~~~~~~aLl~~k~~~~~~~~l~~W~~~~----~~~--C~~~-------~~~~~gv~C~-~~~v~~l~l~~~~~~~~-- 88 (766)
++...|++||++||+++.+| +|+.++ .+| |.|. +....||+|+ .++|++|++.+..+.|.
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip 340 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVP 340 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEEC
T ss_pred ccchHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCc
Confidence 34468999999999999887 797653 367 9981 1112689997 58999999987654431
Q ss_pred ---CCCCccccccccC-CCc------------------------------------------------------------
Q 004232 89 ---GNFDGFASANASL-SEN------------------------------------------------------------ 104 (766)
Q Consensus 89 ---~~~~~~~~~~~~l-~~n------------------------------------------------------------ 104 (766)
+++..+..+ ++ +.|
T Consensus 341 ~~l~~L~~L~~L--dLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 341 DAIGQLTELKVL--SFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp GGGGGCTTCCEE--ESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred hHHhccccceEe--eecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 111111110 11 111
Q ss_pred -----------------ccCCcccccccCCCCCCEEecccccccc-----------------cCCcccc--CCCCCCEEe
Q 004232 105 -----------------FSIDSFVTTLARLTSLRVLSLVSLGIWG-----------------SLPDKIH--RLYSLEYLD 148 (766)
Q Consensus 105 -----------------~~~~~~~~~l~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~L~~L~~L~ 148 (766)
...+ +|..+++|++|++|+|++|.|+| .+|+.++ ++++|++|+
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 0001 45555555555555555555555 2555544 555555555
Q ss_pred cccccCccCCCccCCCCCCCCEEEccCCc-CCC-CCCcccCCCC-------CCCEEEccCccCCCCCCc--cccCCCCCC
Q 004232 149 LSSNFLFGSVPPKISTMVKLQTLILDDNF-FNN-TIPNWFDSLP-------SLTFLSMRNNKLAGPFPS--SIQRISTLS 217 (766)
Q Consensus 149 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l~~L~ 217 (766)
|++|++.+.+|..|++|++|++|+|++|+ +++ .+|..+++++ +|++|+|++|+++ .+|. .++++++|+
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 55555555555555555555555555554 554 4454333332 5555555555555 4555 555555555
Q ss_pred EEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CC--CC-CcEEEccCCcCccCCcccccCCCC--CCEEEccC
Q 004232 218 DLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPK-LP--RG-LVMAFLSNNSFSGEIPKQYGQLNQ--LQQLDMSF 291 (766)
Q Consensus 218 ~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~-~~--~~-l~~l~ls~N~l~~~~p~~~~~l~~--L~~L~ls~ 291 (766)
.|+|++|.++ .+|.++.+++|+.|+|++|+++ .+|. +. .. |+.|+|++|+++ .+|..++.++. |+.|+|++
T Consensus 577 ~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 577 LLDCVHNKVR-HLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EEECTTSCCC-BCCCCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCS
T ss_pred EEECCCCCcc-cchhhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcC
Confidence 5555555555 4445555555555555555555 3332 11 22 555555555555 44554444432 55555555
Q ss_pred CcCCCCCcccc---C--CCCCCCeEEeecCcCcccCCccC-CCCCCccEEeCcCCccccCCCCCCCCC--------CCCc
Q 004232 292 NALRGMPPPAI---F--SLPNISDLNLASNKFSGSLPKNL-NCGGKLVFFDISNNKLTGGLPSCLSNE--------SDKR 357 (766)
Q Consensus 292 N~l~~~~~~~~---~--~l~~L~~L~L~~N~l~g~~p~~~-~~~~~L~~L~ls~N~l~g~~p~~~~~~--------~~l~ 357 (766)
|++++.+|... . .+++|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+++ .+|..+... ++|+
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~ 731 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLT 731 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCC
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCcc
Confidence 55555443211 1 2234555555555555 344332 24455555555555555 344333221 1455
Q ss_pred eeecCCCcCC
Q 004232 358 VVKFRGNCLS 367 (766)
Q Consensus 358 ~l~l~~N~l~ 367 (766)
.|++++|.++
T Consensus 732 ~L~Ls~N~L~ 741 (876)
T 4ecn_A 732 TIDLRFNKLT 741 (876)
T ss_dssp EEECCSSCCC
T ss_pred EEECCCCCCc
Confidence 5555555554
No 44
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=7e-37 Score=324.18 Aligned_cols=253 Identities=17% Similarity=0.310 Sum_probs=182.6
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHh--CCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~--l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||+||+|+. +|+.||||++... ..+.+.+|.+++.. ++||||+++++++.+... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~----~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRH----SS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET----TE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC----CC
Confidence 46788999999999999999987 6899999998653 23455566666666 799999999999876421 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCceEEcCCCc
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLH--------TGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
...++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 3589999999999999999643 4899999999999999999999 54 8999999999999999999
Q ss_pred EEEecCCCCccccccccc---------ccCC-CCCCccc--------CCCCCCCEeehhHHHHHHhcC----------CC
Q 004232 632 AKLSDYGLSIVSEDINSV---------GGKQ-EDPNSWE--------MTKLEDDVFSFGFMLLESVAG----------PS 683 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~---------~~~~-~~~~~~~--------~~~~~~DV~SfGvil~ElltG----------~~ 683 (766)
+||+|||+++........ ++.. ..|.... .++.++|||||||++|||+|| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999654322111 0000 0111000 112468999999999999999 77
Q ss_pred ccccCc--cchHHHHhhhhccc-CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 004232 684 VAARKG--QFLQEELDSLNSQE-GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYA 753 (766)
Q Consensus 684 p~~~~~--~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~ 753 (766)
||.... .............. ....+... .........+.+++.+||+.||.+|||+.||++.|+++
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR----WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChh----hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 764321 11111112111111 11111110 11223456688999999999999999999999999875
No 45
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-37 Score=332.56 Aligned_cols=247 Identities=21% Similarity=0.335 Sum_probs=183.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCc----eEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGT----SVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|++.+.||+|+||.||+|+.. +++ .||+|.+.... ....+++.+|+.++++++||||++++++|.+.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 56888899999999999999853 444 36888885432 34467899999999999999999999999874
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++|+||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 90 ----~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 90 ----TVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ----SEEEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred ----CeEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEcc
Confidence 4689999999999999998653 3489999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccccc--CCC------CC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSVGG--KQE------DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~~~--~~~------~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++.......... ... .| .....++.++|||||||++|||+| |+.||............ ....
T Consensus 161 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~---~~~~- 236 (327)
T 3poz_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL---EKGE- 236 (327)
T ss_dssp TTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH---HTTC-
T ss_pred CcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH---HcCC-
Confidence 999976432211100 000 01 111345668899999999999999 99998754332221111 1111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
....+. . ....+.+++.+||+.||.+||+|.||+++|+.+..
T Consensus 237 -~~~~~~---~----~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 237 -RLPQPP---I----CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCCCT---T----BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCCCc---c----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 111111 1 11247789999999999999999999999998764
No 46
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=333.12 Aligned_cols=253 Identities=21% Similarity=0.403 Sum_probs=192.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec--------CCceEEEEEccCC-hhhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE--------NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
.++|.+.+.||+|+||.||+|+.. .+..||||+++.. .....+++.+|+++++++ +|||||+++++|.+.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467888999999999999999852 3457999999764 344567899999999999 999999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
+ ..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+|||
T Consensus 148 ~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 216 (382)
T 3tt0_A 148 G--------PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRD 216 (382)
T ss_dssp S--------SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred C--------ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 3 57999999999999999976532 23589999999999999999999997 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCcccccccccc--cCC------CCC--CcccCCCCCCCEeehhHHHHHHhc-CCCcccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVSEDINSVG--GKQ------EDP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAAR 687 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~--~~~------~~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~ 687 (766)
|||+|||++.++.+||+|||+++......... ... ..| .....++.++|||||||++|||+| |..|+..
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~ 296 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999997543321110 000 011 111334567899999999999999 9999864
Q ss_pred CccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 688 KGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
... ......+.. ...... + ...+ ..+.+++.+||+.||.+|||++||++.|+.+....
T Consensus 297 ~~~--~~~~~~~~~-~~~~~~--~---~~~~----~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 297 VPV--EELFKLLKE-GHRMDK--P---SNCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp CCH--HHHHHHHHT-TCCCCC--C---SSCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred CCH--HHHHHHHHc-CCCCCC--C---ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 322 111111111 111111 1 1112 23778999999999999999999999999987644
No 47
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.2e-37 Score=325.21 Aligned_cols=248 Identities=22% Similarity=0.378 Sum_probs=188.4
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|+..++..||||+++.... ..+++.+|++++++++||||+++++++.+.. .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~ 93 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR--------P 93 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--------S
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC--------C
Confidence 457888999999999999999998888999999976432 3467899999999999999999999997653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred eEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccc
Confidence 899999999999999997632 2488999999999999999999997 89999999999999999999999999997
Q ss_pred ccccccccc--c-------CCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSVG--G-------KQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~~--~-------~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
......... . ..++......++.++|||||||++|||+| |+.||...... .....+.. . .....+
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~-~--~~~~~~ 243 (283)
T 3gen_A 169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQ-G--LRLYRP 243 (283)
T ss_dssp GBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHT-T--CCCCCC
T ss_pred cccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhc-c--cCCCCC
Confidence 543321110 0 00100111345567899999999999999 99998643321 11111111 1 011111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
. ..+ ..+.+++.+||+.||.+|||++|+++.|+++..
T Consensus 244 ~---~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 244 H---LAS----EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp T---TCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C---cCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 1 111 237789999999999999999999999998764
No 48
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=338.41 Aligned_cols=253 Identities=23% Similarity=0.391 Sum_probs=189.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.++|++.+.||+|+||+||+|++. ++..||||+++.. ......++.+|+.++++++|||||++++++.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-- 147 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 147 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--
Confidence 356888999999999999999843 4678999999754 3445567899999999999999999999998753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
..++||||+++|+|.+++..... ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++
T Consensus 148 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 148 ------PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp ------SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred ------CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCC
Confidence 57999999999999999976431 23488999999999999999999997 899999999999999554
Q ss_pred ---cEEEecCCCCcccccccc--cc--------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 631 ---IAKLSDYGLSIVSEDINS--VG--------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 631 ---~~kl~DFGla~~~~~~~~--~~--------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
.+||+|||+++....... .. +..++......++.++|||||||++|||+| |..||...... ...
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~ 296 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL 296 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH
T ss_pred CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHH
Confidence 599999999864322110 00 000110112345668899999999999998 99998643321 111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
..+.. ...... + ...+ ..+.+++.+||+.||.+||++.||++.|+.+.+..
T Consensus 297 ~~i~~-~~~~~~--~---~~~~----~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 297 EFVTS-GGRMDP--P---KNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHHHT-TCCCCC--C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHHc-CCCCCC--C---ccCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 11111 111110 1 1111 23778999999999999999999999999887633
No 49
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.2e-36 Score=323.74 Aligned_cols=251 Identities=19% Similarity=0.342 Sum_probs=185.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|.+.+.||+|+||.||+|+.. ..+|||.++.. .....+.+.+|++++++++||||+++++++...
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 104 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD-------- 104 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC--------
Confidence 357888999999999999999864 35899988753 334567899999999999999999999987643
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 105 -~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~ 178 (307)
T 3lb7_A 105 -NLAIVTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp -SCEEEEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCS
T ss_pred -cEEEEEecCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCC
Confidence 4799999999999999997543 3589999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc------ccCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 640 SIVSEDINSV------GGKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 640 a~~~~~~~~~------~~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
+......... .++. ..|.. ...++.++|||||||++|||+||+.||....... ............
T Consensus 179 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~~~ 256 (307)
T 3lb7_A 179 ATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--QIIFMVGRGYAS 256 (307)
T ss_dssp SCC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--HHHHHHHHTCCC
T ss_pred ceecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--HHHHHHhcCCCC
Confidence 9654321100 0010 01110 1234557899999999999999999997433211 111111111010
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
... +......+ ..+.+++.+||+.||.+||++.||++.|+.+.+
T Consensus 257 ~~~-~~~~~~~~----~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 257 PDL-SKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCS-TTSCSSSC----HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred cch-hhhhcCCc----HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 000 00111112 347789999999999999999999999998764
No 50
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-37 Score=332.38 Aligned_cols=253 Identities=23% Similarity=0.354 Sum_probs=192.8
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~ 552 (766)
...++|++.+.||+|+||.||+|+.. +++.||||.++... ....+.+.+|+.++++++||||++++++|.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678999999999999999999864 35889999997643 344678999999999999999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTP---------------------GKVLNWSERLAVLIGVAKAVQFLHTGVI 611 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~ 611 (766)
..++||||+++|+|.+++.+... ...+++.+++.++.||+.||+|||+.
T Consensus 124 --------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-- 193 (343)
T 1luf_A 124 --------PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-- 193 (343)
T ss_dssp --------SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred --------ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence 67999999999999999976421 14589999999999999999999997
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCcccccccccc----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVG----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA- 680 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt- 680 (766)
+|+||||||+||+++.++.+||+|||+++......... +..++......++.++|||||||++|||+|
T Consensus 194 -~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 272 (343)
T 1luf_A 194 -KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 272 (343)
T ss_dssp -TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred -CeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhc
Confidence 89999999999999999999999999986543221100 000000111345668899999999999999
Q ss_pred CCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 681 GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 681 G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
|+.|+..... ......+. ....... ....+ ..+.+++.+||+.||.+||++.||++.|+.+.+
T Consensus 273 g~~p~~~~~~--~~~~~~~~-~~~~~~~-----~~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 273 GLQPYYGMAH--EEVIYYVR-DGNILAC-----PENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp TCCTTTTSCH--HHHHHHHH-TTCCCCC-----CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCCcCCCCCh--HHHHHHHh-CCCcCCC-----CCCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 9989864322 11111111 1111111 11111 247789999999999999999999999998764
No 51
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.2e-37 Score=322.44 Aligned_cols=247 Identities=21% Similarity=0.357 Sum_probs=190.1
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|+..++..||||.++.... ..+++.+|++++++++||||+++++++.+.+ .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY--------P 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------S
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--------c
Confidence 356888999999999999999998888999999976432 3467899999999999999999999997653 6
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 78 IYIVTEYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp EEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred eEEEEEccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccce
Confidence 899999999999999997642 3488999999999999999999997 89999999999999999999999999986
Q ss_pred cccccccccc--CCC-----CC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSVGG--KQE-----DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~~~--~~~-----~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
.......... ... .| .....++.++|||||||++|||+| |+.|+...... .....+... .....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~---~~~~~~ 227 (268)
T 3sxs_A 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQG---HRLYRP 227 (268)
T ss_dssp ECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTT---CCCCCC
T ss_pred ecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHHHcC---CCCCCC
Confidence 5433211111 000 01 011234568999999999999999 99998643321 111111111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.. .+ ..+.+++.+||+.||.+|||+.||++.|+.+.
T Consensus 228 ~~---~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 228 HL---AS----DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp TT---SC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred Cc---Ch----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11 11 23678999999999999999999999998764
No 52
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=332.33 Aligned_cols=241 Identities=21% Similarity=0.324 Sum_probs=181.9
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~------- 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN------- 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-------
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-------
Confidence 46789999999999999999985 579999999986543 233457889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+|||+
T Consensus 82 -~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~ 154 (347)
T 3zgw_A 82 -KIFMVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGL 154 (347)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred -EEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccC
Confidence 7899999999999999997653 388999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc-----ccCC--CCCC--ccc-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 640 SIVSEDINSV-----GGKQ--EDPN--SWE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 640 a~~~~~~~~~-----~~~~--~~~~--~~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
+......... .++. ..|. ... ..+.++|||||||++|||++|..||..... ......+.... ..+
T Consensus 155 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~--~~~- 229 (347)
T 3zgw_A 155 CAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--MALYKKIMRGK--YDV- 229 (347)
T ss_dssp CBC--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC--CCC-
T ss_pred cccccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCC--CCC-
Confidence 8654321110 0010 0111 111 236678999999999999999999974332 22222221111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
| ...+ ..+.+++.+||+.||.+|||++||++.
T Consensus 230 -p---~~~s----~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 -P---KWLS----PSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -C---CCCC----HHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1 1111 236689999999999999999999865
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.5e-37 Score=323.74 Aligned_cols=251 Identities=14% Similarity=0.223 Sum_probs=189.0
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+. .+++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~------ 84 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD------ 84 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS------
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC------
Confidence 5688899999999999999985 46899999998542 3345678999999999999999999999987653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 --~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 85 --CYYLVMEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp --EEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred --eEEEEEeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 7899999999999999997653 489999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc-----cCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 639 LSIVSEDINSVG-----GKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 639 la~~~~~~~~~~-----~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
+++......... ++. ++......++.++|||||||++|||+||+.||........ ...... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~-~~~~~~~ 233 (294)
T 4eqm_A 157 IAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQ-DSVPNVT 233 (294)
T ss_dssp SSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH--HHHHHS-SCCCCHH
T ss_pred CccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhh-ccCCCcc
Confidence 997543321110 010 1111123456789999999999999999999975432211 111111 1111110
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHHh
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRP-SFEDILWNLQYAAQ 755 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~~~~ 755 (766)
+......+ ..+.+++.+|++.||.+|| +++++.+.|+.+..
T Consensus 234 -~~~~~~~~----~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 234 -TDVRKDIP----QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp -HHSCTTSC----HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred -hhcccCCC----HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 01111111 2367889999999999999 99999999987654
No 54
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.5e-37 Score=331.34 Aligned_cols=260 Identities=18% Similarity=0.334 Sum_probs=181.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEecC-C---ceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLEN-G---TSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
..++|++.+.||+|+||.||+|+... + ..||||.++.. .....+.+.+|++++++++||||+++++++.+....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45679999999999999999998643 3 27999999754 334567899999999999999999999999875421
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP---GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
. .....++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 101 ~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 101 G--RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred c--CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 0 01234999999999999999864321 12488999999999999999999997 8999999999999999999
Q ss_pred EEEecCCCCccccccccc--ccCCCCCC--------cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhh
Q 004232 632 AKLSDYGLSIVSEDINSV--GGKQEDPN--------SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~--~~~~~~~~--------~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~ 700 (766)
+||+|||+++........ ......+. ....++.++|||||||++|||+| |+.|+........ ...+.
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~~ 253 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNYLI 253 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHH
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HHHHh
Confidence 999999999654322111 00000011 11335668899999999999999 8988864332211 11111
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
... ... .+ ...+ ..+.+++.+||+.||.+|||+.|+++.|+++....
T Consensus 254 ~~~-~~~--~~---~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 254 GGN-RLK--QP---PECM----EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp TTC-CCC--CC---TTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred cCC-CCC--CC---CccC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111 000 01 1111 34778999999999999999999999999988644
No 55
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-37 Score=352.69 Aligned_cols=249 Identities=23% Similarity=0.412 Sum_probs=191.3
Q ss_pred hcCCCcCCceecCCceeEEEEEecC-CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..+|++.+.||+|+||.||+|++.. +..||||.++.... ..++|.+|+.+|++++|||||+++|+|.+.+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-------- 289 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-------- 289 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCC--------
Confidence 4568888999999999999999764 88999999976432 4578999999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++|||||++|+|.+++++.. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred cEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 6799999999999999998643 24589999999999999999999997 8999999999999999999999999999
Q ss_pred cccccccccc-cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccc
Q 004232 641 IVSEDINSVG-GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 641 ~~~~~~~~~~-~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+......... .....+..| ..++.++|||||||++|||+| |+.|+......... ..+. ... ....
T Consensus 366 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~--~~~~-~~~--~~~~ 440 (495)
T 1opk_A 366 RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY--ELLE-KDY--RMER 440 (495)
T ss_dssp ECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH--HHHH-TTC--CCCC
T ss_pred eeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH--HHHH-cCC--CCCC
Confidence 7653321111 001111112 234557899999999999999 88888643322111 1111 111 1111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+ ... ...+.+|+.+||+.||.+||||.||+++|+.+.+
T Consensus 441 ~---~~~----~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 441 P---EGC----PEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp C---TTC----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred C---CCC----CHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1 111 1347789999999999999999999999987653
No 56
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.1e-37 Score=347.43 Aligned_cols=251 Identities=23% Similarity=0.390 Sum_probs=189.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..++|++.+.||+|+||.||+|+...+..||||+++... ...++|.+|+++|++++||||++++|+|.+.
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------- 251 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--------- 251 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---------
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCC---------
Confidence 456788889999999999999999888889999997643 2356799999999999999999999998652
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 327 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 327 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred ceEEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccc
Confidence 4799999999999999997532 23488999999999999999999997 8999999999999999999999999999
Q ss_pred cccccccccc-cCCCCCCc--------ccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccc
Q 004232 641 IVSEDINSVG-GKQEDPNS--------WEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 641 ~~~~~~~~~~-~~~~~~~~--------~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+......... .....+.. ...++.++|||||||++|||+| |+.|+..... .+....+.. .. ....
T Consensus 328 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~-~~--~~~~ 402 (452)
T 1fmk_A 328 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVER-GY--RMPC 402 (452)
T ss_dssp C--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHT-TC--CCCC
T ss_pred eecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc-CC--CCCC
Confidence 7653321110 00001111 1345668999999999999999 8999864322 121222211 11 1111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
| ... ...+.+++.+||+.||.+||||++|++.|+.+....
T Consensus 403 ~---~~~----~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 403 P---PEC----PESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp C---TTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred C---CCC----CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 1 111 234778999999999999999999999999876433
No 57
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.6e-36 Score=319.30 Aligned_cols=249 Identities=21% Similarity=0.375 Sum_probs=185.4
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhh-------hHHHHHHHHHHHHhCCCCCcccccceeecCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKY-------TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-------~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~ 553 (766)
.++|++.+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 35788899999999999999986 47899999998643221 126789999999999999999999998654
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc--
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-- 631 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-- 631 (766)
.++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+.. ++|+||||||+||+++.++.
T Consensus 96 --------~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~ 164 (287)
T 4f0f_A 96 --------PRMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENA 164 (287)
T ss_dssp --------TEEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTC
T ss_pred --------CeEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCC
Confidence 279999999999999886543 35899999999999999999999972 12999999999999987776
Q ss_pred ---EEEecCCCCccccccccc-ccCC--CCCCcc----cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc
Q 004232 632 ---AKLSDYGLSIVSEDINSV-GGKQ--EDPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS 701 (766)
Q Consensus 632 ---~kl~DFGla~~~~~~~~~-~~~~--~~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (766)
+||+|||+++........ .++. ..|... ..++.++|||||||++|||++|+.||.............+..
T Consensus 165 ~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 244 (287)
T 4f0f_A 165 PVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE 244 (287)
T ss_dssp SCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH
T ss_pred ceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc
Confidence 999999999654332111 1111 111111 123457899999999999999999987543332222222221
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
...... .....+ ..+.+++.+||+.||.+|||++||++.|++
T Consensus 245 ~~~~~~-----~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 245 EGLRPT-----IPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp SCCCCC-----CCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cCCCCC-----CCcccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111111 111111 347789999999999999999999999975
No 58
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.2e-37 Score=320.27 Aligned_cols=249 Identities=18% Similarity=0.322 Sum_probs=181.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+|+||.||+|+.. .+..||||.++... ....+.+.+|+.++++++||||+++++++.+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 88 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN----- 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC-----
Confidence 456888999999999999999864 25679999987543 34467799999999999999999999998542
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 89 ----~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 89 ----PVWIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp ----SCEEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred ----ccEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECc
Confidence 5799999999999999997643 3489999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcc
Q 004232 637 YGLSIVSEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 637 FGla~~~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
||+++......... +..++......++.++|||||||++|||++ |..||........ ...+.. ....
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~i~~-~~~~ 236 (281)
T 1mp8_A 160 FGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIEN-GERL 236 (281)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHT-TCCC
T ss_pred cccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHHHHc-CCCC
Confidence 99997653321110 000000111334567899999999999997 8888864332211 111111 1111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
. .....+ ..+.+++.+||+.||.+|||+.||++.|+.+.+.
T Consensus 237 ~-----~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 237 P-----MPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp C-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C-----CCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1 111112 2367899999999999999999999999988653
No 59
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6e-37 Score=322.81 Aligned_cols=249 Identities=27% Similarity=0.397 Sum_probs=186.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CC-------ceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NG-------TSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
++|.+.+.||+|+||.||+|+.. ++ ..||+|.+........+.+.+|+.++++++||||+++++++.+.+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 85 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD-- 85 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT--
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC--
Confidence 56888899999999999999854 33 469999997766667788999999999999999999999998753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc---
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--- 631 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--- 631 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 86 ------~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 154 (289)
T 4fvq_A 86 ------ENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKT 154 (289)
T ss_dssp ------CCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGG
T ss_pred ------CCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccc
Confidence 5799999999999999997643 2388999999999999999999997 8999999999999998876
Q ss_pred -----EEEecCCCCcccccccccccCC--CCCCc--c-cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc
Q 004232 632 -----AKLSDYGLSIVSEDINSVGGKQ--EDPNS--W-EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS 701 (766)
Q Consensus 632 -----~kl~DFGla~~~~~~~~~~~~~--~~~~~--~-~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~ 701 (766)
+||+|||++..........++. ..|.. . ..++.++|||||||++|||+||..|+...... .........
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-~~~~~~~~~ 233 (289)
T 4fvq_A 155 GNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-QRKLQFYED 233 (289)
T ss_dssp TBCCEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHT
T ss_pred cccceeeeccCcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-HHHHHHhhc
Confidence 9999999986543322111111 11111 1 33566889999999999999965544322211 111111111
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
...+..+ . . ..+.+++.+||+.||.+|||+.||++.|+.+....
T Consensus 234 ---~~~~~~~-~-~-------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 234 ---RHQLPAP-K-A-------AELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp ---TCCCCCC-S-S-------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred ---cCCCCCC-C-C-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 1111111 0 1 12668899999999999999999999999876543
No 60
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.5e-37 Score=333.95 Aligned_cols=262 Identities=14% Similarity=0.196 Sum_probs=187.0
Q ss_pred hcCCCcCCceecCCceeEEEEEecC------CceEEEEEccCChhhhH-----------HHHHHHHHHHHhCCCCCcccc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN------GTSVAIRCLPSSKKYTV-----------RNLKLRLDLLAKLRHPHLVCL 544 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~~-----------~~~~~e~~~l~~l~Hpniv~l 544 (766)
.++|++.+.||+|+||.||+|+... ++.||||.+........ ..+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998754 47899999876542211 123445667788899999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
++++.+.... ....++||||+ +|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||
T Consensus 114 ~~~~~~~~~~----~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDKNG----KSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEETT----EEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred EeeeeeccCC----cceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHE
Confidence 9998874211 13589999999 999999997642 3589999999999999999999997 899999999999
Q ss_pred EEc--CCCcEEEecCCCCcccccccccc-----------cCCC--CC--CcccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 625 LLN--EHRIAKLSDYGLSIVSEDINSVG-----------GKQE--DP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 625 Lld--~~~~~kl~DFGla~~~~~~~~~~-----------~~~~--~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
|++ .++.+||+|||+++......... ++.. .| .....++.++|||||||++|||+||+.||..
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999 88999999999996543321110 0000 00 1112355678999999999999999999974
Q ss_pred CccchH-HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 688 KGQFLQ-EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 688 ~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
...... .............++.++.+..... ...+.+++.+||+.||.+||++.+|++.|+.+...
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 264 NLKDPKYVRDSKIRYRENIASLMDKCFPAANA---PGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp GTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCC---CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHhhhhHHHHHHHhcccccC---HHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 221111 1111111111222333332211111 12467889999999999999999999999988753
No 61
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-37 Score=334.42 Aligned_cols=248 Identities=22% Similarity=0.366 Sum_probs=179.5
Q ss_pred CCCcCCceecCCceeEEEEEec--C--CceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLE--N--GTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~--~--g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.|++.+.||+|+||.||+|+.. + +..||||.++.. .....+++.+|+.++++++||||++++++|.+.+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~------ 163 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE------ 163 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCS------
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC------
Confidence 3666789999999999999863 2 246899998654 3345678999999999999999999999987643
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...++||||+++|+|.+++.+.. ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 164 -~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 164 -GSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp -SCCEEEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred -CCeEEEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecc
Confidence 25799999999999999997543 3478999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc----cCCCCCC--------cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 639 LSIVSEDINSVG----GKQEDPN--------SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 639 la~~~~~~~~~~----~~~~~~~--------~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
+++......... .....+. ....++.++|||||||++|||+| |..|+.......... .+.. ..
T Consensus 238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~--~~~~-~~- 313 (373)
T 3c1x_A 238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV--YLLQ-GR- 313 (373)
T ss_dssp --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHH--HHHT-TC-
T ss_pred ccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHH--HHHc-CC-
Confidence 997543211100 0000011 11345668899999999999999 566665432221111 1111 11
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
....|. ..+ ..+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 314 -~~~~p~---~~~----~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~ 355 (373)
T 3c1x_A 314 -RLLQPE---YCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355 (373)
T ss_dssp -CCCCCT---TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCC---CCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111 111 237789999999999999999999999999875
No 62
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.7e-36 Score=321.73 Aligned_cols=251 Identities=25% Similarity=0.408 Sum_probs=190.6
Q ss_pred hcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.++|.+.+.||+|+||.||+|+. .++..||||.++.. .....+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG-- 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS--
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC--
Confidence 46788899999999999999985 24588999999754 3445678999999999999999999999987753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP---------------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPG 613 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 613 (766)
..++||||+++|+|.+++.+... ...+++..+..++.+++.||+|||+. +
T Consensus 100 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ 170 (314)
T 2ivs_A 100 ------PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---K 170 (314)
T ss_dssp ------SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ------ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---C
Confidence 57999999999999999976432 13478999999999999999999997 8
Q ss_pred cccCCCCCCceEEcCCCcEEEecCCCCcccccccccc--cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CC
Q 004232 614 FFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVG--GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GP 682 (766)
Q Consensus 614 ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~--~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~ 682 (766)
|+||||||+||+++.++.+||+|||++.......... .....+..+ ..++.++|||||||++|||+| |+
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 250 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999996543221110 000001111 224567899999999999999 99
Q ss_pred CccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 683 SVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 683 ~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.|+......... ..+. ...... .....+ ..+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 251 ~p~~~~~~~~~~--~~~~-~~~~~~-----~~~~~~----~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 251 NPYPGIPPERLF--NLLK-TGHRME-----RPDNCS----EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp CSSTTCCGGGHH--HHHH-TTCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHH--HHhh-cCCcCC-----CCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 998643322111 1111 111111 111112 237789999999999999999999999998864
No 63
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.6e-36 Score=316.02 Aligned_cols=252 Identities=19% Similarity=0.307 Sum_probs=189.2
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+.. ++.||||+++... ....+.+.+|+.++++++||||++++++|.+.++ .
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------~ 82 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA------P 82 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS------S
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC------C
Confidence 56888899999999999999975 8899999997543 3456789999999999999999999999987632 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+.. ...+++..+..++.|++.||+|||+.. ++|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~ 160 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGT-NFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVK 160 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCS-SCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred CeEeeecccCCCcHHHHHhhcc-cCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccce
Confidence 5799999999999999998643 235899999999999999999999862 23999999999999999999999999887
Q ss_pred cccccccccccCC-CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccccc
Q 004232 641 IVSEDINSVGGKQ-EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVM 714 (766)
Q Consensus 641 ~~~~~~~~~~~~~-~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 714 (766)
.........++.. ..|.. ....+.++|||||||++|||+||+.||...... .............. ..
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~-----~~ 233 (271)
T 3kmu_A 161 FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--EIGMKVALEGLRPT-----IP 233 (271)
T ss_dssp CTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--HHHHHHHHSCCCCC-----CC
T ss_pred eeecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--HHHHHHHhcCCCCC-----CC
Confidence 5433222111111 01111 111222689999999999999999998743321 11111111111111 11
Q ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 715 ATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 715 ~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
...+ ..+.+++.+||+.||.+|||++||++.|+.+.
T Consensus 234 ~~~~----~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 234 PGIS----PHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1112 23778999999999999999999999999874
No 64
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-36 Score=318.81 Aligned_cols=252 Identities=20% Similarity=0.339 Sum_probs=189.0
Q ss_pred hcCCCcCCceecCCceeEEEEEecC----CceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|.+.+.||+|+||.||+|+... +..||||.+... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 85 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE----- 85 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----
Confidence 4678889999999999999998542 346999998764 344567899999999999999999999998653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ----~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 86 ----PTWIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECC
T ss_pred ----CCEEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCc
Confidence 4589999999999999997643 3488999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc--cCC-----CCC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcc
Q 004232 637 YGLSIVSEDINSVG--GKQ-----EDP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 637 FGla~~~~~~~~~~--~~~-----~~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
||++.......... ... ..| .....++.++|||||||++|||+| |+.|+......... ..+.. ...
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~--~~~~~-~~~- 232 (281)
T 3cc6_A 157 FGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI--GVLEK-GDR- 232 (281)
T ss_dssp CCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH--HHHHH-TCC-
T ss_pred cCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH--HHHhc-CCC-
Confidence 99986543321110 000 011 111345567899999999999999 99998643322111 11111 101
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
...+. ..+ ..+.+++.+||+.||.+||++.||++.|+.+.+.+.+
T Consensus 233 -~~~~~---~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 233 -LPKPD---LCP----PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp -CCCCT---TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCCC---CCC----HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 11111 111 2377899999999999999999999999998876543
No 65
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-36 Score=315.47 Aligned_cols=246 Identities=23% Similarity=0.393 Sum_probs=178.7
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChh----hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK----YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+.. |+.||||+++.... ...+.+.+|++++++++||||++++++|.+.+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP------ 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC------
Confidence 57888999999999999999975 88999999865432 23567899999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC--------CC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE--------HR 630 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--------~~ 630 (766)
..++||||+++|+|.+++... .+++..+..++.+++.||+|||+....+|+||||||+||+++. ++
T Consensus 80 --~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~ 153 (271)
T 3dtc_A 80 --NLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153 (271)
T ss_dssp ---CEEEEECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred --ceEEEEEcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence 679999999999999988632 4889999999999999999999985445999999999999986 67
Q ss_pred cEEEecCCCCccccccccccc------CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 631 IAKLSDYGLSIVSEDINSVGG------KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~~~------~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
.+||+|||++........... ..++......++.++|||||||++|||+||+.||......... ........
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--~~~~~~~~ 231 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA--YGVAMNKL 231 (271)
T ss_dssp CEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--HHHHTSCC
T ss_pred ceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HhhhcCCC
Confidence 899999999965433221110 0111111133566789999999999999999998743322111 11111111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
... .....+ ..+.+++.+||+.||.+|||+.||+++|+.
T Consensus 232 ~~~-----~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 232 ALP-----IPSTCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCC-----CCcccC----HHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111 111111 237789999999999999999999999975
No 66
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.7e-36 Score=315.45 Aligned_cols=247 Identities=23% Similarity=0.414 Sum_probs=190.5
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
++|++.+.||+|+||.||+|+..++..||+|.+..... ..+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~~ 78 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA--------PI 78 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS--------SC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC--------Ce
Confidence 56888899999999999999988889999999976543 3467899999999999999999999998753 57
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp EEEECCCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEeCCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccc
Confidence 99999999999999997653 3478999999999999999999997 899999999999999999999999999875
Q ss_pred cccccccc--cC-------CCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 643 SEDINSVG--GK-------QEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 643 ~~~~~~~~--~~-------~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
........ .. .++......++.++||||||+++|||+| |+.|+..... ......+... . ....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i~~~-~--~~~~~~ 228 (267)
T 3t9t_A 154 VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG-F--RLYKPR 228 (267)
T ss_dssp BCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTT-C--CCCCCT
T ss_pred cccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHHhcC-C--cCCCCc
Confidence 43211100 00 0000111344567899999999999999 8888864322 1112222111 0 111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..+ ..+.+++.+||+.||.+||++.|+++.|+++.+
T Consensus 229 ---~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 229 ---LAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ---TSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---cCc----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111 236789999999999999999999999999864
No 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.2e-37 Score=329.09 Aligned_cols=250 Identities=17% Similarity=0.293 Sum_probs=183.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC----
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD---- 555 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~---- 555 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++|||||+++++|.+.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467888999999999999999975 79999999987533 345678999999999999999999999987653100
Q ss_pred ---------------------------------------------CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHH
Q 004232 556 ---------------------------------------------DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWS 590 (766)
Q Consensus 556 ---------------------------------------------~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~ 590 (766)
.......++||||+++|+|.+++.+.......++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 00012379999999999999999876554556788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccc-----------------cc--
Q 004232 591 ERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV-----------------GG-- 651 (766)
Q Consensus 591 ~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~-----------------~~-- 651 (766)
.+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ++
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 8899999999999999997 8999999999999999999999999999765432100 00
Q ss_pred -CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHH
Q 004232 652 -KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIAN 730 (766)
Q Consensus 652 -~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~ 730 (766)
..++......++.++|||||||++|||++|..|+... ......... ..... ........+.+++.
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----~~~~~~~~~-~~~~~---------~~~~~~~~~~~li~ 307 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----VRIITDVRN-LKFPL---------LFTQKYPQEHMMVQ 307 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----HHHHHHHHT-TCCCH---------HHHHHCHHHHHHHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----HHHHHHhhc-cCCCc---------ccccCChhHHHHHH
Confidence 0000011134567889999999999999997765311 111111111 00000 00112234678999
Q ss_pred HhccCCCCCCCCHHHHHH
Q 004232 731 KCICSESWSRPSFEDILW 748 (766)
Q Consensus 731 ~C~~~~p~~RPs~~ev~~ 748 (766)
+||+.||.+||++.|+++
T Consensus 308 ~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 308 DMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHCSSGGGSCCHHHHHH
T ss_pred HHccCCCCcCCCHHHHhh
Confidence 999999999999999975
No 68
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.2e-36 Score=326.40 Aligned_cols=247 Identities=21% Similarity=0.356 Sum_probs=184.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCce----EEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS----VAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|++.+.||+|+||.||+|+.. +++. ||+|.+.... ....+.+.+|+.++++++||||++++++|.+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 87 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS----- 87 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS-----
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-----
Confidence 46888899999999999999854 4554 7888775432 23345677899999999999999999998643
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 88 ----~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 88 ----SLQLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp ----SEEEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred ----ccEEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 5799999999999999997642 3488899999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc--cCCCCC--------CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSVG--GKQEDP--------NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~~--~~~~~~--------~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++......... .....+ .....++.++|||||||++|||+| |+.||.......... .+. ...
T Consensus 159 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~--~~~-~~~- 234 (325)
T 3kex_A 159 FGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD--LLE-KGE- 234 (325)
T ss_dssp CSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH--HHH-TTC-
T ss_pred CCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH--HHH-cCC-
Confidence 99997653321110 000000 011345668899999999999999 999987543222111 111 111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
....+.... ..+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 235 -~~~~~~~~~-------~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 235 -RLAQPQICT-------IDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp -BCCCCTTBC-------TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred -CCCCCCcCc-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 111111111 125688999999999999999999999998764
No 69
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-36 Score=323.24 Aligned_cols=251 Identities=23% Similarity=0.390 Sum_probs=185.5
Q ss_pred cCCCcCCceecCCceeEEEEEecC-----CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN-----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
..|...+.||+|+||.||+|+... +..||||.++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 119 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK---- 119 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC----
Confidence 456677899999999999998642 3459999997543 344567899999999999999999999987653
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 120 ----~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 120 ----PMMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp ----SEEEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred ----CcEEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 6899999999999999997643 3489999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc-----------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccC
Q 004232 637 YGLSIVSEDINSVG-----------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 637 FGla~~~~~~~~~~-----------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
||+++......... ...++......++.++|||||||++|||+| |+.|+..... ......+.. ..
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~~~-~~ 267 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAIND-GF 267 (333)
T ss_dssp CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHT-TC
T ss_pred CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHC-CC
Confidence 99997643321100 000000111334567899999999999999 9999864322 111121211 11
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
....+ ...+ ..+.+++.+||+.||.+||++.||++.|+.+....+
T Consensus 268 --~~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 268 --RLPTP---MDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp --CCCCC---TTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred --cCCCc---ccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 11111 1111 236789999999999999999999999999876443
No 70
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=5.2e-36 Score=325.53 Aligned_cols=244 Identities=21% Similarity=0.335 Sum_probs=185.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.+.|++.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-- 88 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT-- 88 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC--
Confidence 467889999999999999999864 689999999975432 13578999999999999999999999998753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC----
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR---- 630 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---- 630 (766)
..++||||+++|+|.+++.+.. .+++.....++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 89 ------~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 89 ------DVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp ------EEEEEEECCCSCBHHHHHTTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred ------EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 7899999999999999997543 489999999999999999999997 899999999999998776
Q ss_pred cEEEecCCCCcccccccccccCCCCC-------CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc
Q 004232 631 IAKLSDYGLSIVSEDINSVGGKQEDP-------NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~~~~~~~~-------~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
.+||+|||+++..............+ .....++.++|||||||++|||++|..||..... ......+...
T Consensus 157 ~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~- 233 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITAV- 233 (361)
T ss_dssp CEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTT-
T ss_pred CEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhc-
Confidence 79999999997654322111111111 1123456789999999999999999999964322 2222222111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...+ ++......+ ..+.+++.+|++.||.+|||+.|+++
T Consensus 234 -~~~~-~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 -SYDF-DEEFFSQTS----ELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCCC-CHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCCC-CchhccCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111 111111112 23678999999999999999999975
No 71
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4e-36 Score=323.40 Aligned_cols=241 Identities=20% Similarity=0.275 Sum_probs=185.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~----- 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD----- 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS-----
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC-----
Confidence 367889999999999999999864 69999999996542 234567889999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|..++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 79 ---~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 ---RLCFVMEYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred ---EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 7899999999999999997643 378999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc----c-c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINS----V-G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~----~-~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|+++....... . + +..++......++.++|||||||++|||++|+.||..... ......+.... ..+
T Consensus 150 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~--~~~- 224 (337)
T 1o6l_A 150 GLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILMEE--IRF- 224 (337)
T ss_dssp TTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CCC-
T ss_pred cchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHcCC--CCC-
Confidence 99975321110 0 1 1111111223456789999999999999999999864332 12222221111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~ 749 (766)
| ...+ ..+.+++.+||+.||.+|| +++||++.
T Consensus 225 -p---~~~s----~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 -P---RTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -C---TTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -C---CCCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1 1112 2367899999999999999 89888753
No 72
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=321.06 Aligned_cols=243 Identities=20% Similarity=0.331 Sum_probs=184.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
+.|++.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 87 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT--- 87 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC---
Confidence 45888999999999999999864 689999999865422 23678999999999999999999999998753
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC----c
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR----I 631 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~ 631 (766)
..++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .
T Consensus 88 -----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 88 -----DVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp -----EEEEEEECCCSCBHHHHHTTSS---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCC
T ss_pred -----EEEEEEEcCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCC
Confidence 7899999999999999997543 489999999999999999999997 899999999999999877 8
Q ss_pred EEEecCCCCcccccccccc---cCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 632 AKLSDYGLSIVSEDINSVG---GKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~---~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
+||+|||+++......... ++. ++......++.++|||||||++|||++|+.||..... ......+....
T Consensus 157 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~~~~~- 233 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANVSAVN- 233 (326)
T ss_dssp EEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHTC-
T ss_pred EEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHhcC-
Confidence 9999999997653221111 111 1111123456789999999999999999999864322 11122111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....++ .....+ ..+.+++.+||+.||.+|||+.|+++
T Consensus 234 -~~~~~~-~~~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 234 -YEFEDE-YFSNTS----ALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp -CCCCHH-HHTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -CCcCcc-ccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111111 111111 23678999999999999999999986
No 73
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.4e-36 Score=323.86 Aligned_cols=252 Identities=23% Similarity=0.373 Sum_probs=191.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~ 553 (766)
.++|++.+.||+|+||.||+|+. .+++.||||.++... ....+.+.+|+.+++++ +||||++++++|.+.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~- 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG- 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC-
Confidence 46788899999999999999984 357889999997543 34467899999999999 9999999999998753
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTP---------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
..++||||+++|+|.+++..... ...+++..+..++.+++.||+|||+. +|+|||
T Consensus 101 -------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~d 170 (313)
T 1t46_A 101 -------PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 170 (313)
T ss_dssp -------SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred -------CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCC
Confidence 57999999999999999976532 12489999999999999999999997 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCcccccccccc---cC-----CCCC--CcccCCCCCCCEeehhHHHHHHhc-CCCcccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVSEDINSVG---GK-----QEDP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAAR 687 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~---~~-----~~~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~ 687 (766)
|||+||+++.++.+||+|||++.......... .. ...| .....++.++|||||||++|||+| |+.|+..
T Consensus 171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 250 (313)
T 1t46_A 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250 (313)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred CccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999999986543322110 00 0011 111345567899999999999999 9998864
Q ss_pred CccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 688 KGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
...... .......... . ..+ ...+ ..+.+++.+||+.||.+|||+.||+++|+++..
T Consensus 251 ~~~~~~--~~~~~~~~~~-~-~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 251 MPVDSK--FYKMIKEGFR-M-LSP---EHAP----AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp CCSSHH--HHHHHHHTCC-C-CCC---TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchhH--HHHHhccCCC-C-CCc---ccCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 332111 1111111100 0 011 1111 237789999999999999999999999998764
No 74
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=327.44 Aligned_cols=260 Identities=17% Similarity=0.251 Sum_probs=188.5
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..+|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.+++++. ||||+++++++...........
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 35788999999999999999996 478999999987666666778999999999996 9999999999864321111122
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||+. |+|.+++........+++..+..++.+++.||+|||+.. ++|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence 46899999996 799998875333345899999999999999999999972 1399999999999999999999999999
Q ss_pred Cccccccccc-----------------c---cCCCCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHH
Q 004232 640 SIVSEDINSV-----------------G---GKQEDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEEL 696 (766)
Q Consensus 640 a~~~~~~~~~-----------------~---~~~~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~ 696 (766)
++........ + +..++.. ....++.++|||||||++|||+||+.||...... ...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~ 262 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL--RIV 262 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--Hhh
Confidence 9764332110 0 0011111 1122345789999999999999999998632211 100
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
. . ......+ .... ..+.+++.+||+.||.+||++.|+++.|+.+.....
T Consensus 263 ~----~--~~~~~~~---~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 263 N----G--KYSIPPH---DTQY----TVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ---------CCCCTT---CCSS----GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred c----C--cccCCcc---cccc----hHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 0 0 0010000 0011 126688999999999999999999999999876543
No 75
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3e-37 Score=331.48 Aligned_cols=263 Identities=19% Similarity=0.274 Sum_probs=190.4
Q ss_pred cCCCcCCceecCCceeEEEEEe-----cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---- 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR---- 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS----
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC----
Confidence 5688899999999999999984 3688999999987776677889999999999999999999999875431
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 99 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 99 --QSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp --CEEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred --ceEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 36899999999999999997642 2488999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc---ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc---c
Q 004232 638 GLSIVSEDINSV---GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ---E 703 (766)
Q Consensus 638 Gla~~~~~~~~~---~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~---~ 703 (766)
|++......... .........+ ..++.++|||||||++|||+||+.|+................. .
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 251 (327)
T 3lxl_A 172 GLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS 251 (327)
T ss_dssp GGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHH
T ss_pred ccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHH
Confidence 999764322111 0000001111 1234578999999999999999999763221111000000000 0
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
...+.................+.+++.+||+.||.+|||+.||++.|+.+...
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 304 (327)
T 3lxl_A 252 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG 304 (327)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 00000000000000111123477899999999999999999999999987643
No 76
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=349.71 Aligned_cols=245 Identities=20% Similarity=0.344 Sum_probs=185.3
Q ss_pred CCcCC-ceecCCceeEEEEEec---CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 485 FDMSA-IMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 485 f~~~~-~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+.+.+ .||+|+||.||+|.+. ++..||||+++... ....+++.+|+++|++++|||||+++|+|.+.
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~-------- 408 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-------- 408 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS--------
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC--------
Confidence 33334 7999999999999864 46779999997643 34568899999999999999999999999753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 409 -~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGl 482 (613)
T 2ozo_A 409 -ALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGL 482 (613)
T ss_dssp -SEEEEEECCTTCBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCST
T ss_pred -CeEEEEEeCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccC
Confidence 5899999999999999997542 3589999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc---ccCCC------CC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccc
Q 004232 640 SIVSEDINSV---GGKQE------DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 640 a~~~~~~~~~---~~~~~------~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
++........ ..... .| .....++.++|||||||++|||+| |+.||...... +....+. .+....
T Consensus 483 a~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~-~~~~~~ 559 (613)
T 2ozo_A 483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIE-QGKRME 559 (613)
T ss_dssp TTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHH-TTCCCC
T ss_pred cccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHH-cCCCCC
Confidence 9765322110 00000 11 111345668999999999999998 99998743321 1111111 111111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
. | ... ...+.+|+.+||+.||.+||+|.+|++.|+.+..
T Consensus 560 ~--p---~~~----~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 560 C--P---PEC----PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp C--C---TTC----CHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred C--C---CcC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1 1 111 1347789999999999999999999999998764
No 77
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.9e-36 Score=321.38 Aligned_cols=253 Identities=19% Similarity=0.437 Sum_probs=190.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe--------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL--------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~--------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
.++|.+.+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++++ +||||++++++|.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46788899999999999999985 346789999997543 34567899999999999 899999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
+ ..++||||+++|+|.+++..... ...+++..+..++.+++.||+|||+. +|+|||
T Consensus 114 ~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 182 (334)
T 2pvf_A 114 G--------PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRD 182 (334)
T ss_dssp S--------CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred C--------ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCC
Confidence 3 67999999999999999976432 12488999999999999999999997 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCcccccccccc--cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCcccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVSEDINSVG--GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAAR 687 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~--~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~ 687 (766)
|||+||+++.++.+||+|||++.......... .....+..+ ..++.++|||||||++|||+| |+.|+..
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 262 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 99999999999999999999997543321110 000001111 234557899999999999999 9999864
Q ss_pred CccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 688 KGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
... ......+.. ..... .....+ ..+.+++.+||+.||.+||++.||++.|+.+....
T Consensus 263 ~~~--~~~~~~~~~-~~~~~-----~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 263 IPV--EELFKLLKE-GHRMD-----KPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp CCH--HHHHHHHHH-TCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCH--HHHHHHHhc-CCCCC-----CCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 322 111111111 11111 111111 23778999999999999999999999999987643
No 78
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.2e-36 Score=330.54 Aligned_cols=265 Identities=18% Similarity=0.217 Sum_probs=195.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.|.+.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.++ .
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~------~ 82 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTT------R 82 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTT------C
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCC------C
Confidence 46888999999999999999965 58999999997543 2335778899999999999999999999887542 2
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE----cCCCcEEEec
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHRIAKLSD 636 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~~~kl~D 636 (766)
..++||||+++|+|.+++.+......+++..+..++.+++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEec
Confidence 5799999999999999997654444489999999999999999999997 89999999999999 7788899999
Q ss_pred CCCCcccccccccccCCCCCCcc---------------cCCCCCCCEeehhHHHHHHhcCCCccccCc--cchHHHHhhh
Q 004232 637 YGLSIVSEDINSVGGKQEDPNSW---------------EMTKLEDDVFSFGFMLLESVAGPSVAARKG--QFLQEELDSL 699 (766)
Q Consensus 637 FGla~~~~~~~~~~~~~~~~~~~---------------~~~~~~~DV~SfGvil~ElltG~~p~~~~~--~~~~~~~~~~ 699 (766)
||+++..............+.+. ..++.++|||||||++|||+||+.||.... ......+..+
T Consensus 160 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 239 (396)
T 4eut_A 160 FGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (396)
T ss_dssp GGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred CCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence 99997654332211111111100 122346899999999999999999986322 1111222221
Q ss_pred hcccC---cccc----------c-cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 700 NSQEG---RQRL----------V-DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 700 ~~~~~---~~~~----------~-d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
..... ...+ . +..............+.+++.+||+.||++||+++|+++.++.+...
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11110 0000 0 00011122345556688999999999999999999999999988753
No 79
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.2e-36 Score=316.63 Aligned_cols=249 Identities=21% Similarity=0.340 Sum_probs=185.4
Q ss_pred cCCCcCCceecCCceeEEEEEecC----CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLEN----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..|++.+.||+|+||.||+|+..+ +..||||.+.... ....+.+.+|+.++++++||||++++++|.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 99 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE----- 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCC-----
Confidence 457788999999999999998542 3368999987543 445678999999999999999999999987654
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 100 --~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 100 --GSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp --SCCEEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSC
T ss_pred --CceEEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcc
Confidence 35799999999999999997543 3478999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccccc-----CCC-----CC--CcccCCCCCCCEeehhHHHHHHhcC-CCccccCccchHHHHhhhhcccC
Q 004232 638 GLSIVSEDINSVGG-----KQE-----DP--NSWEMTKLEDDVFSFGFMLLESVAG-PSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 638 Gla~~~~~~~~~~~-----~~~-----~~--~~~~~~~~~~DV~SfGvil~ElltG-~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
|+++.......... ... .| .....++.++|||||||++|||++| .+|+.......... .+.. .
T Consensus 173 g~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~--~~~~-~- 248 (298)
T 3f66_A 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV--YLLQ-G- 248 (298)
T ss_dssp GGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH--HHHT-T-
T ss_pred cccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH--HHhc-C-
Confidence 99965433211100 000 00 0113445678999999999999995 55554322221111 1111 1
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.....+. ..+ ..+.+++.+||+.||.+||++.|++++|+++..
T Consensus 249 -~~~~~~~---~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 249 -RRLLQPE---YCP----DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp -CCCCCCT---TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCc---cCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0111111 111 237789999999999999999999999999875
No 80
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=8e-37 Score=349.69 Aligned_cols=250 Identities=23% Similarity=0.395 Sum_probs=191.4
Q ss_pred HhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..++|++.+.||+|+||.||+|++..+..||||+++... ...++|.+|+++|++++|||||+++|+|.+.
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--------- 334 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE--------- 334 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---------
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeec---------
Confidence 346688889999999999999999888889999997644 2356799999999999999999999998652
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.++++... ...+++..++.++.||+.||+|||+. +|+||||||+|||+++++.+||+|||++
T Consensus 335 ~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 410 (535)
T 2h8h_A 335 PIYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 410 (535)
T ss_dssp SCEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTST
T ss_pred cceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccc
Confidence 5799999999999999997532 23488999999999999999999997 8999999999999999999999999999
Q ss_pred cccccccccc-cCCCCCCc--------ccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCcccccc
Q 004232 641 IVSEDINSVG-GKQEDPNS--------WEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 641 ~~~~~~~~~~-~~~~~~~~--------~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
+......... .....+.. ...++.++|||||||++|||+| |+.||..... .+....+.. .. ....
T Consensus 411 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i~~-~~--~~~~ 485 (535)
T 2h8h_A 411 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVER-GY--RMPC 485 (535)
T ss_dssp TTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHHHT-TC--CCCC
T ss_pred eecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHc-CC--CCCC
Confidence 7654321100 00000111 1345668999999999999999 8989864322 122222211 11 1111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
+ ...+ ..+.+|+.+||+.||++||||++|++.|+.+...
T Consensus 486 ~---~~~~----~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 486 P---PECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred C---CCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1 1111 2477899999999999999999999999987543
No 81
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=329.07 Aligned_cols=254 Identities=21% Similarity=0.360 Sum_probs=188.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
..++|++.+.||+|+||.||+|+. .++..||||.+.... ....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457788999999999999999985 246689999997542 33457789999999999 8999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCC--------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPG--------------------KVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 612 (766)
..++||||+++|+|.+++...... ..+++..+..++.+++.||+|||+.
T Consensus 123 --------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 191 (344)
T 1rjb_A 123 --------PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK--- 191 (344)
T ss_dssp --------SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred --------ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---
Confidence 579999999999999999764321 2378999999999999999999997
Q ss_pred CcccCCCCCCceEEcCCCcEEEecCCCCccccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-C
Q 004232 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-G 681 (766)
Q Consensus 613 ~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G 681 (766)
+|+||||||+||+++.++.+||+|||++......... . +..++......++.++|||||||++|||+| |
T Consensus 192 ~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 271 (344)
T 1rjb_A 192 SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271 (344)
T ss_dssp TEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred CcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCC
Confidence 8999999999999999999999999999654322110 0 001110112345668899999999999998 9
Q ss_pred CCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 682 PSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 682 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
..||....... ............ ..+ ...+ ..+.+++.+||+.||.+|||+.||++.|+.+...
T Consensus 272 ~~p~~~~~~~~--~~~~~~~~~~~~--~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 272 VNPYPGIPVDA--NFYKLIQNGFKM--DQP---FYAT----EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp CCSSTTCCCSH--HHHHHHHTTCCC--CCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCcccCCcHH--HHHHHHhcCCCC--CCC---CCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 99986433211 111111111110 011 1111 2377899999999999999999999999987653
No 82
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-36 Score=321.17 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=182.4
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||+||+|+..+|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 92 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER------- 92 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-------
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-------
Confidence 46788999999999999999998889999999986543 223567889999999999999999999988653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++ +|.+++.+.. ..+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 93 -~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 93 -CLTLVFEFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp -CEEEEEECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred -EEEEEEcCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcC
Confidence 68999999995 8888776543 3488999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc----ccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCccccc
Q 004232 640 SIVSEDINSV----GGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 640 a~~~~~~~~~----~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (766)
++........ .++. ..|. ....++.++|||||||++|||+||+.||...... ....+.............
T Consensus 166 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 245 (311)
T 3niz_A 166 ARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP 245 (311)
T ss_dssp CEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSG
T ss_pred ceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhh
Confidence 9764321111 0010 0111 1123566889999999999999999998743322 111111111110000000
Q ss_pred ---c------cc--ccCCCCHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 710 ---D------PV--VMATSSLE-----SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 710 ---d------~~--~~~~~~~~-----~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+ .. ........ ....+.+++.+|++.||.+|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 246 QVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0 00 00000000 1134678999999999999999999875
No 83
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=316.69 Aligned_cols=243 Identities=20% Similarity=0.288 Sum_probs=177.7
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh--------------------------hhHHHHHHHHHHHH
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--------------------------YTVRNLKLRLDLLA 534 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--------------------------~~~~~~~~e~~~l~ 534 (766)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788999999999999999985 4689999999865431 11356889999999
Q ss_pred hCCCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 004232 535 KLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGF 614 (766)
Q Consensus 535 ~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 614 (766)
+++||||+++++++.+... ...++||||+++|+|.+++.. ..+++.....++.|++.||+|||+. +|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~------~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNE------DHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECSSS------SEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEcCCC------CEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 9999999999999986431 368999999999999886543 3489999999999999999999997 89
Q ss_pred ccCCCCCCceEEcCCCcEEEecCCCCccccccccc-----ccCC-CCCCccc--C---CCCCCCEeehhHHHHHHhcCCC
Q 004232 615 FNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV-----GGKQ-EDPNSWE--M---TKLEDDVFSFGFMLLESVAGPS 683 (766)
Q Consensus 615 vHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~-----~~~~-~~~~~~~--~---~~~~~DV~SfGvil~ElltG~~ 683 (766)
+||||||+||+++.++.+||+|||++......... +... ..|.... . .+.++|||||||++|||++|+.
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 99999999999999999999999999654332110 1100 1111111 1 1346799999999999999999
Q ss_pred ccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 684 VAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 684 p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
||..... ......+.... ....++ ...+ ..+.+++.+||+.||.+||++.||++
T Consensus 239 pf~~~~~--~~~~~~~~~~~--~~~~~~---~~~~----~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 239 PFMDERI--MCLHSKIKSQA--LEFPDQ---PDIA----EDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SSCCSSH--HHHHHHHHHCC--CCCCSS---SCCC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCccH--HHHHHHHhccc--CCCCCc---cccC----HHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 9864322 11111111111 111111 1112 23678999999999999999999864
No 84
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-36 Score=322.23 Aligned_cols=245 Identities=16% Similarity=0.231 Sum_probs=185.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-------- 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-------- 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT--------
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC--------
Confidence 467889999999999999999864 68899999987543 34567889999999999999999999998763
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC--CCcEEEecCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE--HRIAKLSDYG 638 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 75 ELVMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 7899999999999999997543 3488999999999999999999997 8999999999999997 7899999999
Q ss_pred CCcccccccccccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 639 LSIVSEDINSVGGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 639 la~~~~~~~~~~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
++...............+. ....++.++|||||||++|||++|..||..... ......+.... ... ++
T Consensus 150 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~--~~~-~~ 224 (321)
T 1tki_A 150 QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENIMNAE--YTF-DE 224 (321)
T ss_dssp TCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC--CCC-CH
T ss_pred CCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHcCC--CCC-Ch
Confidence 9976533221111001111 112235678999999999999999999864332 22222221111 011 11
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 225 ~~~~~~s----~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EAFKEIS----IEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhhccCC----HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1111111 236789999999999999999999874
No 85
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.5e-36 Score=320.39 Aligned_cols=244 Identities=23% Similarity=0.336 Sum_probs=181.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~------- 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-------
Confidence 367899999999999999999865 789999999865432 23467889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 79 -IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp -EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred -eEEEEEEcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 689999999999999998754 3489999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc------ccCC--CCCCcc---cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 640 SIVSEDINSV------GGKQ--EDPNSW---EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 640 a~~~~~~~~~------~~~~--~~~~~~---~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
++........ .++. ..|... ...+.++|||||||++|||+||+.||.......... ....... ..
T Consensus 152 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-~~~~~~~---~~ 227 (323)
T 3tki_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDWKEKK---TY 227 (323)
T ss_dssp CEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-HHHHTTC---TT
T ss_pred cceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-HHHhccc---cc
Confidence 9654221110 0000 011111 112446899999999999999999997543321211 1111110 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+ ....+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 228 ~~~--~~~~~----~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 LNP--WKKID----SAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp STT--GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCc--cccCC----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 111 00111 236789999999999999999999764
No 86
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.5e-36 Score=318.25 Aligned_cols=249 Identities=21% Similarity=0.405 Sum_probs=189.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|+..++..||||.+.... ...+.+.+|++++++++||||+++++++.+. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---------~ 81 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE---------P 81 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS---------S
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC---------C
Confidence 46788899999999999999998888899999987543 2356789999999999999999999998643 4
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||++.
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 799999999999999986532 12488999999999999999999997 89999999999999999999999999997
Q ss_pred cccccccccc-CCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSVGG-KQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~~~-~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
.......... ....+..+ ..++.++|||||||++|||+| |+.|+..... ......+.. .. ....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~-~~--~~~~~ 232 (279)
T 1qpc_A 158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLER-GY--RMVRP 232 (279)
T ss_dssp ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHT-TC--CCCCC
T ss_pred cccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHHHhc-cc--CCCCc
Confidence 6543211110 00000011 234457899999999999999 8888864322 111111111 10 11111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
...+ ..+.+++.+||+.||.+|||+++|++.|+++...
T Consensus 233 ---~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 233 ---DNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp ---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---cccc----HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 1111 2477899999999999999999999999987654
No 87
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.4e-36 Score=317.37 Aligned_cols=250 Identities=20% Similarity=0.376 Sum_probs=180.3
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. ..||||+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP-------- 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC--------
Confidence 356888999999999999999864 35999998654 344567899999999999999999999976543
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 93 -~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (289)
T 3og7_A 93 -QLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGL 166 (289)
T ss_dssp -SCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred -ccEEEEEecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEcccee
Confidence 5799999999999999986543 3489999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc------ccCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 640 SIVSEDINSV------GGKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 640 a~~~~~~~~~------~~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
+......... .++. ..|.. ...++.++|||||||++|||++|+.||...... ..+..........
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~ 244 (289)
T 3og7_A 167 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR--DQIIEMVGRGSLS 244 (289)
T ss_dssp -----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH--HHHHHHHHHTSCC
T ss_pred ccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH--HHHHHHhcccccC
Confidence 8654321100 0010 01110 123445789999999999999999998643221 1111111111111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
.... ...... ...+.+++.+||+.||.+|||+.||+++|+++.
T Consensus 245 ~~~~-~~~~~~----~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 245 PDLS-KVRSNC----PKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCTT-SSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cchh-hccccC----CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1000 011111 234778999999999999999999999999864
No 88
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.2e-36 Score=320.55 Aligned_cols=252 Identities=21% Similarity=0.387 Sum_probs=184.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-----cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
+.|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.++
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG--- 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC---
Confidence 4477889999999999999984 368999999997543 3345789999999999999999999999987532
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
+..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 98 ---~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 98 ---NGIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp ---CCEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECC
T ss_pred ---ceEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECc
Confidence 35899999999999999996543 3488999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc---ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcCCCccccCccc------------hH
Q 004232 637 YGLSIVSEDINSV---GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQF------------LQ 693 (766)
Q Consensus 637 FGla~~~~~~~~~---~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~------------~~ 693 (766)
||++......... ......+..+ ..++.++|||||||++|||+||..|+...... ..
T Consensus 170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 249 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTV 249 (302)
T ss_dssp CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHH
T ss_pred ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCH
Confidence 9999765432211 0000111111 12334789999999999999999886421110 00
Q ss_pred HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 694 EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 694 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
............. ...... ...+.+++.+||+.||.+|||+.||+++|+.+.
T Consensus 250 ~~~~~~~~~~~~~-----~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 250 TRLVNTLKEGKRL-----PCPPNC----PDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHTTCCC-----CCCTTC----CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCC-----CCCCCC----CHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0011000000000 001111 134778999999999999999999999999875
No 89
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1e-35 Score=323.81 Aligned_cols=246 Identities=17% Similarity=0.293 Sum_probs=185.9
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++|||||++++++.+.+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~----- 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES----- 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 3467999999999999999999864 68999999996542 344677899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC---CcEEE
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKL 634 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl 634 (766)
..++||||+++|+|.+++.... .+++.....++.||+.||+|||+. +|+||||||+|||++.+ +.+||
T Consensus 102 ---~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 ---FHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp ---EEEEEECCCCSCBHHHHHTTCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred ---EEEEEEecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 7899999999999999887543 488999999999999999999997 89999999999999865 45999
Q ss_pred ecCCCCcccccccccccCCCCC-------CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 635 SDYGLSIVSEDINSVGGKQEDP-------NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 635 ~DFGla~~~~~~~~~~~~~~~~-------~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
+|||++...............+ .....++.++|||||||++|||++|+.||..... ...+..+... ...
T Consensus 173 ~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~--~~~ 248 (362)
T 2bdw_A 173 ADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAG--AYD 248 (362)
T ss_dssp CCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT--CCC
T ss_pred eecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhC--CCC
Confidence 9999997654322111111111 1113456789999999999999999999864332 1222222111 111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+.. ...+ ..+.+++.+||+.||.+||++.|+++.
T Consensus 249 ~~~~~~-~~~~----~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 YPSPEW-DTVT----PEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CCTTGG-GGSC----HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCcccc-cCCC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111 1111 236789999999999999999998864
No 90
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=322.80 Aligned_cols=247 Identities=22% Similarity=0.356 Sum_probs=183.2
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCce----EEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS----VAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
++|++.+.||+|+||.||+|+.. +++. ||+|.+... .....+.+.+|+.++++++||||++++++|.+.
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----- 89 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-----
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-----
Confidence 56888999999999999999853 4544 577777543 234567899999999999999999999999864
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++|+||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 90 ----~~~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 90 ----TVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ----SEEEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred ----CceEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEcc
Confidence 4789999999999999997653 3488999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccccc----CC----CCC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSVGG----KQ----EDP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~~~----~~----~~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++.......... .+ ..| .....++.++|||||||++|||+| |+.||........... + ....
T Consensus 161 fG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~--~-~~~~- 236 (327)
T 3lzb_A 161 FGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI--L-EKGE- 236 (327)
T ss_dssp TTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH--H-HTTC-
T ss_pred CcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH--H-HcCC-
Confidence 999976432211100 00 001 111345668899999999999999 9999875433222111 1 1111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
....+ ...+ ..+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 237 -~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 237 -RLPQP---PICT----IDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -CCCCC---TTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -CCCCC---ccCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 11111 1111 236789999999999999999999999998874
No 91
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.2e-36 Score=321.73 Aligned_cols=254 Identities=18% Similarity=0.294 Sum_probs=189.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||.||+++. .+|+.||||++........+.+.+|++++++++||||+++++++....+ ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERG----AKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEET----TEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccC----CCc
Confidence 35788999999999999999996 5799999999876666667889999999999999999999999874321 113
Q ss_pred eEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 689999999999999988752 1234589999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccc-----------------ccccCCCCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccC---ccchHHHH
Q 004232 640 SIVSEDIN-----------------SVGGKQEDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARK---GQFLQEEL 696 (766)
Q Consensus 640 a~~~~~~~-----------------~~~~~~~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~---~~~~~~~~ 696 (766)
+....... +..+..++... ...++.++|||||||++|||++|+.||... ........
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 86432110 00111111111 112356889999999999999999998521 11111111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
. . ......+ ...+ ..+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 261 ~---~---~~~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 261 Q---N---QLSIPQS---PRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp H---C---C--CCCC---TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred h---c---cCCCCcc---ccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 0 0 0011110 1111 247789999999999999999999999998754
No 92
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=4.3e-36 Score=321.11 Aligned_cols=258 Identities=21% Similarity=0.355 Sum_probs=187.3
Q ss_pred CCcCCceecCCceeEEEEEec-----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
|++.+.||+|+||.||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 107 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGA----- 107 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTT-----
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCC-----
Confidence 478899999999999998753 68899999997643 3456789999999999999999999999987532
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...++||||+++|+|.+++.+.. +++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 108 -~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 108 -ASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp -TEEEEEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred -ceEEEEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcc
Confidence 36899999999999999997543 88999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc---ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhh---hcccC
Q 004232 639 LSIVSEDINSV---GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSL---NSQEG 704 (766)
Q Consensus 639 la~~~~~~~~~---~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~---~~~~~ 704 (766)
++......... ......+..+ ..++.++|||||||++|||+||+.|+.............. .....
T Consensus 180 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 259 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259 (318)
T ss_dssp GCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHH
T ss_pred ccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHH
Confidence 99765432110 0000111111 1234578999999999999999999863221110000000 00000
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..+..+..............+.+++.+||+.||.+|||+.||++.|+.+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 260 LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 000000000000011112347889999999999999999999999998764
No 93
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.4e-36 Score=315.83 Aligned_cols=252 Identities=12% Similarity=0.127 Sum_probs=187.7
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+.+++++ +|+|++++++++.+..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-------- 79 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-------- 79 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT--------
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc--------
Confidence 5688999999999999999985 579999999986543 234578899999999 7999999999987653
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc-----EEEe
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-----AKLS 635 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-----~kl~ 635 (766)
..++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 80 ~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 80 HNVLVIDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred eeEEEEEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 789999999 999999997643 3489999999999999999999997 8999999999999987765 9999
Q ss_pred cCCCCcccccccccc--------cCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhh
Q 004232 636 DYGLSIVSEDINSVG--------GKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSL 699 (766)
Q Consensus 636 DFGla~~~~~~~~~~--------~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~ 699 (766)
|||+++......... .....+. ....++.++|||||||++|||+||+.||...... ....+..+
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~ 233 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 233 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHH
Confidence 999997654321110 0000110 1123456789999999999999999998753221 11111111
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
..... ....+......+ ..+.+++.+||+.||.+||++++|++.|+++...
T Consensus 234 ~~~~~--~~~~~~~~~~~~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 234 GEKKQ--STPLRELCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHH--HSCHHHHTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred Hhhcc--CccHHHHHhhCc----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 11100 000011111111 2477899999999999999999999999988754
No 94
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-36 Score=320.84 Aligned_cols=262 Identities=19% Similarity=0.308 Sum_probs=184.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHh--CCCCCcccccceeecCCCCCCcC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~--l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..++|++.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++.+..+.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~---- 106 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGS---- 106 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG----
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC----
Confidence 4467999999999999999999875 8999999986432 2344455555554 4999999999999876321
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCcccCCCCCCceEEcCCCcEE
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-----IPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrdlk~~NILld~~~~~k 633 (766)
....++||||+++|+|.+++++. .+++..+..++.+++.||+|||+.. .++|+||||||+||+++.++.+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 13689999999999999999754 3889999999999999999999852 24799999999999999999999
Q ss_pred EecCCCCccccccccc--------ccCC--CCCCc--ccCCCC------CCCEeehhHHHHHHhcC----------CCcc
Q 004232 634 LSDYGLSIVSEDINSV--------GGKQ--EDPNS--WEMTKL------EDDVFSFGFMLLESVAG----------PSVA 685 (766)
Q Consensus 634 l~DFGla~~~~~~~~~--------~~~~--~~~~~--~~~~~~------~~DV~SfGvil~ElltG----------~~p~ 685 (766)
|+|||+++........ .++. ..|.. ...... ++|||||||++|||+|| +.|+
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 9999999654321111 0000 01110 011222 38999999999999999 5555
Q ss_pred ccCc--cchHHHHhhhhcccCccccccccccC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 686 ARKG--QFLQEELDSLNSQEGRQRLVDPVVMA-TSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 686 ~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
.... ................ .+.... ....+....+.+++.+||+.||.+|||+.||++.|+.+.+.++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 263 HDLVPSDPSYEDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hhhcCCCCchhhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 3211 1111111111111111 111110 1112455668899999999999999999999999999876543
No 95
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.9e-36 Score=323.21 Aligned_cols=240 Identities=21% Similarity=0.323 Sum_probs=181.8
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|..+++.+ +||||+++++++.+.+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 97 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD---- 97 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC----
Confidence 578999999999999999999864 68999999997542 23456788899999988 6999999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|..++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 98 ----~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~D 167 (353)
T 3txo_A 98 ----RLFFVMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLAD 167 (353)
T ss_dssp ----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred ----EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcc
Confidence 7899999999999999997653 388999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc-cCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSVG-GKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~~-~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||+++......... .....+. ....++.++|||||||++|||++|+.||..... ......+.... .
T Consensus 168 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~----~ 241 (353)
T 3txo_A 168 FGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILNDE----V 241 (353)
T ss_dssp CTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC----C
T ss_pred ccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHHHcCC----C
Confidence 99997532211110 0001111 112356789999999999999999999974332 22222222211 1
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH------HHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSF------EDILW 748 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~------~ev~~ 748 (766)
.-|. ..+ ..+.+++.+|++.||.+||++ .||++
T Consensus 242 ~~p~---~~~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 VYPT---WLH----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCCT---TSC----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCCC---CCC----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1111 111 236789999999999999998 66654
No 96
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-36 Score=326.72 Aligned_cols=246 Identities=17% Similarity=0.266 Sum_probs=187.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.|++.+.||+|+||.||+|+.. +|+.||+|.+..........+.+|+++|++++|||||++++++.+..
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-------- 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-------- 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS--------
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC--------
Confidence 467999999999999999999864 68999999998766556678999999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC--CCcEEEecCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE--HRIAKLSDYG 638 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~--~~~~kl~DFG 638 (766)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEEcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 7899999999999999987542 3489999999999999999999997 8999999999999984 4789999999
Q ss_pred CCcccccccccc---cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 639 LSIVSEDINSVG---GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 639 la~~~~~~~~~~---~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+++......... ++ .++......++.++|||||||++|||+||+.||..... ......+.... .. .++
T Consensus 197 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~--~~-~~~ 271 (387)
T 1kob_A 197 LATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCD--WE-FDE 271 (387)
T ss_dssp TCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCC--CC-CCS
T ss_pred cceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--CC-CCc
Confidence 997653321111 11 11111112345678999999999999999999874332 12222221111 01 111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 272 ~~~~~~s----~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 DAFSSVS----PEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp STTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccCC----HHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 1111112 236789999999999999999999863
No 97
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.9e-36 Score=320.80 Aligned_cols=263 Identities=22% Similarity=0.347 Sum_probs=195.8
Q ss_pred CHHHHHHHhcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCccccc
Q 004232 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLL 545 (766)
Q Consensus 474 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~ 545 (766)
...++....++|++.+.||+|+||.||+|+. .+++.||||.++... ....+.+.+|+.+++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444555567899999999999999999974 356889999997643 34457789999999999 799999999
Q ss_pred ceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 004232 546 GHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------GKVLNWSERLAVLIGVAKAVQFLHTGVIP 612 (766)
Q Consensus 546 g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 612 (766)
++|.+.+ ...++||||+++|+|.+++..... ...+++..+..++.+++.||+|||+.
T Consensus 98 ~~~~~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--- 167 (316)
T 2xir_A 98 GACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR--- 167 (316)
T ss_dssp EEECCTT-------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---
T ss_pred EEEecCC-------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---
Confidence 9988654 257999999999999999976532 12278999999999999999999997
Q ss_pred CcccCCCCCCceEEcCCCcEEEecCCCCccccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-C
Q 004232 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-G 681 (766)
Q Consensus 613 ~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G 681 (766)
+|+||||||+||+++.++.+||+|||+++........ . +..++......++.++|||||||++|||+| |
T Consensus 168 ~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g 247 (316)
T 2xir_A 168 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 247 (316)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999998654321110 0 000110112345668899999999999999 9
Q ss_pred CCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 682 PSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 682 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
+.|+....... .....+.. ...... + ...+ ..+.+++.+||+.||.+|||+.||++.|+.+.+..
T Consensus 248 ~~p~~~~~~~~-~~~~~~~~-~~~~~~--~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 248 ASPYPGVKIDE-EFCRRLKE-GTRMRA--P---DYTT----PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSSTTCCCSH-HHHHHHHH-TCCCCC--C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCcccchhH-HHHHHhcc-CccCCC--C---CCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 99986432211 11111111 111111 1 1111 23678899999999999999999999999987643
No 98
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.4e-36 Score=323.66 Aligned_cols=251 Identities=14% Similarity=0.177 Sum_probs=187.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+.+++++ +||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-------- 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-------- 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT--------
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC--------
Confidence 5688899999999999999985 5799999999865432 24588999999999 9999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc-----EEEe
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI-----AKLS 635 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~-----~kl~ 635 (766)
..++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred ccEEEEEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 689999999 999999997642 3589999999999999999999997 8999999999999998887 9999
Q ss_pred cCCCCccccccccc--------ccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhh
Q 004232 636 DYGLSIVSEDINSV--------GGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSL 699 (766)
Q Consensus 636 DFGla~~~~~~~~~--------~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~ 699 (766)
|||+++........ ......+. ....++.++|||||||++|||+||+.||...... ....+..+
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i 232 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKI 232 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHH
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHH
Confidence 99999754322110 00001111 1123455789999999999999999999753221 22222221
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
.... .....+...... ..+.+++.+||+.||.+||++++|.+.|+++...
T Consensus 233 ~~~~--~~~~~~~~~~~~-----p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 233 GDTK--RATPIEVLCENF-----PEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHH--HHSCHHHHTTTC-----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred Hhhh--ccCCHHHHhccC-----hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 1100 000000001111 1478899999999999999999999999987753
No 99
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-35 Score=321.85 Aligned_cols=242 Identities=25% Similarity=0.337 Sum_probs=183.5
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+.|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||+++++|.+.+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 127 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH------ 127 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC------
Confidence 4488889999999999999985 57999999998643 2334577899999999999999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||++ |++.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 128 --~~~lv~e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 128 --TAWLVMEYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp --EEEEEEECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred --eEEEEEecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 7899999998 68888775432 3489999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccccCC--CCCC-----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 639 LSIVSEDINSVGGKQ--EDPN-----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 639 la~~~~~~~~~~~~~--~~~~-----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
++..........++. ..|. ....++.++|||||||++|||+||+.|+..... ......+.... ......
T Consensus 200 ~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~--~~~~~~~~~~~-~~~~~~- 275 (348)
T 1u5q_A 200 SASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQNE-SPALQS- 275 (348)
T ss_dssp TCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC-CCCCCC-
T ss_pred CceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcC-CCCCCC-
Confidence 997654332221111 1111 123456688999999999999999999864322 12222221111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ ..+.+++.+||+.||.+|||++|+++.
T Consensus 276 ---~~~~----~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 ---GHWS----EYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCCC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1112 236788999999999999999999864
No 100
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.5e-36 Score=325.03 Aligned_cols=256 Identities=20% Similarity=0.319 Sum_probs=192.0
Q ss_pred HHHHHHhcCCCcCCceecCCceeEEEEEec------CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCccccccee
Q 004232 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLE------NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHC 548 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~ 548 (766)
+++....++|++.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678999999999999999999754 47889999997543 34456789999999999999999999999
Q ss_pred ecCCCCCCcCcceEEEEEEccCCCChhhhhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 004232 549 IDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENT-------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKT 621 (766)
Q Consensus 549 ~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~ 621 (766)
.+.+ ..++||||+++|+|.+++.... ....+++..+..++.+++.||+|||+. +|+||||||
T Consensus 98 ~~~~--------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp 166 (322)
T 1p4o_A 98 SQGQ--------PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAA 166 (322)
T ss_dssp CSSS--------SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSG
T ss_pred ccCC--------ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCcc
Confidence 7653 5799999999999999987532 113468999999999999999999997 899999999
Q ss_pred CceEEcCCCcEEEecCCCCccccccccc--ccC------CCCCC--cccCCCCCCCEeehhHHHHHHhc-CCCccccCcc
Q 004232 622 NNILLNEHRIAKLSDYGLSIVSEDINSV--GGK------QEDPN--SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQ 690 (766)
Q Consensus 622 ~NILld~~~~~kl~DFGla~~~~~~~~~--~~~------~~~~~--~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~ 690 (766)
+||+++.++.+||+|||++......... ... ...|. ....++.++|||||||++|||+| |+.|+.....
T Consensus 167 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 167 RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp GGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred ceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 9999999999999999999654322111 000 00111 11345667899999999999999 7888764322
Q ss_pred chHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 691 FLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
......+.. ...... ....+ ..+.+++.+||+.||.+|||+.||++.|+++.
T Consensus 247 --~~~~~~~~~-~~~~~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 247 --EQVLRFVME-GGLLDK-----PDNCP----DMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp --HHHHHHHHT-TCCCCC-----CTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred --HHHHHHHHc-CCcCCC-----CCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 111111111 111111 01111 23678999999999999999999999998764
No 101
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1e-35 Score=322.63 Aligned_cols=245 Identities=19% Similarity=0.318 Sum_probs=182.9
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh-----hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK-----YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~-----~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
+.|++.+.||+|+||+||+|+. .+|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG---- 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC----
Confidence 4688999999999999999986 4689999999864321 23578999999999999999999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc---E
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---A 632 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~ 632 (766)
..++||||+++|+|.+++.+.. ....+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +
T Consensus 100 ----~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 100 ----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp ----EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred ----EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 7899999999999988776432 233578999999999999999999997 8999999999999986554 9
Q ss_pred EEecCCCCcccccccccc----cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 633 KLSDYGLSIVSEDINSVG----GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~----~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
||+|||++.......... ++ .++......++.++|||||||++|||+||+.||....... ...+....
T Consensus 173 kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~i~~~~- 248 (351)
T 3c0i_A 173 KLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERL---FEGIIKGK- 248 (351)
T ss_dssp EECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHH---HHHHHHTC-
T ss_pred EEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHH---HHHHHcCC-
Confidence 999999997654322111 01 0111111335678899999999999999999997532211 11111111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. .++......+ ..+.+++.+||+.||.+|||+.|+++
T Consensus 249 -~~-~~~~~~~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 249 -YK-MNPRQWSHIS----ESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -CC-CCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CC-CCccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01 1111111111 23678999999999999999999985
No 102
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.4e-35 Score=316.19 Aligned_cols=257 Identities=19% Similarity=0.334 Sum_probs=183.0
Q ss_pred HhcCCCcCCceecCCceeEEEEEec----CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
..++|.+.+.||+|+||.||+|+.. ++..||||.++.. .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888899999999999999854 3458999998754 334467799999999999999999999999875421
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcC---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISEN---TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
.....++||||+++|+|.+++... .....+++..+..++.+++.||+|||+. +|+||||||+||+++.++.
T Consensus 112 ---~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 112 ---GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred ---CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 112469999999999999998532 1234589999999999999999999997 8999999999999999999
Q ss_pred EEEecCCCCccccccccc--ccCCC------CC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhh
Q 004232 632 AKLSDYGLSIVSEDINSV--GGKQE------DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~--~~~~~------~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~ 700 (766)
+||+|||++......... ..... .| .....++.++|||||||++|||+| |..|+......... ..+.
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~--~~~~ 263 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY--DYLL 263 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH--HHHH
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH--HHHH
Confidence 999999998654322110 00000 01 011334567899999999999999 88888643322111 1111
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
. ...... ....+ ..+.+++.+||+.||.+||++.+|++.|+.+.+
T Consensus 264 ~-~~~~~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 264 H-GHRLKQ-----PEDCL----DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp T-TCCCCC-----BTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c-CCCCCC-----Ccccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1 111111 11111 247789999999999999999999999998865
No 103
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6e-36 Score=313.47 Aligned_cols=250 Identities=22% Similarity=0.389 Sum_probs=184.1
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.++|++.+.||+|+||.||+|+.. |+.||||.++... ..+.+.+|++++++++||||+++++++.+.. ..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------~~ 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-------GG 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---------C
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-------Cc
Confidence 467888999999999999999874 8899999997543 4567899999999999999999999987643 25
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
.++||||+++|+|.+++.+.. ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 165 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 165 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred eEEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccc
Confidence 799999999999999987542 12378889999999999999999997 89999999999999999999999999986
Q ss_pred ccccccccccCC---CCCC--cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 642 VSEDINSVGGKQ---EDPN--SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 642 ~~~~~~~~~~~~---~~~~--~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
............ ..|. ....++.++|||||||++|||+| |+.|+........ ...+.. ... +....
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~~~~~-~~~-----~~~~~ 237 (278)
T 1byg_A 166 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEK-GYK-----MDAPD 237 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--HHHHTT-TCC-----CCCCT
T ss_pred cccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHhc-CCC-----CCCcc
Confidence 543321111100 0111 11335567899999999999999 9999864332111 111111 101 11111
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
..+ ..+.+++.+||+.||.+||++.|+++.|+.+...+
T Consensus 238 ~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 238 GCP----PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCC----HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 112 34778999999999999999999999999987543
No 104
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-36 Score=318.77 Aligned_cols=251 Identities=23% Similarity=0.388 Sum_probs=192.6
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..++|++.+.||+|+||.||+|+.. ++..||||.+.... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------- 82 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP------- 82 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-------
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-------
Confidence 4567888999999999999999975 48899999997543 34578899999999999999999999987653
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.+.. ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 83 -~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~ 157 (288)
T 3kfa_A 83 -PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGL 157 (288)
T ss_dssp -SEEEEEECCTTEEHHHHHHHCC-TTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCG
T ss_pred -CEEEEEEcCCCCcHHHHHHhcc-cCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcc
Confidence 6899999999999999997643 24589999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccccc---------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccc
Q 004232 640 SIVSEDINSVG---------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 640 a~~~~~~~~~~---------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
+.......... ...++......++.++|||||||++|||++ |..|+.......... .+.. .. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~--~~~~-~~--~~~ 232 (288)
T 3kfa_A 158 SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE--LLEK-DY--RME 232 (288)
T ss_dssp GGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH--HHHT-TC--CCC
T ss_pred ceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH--HHhc-cC--CCC
Confidence 86543221110 001111111345567899999999999999 888886433222111 1111 10 001
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
.+ ...+ ..+.+++.+|++.||.+|||+.||++.|+.+.+.
T Consensus 233 ~~---~~~~----~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 233 RP---EGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC---CCCC----HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11 1111 3477899999999999999999999999987753
No 105
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=326.39 Aligned_cols=240 Identities=21% Similarity=0.351 Sum_probs=182.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+.+|++++|||||++++++.+.+
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~------ 88 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE------ 88 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC------
Confidence 57889999999999999999864 68899999986532 233577889999999999999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++|+|..++.+.. .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 89 --~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 160 (384)
T 4fr4_A 89 --DMFMVVDLLLGGDLRYHLQQNV---HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFN 160 (384)
T ss_dssp --EEEEEECCCTTEEHHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccc
Confidence 7899999999999999997643 488999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc---cCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH-HhhhhcccCccc
Q 004232 639 LSIVSEDINSVG---GKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE-LDSLNSQEGRQR 707 (766)
Q Consensus 639 la~~~~~~~~~~---~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~-~~~~~~~~~~~~ 707 (766)
+++......... ++. ..|.. ...++.++|||||||++|||+||+.||.......... ...+... ...
T Consensus 161 ~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~--~~~ 238 (384)
T 4fr4_A 161 IAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT--VVT 238 (384)
T ss_dssp TCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHC--CCC
T ss_pred eeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhc--ccC
Confidence 997653321111 111 11111 1235668899999999999999999996433222221 1111110 111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCC-HHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPS-FEDIL 747 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~ 747 (766)
+ | ...+ ..+.+++.+||+.||.+||+ +++|.
T Consensus 239 ~--p---~~~s----~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 239 Y--P---SAWS----QEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp C--C---TTSC----HHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred C--C---CcCC----HHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 1 1 1111 23778999999999999998 66654
No 106
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.9e-36 Score=323.20 Aligned_cols=240 Identities=21% Similarity=0.292 Sum_probs=181.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 82 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT----- 82 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----
Confidence 46788999999999999999995 5789999999864321 22457899999999999999999999998763
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+ +|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+||
T Consensus 83 ---~~~lv~E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 83 ---DIVMVIEYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp ---EEEEEECCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCS
T ss_pred ---EEEEEEECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEe
Confidence 689999999 789999887653 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccccc---CC--CCCCcc--cC-CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVGG---KQ--EDPNSW--EM-TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~~---~~--~~~~~~--~~-~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++........... +. ..|... .. .+.++|||||||++|||++|+.||...... .+...-......
T Consensus 153 G~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~ 226 (336)
T 3h4j_B 153 GLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP------NLFKKVNSCVYV 226 (336)
T ss_dssp SCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST------TCBCCCCSSCCC
T ss_pred ccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH------HHHHHHHcCCCC
Confidence 99976543221111 11 011111 11 245789999999999999999998643211 000000000000
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.| ...+ ..+.+++.+|++.||.+|||++||++.
T Consensus 227 ~p---~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 227 MP---DFLS----PGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp CC---TTSC----HHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred Cc---ccCC----HHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01 1111 236789999999999999999999764
No 107
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=8.4e-36 Score=325.81 Aligned_cols=239 Identities=18% Similarity=0.282 Sum_probs=177.4
Q ss_pred CCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 488 SAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
.+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|++++++++|||||+++++|.+.+ ..++||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--------~~~lv~ 165 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN--------DIVLVM 165 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS--------EEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC--------EEEEEE
Confidence 56799999999999986 469999999998766666788999999999999999999999998753 789999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE--cCCCcEEEecCCCCcccc
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL--NEHRIAKLSDYGLSIVSE 644 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl--d~~~~~kl~DFGla~~~~ 644 (766)
||+++|+|.+++.+.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 9999999999886542 3488999999999999999999997 89999999999999 567899999999997654
Q ss_pred cccccccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCC
Q 004232 645 DINSVGGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATS 717 (766)
Q Consensus 645 ~~~~~~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 717 (766)
...........+. ....++.++|||||||++|||+||+.||..... ...+..+.... ..+.++. ....
T Consensus 241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~~~--~~~~~~~-~~~~ 315 (373)
T 2x4f_A 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AETLNNILACR--WDLEDEE-FQDI 315 (373)
T ss_dssp TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC--CCSCSGG-GTTS
T ss_pred CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcc--CCCChhh-hccC
Confidence 3221111111111 112345578999999999999999999874332 22222222111 1111111 1111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 718 SLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 718 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
+ ..+.+++.+|++.||.+||++.|+++
T Consensus 316 ~----~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 316 S----EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp C----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C----HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2 23678999999999999999999987
No 108
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-35 Score=315.87 Aligned_cols=240 Identities=20% Similarity=0.330 Sum_probs=184.9
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ----- 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS-----
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC-----
Confidence 357889999999999999999864 69999999997542 233567889999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 80 ---~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 ---QIFMIMDYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred ---EEEEEEeCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 7899999999999999997643 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-ccCCCC--C--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 638 GLSIVSEDINSV-GGKQED--P--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 638 Gla~~~~~~~~~-~~~~~~--~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
|+++........ .++..+ | .....++.++|||||||++|||++|+.||..... ......+.... ..+ |
T Consensus 151 g~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~--~~~--p- 223 (318)
T 1fot_A 151 GFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKILNAE--LRF--P- 223 (318)
T ss_dssp SSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHCC--CCC--C-
T ss_pred CcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--CCC--C-
Confidence 999765432211 111110 1 1123456789999999999999999999864322 22222222111 111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
...+ ..+.+++.+|++.||.+|| +++||++
T Consensus 224 --~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 224 --PFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --TTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 1112 2367899999999999999 8888874
No 109
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.5e-36 Score=313.74 Aligned_cols=252 Identities=17% Similarity=0.224 Sum_probs=181.9
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-------- 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS--------
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC--------
Confidence 46888999999999999999988899999999865432 23467889999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++ +|.+++.... ..+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred eEEEEEEecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 68999999996 8988887543 3488999999999999999999997 8999999999999999999999999998
Q ss_pred cccccccc-----cccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCc---c-
Q 004232 641 IVSEDINS-----VGGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGR---Q- 706 (766)
Q Consensus 641 ~~~~~~~~-----~~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~---~- 706 (766)
........ .++.. ..|. ....++.++|||||||++|||+||+.||....... ...+......... .
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T 1ob3_A 148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227 (288)
T ss_dssp HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred cccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchh
Confidence 65432111 01100 1111 11235678899999999999999999987433211 1111111000000 0
Q ss_pred ----cccccccc-------CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 707 ----RLVDPVVM-------ATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 707 ----~~~d~~~~-------~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...++... ..........+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00011000 0000011234678999999999999999999875
No 110
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.5e-36 Score=347.47 Aligned_cols=239 Identities=21% Similarity=0.339 Sum_probs=182.2
Q ss_pred CceecCCceeEEEEEec---CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceEE
Q 004232 489 AIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
+.||+|+||.||+|.+. .++.||||+++... ....+++.+|+++|++++|||||+++|+|.+. ..+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~---------~~~ 445 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE---------SWM 445 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS---------SEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---------CEE
Confidence 47999999999999753 46789999997543 23467899999999999999999999999643 479
Q ss_pred EEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 564 LVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|||||++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 446 lv~E~~~~g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp EEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EEEEccCCCCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999999997643 489999999999999999999997 8999999999999999999999999999765
Q ss_pred cccccc---ccCCC------CC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCccccccc
Q 004232 644 EDINSV---GGKQE------DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 644 ~~~~~~---~~~~~------~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
...... ..... .| .....++.++|||||||++|||+| |+.||...... .....+ ........ +
T Consensus 520 ~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i-~~~~~~~~--p 594 (635)
T 4fl3_A 520 RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAML-EKGERMGC--P 594 (635)
T ss_dssp TC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHH-HTTCCCCC--C
T ss_pred ccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-HcCCCCCC--C
Confidence 322110 00000 01 111345668999999999999999 99998743321 111111 11111111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
...+ ..+.+++.+||+.||.+||+|.+|++.|+...
T Consensus 595 ---~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 595 ---AGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp ---TTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred ---CCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 1112 34778999999999999999999999999865
No 111
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.7e-35 Score=328.41 Aligned_cols=246 Identities=17% Similarity=0.260 Sum_probs=185.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++|||||++++++.+.+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 83 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG----- 83 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----
Confidence 346789999999999999999985 579999999986543 344677899999999999999999999998763
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc---CCCcEEE
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN---EHRIAKL 634 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl 634 (766)
..++||||+++|+|.+.+.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++ .++.+||
T Consensus 84 ---~~~lv~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL 154 (444)
T 3soa_A 84 ---HHYLIFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKL 154 (444)
T ss_dssp ---EEEEEECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred ---EEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEE
Confidence 7899999999999999987653 388999999999999999999997 899999999999998 4578999
Q ss_pred ecCCCCccccccccc----ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 635 SDYGLSIVSEDINSV----GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 635 ~DFGla~~~~~~~~~----~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
+|||++......... .++ .++......++.++||||+||++|||++|..||..... ......+... ..
T Consensus 155 ~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~--~~ 230 (444)
T 3soa_A 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQIKAG--AY 230 (444)
T ss_dssp CCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHT--CC
T ss_pred ccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHhC--CC
Confidence 999999655432211 011 11111113456789999999999999999999864332 2222222111 11
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+.. ...+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 231 ~~~~~~~-~~~s----~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 231 DFPSPEW-DTVT----PEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CCCTTTT-TTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCcccc-ccCC----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1112211 1112 236789999999999999999999864
No 112
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=312.94 Aligned_cols=248 Identities=20% Similarity=0.337 Sum_probs=187.5
Q ss_pred cCCCcCC-ceecCCceeEEEEEec---CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSA-IMGEGSYGKLYKGRLE---NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~-~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|.+.+ .||+|+||.||+|+.. ++..||||.++.. .....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------ 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC------
Confidence 3455555 8999999999999853 5788999999764 344567899999999999999999999998432
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ---~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ---ALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp ---SEEEEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred ---CcEEEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 5899999999999999986532 3489999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc---cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 638 GLSIVSEDINSVG---GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 638 Gla~~~~~~~~~~---~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|++.......... .....+..+ ..++.++|||||||++|||+| |+.||...... .....+.. ...
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~-~~~ 231 (287)
T 1u59_A 155 GLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQ-GKR 231 (287)
T ss_dssp TTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHT-TCC
T ss_pred cceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhc-CCc
Confidence 9997543221110 000001111 224557899999999999999 99998643321 11111111 111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
... ....+ ..+.+++.+||+.||.+||++.||++.|+.+...
T Consensus 232 ~~~-----~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 232 MEC-----PPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp CCC-----CTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCC-----CCCcC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111 11112 2477899999999999999999999999988753
No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-35 Score=310.25 Aligned_cols=248 Identities=19% Similarity=0.308 Sum_probs=183.6
Q ss_pred CCcCCceecCCceeEEEEEec-C---CceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 485 FDMSAIMGEGSYGKLYKGRLE-N---GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
|...+.||+|+||.||+|+.. + +..||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 95 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE------- 95 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS-------
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC-------
Confidence 555689999999999999853 2 2379999987543 345678999999999999999999999998654
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||+.+|+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 170 (298)
T 3pls_A 96 GLPHVLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGL 170 (298)
T ss_dssp SCCEEEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTS
T ss_pred CCcEEEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCC
Confidence 23489999999999999997633 3578999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccccc----CCCCCC--------cccCCCCCCCEeehhHHHHHHhcCCCcc-ccCccchHHHHhhhhcccCcc
Q 004232 640 SIVSEDINSVGG----KQEDPN--------SWEMTKLEDDVFSFGFMLLESVAGPSVA-ARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 640 a~~~~~~~~~~~----~~~~~~--------~~~~~~~~~DV~SfGvil~ElltG~~p~-~~~~~~~~~~~~~~~~~~~~~ 706 (766)
++.......... ....+. ....++.++|||||||++|||+||..|+ .......... .+.. ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~--~~~~-~~-- 245 (298)
T 3pls_A 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH--FLAQ-GR-- 245 (298)
T ss_dssp SCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHH--HHHT-TC--
T ss_pred cccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHH--Hhhc-CC--
Confidence 965432211100 000000 1123456789999999999999965554 3222221111 1111 10
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
....+ ...+ ..+.+++.+||+.||.+|||++|++++|+++...
T Consensus 246 ~~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 246 RLPQP---EYCP----DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp CCCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCC---ccch----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111 1111 2377899999999999999999999999998753
No 114
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=321.85 Aligned_cols=244 Identities=18% Similarity=0.231 Sum_probs=173.5
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..+.|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||++++++|.+.+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT------- 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-------
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-------
Confidence 3567999999999999999999975 58899999997543 3467889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~D 636 (766)
..++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 122 -~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 122 -EISLVLELVTGGELFDRIVEKG---YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp -EEEEEECCCCSCBHHHHHTTCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred -eEEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEcc
Confidence 7899999999999999987543 488999999999999999999997 8999999999999975 88999999
Q ss_pred CCCCccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 637 YGLSIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 637 FGla~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
||+++........ + +..++......++.++|||||||++|||+||+.||....... .....+.... ....
T Consensus 195 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~i~~~~--~~~~ 271 (349)
T 2w4o_A 195 FGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-FMFRRILNCE--YYFI 271 (349)
T ss_dssp CC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-HHHHHHHTTC--CCCC
T ss_pred CccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-HHHHHHHhCC--CccC
Confidence 9998754332111 0 111111112345678999999999999999999986433221 1112221111 1111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+. ....+ ..+.+++.+|++.||++|||+.|+++
T Consensus 272 ~~~-~~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 272 SPW-WDEVS----LNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTT-TTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Cch-hhhCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 11112 23678999999999999999999876
No 115
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-35 Score=354.40 Aligned_cols=256 Identities=31% Similarity=0.482 Sum_probs=168.4
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEE
Q 004232 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (766)
Q Consensus 117 l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (766)
+++|++|+|++|.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|+.|+|++|.+++.+|..++.+++|++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 44444555555555445555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCcc
Q 004232 197 MRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSG 272 (766)
Q Consensus 197 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~~ 272 (766)
|++|++++.+|..+.++++|++|+|++|++++.+|. ++.+++|++|++++|++++.+|.. ...|+.+++++|+++|
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 555555555555555555555555555555544443 444555555555555555444432 2344455555555544
Q ss_pred CC----------------------------------------------------------------------cccccCCC
Q 004232 273 EI----------------------------------------------------------------------PKQYGQLN 282 (766)
Q Consensus 273 ~~----------------------------------------------------------------------p~~~~~l~ 282 (766)
.+ |..++.++
T Consensus 553 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~ 632 (768)
T 3rgz_A 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632 (768)
T ss_dssp BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSB
T ss_pred cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccc
Confidence 44 44455567
Q ss_pred CCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecC
Q 004232 283 QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFR 362 (766)
Q Consensus 283 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~ 362 (766)
+|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.|+.++++
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCCCcCC
Q 004232 363 GNCLSSNVQN 372 (766)
Q Consensus 363 ~N~l~~~~~~ 372 (766)
+|.++|.+|.
T Consensus 713 ~N~l~g~iP~ 722 (768)
T 3rgz_A 713 NNNLSGPIPE 722 (768)
T ss_dssp SSEEEEECCS
T ss_pred CCcccccCCC
Confidence 9999886653
No 116
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.1e-35 Score=313.19 Aligned_cols=256 Identities=17% Similarity=0.272 Sum_probs=184.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN----- 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----
Confidence 35688999999999999999985 57899999998752 3445678899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.... ....+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|
T Consensus 106 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 106 ---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred ---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEe
Confidence 7899999999999999886421 224588999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccccc----cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSVG----GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~~----~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||++.......... ++ .++......++.++|||||||++|||++|+.|+.............+.. ......
T Consensus 180 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~ 258 (310)
T 2wqm_A 180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-CDYPPL 258 (310)
T ss_dssp C------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-TCSCCC
T ss_pred ccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-ccCCCC
Confidence 99986543221110 00 0000111234567899999999999999999986433222222222111 111111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
. ....+ ..+.+++.+||+.||.+||++.||++.|+.+....
T Consensus 259 ~----~~~~~----~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 259 P----SDHYS----EELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp C----TTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred c----ccccC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 0 01112 23678999999999999999999999999886543
No 117
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-35 Score=313.39 Aligned_cols=250 Identities=16% Similarity=0.235 Sum_probs=185.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~----- 107 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG----- 107 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC-----
Confidence 478999999999999999999964 68999999987542 233577899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 108 ---QLYVDMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp ---EEEEEEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSC
T ss_pred ---eEEEEEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecC
Confidence 7899999999999999997653 488999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc------cc---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 638 GLSIVSEDINS------VG---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 638 Gla~~~~~~~~------~~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
|++........ .+ +..++......++.++|||||||++|||+||+.||......... ..+.........
T Consensus 179 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~ 256 (309)
T 2h34_A 179 GIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMG--AHINQAIPRPST 256 (309)
T ss_dssp CC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHH--HHHHSCCCCGGG
T ss_pred ccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHH--HHhccCCCCccc
Confidence 99865432210 00 11111112234567899999999999999999998743322111 111111000000
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHHh
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRP-SFEDILWNLQYAAQ 755 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-s~~ev~~~L~~~~~ 755 (766)
.. ...+ ..+.+++.+||+.||.+|| +++++++.|+.+..
T Consensus 257 ~~----~~~~----~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 257 VR----PGIP----VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp TS----TTCC----THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred cC----CCCC----HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 11 1111 2367889999999999999 99999999998654
No 118
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5e-36 Score=325.37 Aligned_cols=255 Identities=15% Similarity=0.180 Sum_probs=185.3
Q ss_pred cCCCcCCceecCCceeEEEEEec---------CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCccc----------
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE---------NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVC---------- 543 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~---------- 543 (766)
++|.+.+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57889999999999999999865 3889999998754 45788999999999999998
Q ss_pred -----ccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 544 -----LLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 544 -----l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
+++++...+ ...++||||+ +|+|.+++.... ...+++..+..++.|++.||+|||+. +|+|||
T Consensus 117 ~~i~~~~~~~~~~~-------~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVHQD-------KYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEETT-------TEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSC
T ss_pred cCccchhhccccCC-------cEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCC
Confidence 455655432 3789999999 999999998642 23589999999999999999999997 899999
Q ss_pred CCCCceEEcCCC--cEEEecCCCCcccccccccc-------c-CCCCCC-------cccCCCCCCCEeehhHHHHHHhcC
Q 004232 619 VKTNNILLNEHR--IAKLSDYGLSIVSEDINSVG-------G-KQEDPN-------SWEMTKLEDDVFSFGFMLLESVAG 681 (766)
Q Consensus 619 lk~~NILld~~~--~~kl~DFGla~~~~~~~~~~-------~-~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG 681 (766)
|||+||+++.++ .+||+|||+++......... . ....+. ....++.++|||||||++|||+||
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g 264 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYG 264 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhC
Confidence 999999999988 99999999996543321100 0 000111 112345678999999999999999
Q ss_pred CCccccCccchHHHHhhhh-cccCcccccccccc-CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 682 PSVAARKGQFLQEELDSLN-SQEGRQRLVDPVVM-ATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 682 ~~p~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
+.||............... .......+.++... ...+ ..+.+++.+||+.||.+||+++||+++|+++.+...
T Consensus 265 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 265 FLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp CCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 9998753211111111100 01111222221110 0111 337789999999999999999999999999886543
No 119
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.7e-35 Score=317.86 Aligned_cols=254 Identities=26% Similarity=0.462 Sum_probs=188.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCce--EEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTS--VAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|+.. +|.. ||||.++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-----
Confidence 57888999999999999999854 5664 4999887532 33456789999999999 8999999999998763
Q ss_pred CcceEEEEEEccCCCChhhhhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCce
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENT-------------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNI 624 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NI 624 (766)
..++||||+++|+|.+++.+.. ....+++..+..++.+++.||+|||+. +|+||||||+||
T Consensus 100 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NI 173 (327)
T 1fvr_A 100 ---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNI 173 (327)
T ss_dssp ---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred ---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceE
Confidence 7899999999999999997642 123589999999999999999999997 899999999999
Q ss_pred EEcCCCcEEEecCCCCcccccccccccCCCC-----CC--cccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 625 LLNEHRIAKLSDYGLSIVSEDINSVGGKQED-----PN--SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 625 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~-----~~--~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
+++.++.+||+|||+++.............. |. ....++.++|||||||++|||+| |+.||..... ....
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~ 251 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELY 251 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHH
T ss_pred EEcCCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--HHHH
Confidence 9999999999999998643221111000000 00 11223567899999999999998 9999864322 1222
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhccc
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQET 759 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~~ 759 (766)
..+.. ..... .+ ...+ ..+.+++.+||+.||.+||++.|+++.|+.+......
T Consensus 252 ~~~~~-~~~~~--~~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 304 (327)
T 1fvr_A 252 EKLPQ-GYRLE--KP---LNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304 (327)
T ss_dssp HHGGG-TCCCC--CC---TTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred HHhhc-CCCCC--CC---CCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcC
Confidence 22211 10000 01 1111 2377899999999999999999999999998865543
No 120
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=316.31 Aligned_cols=237 Identities=22% Similarity=0.244 Sum_probs=175.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+..|+..+.++ +||||++++++|.+.+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~------ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG------ 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC------
Confidence 56889999999999999999975 79999999886532 23344455566555555 9999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+ +|+|.+++.... ..++|..+..++.+++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 131 --~~~lv~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 131 --ILYLQTELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp --EEEEEEECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred --EEEEEEecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 789999999 679998887653 3489999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 639 LSIVSEDINSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 639 la~~~~~~~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
++......... .+..++.. ...++.++|||||||++|||++|..|+.... .+..+.... ..+
T Consensus 203 ~a~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~el~~g~~~~~~~~-----~~~~~~~~~-----~~~ 271 (311)
T 3p1a_A 203 LLVELGTAGAGEVQEGDPRYMAPELL-QGSYGTAADVFSLGLTILEVACNMELPHGGE-----GWQQLRQGY-----LPP 271 (311)
T ss_dssp TCEECC------CCCCCGGGCCGGGG-GTCCSTHHHHHHHHHHHHHHHHTCCCCSSHH-----HHHHHTTTC-----CCH
T ss_pred eeeecccCCCCcccCCCccccCHhHh-cCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHhccC-----CCc
Confidence 98654332111 11111111 1245678899999999999999976654211 111111110 111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
......+ ..+.+++.+||+.||.+|||++|+++
T Consensus 272 ~~~~~~~----~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 EFTAGLS----SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccCCC----HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1111111 33778999999999999999999975
No 121
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=320.09 Aligned_cols=253 Identities=22% Similarity=0.380 Sum_probs=189.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-----cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-----ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+.
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 116 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---- 116 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC----
Confidence 5688889999999999999984 3689999999987666667889999999999999999999999876531
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
...++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 117 --~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Df 189 (326)
T 2w1i_A 117 --RNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDF 189 (326)
T ss_dssp ---CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCC
T ss_pred --CceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecC
Confidence 25799999999999999997653 3489999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc---ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH-----------
Q 004232 638 GLSIVSEDINSV---GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE----------- 695 (766)
Q Consensus 638 Gla~~~~~~~~~---~~~~~~~~~~--------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~----------- 695 (766)
|++......... ......+..+ ...+.++|||||||++|||+||..|+..........
T Consensus 190 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T 2w1i_A 190 GLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269 (326)
T ss_dssp TTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHH
T ss_pred cchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhH
Confidence 999765332111 0001111111 123457899999999999999998875321111000
Q ss_pred --HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 696 --LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 696 --~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+.......... ...... ...+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 270 ~~~~~~~~~~~~~-----~~~~~~----~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 270 FHLIELLKNNGRL-----PRPDGC----PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHHHHTTCCC-----CCCTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCC-----CCCCcc----cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 00010000000 001111 2347789999999999999999999999998763
No 122
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2e-35 Score=309.24 Aligned_cols=245 Identities=18% Similarity=0.230 Sum_probs=186.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.|++.+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-------- 79 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-------- 79 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--------
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC--------
Confidence 356888999999999999999864 57899999997665556788999999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE---cCCCcEEEecC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 6899999999999999887643 388999999999999999999997 89999999999999 78899999999
Q ss_pred CCCcccccccccccCCCCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 638 GLSIVSEDINSVGGKQEDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 638 Gla~~~~~~~~~~~~~~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
|++...............+.+ ...++.++|||||||++|||+||+.||..... ......+.... ......
T Consensus 154 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~--~~~~~~ 229 (277)
T 3f3z_A 154 GLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTD--SEVMLKIREGT--FTFPEK 229 (277)
T ss_dssp TTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CCCCHH
T ss_pred ccceeccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCC--CCCCch
Confidence 998654332211111111100 12356789999999999999999999874332 11122221111 111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ... ...+.+++.+|++.||.+||++.|+++.
T Consensus 230 ~~-~~~----~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 230 DW-LNV----SPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HH-TTS----CHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred hh-hcC----CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 011 1346789999999999999999999864
No 123
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-35 Score=331.49 Aligned_cols=241 Identities=23% Similarity=0.346 Sum_probs=185.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|.+.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~----- 89 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS----- 89 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----
Confidence 357888999999999999999965 799999999965432 23567899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 90 ---~~~lv~E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 90 ---DIFMVMEYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp ---EEEEEEECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred ---EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEec
Confidence 7899999999999999997543 489999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCCc-------cc-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVGGKQEDPNS-------WE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~~~~~~~~~-------~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++...............+.+ .. ..+.++|||||||++|||++|+.||..... ......+... ...
T Consensus 161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~~--~~~-- 234 (476)
T 2y94_A 161 GLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTLFKKICDG--IFY-- 234 (476)
T ss_dssp SSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHHHHHHHTT--CCC--
T ss_pred cchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHHHHHHhcC--CcC--
Confidence 999765432211111111111 11 124578999999999999999999974332 2222222111 001
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.|. ..+ ..+.+++.+||+.||.+|||+.||++.
T Consensus 235 ~p~---~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 235 TPQ---YLN----PSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp CCT---TCC----HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCc---cCC----HHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 111 111 236789999999999999999999863
No 124
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.2e-35 Score=323.35 Aligned_cols=244 Identities=18% Similarity=0.234 Sum_probs=177.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||+||+++.. +++.||||++..... ..+.+.+|+.++++++|||||++++++.+.+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 89 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT-------- 89 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS--------
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC--------
Confidence 457889999999999999999965 789999999975432 2356889999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc--EEEecCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--AKLSDYG 638 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~kl~DFG 638 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 90 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 90 HLAIIMEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEEEEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 7899999999999999987643 388999999999999999999997 8999999999999987765 9999999
Q ss_pred CCccccccccc---ccCCC--CCCc--ccCC-CCCCCEeehhHHHHHHhcCCCccccCcc--chHHHHhhhhcccCcccc
Q 004232 639 LSIVSEDINSV---GGKQE--DPNS--WEMT-KLEDDVFSFGFMLLESVAGPSVAARKGQ--FLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 639 la~~~~~~~~~---~~~~~--~~~~--~~~~-~~~~DV~SfGvil~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 708 (766)
+++........ .++.. .|.. ...+ +.++|||||||++|||++|+.||..... ........+... ...+
T Consensus 164 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~--~~~~ 241 (361)
T 3uc3_A 164 YSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSV--KYSI 241 (361)
T ss_dssp CC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTT--CCCC
T ss_pred ccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcC--CCCC
Confidence 98643221111 01110 0110 1112 2237999999999999999999864321 112222222111 1111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+.. ..+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 242 ~~~~---~~s----~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 PDDI---RIS----PECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CTTS---CCC----HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCcC---CCC----HHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1110 111 236789999999999999999999865
No 125
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1e-35 Score=313.90 Aligned_cols=247 Identities=20% Similarity=0.316 Sum_probs=184.9
Q ss_pred hcCCCcCC-ceecCCceeEEEEEe---cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 482 TNNFDMSA-IMGEGSYGKLYKGRL---ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 482 ~~~f~~~~-~lG~G~fg~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
.++|.+.+ .||+|+||.||+|.. .+++.||||.++... ....+++.+|++++++++||||+++++++..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 89 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA----- 89 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-----
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC-----
Confidence 35577777 999999999999964 347889999997543 2336789999999999999999999999843
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
+..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 90 ----~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 90 ----ESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp ----SSEEEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred ----CCcEEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEc
Confidence 25799999999999999998643 388999999999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccccc---ccCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhccc
Q 004232 636 DYGLSIVSEDINSV---GGKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 636 DFGla~~~~~~~~~---~~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
|||++......... ......+..+ ..++.++|||||||++|||+| |+.|+....... ....+ ...
T Consensus 160 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~-~~~ 236 (291)
T 1xbb_A 160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAML-EKG 236 (291)
T ss_dssp CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH-HTT
T ss_pred cCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH-HcC
Confidence 99998654322111 0000001111 123457899999999999999 999986433211 11111 111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..... ....+ ..+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 237 ~~~~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 237 ERMGC-----PAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp CCCCC-----CTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCC-----CCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111 11112 237789999999999999999999999998764
No 126
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.2e-35 Score=315.44 Aligned_cols=252 Identities=18% Similarity=0.252 Sum_probs=170.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN------- 76 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-------
Confidence 457888999999999999999854 68999999986543 223467889999999999999999999988753
Q ss_pred ceEEEEEEccCCCChhhhhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENT---PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||++ |+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 77 -~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 77 -KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp -EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred -eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECc
Confidence 7899999999 59999886532 123488999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc----ccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccC--
Q 004232 637 YGLSIVSEDINSV----GGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEG-- 704 (766)
Q Consensus 637 FGla~~~~~~~~~----~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~-- 704 (766)
||+++........ .++. ..|.. ...++.++|||||||++|||+||+.||....... ...+........
T Consensus 152 fg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 231 (317)
T 2pmi_A 152 FGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES 231 (317)
T ss_dssp CSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTT
T ss_pred CccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 9999754321111 0010 01111 1235678899999999999999999987543211 111111100000
Q ss_pred -------ccc---------------cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 -------RQR---------------LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 -------~~~---------------~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ...+...... ...+.+++.+|++.||.+|||++|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPL----DGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp TCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCC----CHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HhhhhhhhhhcccccccccchhHHHhhcccccccC----CHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 0000000011 1247899999999999999999998753
No 127
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.5e-35 Score=325.09 Aligned_cols=237 Identities=21% Similarity=0.326 Sum_probs=176.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.++||+|+||+||+|+.. +++.||||+++... ....+.+.+|..++.++ +|||||++++++.+.+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~---- 126 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES---- 126 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC----
Confidence 467999999999999999999965 68899999997542 22345678899999887 8999999999988753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
.+++||||+++|+|..++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 127 ----~~~lV~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 127 ----RLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred ----EEEEEEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 7899999999999999997653 388999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccc-cc---ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc------hHHH-Hhhhhc
Q 004232 637 YGLSIVSEDIN-SV---GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF------LQEE-LDSLNS 701 (766)
Q Consensus 637 FGla~~~~~~~-~~---~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~------~~~~-~~~~~~ 701 (766)
||+++...... .. .++. ++......++.++|||||||++|||++|+.||...... .... ...+..
T Consensus 197 FGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~ 276 (396)
T 4dc2_A 197 YGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276 (396)
T ss_dssp CTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH
T ss_pred cceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc
Confidence 99997522111 11 1111 11111234567889999999999999999999632110 1111 111111
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
. ...+ | ...+ ..+.+++.+|++.||.+||++
T Consensus 277 -~-~~~~--p---~~~s----~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 277 -K-QIRI--P---RSLS----VKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -C-CCCC--C---TTSC----HHHHHHHHHHTCSCTTTSTTC
T ss_pred -c-ccCC--C---CcCC----HHHHHHHHHHhcCCHhHcCCC
Confidence 0 1111 1 1112 236789999999999999995
No 128
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-35 Score=309.23 Aligned_cols=239 Identities=21% Similarity=0.297 Sum_probs=167.3
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|++.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 86 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD------ 86 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC------
Confidence 5799999999999999999985 578999999987542 233567899999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+ +|++.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 87 --~~~lv~e~~-~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 87 --EIIMVIEYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp --CEEEEEECC-CEEHHHHHHTSS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred --eEEEEehhc-CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 689999999 678888876543 489999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccccc---CC-C-CCCc--c-cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 639 LSIVSEDINSVGG---KQ-E-DPNS--W-EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 639 la~~~~~~~~~~~---~~-~-~~~~--~-~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
++........... +. . .|.. . ...+.++|||||||++|||+||+.||...... .....+... ...+
T Consensus 158 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~--~~~~-- 231 (275)
T 2eue_A 158 LSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNG--VYTL-- 231 (275)
T ss_dssp CC---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT--CCCC--
T ss_pred cceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC--CCCC--
Confidence 9865433211111 10 0 1110 1 12256789999999999999999998743321 111111111 1111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+ ...+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 232 ~---~~~~----~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 232 P---KFLS----PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp C---TTSC----HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred C---ccCC----HHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 1111 236789999999999999999999754
No 129
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.2e-37 Score=324.81 Aligned_cols=254 Identities=17% Similarity=0.315 Sum_probs=170.4
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHh--CCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~--l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|.+.+.||+|+||.||+|+.. |+.||||++.... .+.+.+|.+++.. ++||||+++++++.+..+. ..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~----~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT----WT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSS----SE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCc----cc
Confidence 56889999999999999999875 8999999986533 3556778888877 7999999999998876421 12
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCceEEcCCCcE
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLH--------TGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
..++||||+++|+|.+++.+. .+++..+..++.+++.||+||| +. +|+||||||+|||++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCE
Confidence 689999999999999999754 3778889999999999999999 54 89999999999999999999
Q ss_pred EEecCCCCcccccccccc--------cCC--CCCCccc--------CCCCCCCEeehhHHHHHHhcC----------CCc
Q 004232 633 KLSDYGLSIVSEDINSVG--------GKQ--EDPNSWE--------MTKLEDDVFSFGFMLLESVAG----------PSV 684 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~--------~~~--~~~~~~~--------~~~~~~DV~SfGvil~ElltG----------~~p 684 (766)
||+|||+++......... ++. ..|.... .++.++|||||||++|||+|| ..|
T Consensus 148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p 227 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 227 (303)
T ss_dssp -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCT
T ss_pred EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecc
Confidence 999999996543321110 000 0111000 111368999999999999999 444
Q ss_pred cccCccc--hHHHHhhhhcccCccccccccccC-CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 685 AARKGQF--LQEELDSLNSQEGRQRLVDPVVMA-TSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 685 ~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
+...... ............ ...+.... ....+....+.+++.+||+.||.+|||+.||+++|+.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 228 YYDLVPSDPSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTTCC-CCCCC-CHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccccCCCCccHHHHHHHHHHh----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 4321100 000000000000 01111111 1122455678999999999999999999999999998754
No 130
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2e-36 Score=333.77 Aligned_cols=250 Identities=18% Similarity=0.259 Sum_probs=186.7
Q ss_pred HHHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecC
Q 004232 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~ 551 (766)
.++....++|++.+.||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|+.+++.++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 445556788999999999999999999965 689999999865321 2234578899999999999999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
+ .+|+||||+++|+|.+++++. .+++.....++.+|+.||+|||+. +|+||||||+|||++.+++
T Consensus 142 ~--------~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 142 R--------YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp S--------EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred C--------EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 3 789999999999999998754 378889999999999999999997 8999999999999999999
Q ss_pred EEEecCCCCcccccccc-----cccCCC--CCCcc--cC----CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhh
Q 004232 632 AKLSDYGLSIVSEDINS-----VGGKQE--DPNSW--EM----TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDS 698 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~-----~~~~~~--~~~~~--~~----~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~ 698 (766)
+||+|||+++....... ..++.. .|... .. ++.++|||||||++|||+||+.||..... ......
T Consensus 207 ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~ 284 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--VGTYSK 284 (410)
T ss_dssp EEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH
T ss_pred EEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--hhHHHH
Confidence 99999999976433211 111110 11100 11 44678999999999999999999974332 222222
Q ss_pred hhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 004232 699 LNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWS--RPSFEDILWN 749 (766)
Q Consensus 699 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~ 749 (766)
+........+.+. ...+ ..+.+|+.+|++.+|.+ ||+++||.+.
T Consensus 285 i~~~~~~~~~p~~---~~~s----~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 285 IMNHKNSLTFPDD---NDIS----KEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHTHHHHCCCCTT---CCCC----HHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHhccccccCCCc---cccc----HHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 2211101111111 1112 23678899999999988 9999998764
No 131
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.8e-36 Score=321.65 Aligned_cols=254 Identities=24% Similarity=0.368 Sum_probs=189.9
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-C-----CceEEEEEccCCh-hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-N-----GTSVAIRCLPSSK-KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~-----g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
..++|++.+.||+|+||.||+|+.. + +..||||.+.... ....+.+.+|+.+++++ +||||++++++|.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3577899999999999999999853 2 3479999997643 34467799999999999 8999999999998753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENT-----------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKT 621 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~ 621 (766)
..++||||+++|+|.+++.... ....+++..+..++.+++.||+|||+. +|+||||||
T Consensus 124 --------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 192 (333)
T 2i1m_A 124 --------PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192 (333)
T ss_dssp --------SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSG
T ss_pred --------ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCccc
Confidence 6799999999999999987532 123478999999999999999999997 899999999
Q ss_pred CceEEcCCCcEEEecCCCCccccccccc---ccC-----CCCCC--cccCCCCCCCEeehhHHHHHHhc-CCCccccCcc
Q 004232 622 NNILLNEHRIAKLSDYGLSIVSEDINSV---GGK-----QEDPN--SWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQ 690 (766)
Q Consensus 622 ~NILld~~~~~kl~DFGla~~~~~~~~~---~~~-----~~~~~--~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~ 690 (766)
+||+++.++.+||+|||++......... ... ...|. ....++.++|||||||++|||+| |..|+.....
T Consensus 193 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp GGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred ceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 9999999999999999999654322111 000 00111 11345667899999999999999 8888864322
Q ss_pred chHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 691 FLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
.. .......... ....+. ..+ ..+.+++.+||+.||.+|||+.||++.|+++.+.
T Consensus 273 ~~--~~~~~~~~~~--~~~~~~---~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 273 NS--KFYKLVKDGY--QMAQPA---FAP----KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp SH--HHHHHHHHTC--CCCCCT---TCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hH--HHHHHHhcCC--CCCCCC---CCC----HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 11 1111111110 111111 111 2367899999999999999999999999988753
No 132
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.3e-35 Score=315.49 Aligned_cols=240 Identities=22% Similarity=0.374 Sum_probs=174.0
Q ss_pred hcCCCcCCceecCCceeEEEEEe----cCCceEEEEEccCCh----hhhHHHHHHHHHHHHhCCCCCcccccceeecCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~ 553 (766)
.++|++.+.||+|+||.||+++. .+|+.||||+++... ......+.+|+.++++++||||+++++++.+.+
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 94 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG- 94 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC-
Confidence 35788999999999999999986 478999999997642 233456888999999999999999999998753
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 95 -------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 95 -------KLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp -------CEEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred -------EEEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 6899999999999999997643 378889999999999999999997 899999999999999999999
Q ss_pred EecCCCCccccccccc----ccCCC--CC--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 634 LSDYGLSIVSEDINSV----GGKQE--DP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 634 l~DFGla~~~~~~~~~----~~~~~--~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|+|||+++........ .++.. .| .....++.++|||||||++|||++|+.||..... ......+....
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~-- 237 (327)
T 3a62_A 162 LTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDKILKCK-- 237 (327)
T ss_dssp ECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHTC--
T ss_pred EEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCC--
Confidence 9999998653221110 01110 01 1123456688999999999999999999874332 12222221111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
..+ | ...+ ..+.+++.+||+.||.+|| ++.|+++
T Consensus 238 ~~~--p---~~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 238 LNL--P---PYLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCC--C---TTSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCC--C---CCCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111 1 1111 2367899999999999999 6667754
No 133
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-35 Score=311.56 Aligned_cols=245 Identities=16% Similarity=0.278 Sum_probs=179.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
+.|.+.+.||+|+||.||+|+. .++..||+|++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-------- 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-------- 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS--------
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC--------
Confidence 4588889999999999999986 468999999986543 234678999999999999999999999998653
Q ss_pred eEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc---CCCcEEEec
Q 004232 561 KVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN---EHRIAKLSD 636 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~D 636 (766)
..++||||+++|+|.+++.... ....+++..+..++.+++.||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 7899999999999999885431 124589999999999999999999997 899999999999994 567899999
Q ss_pred CCCCcccccccccccCCC-----CCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 637 YGLSIVSEDINSVGGKQE-----DPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 637 FGla~~~~~~~~~~~~~~-----~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
||++.............. .|.. ...++.++|||||||++|||++|+.||......... ............ .
T Consensus 171 fg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~--~~~~~~~~~~~~-~ 247 (285)
T 3is5_A 171 FGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ--QKATYKEPNYAV-E 247 (285)
T ss_dssp CCCCCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH--HHHHHCCCCCCC--
T ss_pred eecceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHH--hhhccCCccccc-c
Confidence 999965432211110000 0100 123456789999999999999999998743322111 111111100000 0
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+ ..+.+++.+||+.||.+|||+.||++
T Consensus 248 ---~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 248 ---CRPLT----PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---cCcCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00111 23678999999999999999999975
No 134
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-35 Score=320.96 Aligned_cols=241 Identities=21% Similarity=0.313 Sum_probs=182.3
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~ 554 (766)
...++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+..|..++.++ +||||+++++++.+.+
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~-- 91 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE-- 91 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS--
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC--
Confidence 34678999999999999999999964 68999999997542 23356678899999877 9999999999998753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++++||
T Consensus 92 ------~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 92 ------NLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp ------EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEE
T ss_pred ------EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEE
Confidence 7899999999999999997643 388999999999999999999997 8999999999999999999999
Q ss_pred ecCCCCccccccc----ccccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 635 SDYGLSIVSEDIN----SVGGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 635 ~DFGla~~~~~~~----~~~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
+|||+++...... ...++. ++......++.++|||||||++|||++|+.||..... ...+..+.... .
T Consensus 160 ~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~--~ 235 (345)
T 1xjd_A 160 ADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDN--P 235 (345)
T ss_dssp CCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--C
T ss_pred eEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCC--C
Confidence 9999997532111 111111 1101113356788999999999999999999874332 22222222111 1
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFE-DIL 747 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-ev~ 747 (766)
.+ | ...+ ..+.+++.+|++.||.+||++. ||.
T Consensus 236 ~~--p---~~~s----~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 236 FY--P---RWLE----KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC--C---TTSC----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC--C---cccC----HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 1 1111 2367899999999999999997 654
No 135
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=319.77 Aligned_cols=260 Identities=18% Similarity=0.312 Sum_probs=180.2
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHH--HHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLR--LDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e--~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+. +++.||||++..... +.+..| +..+..++||||+++++++...... ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~---~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTAD---GR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTT---SC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccC---CC
Confidence 46788899999999999999976 689999999865432 333334 4445568999999999866532211 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------CCCcccCCCCCCceEEcCCCcEE
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV------IPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrdlk~~NILld~~~~~k 633 (766)
...++||||+++|+|.+++.... .+|..+..++.|++.||+|||+.. .++|+||||||+|||++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 35799999999999999997543 589999999999999999999862 23899999999999999999999
Q ss_pred EecCCCCccccccccc-------------ccCC-CCCCcc---------cCCCCCCCEeehhHHHHHHhcCCCccccCcc
Q 004232 634 LSDYGLSIVSEDINSV-------------GGKQ-EDPNSW---------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQ 690 (766)
Q Consensus 634 l~DFGla~~~~~~~~~-------------~~~~-~~~~~~---------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~ 690 (766)
|+|||+++........ ++.. ..|... ..++.++|||||||++|||+||..|+.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 9999999654321100 0000 001000 1122367999999999999999776542211
Q ss_pred c------h---------HHHHhhhhccc-CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 004232 691 F------L---------QEELDSLNSQE-GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAA 754 (766)
Q Consensus 691 ~------~---------~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~ 754 (766)
. . ........... ....+.+. . .........+.+++.+||+.||.+|||++||++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--W-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--C-CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--c-ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 0 0 00111111111 11111110 0 111234456889999999999999999999999999987
Q ss_pred h
Q 004232 755 Q 755 (766)
Q Consensus 755 ~ 755 (766)
.
T Consensus 318 ~ 318 (336)
T 3g2f_A 318 M 318 (336)
T ss_dssp H
T ss_pred H
Confidence 4
No 136
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.8e-35 Score=307.50 Aligned_cols=244 Identities=20% Similarity=0.302 Sum_probs=180.8
Q ss_pred CCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 484 NFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
+|....+||+|+||.||+|+. .+++.||||.+........+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--------~~ 94 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG--------FI 94 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT--------EE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC--------cE
Confidence 345556899999999999995 568899999998766556678999999999999999999999998753 68
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-CCcEEEecCCCCc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-HRIAKLSDYGLSI 641 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-~~~~kl~DFGla~ 641 (766)
++||||+++|+|.+++........+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|||++.
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 95 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 99999999999999998654444567888899999999999999997 8999999999999997 8999999999986
Q ss_pred ccccccccc----cCC--CCCCcc----cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 642 VSEDINSVG----GKQ--EDPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 642 ~~~~~~~~~----~~~--~~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
......... ++. ..|... ..++.++|||||||++|||+||+.||............ ...... .+
T Consensus 172 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~-----~~ 245 (295)
T 2clq_A 172 RLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK-VGMFKV-----HP 245 (295)
T ss_dssp ESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH-HHHHCC-----CC
T ss_pred ccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh-hccccc-----cc
Confidence 543221110 000 011100 12456789999999999999999998643222111111 100010 11
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
......+ ..+.+++.+||+.||.+||++.|+++
T Consensus 246 ~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 246 EIPESMS----AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111112 23678899999999999999999975
No 137
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.3e-36 Score=323.18 Aligned_cols=257 Identities=14% Similarity=0.116 Sum_probs=179.5
Q ss_pred cCCCcCCceecCCceeEEEEEec----CCceEEEEEccCChhh-----------hHHHHHHHHHHHHhCCCCCcccccce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSKKY-----------TVRNLKLRLDLLAKLRHPHLVCLLGH 547 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~~~~e~~~l~~l~Hpniv~l~g~ 547 (766)
++|.+.+.||+|+||.||+|+.. ++..||||+....... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999964 5788999998754321 12346678889999999999999999
Q ss_pred eecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc
Q 004232 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (766)
Q Consensus 548 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 627 (766)
+.+... .....++||||+ +|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 117 ~~~~~~----~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEFK----GRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEESS----SCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccC----CCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEc
Confidence 887321 013689999999 999999997653 589999999999999999999997 899999999999999
Q ss_pred CCC--cEEEecCCCCccccccccc--------ccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCcc
Q 004232 628 EHR--IAKLSDYGLSIVSEDINSV--------GGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ 690 (766)
Q Consensus 628 ~~~--~~kl~DFGla~~~~~~~~~--------~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~ 690 (766)
.++ .+||+|||+++........ ......+. ....++.++|||||||++|||+||+.||.....
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 265 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK 265 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT
T ss_pred cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 877 9999999999654322110 00000110 112345688999999999999999999964221
Q ss_pred chHHH--HhhhhcccCcccccccccc-CCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 691 FLQEE--LDSLNSQEGRQRLVDPVVM-ATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 691 ~~~~~--~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..... ...... ............ ... ...+.+++.+||+.||.+||++.||++.|+.+..
T Consensus 266 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 266 DPVAVQTAKTNLL-DELPQSVLKWAPSGSS----CCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp CHHHHHHHHHHHH-HTTTHHHHHHSCTTSC----CHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred ccHHHHHHHHhhc-ccccHHHHhhcccccc----HHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 11111 110000 011111100000 011 1247789999999999999999999999987654
No 138
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.2e-36 Score=318.36 Aligned_cols=254 Identities=16% Similarity=0.231 Sum_probs=183.3
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~--- 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA--- 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT---
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC---
Confidence 35788999999999999999995 578999999997542 33456789999999999999999999998764311
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
....++||||+++|+|.++++... .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 -~~~~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 88 -GPLPYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp -EEEEEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred -CcccEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 124599999999999999997653 488999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc--------cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 638 GLSIVSEDINSV--------GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 638 Gla~~~~~~~~~--------~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|++......... +. ..++......++.++|||||||++|||+||+.||....... ............
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~ 238 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS--VAYQHVREDPIP 238 (311)
T ss_dssp SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHCCCCC
T ss_pred cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCCC
Confidence 999654322110 00 00000111234567899999999999999999987433221 111111111100
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH-HHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW-NLQYAA 754 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~-~L~~~~ 754 (766)
........+ ..+.+++.+||+.||.+||+..++++ .+....
T Consensus 239 ---~~~~~~~~~----~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 239 ---PSARHEGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp ---HHHHSTTCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred ---cccccCCCC----HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 000011111 23678899999999999997777664 455544
No 139
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.5e-35 Score=310.04 Aligned_cols=251 Identities=18% Similarity=0.234 Sum_probs=179.1
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------- 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK------- 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-------
Confidence 46888999999999999999864 68999999986532 334577889999999999999999999998763
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 75 -~~~lv~e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 75 -KLTLVFEFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp -EEEEEEECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -EEEEEEecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 78999999986 5555554432 3489999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccccc----CC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---ccCc--
Q 004232 640 SIVSEDINSVGG----KQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS---QEGR-- 705 (766)
Q Consensus 640 a~~~~~~~~~~~----~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~---~~~~-- 705 (766)
++.......... +. ..|. ....++.++|||||||++|||+||..|+...... ......+.. ....
T Consensus 148 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~-~~~~~~i~~~~~~~~~~~ 226 (292)
T 3o0g_A 148 ARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEEQ 226 (292)
T ss_dssp CEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH-HHHHHHHHHHHCCCCTTT
T ss_pred ceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhh
Confidence 975432211110 00 0111 1122567889999999999999998885432221 111111110 0000
Q ss_pred ----cccccc----c-----ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 ----QRLVDP----V-----VMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ----~~~~d~----~-----~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
....+. . ............+.+++.+|++.||.+|||++|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000000 0 000000011234678999999999999999999875
No 140
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.1e-35 Score=317.82 Aligned_cols=236 Identities=20% Similarity=0.329 Sum_probs=177.8
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC---hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
++|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|+.+++++ +|||||++++++.+.+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC-----
Confidence 56888999999999999999965 6899999999754 234456788999999988 8999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+|+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 84 ---~~~lv~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 84 ---RLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp ---EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCG
T ss_pred ---EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEec
Confidence 7899999999999999997643 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccc-c---ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc------hHHH-Hhhhhcc
Q 004232 638 GLSIVSEDINS-V---GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF------LQEE-LDSLNSQ 702 (766)
Q Consensus 638 Gla~~~~~~~~-~---~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~------~~~~-~~~~~~~ 702 (766)
|+++....... . .++. ++......++.++|||||||++|||++|+.||...+.. .... ...+...
T Consensus 155 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~ 234 (345)
T 3a8x_A 155 GMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK 234 (345)
T ss_dssp GGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC
T ss_pred cccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC
Confidence 99975321111 0 0111 11011134566889999999999999999998632110 0111 1111110
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
...+ | ...+ ..+.+++.+||+.||.+||++
T Consensus 235 --~~~~--p---~~~s----~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 235 --QIRI--P---RSLS----VKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --CCCC--C---TTSC----HHHHHHHHHHTCSSTTTSTTC
T ss_pred --CCCC--C---CCCC----HHHHHHHHHHhcCCHhHCCCC
Confidence 1111 1 1111 236789999999999999996
No 141
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.4e-35 Score=323.37 Aligned_cols=194 Identities=20% Similarity=0.275 Sum_probs=158.3
Q ss_pred hcCCCcCCceecC--CceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEG--SYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+| +||.||+|+.. +|+.||||+++... ....+.+.+|+.++++++|||||++++++.+.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 99 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN---- 99 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC----
Confidence 3568899999999 99999999965 79999999996543 344677889999999999999999999998764
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 100 ----~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 100 ----ELWVVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred ----EEEEEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 78999999999999999976532 3488999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccc------------cccC-CCCCCc--c--cCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 637 YGLSIVSEDINS------------VGGK-QEDPNS--W--EMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 637 FGla~~~~~~~~------------~~~~-~~~~~~--~--~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
||.+........ .++. ...|.. . ..++.++|||||||++|||++|+.||..
T Consensus 172 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 239 (389)
T 3gni_B 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 239 (389)
T ss_dssp GGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999754321110 0000 001111 1 2356688999999999999999999864
No 142
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-35 Score=318.27 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=186.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe------cCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL------ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
.++|++.+.||+|+||.||+|+. .++..||||.+... .....+++.+|+.++++++||||+++++++.+.+
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL-- 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS--
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC--
Confidence 46788999999999999999984 35778999999654 3445678899999999999999999999998753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC--
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-- 628 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-- 628 (766)
..++||||+++|+|.+++.+... ...+++..+..++.+++.||+|||+. +|+||||||+||+++.
T Consensus 107 ------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 107 ------PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp ------SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSS
T ss_pred ------CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCC
Confidence 57999999999999999976532 13488999999999999999999997 8999999999999994
Q ss_pred -CCcEEEecCCCCccccccccc---c-------cCCCCCCcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHH
Q 004232 629 -HRIAKLSDYGLSIVSEDINSV---G-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEEL 696 (766)
Q Consensus 629 -~~~~kl~DFGla~~~~~~~~~---~-------~~~~~~~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~ 696 (766)
+..+||+|||++......... . +..++......++.++|||||||++|||+| |+.|+...... ...
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~ 255 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVL 255 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHH
T ss_pred CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHH
Confidence 456999999998643221100 0 001110112345668899999999999999 88888643221 111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
..+.. ..... .....+ ..+.+++.+||+.||.+||++.||++.|+.+.+..
T Consensus 256 ~~~~~-~~~~~-----~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 256 EFVTS-GGRMD-----PPKNCP----GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHHT-TCCCC-----CCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHhc-CCCCC-----CCCCCC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 11111 11111 011111 23678999999999999999999999999887533
No 143
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.6e-35 Score=307.68 Aligned_cols=241 Identities=19% Similarity=0.353 Sum_probs=183.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 82 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT----- 82 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC-----
Confidence 567889999999999999999864 57899999986532 223567889999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ---~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Df 153 (279)
T 3fdn_A 83 ---RVYLILEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADF 153 (279)
T ss_dssp ---EEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSC
T ss_pred ---EEEEEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEec
Confidence 6899999999999999987653 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc--cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 638 GLSIVSEDINSVG--GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 638 Gla~~~~~~~~~~--~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
|++.......... ++ .++.......+.++|||||||++|||++|+.|+..... ......+.... ..+ |
T Consensus 154 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~--~~~--~ 227 (279)
T 3fdn_A 154 GWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETYKRISRVE--FTF--P 227 (279)
T ss_dssp CEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC--CCC--C
T ss_pred cccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--HHHHHHHHhCC--CCC--C
Confidence 9985433221110 11 11111123456689999999999999999999874332 22222221111 011 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ ..+.+++.+||+.||.+||+++||++.
T Consensus 228 ---~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 228 ---DFVT----EGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp ---TTSC----HHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred ---CcCC----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111 236789999999999999999999976
No 144
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.1e-35 Score=308.71 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=186.4
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC-----
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD----- 555 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~----- 555 (766)
..+|++.+.||+|+||.||+|+.. +++.||||.++... +.+.+|++++++++||||+++++++....-..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 356888999999999999999975 79999999997643 34678999999999999999999886411000
Q ss_pred ---CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcE
Q 004232 556 ---DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 556 ---~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
.......++||||+++|+|.+++.+.. ...+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 001135899999999999999997542 23588999999999999999999997 89999999999999999999
Q ss_pred EEecCCCCcccccccccccCCCC-----C--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 633 KLSDYGLSIVSEDINSVGGKQED-----P--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~~~~~~~-----~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+|||++............... | .....++.++|||||||++|||+||..|+.... .....+.. ...
T Consensus 162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~~-~~~ 236 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----KFFTDLRD-GII 236 (284)
T ss_dssp EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----HHHHHHHT-TCC
T ss_pred EECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----HHHHHhhc-ccc
Confidence 99999998665332111110011 1 111345678999999999999999988864211 11111111 111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
. ...+ ..+.+++.+||+.||.+||++.|+++.|+.+....
T Consensus 237 ~--------~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 237 S--------DIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp C--------TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred c--------ccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 1 1111 23668899999999999999999999999876433
No 145
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.3e-35 Score=314.19 Aligned_cols=258 Identities=17% Similarity=0.317 Sum_probs=188.7
Q ss_pred HHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHh--CCCCCcccccceeecCCCCCCc
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAK--LRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~--l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
...++|.+.+.||+|+||.||+|+. +|+.||||++... ..+.+.+|++++.. ++||||+++++++.+..+.
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~--- 111 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT--- 111 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS---
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc---
Confidence 3456799999999999999999987 5899999998643 34567788888887 7999999999999876421
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCceEEcCC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLH--------TGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrdlk~~NILld~~ 629 (766)
....++||||+++|+|.+++.+. .+++..+..++.+++.||+||| +. +|+||||||+||+++.+
T Consensus 112 -~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 112 -WTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp -CCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred -cceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 12689999999999999999754 3889999999999999999999 54 89999999999999999
Q ss_pred CcEEEecCCCCccccccccc-----c---cCC--CCCCccc--------CCCCCCCEeehhHHHHHHhcC----------
Q 004232 630 RIAKLSDYGLSIVSEDINSV-----G---GKQ--EDPNSWE--------MTKLEDDVFSFGFMLLESVAG---------- 681 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~-----~---~~~--~~~~~~~--------~~~~~~DV~SfGvil~ElltG---------- 681 (766)
+.+||+|||++......... . ++. ..|.... ..+.++|||||||++|||+||
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 99999999999654332110 0 000 0111000 011468999999999999999
Q ss_pred CCccccCcc--chHHHHhhhhcccCccccccccccCC-CCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhh
Q 004232 682 PSVAARKGQ--FLQEELDSLNSQEGRQRLVDPVVMAT-SSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQV 756 (766)
Q Consensus 682 ~~p~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~ 756 (766)
..|+..... .....+........ ..+..... ...+....+.+++.+||+.||.+|||+.||++.|+.+.+-
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccCccccCcCcccHHHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 566643211 11111111111111 11111110 1224556688999999999999999999999999998753
No 146
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.9e-36 Score=333.95 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=188.8
Q ss_pred HHHHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeec
Q 004232 475 LEELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (766)
Q Consensus 475 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~ 550 (766)
+.++...+++|++.++||+|+||+||+|+.. +++.||||+++.... ...+.+.+|+.++++++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 4555566789999999999999999999975 588999999865322 123348889999999999999999999987
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
.+ .+++|||||++|+|.+++.+.. ..+++.....++.+++.||+|||+. +|+||||||+|||++.++
T Consensus 146 ~~--------~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g 212 (437)
T 4aw2_A 146 DN--------NLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNG 212 (437)
T ss_dssp SS--------EEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTS
T ss_pred CC--------EEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCC
Confidence 63 7899999999999999997632 3489999999999999999999997 899999999999999999
Q ss_pred cEEEecCCCCccccccccc-----ccCC--CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHH
Q 004232 631 IAKLSDYGLSIVSEDINSV-----GGKQ--EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEEL 696 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~-----~~~~--~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~ 696 (766)
++||+|||+++........ .++. ..|.. ...++.++|||||||++|||+||+.||..... .+..
T Consensus 213 ~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~--~~~~ 290 (437)
T 4aw2_A 213 HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--VETY 290 (437)
T ss_dssp CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHH
T ss_pred CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh--hHHH
Confidence 9999999999654322111 1111 01111 12356689999999999999999999974332 2222
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCC--CCCHHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWS--RPSFEDILWN 749 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~ev~~~ 749 (766)
..+..... .+.-|......+ ..+.+++.+|++.+|.+ ||+++||++.
T Consensus 291 ~~i~~~~~--~~~~p~~~~~~s----~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 291 GKIMNHKE--RFQFPTQVTDVS----ENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHHTHHH--HCCCCSSCCCSC----HHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred Hhhhhccc--cccCCcccccCC----HHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 22211110 111111111122 23678889999888888 9999998753
No 147
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.6e-35 Score=318.89 Aligned_cols=240 Identities=17% Similarity=0.249 Sum_probs=184.9
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----- 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----
Confidence 367889999999999999999964 69999999986543 233567889999999999999999999988753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++.+||+||
T Consensus 115 ---~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 115 ---NLYMVMEYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred ---EEEEEEcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEccc
Confidence 7899999999999999998653 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc-ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 638 GLSIVSEDINSV-GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 638 Gla~~~~~~~~~-~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
|+++........ .++. ++......++.++|||||||++|||++|+.||..... ......+.... ..+ |
T Consensus 186 g~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~--~~~--p- 258 (350)
T 1rdq_E 186 GFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGK--VRF--P- 258 (350)
T ss_dssp TTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CCC--C-
T ss_pred ccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcCC--CCC--C-
Confidence 999765432211 1111 1111123456789999999999999999999874332 22222222111 111 1
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPS-----FEDILW 748 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~ev~~ 748 (766)
...+ ..+.+++.+||+.||.+||+ ++||.+
T Consensus 259 --~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 259 --SHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp --TTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred --CCCC----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1112 23678999999999999998 777764
No 148
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=320.24 Aligned_cols=241 Identities=18% Similarity=0.276 Sum_probs=180.2
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCC--CCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRH--PHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~H--pniv~l~g~~~~~~~~~~~~ 558 (766)
+.|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+.++++++| |||+++++++.+..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~------ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC------
Confidence 458889999999999999999888999999998643 34456789999999999987 99999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||| +.+|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 83 --~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 83 --YIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp --EEEEEEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred --EEEEEEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecc
Confidence 7899999 57889999998653 488999999999999999999997 899999999999997 5789999999
Q ss_pred CCcccccccc-------cccCCC-CCCc-------------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHh
Q 004232 639 LSIVSEDINS-------VGGKQE-DPNS-------------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELD 697 (766)
Q Consensus 639 la~~~~~~~~-------~~~~~~-~~~~-------------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~ 697 (766)
+++....... .++... .|.. ...++.++|||||||++|||++|+.||....... ....
T Consensus 153 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~ 231 (343)
T 3dbq_A 153 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SKLH 231 (343)
T ss_dssp SSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HHHH
T ss_pred cccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-HHHH
Confidence 9975432211 011110 1111 1334567899999999999999999986432211 1111
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+........+ + ...+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 232 ~~~~~~~~~~~--~---~~~~----~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 AIIDPNHEIEF--P---DIPE----KDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHCTTSCCCC--C---CCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhcCCcccCC--c---ccCC----HHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111111111 1 1111 236789999999999999999999865
No 149
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-35 Score=320.52 Aligned_cols=252 Identities=20% Similarity=0.262 Sum_probs=183.4
Q ss_pred HHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-----hhhHHHHHHHHHHHHhCCCCCcccccceeecC
Q 004232 478 LKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (766)
Q Consensus 478 l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~ 551 (766)
+....++|++.+.||+|+||.||+|+. .++..||||++.... ....+.+.+|++++++++||||++++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445567799999999999999999986 468899999986432 34467899999999999999999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCC-------------------------------------CCCCCHHHHHH
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTP-------------------------------------GKVLNWSERLA 594 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~-------------------------------------~~~l~~~~~~~ 594 (766)
+ ..++||||+++|+|.+++..... ...+++.....
T Consensus 101 ~--------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (345)
T 3hko_A 101 Q--------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172 (345)
T ss_dssp S--------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred C--------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 3 78999999999999998852100 11134566778
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC--cEEEecCCCCccccccccc--------ccCC--CCCCc----
Q 004232 595 VLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR--IAKLSDYGLSIVSEDINSV--------GGKQ--EDPNS---- 658 (766)
Q Consensus 595 i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~--~~kl~DFGla~~~~~~~~~--------~~~~--~~~~~---- 658 (766)
++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++........ .++. ..|..
T Consensus 173 i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 249 (345)
T 3hko_A 173 IMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249 (345)
T ss_dssp HHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCS
T ss_pred HHHHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccC
Confidence 999999999999997 899999999999998766 8999999999754321110 0000 11111
Q ss_pred ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCC
Q 004232 659 WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESW 738 (766)
Q Consensus 659 ~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~ 738 (766)
...++.++|||||||++|||++|+.||...... .....+.... .....+.. ...+ ..+.+++.+||+.||.
T Consensus 250 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~--~~~~~~~~-~~~~----~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 250 NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA--DTISQVLNKK--LCFENPNY-NVLS----PLARDLLSNLLNRNVD 320 (345)
T ss_dssp SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC--CCTTSGGG-GGSC----HHHHHHHHHHSCSCTT
T ss_pred CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHhcc--cccCCccc-ccCC----HHHHHHHHHHcCCChh
Confidence 134566899999999999999999998643321 1122221111 11111111 1111 2367899999999999
Q ss_pred CCCCHHHHHHH
Q 004232 739 SRPSFEDILWN 749 (766)
Q Consensus 739 ~RPs~~ev~~~ 749 (766)
+||++.|+++.
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999764
No 150
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=307.77 Aligned_cols=241 Identities=19% Similarity=0.305 Sum_probs=179.0
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN----- 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----
Confidence 45788999999999999999986 5799999999864322 22477899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 ---~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 85 ---YVYLVLEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp ---EEEEEEECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCC
T ss_pred ---eEEEEEecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEee
Confidence 7899999999999999997542 3589999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSV--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~--------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++......... ....++.......+.++|||||||++|||+||+.|+....... ....+.. ...
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~----~~~- 229 (278)
T 3cok_A 157 GLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN--TLNKVVL----ADY- 229 (278)
T ss_dssp TTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------CCS----SCC-
T ss_pred cceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH--HHHHHhh----ccc-
Confidence 998654321110 0111111122345668999999999999999999986432211 1111110 011
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
......+ ..+.+++.+||+.||.+||+++||++
T Consensus 230 --~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 230 --EMPSFLS----IEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp --CCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --CCccccC----HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1111112 23678999999999999999999976
No 151
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=7.4e-35 Score=311.95 Aligned_cols=244 Identities=20% Similarity=0.319 Sum_probs=185.1
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
+.|++.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 88 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT--- 88 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC---
Confidence 56888999999999999999864 689999999865422 13678999999999999999999999998753
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC----c
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR----I 631 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~ 631 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++ .
T Consensus 89 -----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~ 157 (321)
T 2a2a_A 89 -----DVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPH 157 (321)
T ss_dssp -----EEEEEECCCCSCBHHHHHHTCS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCC
T ss_pred -----EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCC
Confidence 7899999999999999997543 488999999999999999999997 899999999999999887 7
Q ss_pred EEEecCCCCcccccccccccC-------CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 632 AKLSDYGLSIVSEDINSVGGK-------QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~~~-------~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
+||+|||++............ .++......++.++|||||||++|||+||+.||..... ......+....
T Consensus 158 ~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~- 234 (321)
T 2a2a_A 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANITSVS- 234 (321)
T ss_dssp EEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHTTC-
T ss_pred EEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhcc-
Confidence 999999999765432211110 11111123456789999999999999999999864322 22222221110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. .++......+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 235 -~~-~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 -YD-FDEEFFSHTS----ELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp -CC-CCHHHHTTCC----HHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred -cc-cChhhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01 1111111112 236789999999999999999999863
No 152
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=3.5e-35 Score=313.54 Aligned_cols=246 Identities=18% Similarity=0.259 Sum_probs=179.9
Q ss_pred cCCCcC-CceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMS-AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+.|++. +.||+|+||.||+|+. .+++.||||++........+.+.+|++++.++ +||||+++++++.+.+
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~------- 84 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED------- 84 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-------
Confidence 457764 7899999999999984 47899999999766555567889999999985 7999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc---EEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---AKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~D 636 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 85 -~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 85 -RFYLVFEKMRGGSILSHIHKRR---HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp -EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred -EEEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEE
Confidence 7899999999999999997653 488999999999999999999997 8999999999999998765 99999
Q ss_pred CCCCccccccccc------------ccCC-CCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccch----
Q 004232 637 YGLSIVSEDINSV------------GGKQ-EDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL---- 692 (766)
Q Consensus 637 FGla~~~~~~~~~------------~~~~-~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~---- 692 (766)
||++......... +... ..|... ..++.++|||||||++|||+||+.||.......
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 237 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD 237 (316)
T ss_dssp TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-
T ss_pred ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccc
Confidence 9998654211100 0000 011100 224568999999999999999999986432110
Q ss_pred ---------HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 693 ---------QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 693 ---------~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+.. . ...+.++.. ... ...+.+++.+|++.||.+|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~i~~-~-~~~~~~~~~-~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 238 RGEACPACQNMLFESIQE-G-KYEFPDKDW-AHI----SCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp ---CCHHHHHHHHHHHHH-C-CCCCCHHHH-TTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccchhHHHHHHHHHhc-c-CcccCchhc-ccC----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 001111111 0 111111100 011 1247789999999999999999999864
No 153
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.6e-34 Score=324.60 Aligned_cols=255 Identities=18% Similarity=0.205 Sum_probs=181.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||+||+|+. .+|+.||||++... .....+++.+|+.+|+.++|||||++++++....... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~--~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE--E 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT--T
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc--c
Confidence 46789999999999999999985 46899999999754 3345678889999999999999999999997653211 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
...+|+||||++++ +.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCCC-HHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 24689999999875 5555542 278999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccccc---cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc---c-----
Q 004232 639 LSIVSEDINSVG---GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ---E----- 703 (766)
Q Consensus 639 la~~~~~~~~~~---~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~---~----- 703 (766)
+++......... ++ .++......++.++||||+||++|||++|+.||..... .+.+..+... .
T Consensus 210 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~--~~~~~~i~~~lg~p~~~~~ 287 (464)
T 3ttj_A 210 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY--IDQWNKVIEQLGTPCPEFM 287 (464)
T ss_dssp CC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCSCCHHHH
T ss_pred eeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHH
Confidence 997654321111 11 11111123466789999999999999999999974332 1111111100 0
Q ss_pred ---------------Ccc-----ccccccccCCCC---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 ---------------GRQ-----RLVDPVVMATSS---LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 ---------------~~~-----~~~d~~~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ..+......... ......+.+|+.+|++.||.+|||++|+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 000000000011 1113458899999999999999999999864
No 154
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.8e-35 Score=312.41 Aligned_cols=256 Identities=16% Similarity=0.222 Sum_probs=184.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..++|++.+.||+|+||.||+|+. .+++.||||.+..... .+.+.+|+.++++++|++++..+++|...+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~------- 77 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG------- 77 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEET-------
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCC-------
Confidence 347799999999999999999985 5789999998754332 235788999999999999999888876543
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE---cCCCcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~D 636 (766)
...++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred CceEEEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 3689999999 999999987543 3489999999999999999999997 89999999999999 7889999999
Q ss_pred CCCCcccccccccc--------cCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhh
Q 004232 637 YGLSIVSEDINSVG--------GKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLN 700 (766)
Q Consensus 637 FGla~~~~~~~~~~--------~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~ 700 (766)
||+++......... .....+. ....++.++|||||||++|||+||+.||...... ....+..+.
T Consensus 152 fg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 231 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS 231 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred CccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhh
Confidence 99997643321100 0000000 1123455789999999999999999998642211 000011110
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
... .....+......+ ..+.+++.+||+.||++||+++||++.|+.+.+..
T Consensus 232 ~~~--~~~~~~~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 232 EKK--MSTPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHH--HHSCHHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred ccc--ccchhhhhhccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 000 0000000001111 24778999999999999999999999999887644
No 155
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.2e-34 Score=304.34 Aligned_cols=250 Identities=20% Similarity=0.326 Sum_probs=186.5
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh------hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
++|++.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT--- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS---
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC---
Confidence 45888999999999999999975 689999999865321 23678999999999999999999999998753
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC----c
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR----I 631 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~----~ 631 (766)
..++||||+++++|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++ .
T Consensus 82 -----~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 82 -----DVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCC
T ss_pred -----eEEEEEeecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCc
Confidence 6899999999999999997643 489999999999999999999997 899999999999999876 8
Q ss_pred EEEecCCCCcccccccccc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 632 AKLSDYGLSIVSEDINSVG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
+||+|||++.......... ...++......++.++||||||+++|||++|+.|+..... ......+....
T Consensus 151 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~- 227 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--QETLTNISAVN- 227 (283)
T ss_dssp EEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTTC-
T ss_pred eEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--HHHHHHhHhcc-
Confidence 9999999986543321111 0111111123456689999999999999999999864332 11122111110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH--HHHHHh
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN--LQYAAQ 755 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~--L~~~~~ 755 (766)
.. .++......+ ..+.+++.+||+.||.+||++.|+++. ++.+..
T Consensus 228 -~~-~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 228 -YD-FDEEYFSNTS----ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp -CC-CCHHHHTTCC----HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred -cC-CcchhcccCC----HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 00 0111111111 236789999999999999999999974 555543
No 156
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.4e-35 Score=322.91 Aligned_cols=202 Identities=21% Similarity=0.301 Sum_probs=162.1
Q ss_pred cCHHHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-----CCCcccccc
Q 004232 473 FTLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-----HPHLVCLLG 546 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-----Hpniv~l~g 546 (766)
+++++.....++|++.+.||+|+||.||+|+. .+++.||||+++... ...+.+..|+.++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 44444444568899999999999999999996 478999999997543 34566788999999986 999999999
Q ss_pred eeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 547 HCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 547 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
++...+ ..++||||+ +|+|.+++..... ..+++.....++.|++.||+|||+. +|+||||||+|||+
T Consensus 104 ~~~~~~--------~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 170 (360)
T 3llt_A 104 KFMYYD--------HMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILL 170 (360)
T ss_dssp EEEETT--------EEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred eeeECC--------eeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEE
Confidence 998763 789999999 9999999976542 3488999999999999999999997 89999999999999
Q ss_pred cC-------------------------CCcEEEecCCCCccccccccc-cc----CCCCCCcccCCCCCCCEeehhHHHH
Q 004232 627 NE-------------------------HRIAKLSDYGLSIVSEDINSV-GG----KQEDPNSWEMTKLEDDVFSFGFMLL 676 (766)
Q Consensus 627 d~-------------------------~~~~kl~DFGla~~~~~~~~~-~~----~~~~~~~~~~~~~~~DV~SfGvil~ 676 (766)
+. ++.+||+|||++......... .+ ..++......++.++|||||||++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 250 (360)
T 3llt_A 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250 (360)
T ss_dssp SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHH
Confidence 75 789999999999764332211 11 1111111234677899999999999
Q ss_pred HHhcCCCccccC
Q 004232 677 ESVAGPSVAARK 688 (766)
Q Consensus 677 ElltG~~p~~~~ 688 (766)
||+||+.||...
T Consensus 251 ell~g~~pf~~~ 262 (360)
T 3llt_A 251 ELYTGSLLFRTH 262 (360)
T ss_dssp HHHHSSCSCCCS
T ss_pred HHHHCCCCCCCC
Confidence 999999998743
No 157
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1e-34 Score=304.97 Aligned_cols=245 Identities=18% Similarity=0.294 Sum_probs=184.9
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES------ 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC------
Confidence 467899999999999999999864 68999999986542 344577889999999999999999999998653
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc---EEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---AKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~ 635 (766)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+
T Consensus 79 --~~~~v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 79 --FHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred --EEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 6899999999999998887653 488999999999999999999997 8999999999999986654 9999
Q ss_pred cCCCCcccccccccccCCCC-----C--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 636 DYGLSIVSEDINSVGGKQED-----P--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 636 DFGla~~~~~~~~~~~~~~~-----~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
|||++............... | .....++.++|||||||++|||++|+.||...... .....+... ....
T Consensus 151 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~--~~~~ 226 (284)
T 3kk8_A 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAG--AYDY 226 (284)
T ss_dssp CCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT--CCCC
T ss_pred eceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhc--cccC
Confidence 99999655432221111111 1 11123466889999999999999999998643322 111111111 1111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.. ...+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 227 ~~~~~-~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 227 PSPEW-DTVT----PEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CTTTT-TTSC----HHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred Cchhh-cccC----HHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 11111 1111 236789999999999999999999874
No 158
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.5e-35 Score=311.49 Aligned_cols=256 Identities=16% Similarity=0.221 Sum_probs=187.6
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .+++.+|+.++++++|++++..++++...+ .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~-------~ 78 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEG-------D 78 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEET-------T
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCC-------C
Confidence 46789999999999999999995 6799999999865432 246889999999999999888888776543 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE---cCCCcEEEecC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DF 637 (766)
..++||||+ +|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 79 YNVMVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 689999999 999999997543 3489999999999999999999997 89999999999999 57889999999
Q ss_pred CCCcccccccccc--------cCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhc
Q 004232 638 GLSIVSEDINSVG--------GKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNS 701 (766)
Q Consensus 638 Gla~~~~~~~~~~--------~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~ 701 (766)
|++.......... .....+. ....++.++|||||||++|||+||+.||...... ....+..+..
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 232 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 232 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHH
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcc
Confidence 9997644322110 0000110 1123455789999999999999999998742211 0000111100
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhcc
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQE 758 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~~ 758 (766)
.. .....+......+ ..+.+++.+||+.||.+||++.||++.|+++.+...
T Consensus 233 ~~--~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 233 KK--MSTPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HH--HHSCHHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cc--cCCchHHHHhhCC----HHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00 0000000111111 237789999999999999999999999999876543
No 159
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.5e-35 Score=324.56 Aligned_cols=244 Identities=22% Similarity=0.346 Sum_probs=178.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh--------hhHHHHHHHHHHHHhCCCCCcccccceeecC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~ 551 (766)
..++|.+.+.||+|+||.||+|.. .+++.||||++..... .....+.+|+++|++++|||||++++++...
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 457899999999999999999985 4689999999865321 1223588999999999999999999998543
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC--
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-- 629 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-- 629 (766)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.+
T Consensus 213 ---------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 213 ---------DYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp ---------EEEEEEECCTTCBGGGGTSSSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSS
T ss_pred ---------ceEEEEEcCCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCC
Confidence 5799999999999999887543 489999999999999999999997 89999999999999754
Q ss_pred -CcEEEecCCCCcccccccccc---cCC--CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCcc--chHHHH
Q 004232 630 -RIAKLSDYGLSIVSEDINSVG---GKQ--EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ--FLQEEL 696 (766)
Q Consensus 630 -~~~kl~DFGla~~~~~~~~~~---~~~--~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~--~~~~~~ 696 (766)
+.+||+|||+++......... ++. ..|.. ...++.++|||||||++|||+||+.||..... .....+
T Consensus 278 ~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i 357 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357 (419)
T ss_dssp SCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHH
T ss_pred cceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHH
Confidence 459999999997654322111 110 11111 12234478999999999999999999864321 111111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. . ..... +......+ ..+.+++.+|++.||.+||++.|+++.
T Consensus 358 ~~----~-~~~~~-~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 TS----G-KYNFI-PEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HT----T-CCCCC-HHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hc----C-CCCCC-chhhcccC----HHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 11 1 00110 11111111 237789999999999999999999863
No 160
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-35 Score=330.51 Aligned_cols=240 Identities=19% Similarity=0.267 Sum_probs=175.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+.++++++||||++++++|.+.+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~----- 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD----- 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----
Confidence 46799999999999999999985 46899999998753 2233466788999999999999999999998764
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++|+|.+++.+.. .+++.....++.|++.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 222 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 ---RLCFVMEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp ---EEEEEECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred ---EEEEEEeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 7899999999999999997653 48899999999999999999997 6 899999999999999999999999
Q ss_pred CCCCccccccccc-c---cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSV-G---GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~-~---~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||+++........ . ++ .++......++.++|||||||++|||++|+.||...... .....+.... ..+
T Consensus 293 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~--~~~ 368 (446)
T 4ejn_A 293 FGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEE--IRF 368 (446)
T ss_dssp CCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC--CCC
T ss_pred CCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCC--CCC
Confidence 9999753221111 0 11 111111234567899999999999999999999643321 1122221111 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
| ...+ ..+.+++.+||+.||.+|| +++|+++
T Consensus 369 --p---~~~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 --P---RTLG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp --C---TTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred --C---ccCC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1 1111 2367899999999999999 9999875
No 161
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.2e-34 Score=307.67 Aligned_cols=244 Identities=18% Similarity=0.293 Sum_probs=183.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
++|.+.+.||+|+||.||+|+.. +|+.||||+++.......+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------~ 80 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT--------H 80 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS--------E
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC--------E
Confidence 56888999999999999999864 78999999998665555677899999999999999999999988753 7
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE---cCCCcEEEecCC
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDYG 638 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DFG 638 (766)
.++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg 154 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFG 154 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred EEEEEEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCC
Confidence 899999999999999987643 388999999999999999999997 89999999999999 778999999999
Q ss_pred CCcccccccc------cccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccccc
Q 004232 639 LSIVSEDINS------VGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPV 712 (766)
Q Consensus 639 la~~~~~~~~------~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 712 (766)
++........ .....++......++.++|||||||++|||++|+.||..... ......+... ......+
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~--~~~~~~~- 229 (304)
T 2jam_A 155 LSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIKEG--YYEFESP- 229 (304)
T ss_dssp TTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHC--CCCCCTT-
T ss_pred cceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcC--CCCCCcc-
Confidence 9865432211 111112222223345678999999999999999999864332 1111222111 1111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 713 VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 713 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+ ..+.+++.+|++.||.+||++.|+++.
T Consensus 230 ~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 230 FWDDIS----ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp TTTTSC----HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCC----HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111112 236789999999999999999999863
No 162
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.8e-36 Score=328.81 Aligned_cols=253 Identities=18% Similarity=0.260 Sum_probs=187.1
Q ss_pred CHHHHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceee
Q 004232 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCI 549 (766)
Q Consensus 474 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~ 549 (766)
.++++....++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|..++.+++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555556789999999999999999999974 79999999996532 222345888999999999999999999998
Q ss_pred cCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 550 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
+.+ .+|+||||+++|+|.+++.+.. ..+++.....++.+|+.||+|||+. +|+||||||+|||+|.+
T Consensus 132 ~~~--------~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 132 DEN--------YLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRC 198 (412)
T ss_dssp CSS--------EEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred eCC--------EEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCC
Confidence 753 7899999999999999997643 2488999999999999999999997 89999999999999999
Q ss_pred CcEEEecCCCCccccccccc-----ccCCC--CCCc---------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchH
Q 004232 630 RIAKLSDYGLSIVSEDINSV-----GGKQE--DPNS---------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ 693 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~-----~~~~~--~~~~---------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~ 693 (766)
+++||+|||+++........ .++.. .|.. ...++.++|||||||++|||+||+.||..... .
T Consensus 199 g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~ 276 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST--A 276 (412)
T ss_dssp SCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--H
T ss_pred CCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH--H
Confidence 99999999999764332111 11110 1110 12356788999999999999999999974332 2
Q ss_pred HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCC---CCHHHHHH
Q 004232 694 EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSR---PSFEDILW 748 (766)
Q Consensus 694 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~R---Ps~~ev~~ 748 (766)
.....+..... ...-|......+ ..+.+++.+|++ +|.+| |+++||.+
T Consensus 277 ~~~~~i~~~~~--~~~~p~~~~~~s----~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 277 ETYGKIVHYKE--HLSLPLVDEGVP----EEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHHTHHH--HCCCC----CCC----HHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHHhccc--CcCCCccccCCC----HHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 22222221110 001111111112 236789999999 99998 58888754
No 163
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.3e-34 Score=305.24 Aligned_cols=246 Identities=23% Similarity=0.306 Sum_probs=182.2
Q ss_pred CCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
|.+.+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|+.++++++||||+++++++...... ...
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~----~~~ 103 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG----KKC 103 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSS----CEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCC----Cce
Confidence 66778899999999999986 46889999998653 344567899999999999999999999998764211 136
Q ss_pred EEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CCCcEEEecCCCC
Q 004232 562 VFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLS 640 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DFGla 640 (766)
.++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+.. ++|+||||||+||+++ .++.+||+|||++
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~ 179 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEEEEEecCCCCHHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence 899999999999999997643 3889999999999999999999972 2399999999999998 7899999999998
Q ss_pred cccccccccc--cCC--CCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccC
Q 004232 641 IVSEDINSVG--GKQ--EDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMA 715 (766)
Q Consensus 641 ~~~~~~~~~~--~~~--~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 715 (766)
.......... ++. ..|. ....++.++|||||||++|||+||+.||...... ......+.... .....+ .
T Consensus 180 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~----~ 253 (290)
T 1t4h_A 180 TLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRVTSGV-KPASFD----K 253 (290)
T ss_dssp GGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHHTTTC-CCGGGG----G
T ss_pred ccccccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH-HHHHHHHhccC-CccccC----C
Confidence 6543221111 110 0111 1134567889999999999999999998643221 11112111111 111111 1
Q ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 716 TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 716 ~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... ..+.+++.+||+.||.+|||+.||++
T Consensus 254 ~~~----~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 254 VAI----PEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CCC----HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC----HHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111 23778999999999999999999975
No 164
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-34 Score=315.71 Aligned_cols=249 Identities=21% Similarity=0.321 Sum_probs=186.9
Q ss_pred HHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--------hhhHHHHHHHHHHHHhC-CCCCcccccc
Q 004232 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKL-RHPHLVCLLG 546 (766)
Q Consensus 477 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~~e~~~l~~l-~Hpniv~l~g 546 (766)
......++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34445677999999999999999999975 79999999986432 12245688999999999 7999999999
Q ss_pred eeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 547 HCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 547 ~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
++...+ ..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 168 ~~~~~~--------~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~ 233 (365)
T 2y7j_A 168 SYESSS--------FMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILL 233 (365)
T ss_dssp EEEBSS--------EEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEeeCC--------EEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 988753 7899999999999999987543 488999999999999999999997 89999999999999
Q ss_pred cCCCcEEEecCCCCcccccccccccCCC-----CCCc--------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchH
Q 004232 627 NEHRIAKLSDYGLSIVSEDINSVGGKQE-----DPNS--------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ 693 (766)
Q Consensus 627 d~~~~~kl~DFGla~~~~~~~~~~~~~~-----~~~~--------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~ 693 (766)
+.++.+||+|||++.............. .|.. ...++.++|||||||++|||+||+.||......
T Consensus 234 ~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-- 311 (365)
T 2y7j_A 234 DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-- 311 (365)
T ss_dssp CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--
T ss_pred CCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--
Confidence 9999999999999865433221111100 1110 113566899999999999999999998643321
Q ss_pred HHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 694 EELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 694 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.....+... ......+.. ...+ ..+.+++.+|++.||.+||++.|+++
T Consensus 312 ~~~~~i~~~--~~~~~~~~~-~~~~----~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 LMLRMIMEG--QYQFSSPEW-DDRS----STVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHHT--CCCCCHHHH-SSSC----HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHhC--CCCCCCccc-ccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 111111111 1111 23678999999999999999999975
No 165
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-35 Score=310.61 Aligned_cols=253 Identities=21% Similarity=0.300 Sum_probs=184.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------- 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR------- 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-------
Confidence 57888999999999999999965 58999999886543 334567889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++++|..++.... .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 -~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 76 -RLHLVFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp -EEEEEEECCSEEHHHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -eEEEEEEeCCCchHHHHHhhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 6899999999999998876543 388999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc-----ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHH-HHhhhhc--------
Q 004232 640 SIVSEDINSV-----GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQE-ELDSLNS-------- 701 (766)
Q Consensus 640 a~~~~~~~~~-----~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~-~~~~~~~-------- 701 (766)
+......... +... ..|. ....++.++|||||||++|||+||+.|+......... .+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (311)
T 4agu_A 149 ARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 228 (311)
T ss_dssp CEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred chhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccc
Confidence 9654322111 1000 1111 1134567899999999999999999998754322111 1111000
Q ss_pred ----cc--CccccccccccCCCC---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 ----QE--GRQRLVDPVVMATSS---LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 ----~~--~~~~~~d~~~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ....+.++....... ......+.+++.+||+.||.+|||++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 229 VFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 001111111000000 0112337789999999999999999999854
No 166
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=8.3e-35 Score=315.06 Aligned_cols=236 Identities=18% Similarity=0.295 Sum_probs=179.2
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~ 555 (766)
..++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+..|..+++.+ +||||+++++++.+.+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~--- 94 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 94 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS---
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC---
Confidence 3578999999999999999999975 58899999997542 23356788899999988 8999999999988753
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
..|+||||+++|+|.+++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++++||+
T Consensus 95 -----~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 95 -----RLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred -----EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 7899999999999999997643 388999999999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccc-cc---ccCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 636 DYGLSIVSEDIN-SV---GGKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 636 DFGla~~~~~~~-~~---~~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|||+++...... .. .++. ++......++.++|||||||++|||++|+.||..... ......+.... ..
T Consensus 164 DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~--~~ 239 (353)
T 2i0e_A 164 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHN--VA 239 (353)
T ss_dssp CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC--CC
T ss_pred eCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCC--CC
Confidence 999997532111 11 1111 1101123456688999999999999999999874332 22222222111 11
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
+ | ...+ ..+.+++.+|++.||.+||++
T Consensus 240 ~--p---~~~s----~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 240 Y--P---KSMS----KEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp C--C---TTSC----HHHHHHHHHHTCSCTTSCTTC
T ss_pred C--C---CCCC----HHHHHHHHHHhhcCHHHcCCC
Confidence 1 1 1111 236789999999999999964
No 167
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5e-35 Score=321.71 Aligned_cols=241 Identities=17% Similarity=0.254 Sum_probs=179.7
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCC--CCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~--Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+++|++++ |||||++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~------ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ------ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC------
Confidence 458899999999999999999888999999998643 3445678999999999996 599999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
.+++||| +.+|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 130 --~~~lv~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 130 --YIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp --EEEEEEE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred --EEEEEEe-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecC
Confidence 6899999 67889999998653 478999999999999999999997 899999999999996 5899999999
Q ss_pred CCcccccccc------cccCC--CCCCc-------------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHh
Q 004232 639 LSIVSEDINS------VGGKQ--EDPNS-------------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELD 697 (766)
Q Consensus 639 la~~~~~~~~------~~~~~--~~~~~-------------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~ 697 (766)
+++....... ..++. ..|.. ...++.++|||||||++|||++|+.||...... ...+.
T Consensus 200 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~ 278 (390)
T 2zmd_A 200 IANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-ISKLH 278 (390)
T ss_dssp SSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHH
T ss_pred ccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-HHHHH
Confidence 9975432211 00110 01111 023556789999999999999999998643221 11222
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+........+ +. ..+ ..+.+++.+||+.||.+||++.||++.
T Consensus 279 ~~~~~~~~~~~--~~---~~~----~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNHEIEF--PD---IPE----KDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTSCCCC--CC---CSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccccCCC--Cc---cch----HHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 22111111111 11 111 236789999999999999999999865
No 168
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-35 Score=321.08 Aligned_cols=194 Identities=24% Similarity=0.430 Sum_probs=149.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~ 556 (766)
..++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++++. |||||++++++...+.
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~--- 83 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND--- 83 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS---
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC---
Confidence 457899999999999999999985 47999999998643 3445677889999999997 9999999999976532
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..+|+|||||+ |+|..++... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 84 ---~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~D 152 (388)
T 3oz6_A 84 ---RDVYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVAD 152 (388)
T ss_dssp ---SCEEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECC
T ss_pred ---CEEEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecC
Confidence 35899999998 5899988753 388999999999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccc--------------------------cccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccc
Q 004232 637 YGLSIVSEDINS--------------------------VGGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 637 FGla~~~~~~~~--------------------------~~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~ 686 (766)
||+++....... .++.. ..|. ....++.++|||||||++|||++|+.||.
T Consensus 153 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 999975422100 00000 0111 11345667899999999999999999997
Q ss_pred cC
Q 004232 687 RK 688 (766)
Q Consensus 687 ~~ 688 (766)
..
T Consensus 233 ~~ 234 (388)
T 3oz6_A 233 GS 234 (388)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 169
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=5.4e-35 Score=307.49 Aligned_cols=232 Identities=13% Similarity=0.108 Sum_probs=179.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+.|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~------ 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA------ 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT------
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC------
Confidence 56888999999999999999965 58999999997542 344578999999999999999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..|+||||+++|+|.+++.+. ....+...++.|++.||+|||+. +|+||||||+|||++.++.+||+++|
T Consensus 105 --~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 105 --GGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp --EEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred --cEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc
Confidence 689999999999999998542 34556788999999999999997 89999999999999999999999765
Q ss_pred CCcccccccccccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc-cccCCC
Q 004232 639 LSIVSEDINSVGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP-VVMATS 717 (766)
Q Consensus 639 la~~~~~~~~~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~ 717 (766)
.. ...+.++|||||||++|||+||+.||........ +..... ........+ ......
T Consensus 175 ~~-------------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~ 232 (286)
T 3uqc_A 175 TM-------------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSG--LAPAER-DTAGQPIEPADIDRDI 232 (286)
T ss_dssp CC-------------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC--SEECCB-CTTSCBCCHHHHCTTS
T ss_pred cc-------------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh--hHHHHH-HhccCCCChhhcccCC
Confidence 42 1245688999999999999999999874322100 000000 000000000 011111
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 718 SLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 718 ~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
+ ..+.+++.+||+.||.+| |+.|++++|+.+....
T Consensus 233 ~----~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 233 P----FQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp C----HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred C----HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 1 237789999999999999 9999999999987543
No 170
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=305.07 Aligned_cols=261 Identities=20% Similarity=0.234 Sum_probs=180.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-----hhhHHHHHHHHHHHHhC---CCCCcccccceeecC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-----KYTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDG 551 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~e~~~l~~l---~Hpniv~l~g~~~~~ 551 (766)
..++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+++++++ +||||++++++|.+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999995 578999999986322 11134566777777666 499999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
.... ....++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 87 ~~~~---~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDR---EIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSS---EEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCC---ceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 4211 125799999998 599999876542 3489999999999999999999997 8999999999999999999
Q ss_pred EEEecCCCCccccccccccc---CC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc
Q 004232 632 AKLSDYGLSIVSEDINSVGG---KQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE 703 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~~~---~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~ 703 (766)
+||+|||+++.......... +. ++......++.++|||||||++|||+||+.||....... ...+.......
T Consensus 159 ~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 238 (308)
T 3g33_A 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLP 238 (308)
T ss_dssp EEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred EEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 99999999975432211111 11 111112345778999999999999999999987443211 11111111000
Q ss_pred Ccccc------cccccc--CCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 GRQRL------VDPVVM--ATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 ~~~~~------~d~~~~--~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+ ...... ..... +....+.+++.+|++.||.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000 000000 00000 112346789999999999999999999753
No 171
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.8e-35 Score=309.78 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=185.2
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+.. +|+.||+|.+... .....+.+.+|++++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----- 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN----- 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG-----
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC-----
Confidence 367888999999999999999864 6899999999754 23456789999999999999999999998865321
Q ss_pred cceEEEEEEccCCCChhhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCC--CCcccCCCCCCceEEcCCCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENT-PGKVLNWSERLAVLIGVAKAVQFLHTGVI--PGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~--~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
...++||||+++|+|.+++.... ....+++..+..++.+++.||+|||+... .+|+||||||+||+++.++.+||+
T Consensus 80 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~ 158 (279)
T 2w5a_A 80 -TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG 158 (279)
T ss_dssp -TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEEC
T ss_pred -ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEe
Confidence 36899999999999999987532 23348999999999999999999999720 129999999999999999999999
Q ss_pred cCCCCcccccccc-----ccc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 636 DYGLSIVSEDINS-----VGG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 636 DFGla~~~~~~~~-----~~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|||++........ .+. ..++......++.++|||||||++|||+||+.|+...... .....+.. .....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~-~~~~~ 235 (279)
T 2w5a_A 159 DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIRE-GKFRR 235 (279)
T ss_dssp CCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH-TCCCC
T ss_pred cCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhh-ccccc
Confidence 9999865432211 011 1111111123456789999999999999999998743321 11111111 11111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQY 752 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~ 752 (766)
+ ....+ ..+.+++.+||+.||.+||++.||++.+..
T Consensus 236 ~-----~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~~~~ 271 (279)
T 2w5a_A 236 I-----PYRYS----DELNEIITRMLNLKDYHRPSVEEILENPLI 271 (279)
T ss_dssp C-----CTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred C-----CcccC----HHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence 1 11112 236789999999999999999999876543
No 172
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4.8e-35 Score=322.86 Aligned_cols=248 Identities=17% Similarity=0.249 Sum_probs=176.6
Q ss_pred hcCCCcC-CceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHH-hCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMS-AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLA-KLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~-~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~-~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|.+. ++||+|+||+||+|+.. +|+.||||+++.. ..+.+|+.++. ..+||||+++++++..... .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~----~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYA----G 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----T
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeeccc----C
Confidence 3456665 68999999999999864 6899999998643 34667888764 4589999999998864210 0
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~ 635 (766)
...+|+||||+++|+|.+++.+.. ...+++..+..++.+|+.||+|||+. +|+||||||+|||++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 136899999999999999997643 23589999999999999999999997 8999999999999997 7899999
Q ss_pred cCCCCcccccccccc-------cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchH--HHHhhhhcccCcc
Q 004232 636 DYGLSIVSEDINSVG-------GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ--EELDSLNSQEGRQ 706 (766)
Q Consensus 636 DFGla~~~~~~~~~~-------~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~--~~~~~~~~~~~~~ 706 (766)
|||+++......... +..++......++.++|||||||++|||++|+.||........ .....+.. ...
T Consensus 207 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~--~~~ 284 (400)
T 1nxk_A 207 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM--GQY 284 (400)
T ss_dssp CCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH--TCC
T ss_pred ecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc--Ccc
Confidence 999997643321111 1111111223456688999999999999999999864321100 00011111 011
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+..+.. ...+ ..+.+++.+||+.||.+|||+.||++.
T Consensus 285 ~~~~~~~-~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 285 EFPNPEW-SEVS----EEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCCTTTT-TTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred cCCCccc-ccCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111111 1112 236789999999999999999999875
No 173
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.5e-35 Score=309.27 Aligned_cols=244 Identities=21% Similarity=0.351 Sum_probs=182.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.+.|++.+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++||||+++++++.+.+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------- 89 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-------- 89 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---------
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC--------
Confidence 467888999999999999999975 58999999997766566788999999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 6899999999999999887532 3488999999999999999999997 8999999999999999999999999987
Q ss_pred cccccc----cc-cccCC-CCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 641 IVSEDI----NS-VGGKQ-EDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 641 ~~~~~~----~~-~~~~~-~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
...... .. .+... ..|. ....++.++|||||||++|||+||+.|+..... ......+.... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~-~~~ 241 (302)
T 2j7t_A 165 AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKIAKSD-PPT 241 (302)
T ss_dssp HHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSC-CCC
T ss_pred ccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHhccC-Ccc
Confidence 432111 00 01100 1111 123456689999999999999999999864332 11111111111 111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...+. ..+ ..+.+++.+||+.||.+|||+.||++
T Consensus 242 ~~~~~---~~~----~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 LLTPS---KWS----VEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp CSSGG---GSC----HHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCCcc---ccC----HHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11111 111 23678999999999999999999975
No 174
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.4e-34 Score=302.33 Aligned_cols=243 Identities=23% Similarity=0.335 Sum_probs=182.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN------- 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-------
Confidence 456888999999999999999865 68999999986443 234578899999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 79 -~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 79 -IQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp -EEEEEEECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred -EEEEEEEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCC
Confidence 689999999999999998653 3488999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccc------c-ccCC-CCCCcc---cCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 640 SIVSEDINS------V-GGKQ-EDPNSW---EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 640 a~~~~~~~~------~-~~~~-~~~~~~---~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
+........ . +... ..|... ...+.++|||||||++|||+||+.||.......... ....... ..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~--~~- 227 (276)
T 2yex_A 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-SDWKEKK--TY- 227 (276)
T ss_dssp CEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHH-HHHHTTC--TT-
T ss_pred ccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHH-HHhhhcc--cc-
Confidence 865322110 0 0000 111111 112346899999999999999999987543221111 1111110 00
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+ ....+ ..+.+++.+||+.||.+|||+.||++
T Consensus 228 ~~~--~~~~~----~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 228 LNP--WKKID----SAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp STT--GGGSC----HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCc--hhhcC----HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000 00111 23678999999999999999999975
No 175
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.8e-34 Score=306.24 Aligned_cols=242 Identities=19% Similarity=0.342 Sum_probs=185.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.+.|+..+.||+|+||.||+|+. .+++.||||.+.... ....+.+.+|+.++++++||||+++++++.+..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT------- 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-------
Confidence 35688889999999999999985 468999999986543 344678999999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 -~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 94 -KLWIIMEYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp -EEEEEEECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred -eEEEEEEeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeeccc
Confidence 689999999999999998642 488999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccccc----c----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSVG----G----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~~----~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+.......... + ..++......++.++|||||||++|||++|+.|+...... .....+.. ... +
T Consensus 166 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-~~~-----~ 237 (303)
T 3a7i_A 166 AGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPK-NNP-----P 237 (303)
T ss_dssp CEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHH-SCC-----C
T ss_pred ceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhc-CCC-----C
Confidence 86543321110 0 0011011123456889999999999999999998643321 11111111 111 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
......+ ..+.+++.+||+.||.+|||+.||++..
T Consensus 238 ~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 238 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCCSSCC----HHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCccccC----HHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 1111122 2367899999999999999999998753
No 176
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.1e-35 Score=309.92 Aligned_cols=248 Identities=19% Similarity=0.359 Sum_probs=178.9
Q ss_pred cCCCcCCceecCCceeEEEEEec--CCc--eEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE--NGT--SVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~--~g~--~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
++|++.+.||+|+||.||+|++. ++. .||||+++.. .....+.+.+|++++++++||||+++++++.+.
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 93 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP---- 93 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC----
Confidence 56888999999999999999853 333 6899998754 234567899999999999999999999998764
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 94 -----~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~ 163 (291)
T 1u46_A 94 -----PMKMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIG 163 (291)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEEC
T ss_pred -----CceeeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEc
Confidence 3689999999999999987642 2488999999999999999999997 89999999999999999999999
Q ss_pred cCCCCcccccccccc---cCCCCCCcc--------cCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhccc
Q 004232 636 DYGLSIVSEDINSVG---GKQEDPNSW--------EMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 636 DFGla~~~~~~~~~~---~~~~~~~~~--------~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
|||++.......... .....+..+ ..++.++|||||||++|||++ |+.|+..... ......+....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~ 241 (291)
T 1u46_A 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQILHKIDKEG 241 (291)
T ss_dssp CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTSC
T ss_pred cccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--HHHHHHHHccC
Confidence 999986643221110 000000011 223457899999999999999 9999864322 12222221111
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
.. ...+ ...+ ..+.+++.+||+.||.+||++.+|++.|+++..
T Consensus 242 ~~--~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 242 ER--LPRP---EDCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp CC--CCCC---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred CC--CCCC---cCcC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 11 1111 1111 347789999999999999999999999998753
No 177
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.4e-34 Score=315.16 Aligned_cols=266 Identities=16% Similarity=0.256 Sum_probs=187.0
Q ss_pred HHHHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh-----------hhhHHHHHHHHHHHHhCCCCCccc
Q 004232 475 LEELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK-----------KYTVRNLKLRLDLLAKLRHPHLVC 543 (766)
Q Consensus 475 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-----------~~~~~~~~~e~~~l~~l~Hpniv~ 543 (766)
.+++....++|.+.+.||+|+||.||+|+..+|..||||++.... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 567888889999999999999999999998889999999885421 122478999999999999999999
Q ss_pred ccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCc
Q 004232 544 LLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNN 623 (766)
Q Consensus 544 l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~N 623 (766)
+++++...+.. .....++||||++ |+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+|
T Consensus 94 ~~~~~~~~~~~---~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 94 LRDIFVHFEEP---AMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CSEEEEECCTT---TCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred eeeeEEeccCC---CcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 99998764311 1236899999999 68888886542 3589999999999999999999997 89999999999
Q ss_pred eEEcCCCcEEEecCCCCcccccccccc---cCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HH
Q 004232 624 ILLNEHRIAKLSDYGLSIVSEDINSVG---GKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QE 694 (766)
Q Consensus 624 ILld~~~~~kl~DFGla~~~~~~~~~~---~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~ 694 (766)
|+++.++.+||+|||++.......... ++. ..|. ....++.++|||||||++|||+||+.||....... ..
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp EEECTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EEEcCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999999999999999996432221111 000 1111 11345677899999999999999999987433211 11
Q ss_pred HHhhhhcccCcc-----------cccccccc--CCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 695 ELDSLNSQEGRQ-----------RLVDPVVM--ATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 695 ~~~~~~~~~~~~-----------~~~d~~~~--~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+.......... ........ ..... .....+.+++.+|++.||.+|||+.|+++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111100000000 00000000 00000 012347789999999999999999999864
No 178
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.5e-34 Score=305.32 Aligned_cols=241 Identities=21% Similarity=0.313 Sum_probs=184.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|.+.+.||+|+||.||+|+.. +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 356888999999999999999965 5889999998653 2345677899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++++|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ---~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 ---FVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp ---EEEEEEECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred ---EEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 6899999999999999887543 488999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc----cCC--CCC--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVG----GKQ--EDP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~----~~~--~~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++.......... ++. ..| ......+.++|||||||++|||+||+.|+..... .+....+.... ..+
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~--~~~- 234 (294)
T 2rku_A 160 GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYLRIKKNE--YSI- 234 (294)
T ss_dssp TTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHTTC--CCC-
T ss_pred cCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhhcc--CCC-
Confidence 9986543211110 000 001 1112345678999999999999999999864332 12122221111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+ ...+ ..+.+++.+||+.||.+||+++|+++.
T Consensus 235 -~---~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 235 -P---KHIN----PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -C---TTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -c---cccC----HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 1111 236788999999999999999999875
No 179
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.6e-35 Score=313.38 Aligned_cols=237 Identities=16% Similarity=0.221 Sum_probs=172.1
Q ss_pred CCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcceEEEE
Q 004232 488 SAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|+.++++++ ||||+++++++.+.. ..++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~--------~~~lv 84 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL--------HTFLV 84 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS--------EEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC--------EEEEE
Confidence 378999999999999864 6899999998643 3456788999999997 999999999998753 78999
Q ss_pred EEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC---cEEEecCCCCcc
Q 004232 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR---IAKLSDYGLSIV 642 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~---~~kl~DFGla~~ 642 (766)
|||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 85 MELLNGGELFERIKKKK---HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp ECCCCSCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 99999999999998653 489999999999999999999997 899999999999998665 899999999975
Q ss_pred ccccccc--------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc-----chHHHHhhhhcccCccccc
Q 004232 643 SEDINSV--------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ-----FLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 643 ~~~~~~~--------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 709 (766)
....... .+..++......++.++|||||||++|||++|+.||..... ........+.... ....
T Consensus 159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~--~~~~ 236 (325)
T 3kn6_A 159 KPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGD--FSFE 236 (325)
T ss_dssp CCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTC--CCCC
T ss_pred cCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCC--CCCC
Confidence 4322111 01111111223345678999999999999999999864321 1111122221111 0111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.+.. .. ....+.+++.+|++.||.+|||++|+++
T Consensus 237 ~~~~-~~----~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 237 GEAW-KN----VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SHHH-HT----SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred cccc-cC----CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0000 01 1234778999999999999999999874
No 180
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=7.5e-35 Score=317.65 Aligned_cols=242 Identities=20% Similarity=0.302 Sum_probs=173.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHH-HHhCCCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~-l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|..+ ++.++|||||++++++.+.+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~---- 112 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---- 112 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC----
Confidence 467999999999999999999965 58899999996543 2234556667766 57789999999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..|+||||+++|+|.+++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||++.++++||+|
T Consensus 113 ----~~~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 113 ----KLYFVLDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp ----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred ----EEEEEEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 7899999999999999997643 378888899999999999999997 899999999999999999999999
Q ss_pred CCCCcccccccc-c---ccCCCC--C--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 637 YGLSIVSEDINS-V---GGKQED--P--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~-~---~~~~~~--~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
||+++....... . .++..+ | .....++.++|||||||++|||++|+.||..... ......+.... ..+
T Consensus 183 FG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~--~~~ 258 (373)
T 2r5t_A 183 FGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILNKP--LQL 258 (373)
T ss_dssp CCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHHHHSC--CCC
T ss_pred CccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHhcc--cCC
Confidence 999975322111 1 111110 1 1123456788999999999999999999864332 22222222211 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNL 750 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L 750 (766)
. ...+ ..+.+++.+|++.||.+||++.+.+..+
T Consensus 259 -~----~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 259 -K----PNIT----NSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp -C----SSSC----HHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred -C----CCCC----HHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1 1111 2367899999999999999986544333
No 181
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=8.1e-35 Score=314.13 Aligned_cols=243 Identities=21% Similarity=0.311 Sum_probs=178.3
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||+++.... ...+|++++.++ +||||+++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~------- 89 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK------- 89 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS-------
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC-------
Confidence 467899999999999999999864 689999999976532 235678888887 7999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC----CcEEEe
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH----RIAKLS 635 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~----~~~kl~ 635 (766)
..++||||+++|+|.+++.+.. .+++.....++.+|+.||+|||+. +|+||||||+|||+.++ +.+||+
T Consensus 90 -~~~lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~ 162 (342)
T 2qr7_A 90 -YVYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRIC 162 (342)
T ss_dssp -EEEEEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEEC
T ss_pred -EEEEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEE
Confidence 7899999999999999987543 488999999999999999999997 89999999999998533 359999
Q ss_pred cCCCCcccccccccccC-CCCCCcc-------cCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCcc
Q 004232 636 DYGLSIVSEDINSVGGK-QEDPNSW-------EMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGRQ 706 (766)
Q Consensus 636 DFGla~~~~~~~~~~~~-~~~~~~~-------~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~~ 706 (766)
|||+++........... ...+.+. ..++.++|||||||++|||++|..||....... ......+.... .
T Consensus 163 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~ 240 (342)
T 2qr7_A 163 DFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--F 240 (342)
T ss_dssp CCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--C
T ss_pred ECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--c
Confidence 99999764332211111 1111110 113457899999999999999999997432222 22222222111 1
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+ .....+ ..+.+++.+|++.||.+||++.||++.
T Consensus 241 ~~~~~-~~~~~s----~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 241 SLSGG-YWNSVS----DTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp CCCST-TTTTSC----HHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ccCcc-ccccCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11111 111112 236789999999999999999999864
No 182
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.4e-34 Score=311.71 Aligned_cols=241 Identities=21% Similarity=0.313 Sum_probs=184.9
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC---hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS---KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|.+.+.||+|+||.||+++.. +++.||+|.+... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND----- 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 467888999999999999999965 5889999998653 2345677899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 115 ---~~~lv~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 ---FVFVVLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp ---EEEEEECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred ---eEEEEEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 7899999999999999887643 488999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc----cCC--CCC--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVG----GKQ--EDP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~----~~~--~~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++.......... ++. ..| ......+.++|||||||++|||++|+.||..... ...+..+.... ..+
T Consensus 186 g~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~--~~~- 260 (335)
T 2owb_A 186 GLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--KETYLRIKKNE--YSI- 260 (335)
T ss_dssp TTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC--CCC-
T ss_pred cCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHhcCC--CCC-
Confidence 9996543211110 000 001 0112345678999999999999999999864322 12222221111 111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+ ...+ ..+.+++.+||+.||.+||++.|+++.
T Consensus 261 -~---~~~~----~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 261 -P---KHIN----PVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -C---TTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -C---ccCC----HHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0 1111 236788999999999999999999864
No 183
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.3e-34 Score=322.47 Aligned_cols=189 Identities=21% Similarity=0.354 Sum_probs=142.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||+||+|+.. +|+.||||++... .....+++.+|+++|++++|||||++++++...... ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---~~ 129 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVE---KF 129 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT---TC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcc---cC
Confidence 67999999999999999999854 7899999998653 344567899999999999999999999998754311 12
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..+|+||||+. |+|.+++... ..+++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 46899999985 6999988754 3489999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccc--------------------------------cccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcC
Q 004232 640 SIVSEDINS--------------------------------VGGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAG 681 (766)
Q Consensus 640 a~~~~~~~~--------------------------------~~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG 681 (766)
++....... .++.. ..|. ....++.++|||||||++|||+||
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 976432110 00000 0111 123456788999999999999994
No 184
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1e-34 Score=305.15 Aligned_cols=243 Identities=17% Similarity=0.247 Sum_probs=181.4
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC--hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~ 556 (766)
..++|++.+.||+|+||.||+|+.. +++.||||+++.. ......++.+|+..+.++ +||||+++++++.+.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~---- 84 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD---- 84 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC----
Confidence 3467889999999999999999975 7999999998753 234467788999999999 9999999999998763
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-------
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTP-GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE------- 628 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------- 628 (766)
..++||||+++|+|.+++.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 85 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~ 157 (289)
T 1x8b_A 85 ----HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAA 157 (289)
T ss_dssp ----EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------
T ss_pred ----eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccc
Confidence 78999999999999999975421 13488999999999999999999997 8999999999999984
Q ss_pred ------------CCcEEEecCCCCcccccccccccCC--CCCCcc---cCCCCCCCEeehhHHHHHHhcCCCccccCccc
Q 004232 629 ------------HRIAKLSDYGLSIVSEDINSVGGKQ--EDPNSW---EMTKLEDDVFSFGFMLLESVAGPSVAARKGQF 691 (766)
Q Consensus 629 ------------~~~~kl~DFGla~~~~~~~~~~~~~--~~~~~~---~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~ 691 (766)
...+||+|||++..........++. ..|... ...+.++|||||||++|||++|.+++.....
T Consensus 158 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~- 236 (289)
T 1x8b_A 158 SEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ- 236 (289)
T ss_dssp ------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH-
T ss_pred ccccccccccCCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH-
Confidence 4479999999987654322211111 011111 1223478999999999999999877643211
Q ss_pred hHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 692 LQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. .+.. .....+ ....+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 237 -~~---~~~~-~~~~~~-----~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 -WH---EIRQ-GRLPRI-----PQVLS----QEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp -HH---HHHT-TCCCCC-----SSCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -HH---HHHc-CCCCCC-----CcccC----HHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11 1111 111111 11112 236789999999999999999999753
No 185
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.4e-35 Score=325.03 Aligned_cols=246 Identities=13% Similarity=0.146 Sum_probs=174.5
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC---hhhhHHHHHHHH---HHHHhCCCCCcccccc-------e
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS---KKYTVRNLKLRL---DLLAKLRHPHLVCLLG-------H 547 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~e~---~~l~~l~Hpniv~l~g-------~ 547 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +++++++|||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999995 57999999998632 334567899999 5566668999999994 4
Q ss_pred eecCCC---------CCCcCcceEEEEEEccCCCChhhhhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCc
Q 004232 548 CIDGGG---------RDDYAVNKVFLVYEFMSNGNFRTHISENTP----GKVLNWSERLAVLIGVAKAVQFLHTGVIPGF 614 (766)
Q Consensus 548 ~~~~~~---------~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 614 (766)
+.+.+. .+.......++||||+ +|+|.+++.+... ...++|..+..++.||+.||+|||+. +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 443321 0000001378999999 6899999975321 12245688889999999999999997 89
Q ss_pred ccCCCCCCceEEcCCCcEEEecCCCCccccccccc-ccCC-CCCC--ccc-----------CCCCCCCEeehhHHHHHHh
Q 004232 615 FNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSV-GGKQ-EDPN--SWE-----------MTKLEDDVFSFGFMLLESV 679 (766)
Q Consensus 615 vHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~-~~~~--~~~-----------~~~~~~DV~SfGvil~Ell 679 (766)
+||||||+|||++.++.+||+|||+++........ .+.. ..|. ... .++.++|||||||++|||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ell 307 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999754332111 1111 0111 112 4667899999999999999
Q ss_pred cCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 680 AGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 680 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
||+.||...... .....+... . ...+ ..+.+++.+||+.||.+||++.|+++
T Consensus 308 tg~~Pf~~~~~~-----------~~~~~~~~~-~-~~~~----~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 308 CADLPITKDAAL-----------GGSEWIFRS-C-KNIP----QPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HSSCCC-----------------CCSGGGGSS-C-CCCC----HHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HCCCCCcccccc-----------cchhhhhhh-c-cCCC----HHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999998632110 001111110 0 1112 23678999999999999999999986
No 186
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.2e-34 Score=338.65 Aligned_cols=249 Identities=20% Similarity=0.371 Sum_probs=188.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEec----CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE----NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~ 555 (766)
..++|++.+.||+|+||.||+|+.. .+..||||.++... ....+.+.+|+.++++++|||||+++|++.+.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~---- 463 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN---- 463 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC----
Confidence 3467888899999999999999864 25679999987543 34457899999999999999999999998542
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+
T Consensus 464 -----~~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~ 533 (656)
T 2j0j_A 464 -----PVWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 533 (656)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred -----ceEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEE
Confidence 4799999999999999997643 3488999999999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccccccc-CCC------CC--CcccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhhcccCc
Q 004232 636 DYGLSIVSEDINSVGG-KQE------DP--NSWEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 636 DFGla~~~~~~~~~~~-~~~------~~--~~~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
|||+++.......... ... .| .....++.++|||||||++|||++ |..||..... ......+... ..
T Consensus 534 DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i~~~-~~ 610 (656)
T 2j0j_A 534 DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENG-ER 610 (656)
T ss_dssp CCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHHT-CC
T ss_pred ecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcC-CC
Confidence 9999976543221100 000 11 111345567899999999999997 8888864322 1112222111 11
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHh
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQ 755 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~ 755 (766)
..+ + ...+ ..+.+++.+||+.||.+||++.||+++|+.+..
T Consensus 611 ~~~--~---~~~~----~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 611 LPM--P---PNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp CCC--C---TTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCC--C---cccc----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 111 1 1111 347789999999999999999999999998864
No 187
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=317.51 Aligned_cols=236 Identities=17% Similarity=0.239 Sum_probs=181.4
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh--------hhHHHHHHHHHHHHhCCCCCcccccceeecC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDG 551 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~ 551 (766)
..++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 346789999999999999999985 5789999999875431 1234677899999999999999999999875
Q ss_pred CCCCCcCcceEEEEEEccCCC-ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC
Q 004232 552 GGRDDYAVNKVFLVYEFMSNG-NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR 630 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~G-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~ 630 (766)
+ ..++||||+.+| +|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++
T Consensus 102 ~--------~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 102 G--------FFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp S--------EEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTS
T ss_pred C--------EEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCC
Confidence 3 789999999877 9999987643 489999999999999999999997 899999999999999999
Q ss_pred cEEEecCCCCccccccccccc---CC--CCCC--cccC-CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc
Q 004232 631 IAKLSDYGLSIVSEDINSVGG---KQ--EDPN--SWEM-TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~~~---~~--~~~~--~~~~-~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
.+||+|||++........... +. ..|. .... .+.++|||||||++|||++|+.||..... ...
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~- 238 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------TVE- 238 (335)
T ss_dssp CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------GTT-
T ss_pred cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------HHh-
Confidence 999999999976543221111 10 0111 1111 24578999999999999999999863111 000
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+. ..+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 239 ---~~~~~~~---~~~----~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 ---AAIHPPY---LVS----KELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TCCCCSS---CCC----HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---hccCCCc---ccC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011111 111 236789999999999999999999875
No 188
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=8.4e-35 Score=316.74 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=184.3
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+.. ++..||+|++... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 104 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-------- 104 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT--------
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC--------
Confidence 56888999999999999999965 6899999998754 3445678999999999999999999999998763
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEEEEECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 7899999999999999997653 3889999999999999999999832 6999999999999999999999999998
Q ss_pred ccccccccc--ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC----------
Q 004232 641 IVSEDINSV--GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG---------- 704 (766)
Q Consensus 641 ~~~~~~~~~--~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~---------- 704 (766)
......... .++ .++......++.++|||||||++|||+||+.||...................
T Consensus 180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T 3eqc_A 180 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRT 259 (360)
T ss_dssp HHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------
T ss_pred cccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCccc
Confidence 643221111 111 1111111234567899999999999999999987433221111100000000
Q ss_pred -----------------c----cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 -----------------R----QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 -----------------~----~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. ..+................+.+++.+||+.||.+|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 260 PGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0 00000000000000011247789999999999999999999865
No 189
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-34 Score=301.90 Aligned_cols=241 Identities=22% Similarity=0.329 Sum_probs=182.8
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|.+.+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 84 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT----- 84 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----
Confidence 357888999999999999999975 79999999986542 223567899999999999999999999988753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++++|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 85 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 85 ---DFFMVMEYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp ---EEEEEEECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCC
T ss_pred ---eEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeec
Confidence 7899999999999999997653 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccccc---C--CCCCCcc--c-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVGG---K--QEDPNSW--E-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~~---~--~~~~~~~--~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|++........... + ...|... . ..+.++||||||+++|||++|+.|+..... ......+... ...+
T Consensus 156 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~--~~~~- 230 (276)
T 2h6d_A 156 GLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGG--VFYI- 230 (276)
T ss_dssp CGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC--CCCC-
T ss_pred ccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcC--cccC-
Confidence 99865433211100 0 0111111 1 123578999999999999999999864322 1112222111 0111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
| ...+ ..+.+++.+|++.||.+|||+.||++.
T Consensus 231 -~---~~~~----~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 -P---EYLN----RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -C---TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -c---hhcC----HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1 1111 236789999999999999999999874
No 190
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.1e-34 Score=329.95 Aligned_cols=245 Identities=19% Similarity=0.282 Sum_probs=184.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~----- 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD----- 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----
Confidence 466888999999999999999864 79999999986532 223567889999999999999999999988753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.... ...+++..+..++.+|+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 258 ---~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ---ALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp ---EEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred ---EEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 7899999999999999987643 23488999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccccCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcccCccccc
Q 004232 638 GLSIVSEDINSVGGKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 638 Gla~~~~~~~~~~~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 709 (766)
|+++..............+. ....++.++|||||||++|||++|+.||...... ....+....... ...+
T Consensus 331 Gla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~~~~- 408 (576)
T 2acx_A 331 GLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEEY- 408 (576)
T ss_dssp TTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-CCCC-
T ss_pred ccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-cccC-
Confidence 99976543221111111111 1123456789999999999999999999753221 111111111110 0111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILW 748 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~ 748 (766)
....+ ..+.+|+.+|++.||.+|| +++||++
T Consensus 409 ----p~~~s----~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 409 ----SERFS----PQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp ----CTTSC----HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ----CccCC----HHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 01111 2367899999999999999 6777764
No 191
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=5.4e-35 Score=309.82 Aligned_cols=253 Identities=19% Similarity=0.322 Sum_probs=170.3
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ....+++.+|+.++++++||||+++++++.+.+
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 86 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD------ 86 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS------
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC------
Confidence 357899999999999999999985 468999999986543 334567889999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 559 VNKVFLVYEFMSNGNFRTHISEN-----TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
..++||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 87 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 87 --ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEE
T ss_pred --CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEE
Confidence 689999999999999988641 1234589999999999999999999997 899999999999999999999
Q ss_pred EecCCCCccccccccc---------ccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhh
Q 004232 634 LSDYGLSIVSEDINSV---------GGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSL 699 (766)
Q Consensus 634 l~DFGla~~~~~~~~~---------~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~ 699 (766)
|+|||++......... .++. ..|.. ....+.++|||||||++|||+||+.||.......... ...
T Consensus 162 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~ 240 (303)
T 2vwi_A 162 IADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM-LTL 240 (303)
T ss_dssp ECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH-HHH
T ss_pred EEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH-HHh
Confidence 9999998654321100 0000 01110 1245678999999999999999999987543221111 111
Q ss_pred hcc-c-CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 700 NSQ-E-GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 700 ~~~-~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... . ......++......+ ..+.+++.+||+.||.+||++.||++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEMLKKYG----KSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TSSCCCTTC-----CCCCCCC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccCCCccccccccchhhhhhh----HHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 100 0 011111122222222 236789999999999999999999863
No 192
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.7e-34 Score=327.04 Aligned_cols=245 Identities=17% Similarity=0.233 Sum_probs=182.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh-------------hhHHHHHHHHHHHHhCCCCCcccccce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-------------YTVRNLKLRLDLLAKLRHPHLVCLLGH 547 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~~~~e~~~l~~l~Hpniv~l~g~ 547 (766)
.+.|.+.+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999964 688999999875421 235678999999999999999999999
Q ss_pred eecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc
Q 004232 548 CIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN 627 (766)
Q Consensus 548 ~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld 627 (766)
|.+.. ..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+|||++
T Consensus 115 ~~~~~--------~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 115 FEDKK--------YFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLE 180 (504)
T ss_dssp EECSS--------EEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEES
T ss_pred EEcCC--------EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEe
Confidence 98753 7899999999999999887653 389999999999999999999997 899999999999998
Q ss_pred CCC---cEEEecCCCCcccccccccccCCCCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhh
Q 004232 628 EHR---IAKLSDYGLSIVSEDINSVGGKQEDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDS 698 (766)
Q Consensus 628 ~~~---~~kl~DFGla~~~~~~~~~~~~~~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~ 698 (766)
.++ .+||+|||++...............+.+ ...++.++||||+||++|||++|..||..... ......
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~ 258 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKK 258 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH
T ss_pred cCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHH
Confidence 765 6999999999765432211111111111 12356788999999999999999999974332 222222
Q ss_pred hhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 699 LNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 699 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.... .....+. ....+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 259 i~~~~--~~~~~~~-~~~~s----~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEKGK--YYFDFND-WKNIS----DEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHCC--CCCCHHH-HTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHcCC--CCCCccc-cCCCC----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 22111 1110010 11111 237789999999999999999999864
No 193
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-34 Score=303.76 Aligned_cols=241 Identities=17% Similarity=0.303 Sum_probs=184.2
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
.++|++.+.||+|+||.||+|+.. +++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK----- 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC-----
Confidence 357888999999999999999865 68899999986432 223567899999999999999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 88 ---~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 ---RIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp ---EEEEEECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred ---EEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 7899999999999999997653 388999999999999999999997 8999999999999999999999999
Q ss_pred CCCcccccccccc--cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 638 GLSIVSEDINSVG--GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 638 Gla~~~~~~~~~~--~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
|++.......... +. .++......++.++|||||||++|||++|+.||...... .....+.... ..
T Consensus 159 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~--~~---- 230 (284)
T 2vgo_A 159 GWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVNVD--LK---- 230 (284)
T ss_dssp TTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTC--CC----
T ss_pred cccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhccc--cC----
Confidence 9986543221111 00 011111133567899999999999999999998743321 1111111111 01
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+ ..+.+++.+|++.||.+||+++|+++.
T Consensus 231 -~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 231 -FPPFLS----DGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -CCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -CCCcCC----HHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 111111 236789999999999999999999864
No 194
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.1e-34 Score=327.07 Aligned_cols=244 Identities=21% Similarity=0.284 Sum_probs=180.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
+.|++.+.||+|+||+||+|+.. ++..||||++.... ....+.+.+|+.++++++|||||+++++|.+..
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------- 109 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR------- 109 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-------
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-------
Confidence 46888999999999999999964 68999999987543 233567899999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~D 636 (766)
..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+|||++. ++.+||+|
T Consensus 110 -~~~lv~e~~~~g~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 110 -NYYLVMECYKGGELFDEIIHRM---KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp -EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred -EEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEE
Confidence 7899999999999999887653 388999999999999999999997 8999999999999976 45699999
Q ss_pred CCCCcccccccccccCCCCCCc------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccccc
Q 004232 637 YGLSIVSEDINSVGGKQEDPNS------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVD 710 (766)
Q Consensus 637 FGla~~~~~~~~~~~~~~~~~~------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d 710 (766)
||++...............+.+ ...++.++||||+||++|||++|..||..... ......+... ......
T Consensus 183 fG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~--~~~~~~ 258 (494)
T 3lij_A 183 FGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVEKG--KYTFDS 258 (494)
T ss_dssp CTTCEECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT--CCCCCS
T ss_pred CCCCeECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC--CCCCCc
Confidence 9999765432221111111110 12356789999999999999999999974332 2222222111 111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 711 PVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 711 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+.. ...+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 259 ~~~-~~~s----~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 259 PEW-KNVS----EGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp GGG-TTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred hhc-ccCC----HHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111 1112 236789999999999999999999854
No 195
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-34 Score=312.20 Aligned_cols=254 Identities=23% Similarity=0.348 Sum_probs=181.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||++++++|.+.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 97 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK------ 97 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC------
Confidence 356888999999999999999965 58999999885433 334567889999999999999999999998763
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+++++|..++.... .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 --~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 98 --RWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp --EEEEEEECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred --EEEEEEecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 7899999999999988765433 389999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc----ccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhh---------
Q 004232 639 LSIVSEDINSV----GGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSL--------- 699 (766)
Q Consensus 639 la~~~~~~~~~----~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~--------- 699 (766)
++......... .++. ..|.. ...++.++|||||||++|||+||+.||........ ..+...
T Consensus 170 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (331)
T 4aaa_A 170 FARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQ 249 (331)
T ss_dssp TC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred CceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhh
Confidence 99654321111 0110 01111 12356678999999999999999999875432111 000000
Q ss_pred ---hcccCccccccccccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 700 ---NSQEGRQRLVDPVVMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 700 ---~~~~~~~~~~d~~~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...........+........ .....+.+++.+||+.||.+|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000111111111111 112347899999999999999999999864
No 196
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.1e-34 Score=311.68 Aligned_cols=254 Identities=16% Similarity=0.197 Sum_probs=177.6
Q ss_pred HHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
...++|++.+.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 106 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH---- 106 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC----
Confidence 3457899999999999999999985 4789999999975432 23456789999999999999999999998763
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-----CCCc
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-----EHRI 631 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-----~~~~ 631 (766)
..++||||++ |+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++ .++.
T Consensus 107 ----~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~ 175 (329)
T 3gbz_A 107 ----RLHLIFEYAE-NDLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPV 175 (329)
T ss_dssp ----EEEEEEECCS-EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCE
T ss_pred ----EEEEEEecCC-CCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccce
Confidence 7899999998 49999987653 388999999999999999999997 899999999999994 5556
Q ss_pred EEEecCCCCccccccccc-----ccCC-CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhhhc
Q 004232 632 AKLSDYGLSIVSEDINSV-----GGKQ-EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSLNS 701 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~-----~~~~-~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~~~ 701 (766)
+||+|||++......... ++.. ..|.. ...++.++|||||||++|||++|+.||........ ..+.....
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 255 (329)
T 3gbz_A 176 LKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG 255 (329)
T ss_dssp EEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred EEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhC
Confidence 999999998654321111 0100 11111 12356789999999999999999999875432111 11111000
Q ss_pred ccCccc---------cc--cccccCCCCHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 702 QEGRQR---------LV--DPVVMATSSLE-----SLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 702 ~~~~~~---------~~--d~~~~~~~~~~-----~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
...... .. .+......... ....+.+++.+|++.||.+|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 256 LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000000 00 00000000000 1134679999999999999999999875
No 197
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-34 Score=312.73 Aligned_cols=255 Identities=18% Similarity=0.293 Sum_probs=179.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.+.|+..+.||+|+||.||+|+. .+|+.||||++... .....+++.+|++++++++||||+++++++...+... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~--~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD--D 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT--T
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc--c
Confidence 35788899999999999999986 47999999998543 3344677899999999999999999999987653211 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++||||+ +++|.+++... .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 13579999999 88999998753 388999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc--ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-cC-------
Q 004232 639 LSIVSEDINSV--GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-EG------- 704 (766)
Q Consensus 639 la~~~~~~~~~--~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~------- 704 (766)
+++........ ++.. ..|. ....++.++||||+||++|||++|+.||...... ..+..+... +.
T Consensus 174 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 174 LARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp TCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHH
T ss_pred cccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHHH
Confidence 99765432111 1110 1111 1134677899999999999999999998743321 111111100 00
Q ss_pred -------------ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 -------------RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 -------------~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
........... ........+.+|+.+|++.||.+|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFAS-ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGG-TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHH-HCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000000000 000112347789999999999999999998764
No 198
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.8e-34 Score=325.40 Aligned_cols=244 Identities=18% Similarity=0.278 Sum_probs=183.9
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.+.|++.+.||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++.+..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 94 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS------ 94 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC------
Confidence 356889999999999999999864 78999999986432 234577899999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc---CCCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN---EHRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld---~~~~~kl~ 635 (766)
..++||||+++|+|.+++.+.. .+++.....++.+++.||+|||+. +|+||||||+|||++ .++.+||+
T Consensus 95 --~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 95 --SFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred --EEEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEE
Confidence 7899999999999999887653 388999999999999999999997 899999999999995 45679999
Q ss_pred cCCCCccccccccc----c---cCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcccc
Q 004232 636 DYGLSIVSEDINSV----G---GKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRL 708 (766)
Q Consensus 636 DFGla~~~~~~~~~----~---~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 708 (766)
|||+++........ + +..++.. ...++.++||||+||++|||++|+.||..... ......+.... ...
T Consensus 167 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~--~~~ 241 (486)
T 3mwu_A 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVETGK--YAF 241 (486)
T ss_dssp SCSCTTTBCCC----CCTTGGGGCCGGGG-GSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTC--CCS
T ss_pred ECCcCeECCCCCccCCCcCCCCCCCHHHh-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC--CCC
Confidence 99999754332111 1 1111111 12355678999999999999999999864332 12222221111 111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.. ...+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 242 ~~~~~-~~~s----~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 DLPQW-RTIS----DDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSGGG-GGSC----HHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCccc-CCCC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11111 1112 236789999999999999999999874
No 199
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.6e-34 Score=308.76 Aligned_cols=248 Identities=18% Similarity=0.305 Sum_probs=179.8
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+. .+++.||||+++... .+.+.+|++++++++ ||||+++++++.+... .
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~------~ 106 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVS------R 106 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTT------C
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCC------C
Confidence 6788999999999999999985 578999999987543 367889999999997 9999999999987432 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC-cEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-IAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-~~kl~DFGl 639 (766)
..++||||+++++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 68999999999999998853 77889999999999999999997 899999999999999776 899999999
Q ss_pred CcccccccccccCCC-----CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH--HhhhhcccCcccc-
Q 004232 640 SIVSEDINSVGGKQE-----DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE--LDSLNSQEGRQRL- 708 (766)
Q Consensus 640 a~~~~~~~~~~~~~~-----~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~--~~~~~~~~~~~~~- 708 (766)
++............. .|. ....++.++|||||||++|||++|+.|+.......... +..........+.
T Consensus 178 a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 257 (330)
T 3nsz_A 178 AEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257 (330)
T ss_dssp CEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred ceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHH
Confidence 975433221111110 111 11345678899999999999999999985432211100 0000000000000
Q ss_pred ------ccc----------------cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 709 ------VDP----------------VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 709 ------~d~----------------~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.++ .............+.+++.+|++.||.+|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 0000000001234788999999999999999999975
No 200
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.4e-34 Score=327.97 Aligned_cols=244 Identities=20% Similarity=0.301 Sum_probs=185.5
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
+.|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++|||||++++++.+.+
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 99 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG------ 99 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC------
Confidence 56888999999999999999865 78999999986432 334678999999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE---cCCCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~ 635 (766)
..++||||+++|+|.+++.... .+++..+..++.+++.||+|||+. +|+||||||+|||+ +.++.+||+
T Consensus 100 --~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 171 (484)
T 3nyv_A 100 --YFYLVGEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRII 171 (484)
T ss_dssp --EEEEEECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred --EEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEE
Confidence 7899999999999999887543 488999999999999999999997 89999999999999 467899999
Q ss_pred cCCCCccccccccc----ccCCC-CCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 636 DYGLSIVSEDINSV----GGKQE-DPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 636 DFGla~~~~~~~~~----~~~~~-~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|||++......... ++... .|. ....++.++||||+||++|||++|+.||...... .....+.... ....
T Consensus 172 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~--~~~~ 247 (484)
T 3nyv_A 172 DFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGK--YTFE 247 (484)
T ss_dssp CTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC--CCCC
T ss_pred eeeeeEEcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCC--CCCC
Confidence 99998654332111 11000 110 0124567899999999999999999999754322 2222222111 1111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+.. ...+ ..+.+++.+|++.||.+|||+.|+++.
T Consensus 248 ~~~~-~~~s----~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 LPQW-KKVS----ESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp SGGG-GGSC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred Cccc-ccCC----HHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 1111 1111 236789999999999999999999864
No 201
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3e-35 Score=314.39 Aligned_cols=254 Identities=18% Similarity=0.306 Sum_probs=182.6
Q ss_pred HHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 477 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
++....++|++.+.||+|+||.||+|+... .||||+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-- 102 (319)
T 2y4i_B 27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP-- 102 (319)
T ss_dssp GSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS--
T ss_pred cccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC--
Confidence 333345788999999999999999998753 59999986532 223456788999999999999999999998763
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEE
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKL 634 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl 634 (766)
..++||||+++|+|.+++.+.. ..+++..+..++.+++.||+|||+. +|+||||||+||+++ ++.+||
T Consensus 103 ------~~~iv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l 170 (319)
T 2y4i_B 103 ------HLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVI 170 (319)
T ss_dssp ------CEEEECBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEE
T ss_pred ------ceEEEeecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEE
Confidence 6899999999999999997643 3588999999999999999999997 899999999999998 679999
Q ss_pred ecCCCCcccccccc------c----ccCC-CCCCc-----------ccCCCCCCCEeehhHHHHHHhcCCCccccCccch
Q 004232 635 SDYGLSIVSEDINS------V----GGKQ-EDPNS-----------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL 692 (766)
Q Consensus 635 ~DFGla~~~~~~~~------~----~~~~-~~~~~-----------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~ 692 (766)
+|||++........ . +... ..|.. ...++.++|||||||++|||+||+.||......
T Consensus 171 ~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~- 249 (319)
T 2y4i_B 171 TDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE- 249 (319)
T ss_dssp CCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-
T ss_pred eecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 99999754321100 0 0000 01110 122455789999999999999999998743322
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
.....+.. .......... .+ ..+.+++.+||+.||.+|||+.||+++|+.+....
T Consensus 250 -~~~~~~~~-~~~~~~~~~~----~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 250 -AIIWQMGT-GMKPNLSQIG----MG----KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -HHHHHHHT-TCCCCCCCSS----CC----TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -HHHHHhcc-CCCCCCCcCC----CC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 11111111 1111111111 11 12678999999999999999999999999876543
No 202
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.8e-34 Score=302.79 Aligned_cols=245 Identities=19% Similarity=0.256 Sum_probs=184.4
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---------hhhHHHHHHHHHHHHhCC-CCCcccccceee
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---------KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCI 549 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---------~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~ 549 (766)
..++|++.+.||+|+||.||+|+.. +|+.||||.++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3567999999999999999999964 68999999986432 223567889999999996 999999999997
Q ss_pred cCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 550 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
+.+ ..++||||+++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.+
T Consensus 95 ~~~--------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 95 TNT--------FFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD 160 (298)
T ss_dssp CSS--------EEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred cCC--------eEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCC
Confidence 653 7899999999999999997643 488999999999999999999997 89999999999999999
Q ss_pred CcEEEecCCCCcccccccccccCCC-----CCC--------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHH
Q 004232 630 RIAKLSDYGLSIVSEDINSVGGKQE-----DPN--------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEEL 696 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~~~~~~-----~~~--------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~ 696 (766)
+.+||+|||++.............. .|. ....++.++|||||||++|||++|+.|+...... ...
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~ 238 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LML 238 (298)
T ss_dssp CCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHH
T ss_pred CcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHH
Confidence 9999999999865432211111000 111 0123456889999999999999999998643321 111
Q ss_pred hhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 697 DSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 697 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+.... .....+.. ... ...+.+++.+||+.||.+||++.|+++
T Consensus 239 ~~~~~~~--~~~~~~~~-~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 239 RMIMSGN--YQFGSPEW-DDY----SDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHTC--CCCCTTTG-GGS----CHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHhcCC--cccCcccc-ccc----CHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1111111 11111111 111 123778999999999999999999975
No 203
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-34 Score=311.41 Aligned_cols=254 Identities=21% Similarity=0.325 Sum_probs=176.7
Q ss_pred HHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhh-----hHHHHHHHHHHHHhCCCCCcccccceeecCCC
Q 004232 480 EATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKY-----TVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 480 ~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~ 553 (766)
...++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 85 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS- 85 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT-
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC-
Confidence 34567999999999999999999964 6899999999753221 1246789999999999999999999987653
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
..++||||+++ +|..++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 86 -------~~~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 86 -------NISLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp -------CCEEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred -------ceEEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEE
Confidence 67999999996 8888886543 3478889999999999999999997 899999999999999999999
Q ss_pred EecCCCCcccccccccc----cCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhc---
Q 004232 634 LSDYGLSIVSEDINSVG----GKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNS--- 701 (766)
Q Consensus 634 l~DFGla~~~~~~~~~~----~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~--- 701 (766)
|+|||+++......... ++. ..|. ....++.++|||||||++|||++|..|+...... ..+..+..
T Consensus 153 l~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~--~~~~~i~~~~~ 230 (346)
T 1ua2_A 153 LADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL--DQLTRIFETLG 230 (346)
T ss_dssp ECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHC
T ss_pred EEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHcC
Confidence 99999997653221111 010 0111 1122456789999999999999999988643321 11111111
Q ss_pred ccCcccc------ccccc---cCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 QEGRQRL------VDPVV---MATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 ~~~~~~~------~d~~~---~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+ .+... ....+. .....+.+++.+|++.||.+|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 231 TPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000 00000 000000 111347899999999999999999999864
No 204
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-35 Score=312.80 Aligned_cols=253 Identities=18% Similarity=0.239 Sum_probs=178.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhh-HHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYT-VRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~-~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|.+.+.||+|+||.||+|+.. +++.||||++....... ...+.+|++++++++||||+++++++.+.+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-------- 73 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-------- 73 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS--------
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC--------
Confidence 56888999999999999999965 78999999986543221 224567999999999999999999998753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLS 640 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla 640 (766)
..++||||++ |+|.+++.... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 74 SLTLVFEYLD-KDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp CEEEEEECCS-EEHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEEEEecccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 6899999998 59998887653 3588999999999999999999997 8999999999999999999999999998
Q ss_pred ccccccccc-----ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCc---cc
Q 004232 641 IVSEDINSV-----GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGR---QR 707 (766)
Q Consensus 641 ~~~~~~~~~-----~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~---~~ 707 (766)
......... ++.. ..|. ....++.++|||||||++|||+||+.||....... ...+......... ..
T Consensus 148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 227 (324)
T 3mtl_A 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 227 (324)
T ss_dssp ECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred ccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchh
Confidence 654321111 0000 1111 11335678899999999999999999997543221 1111111110000 00
Q ss_pred ccc---------ccccCCCC----HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 708 LVD---------PVVMATSS----LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 708 ~~d---------~~~~~~~~----~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... +....... ......+.+++.+|++.||.+|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp GGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000 00000000 0011346789999999999999999999763
No 205
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=313.43 Aligned_cols=244 Identities=14% Similarity=0.176 Sum_probs=182.2
Q ss_pred HhcCCCcCCceecCCceeEEEEE------ecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC---CCCcccccceeecC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGR------LENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR---HPHLVCLLGHCIDG 551 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~---Hpniv~l~g~~~~~ 551 (766)
..++|.+.+.||+|+||+||+|. ..+++.||||+++... ..++.+|++++++++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 4568999999997653 356778888888887 99999999999876
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENT--PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE- 628 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~- 628 (766)
+ ..++||||+++|+|.+++.... ....++|..+..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 140 ~--------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~ 208 (365)
T 3e7e_A 140 N--------GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNG 208 (365)
T ss_dssp S--------CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGG
T ss_pred C--------CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEeccc
Confidence 4 6899999999999999997421 234589999999999999999999997 8999999999999998
Q ss_pred ----------CCcEEEecCCCCcccccc---cccc---cCC----CCCCcccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 629 ----------HRIAKLSDYGLSIVSEDI---NSVG---GKQ----EDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 629 ----------~~~~kl~DFGla~~~~~~---~~~~---~~~----~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
++.+||+|||+++..... .... ++. ++......++.++|||||||++|||+||+.|+...
T Consensus 209 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 288 (365)
T 3e7e_A 209 FLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN 288 (365)
T ss_dssp GTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred ccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence 899999999999653211 1110 111 11111233567899999999999999999998532
Q ss_pred ccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHHHh
Q 004232 689 GQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSR-PSFEDILWNLQYAAQ 755 (766)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~R-Ps~~ev~~~L~~~~~ 755 (766)
... ... .+.........+ .+.+++.+|++.+|.+| |+++++.+.|+...+
T Consensus 289 ~~~-------------~~~-~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 289 EGG-------------ECK-PEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ETT-------------EEE-ECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred CCC-------------cee-echhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 110 000 011111111222 35577889999999998 678888888887664
No 206
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.3e-34 Score=318.73 Aligned_cols=194 Identities=19% Similarity=0.289 Sum_probs=153.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+++|++++|||||++++++...+.. .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---~ 101 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLL---K 101 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTT---T
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCC---c
Confidence 36799999999999999999985 46889999999753 334567899999999999999999999998765311 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....|+||||+. |+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 236899999987 5999998754 3489999999999999999999998 89999999999999999999999999
Q ss_pred CCcccccccc--------------------------cccCC-C-CCC---cccCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 639 LSIVSEDINS--------------------------VGGKQ-E-DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 639 la~~~~~~~~--------------------------~~~~~-~-~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
+++....... ..++. . .|. ....++.++|||||||++|||++|..|+
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 9976432110 00010 0 111 1234567889999999999999864443
No 207
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-34 Score=305.19 Aligned_cols=234 Identities=16% Similarity=0.268 Sum_probs=174.1
Q ss_pred hcCCCcC-CceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHH-HhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMS-AIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLL-AKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~-~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l-~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|.+. ++||+|+||.||+|+. .+++.||||+++.. ..+.+|+.++ +..+||||+++++++..... .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~----~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYA----G 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET----T
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcC----C
Confidence 3567666 7899999999999986 57899999998653 3466788887 56699999999999875210 0
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~ 635 (766)
....++||||+++|+|.+++.+.. ...+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 136899999999999999998653 23589999999999999999999997 8999999999999997 7899999
Q ss_pred cCCCCcccccccccccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC--ccccccccc
Q 004232 636 DYGLSIVSEDINSVGGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG--RQRLVDPVV 713 (766)
Q Consensus 636 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~ 713 (766)
|||++..... ..++.++|||||||++|||+||+.||....... .......... ......+..
T Consensus 163 Dfg~a~~~~~--------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 226 (299)
T 3m2w_A 163 DFGFAKETTG--------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGMKTRIRMGQYEFPNPEW 226 (299)
T ss_dssp CCTTCEECTT--------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCSCCSSCTTCCSSCHHHH
T ss_pred cccccccccc--------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh--hhHHHHHHHhhccccCCchhc
Confidence 9999865321 223457899999999999999999986432111 0000000000 000000000
Q ss_pred cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 714 MATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 714 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... ...+.+++.+||+.||.+|||+.|+++.
T Consensus 227 -~~~----~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 227 -SEV----SEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp -TTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -ccC----CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 111 2347789999999999999999999874
No 208
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4e-34 Score=307.15 Aligned_cols=250 Identities=14% Similarity=0.231 Sum_probs=183.3
Q ss_pred HHHhcCCCcC-CceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCC-CCCcccccceeecCCC
Q 004232 479 KEATNNFDMS-AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGG 553 (766)
Q Consensus 479 ~~~~~~f~~~-~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~ 553 (766)
....+.|.+. +.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+.++++++ ||||+++++++.+.+
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~- 102 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS- 102 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC-
Confidence 3444556666 88999999999999865 68999999987543 233678899999999995 699999999998753
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CC
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HR 630 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~ 630 (766)
..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+. +|+||||||+||+++. ++
T Consensus 103 -------~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 103 -------EIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp -------EEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBC
T ss_pred -------eEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCC
Confidence 7899999999999999986532 24589999999999999999999997 8999999999999997 78
Q ss_pred cEEEecCCCCcccccccccc---c----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc
Q 004232 631 IAKLSDYGLSIVSEDINSVG---G----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE 703 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~~---~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~ 703 (766)
.+||+|||+++......... + ..++......++.++|||||||++|||+||+.||...... .....+....
T Consensus 172 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~ 249 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETYLNISQVN 249 (327)
T ss_dssp CEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTC
T ss_pred cEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHHHhcc
Confidence 99999999997653322111 1 1111111234567899999999999999999998643321 1111111110
Q ss_pred CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+. ....+ ..+.+++.+||+.||.+|||++|+++.
T Consensus 250 --~~~~~~~-~~~~~----~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 --VDYSEET-FSSVS----QLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp --CCCCTTT-TTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred --cccCchh-hcccC----HHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 1111111 11111 236789999999999999999999754
No 209
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-34 Score=317.02 Aligned_cols=263 Identities=15% Similarity=0.225 Sum_probs=178.0
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC-
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD- 556 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~- 556 (766)
....++|++.+.||+|+||+||+|+. .+|+.||||++..... ...+|+++|++++|||||++++++...+....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999985 5799999999865432 23479999999999999999999876432100
Q ss_pred -----------------------------cCcceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHH
Q 004232 557 -----------------------------YAVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFL 606 (766)
Q Consensus 557 -----------------------------~~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yL 606 (766)
......++||||++ |+|.+.+... .....+++.....++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 01134889999999 5877766531 1224589999999999999999999
Q ss_pred hcCCCCCcccCCCCCCceEEc-CCCcEEEecCCCCccccccccccc---CC--CCCC---cccCCCCCCCEeehhHHHHH
Q 004232 607 HTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLSIVSEDINSVGG---KQ--EDPN---SWEMTKLEDDVFSFGFMLLE 677 (766)
Q Consensus 607 H~~~~~~ivHrdlk~~NILld-~~~~~kl~DFGla~~~~~~~~~~~---~~--~~~~---~~~~~~~~~DV~SfGvil~E 677 (766)
|+. +|+||||||+||+++ .++.+||+|||+++.......... +. ..|. ....++.++|||||||++||
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 234 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHH
Confidence 997 899999999999998 688999999999975432221111 11 0111 11235678899999999999
Q ss_pred HhcCCCccccCccch-HHHHhhhhccc----------CccccccccccCC-----CCHHHHHHHHHHHHHhccCCCCCCC
Q 004232 678 SVAGPSVAARKGQFL-QEELDSLNSQE----------GRQRLVDPVVMAT-----SSLESLSIVISIANKCICSESWSRP 741 (766)
Q Consensus 678 lltG~~p~~~~~~~~-~~~~~~~~~~~----------~~~~~~d~~~~~~-----~~~~~~~~~~~l~~~C~~~~p~~RP 741 (766)
|++|+.||....... ...+....... ...++.-+..... .+......+.+|+.+||+.||.+||
T Consensus 235 ll~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 999999987533211 11111100000 0000000100000 0001123478999999999999999
Q ss_pred CHHHHHHH
Q 004232 742 SFEDILWN 749 (766)
Q Consensus 742 s~~ev~~~ 749 (766)
|+.|+++.
T Consensus 315 t~~e~l~h 322 (383)
T 3eb0_A 315 NPYEAMAH 322 (383)
T ss_dssp CHHHHHTS
T ss_pred CHHHHhcC
Confidence 99999853
No 210
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4e-35 Score=320.61 Aligned_cols=255 Identities=9% Similarity=0.020 Sum_probs=165.8
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHH---HHHhCCCCCccccc-------ce
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLD---LLAKLRHPHLVCLL-------GH 547 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~---~l~~l~Hpniv~l~-------g~ 547 (766)
..+|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+. +|+. +||||++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345888999999999999999964 78999999997643 234566778854 5555 799988755 33
Q ss_pred eecCCCCC---------CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCC
Q 004232 548 CIDGGGRD---------DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSER------LAVLIGVAKAVQFLHTGVIP 612 (766)
Q Consensus 548 ~~~~~~~~---------~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~ 612 (766)
+..++... .......++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~--- 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSK--- 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---
Confidence 33322100 001135899999999 899999976421 2345555 78889999999999997
Q ss_pred CcccCCCCCCceEEcCCCcEEEecCCCCccccccc-ccccCC--CCCC--cc--cCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 613 GFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDIN-SVGGKQ--EDPN--SW--EMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 613 ~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~-~~~~~~--~~~~--~~--~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
+|+||||||+|||++.++.+||+|||+++...... ....+. ..|. .. ..++.++|||||||++|||+||+.||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 89999999999999999999999999997654332 111111 1111 11 23566889999999999999999998
Q ss_pred ccCccchHHHHhhhhcc-cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 686 ARKGQFLQEELDSLNSQ-EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 686 ~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..........+...... ........+.. ... ...+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGSWKRPSLRVPGTDSLAFGSC-TPL----PDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTCCCBCCTTSCCCCSCCCTTS-SCC----CHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccchhhhhhhhccccccchhhc-cCC----CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 75322111100000000 00001111110 111 234778999999999999999999975
No 211
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4e-34 Score=321.64 Aligned_cols=255 Identities=15% Similarity=0.202 Sum_probs=183.7
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
.++|++.+.||+|+||.||+|+. .+++.||||++..... .+++.+|+++++.++|++.+..+.++...+ .
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~-------~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEG-------D 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEET-------T
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeC-------C
Confidence 36789999999999999999985 5799999998765432 235788999999998866555554443332 3
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE---cCCCcEEEecC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL---NEHRIAKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl---d~~~~~kl~DF 637 (766)
..++||||+ +|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||+ +.++.+||+||
T Consensus 77 ~~~lvme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEEEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 689999999 999999997533 3489999999999999999999997 89999999999999 68899999999
Q ss_pred CCCcccccccccc--------cCCCCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhc
Q 004232 638 GLSIVSEDINSVG--------GKQEDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNS 701 (766)
Q Consensus 638 Gla~~~~~~~~~~--------~~~~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~ 701 (766)
|+++......... .....+. ....++.++|||||||++|||++|+.||...... ....+..+..
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE 230 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh
Confidence 9997654322110 0000110 1123455789999999999999999998753221 1111211111
Q ss_pred ccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHhhc
Q 004232 702 QEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWNLQYAAQVQ 757 (766)
Q Consensus 702 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~L~~~~~~~ 757 (766)
.. .....+. +....+ ..+.+++.+||+.||.+||++.+|+++|+.+...+
T Consensus 231 ~~-~~~~~~~-l~~~~p----~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 231 KK-VATSIEA-LCRGYP----TEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HH-HHSCHHH-HHTTSC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred cc-ccccHHH-HhcCCc----HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 10 0000000 001111 24788999999999999999999999999886543
No 212
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-34 Score=314.64 Aligned_cols=244 Identities=22% Similarity=0.322 Sum_probs=181.5
Q ss_pred hcCCCcCCceecCCceeEEEEEe----cCCceEEEEEccCCh----hhhHHHHHHHHHHHHhC-CCCCcccccceeecCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL----ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGG 552 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~ 552 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46789999999999999999986 478999999986532 22345677899999999 6999999999988753
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcE
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIA 632 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~ 632 (766)
..++||||+++|+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+
T Consensus 133 --------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 133 --------KLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp --------EEEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred --------eEEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 6899999999999999997653 388999999999999999999997 89999999999999999999
Q ss_pred EEecCCCCccccccccc-----ccCC-C-CCCcc----cCCCCCCCEeehhHHHHHHhcCCCccccCcc--chHHHHhhh
Q 004232 633 KLSDYGLSIVSEDINSV-----GGKQ-E-DPNSW----EMTKLEDDVFSFGFMLLESVAGPSVAARKGQ--FLQEELDSL 699 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~-----~~~~-~-~~~~~----~~~~~~~DV~SfGvil~ElltG~~p~~~~~~--~~~~~~~~~ 699 (766)
||+|||+++........ .++. . .|... ..++.++|||||||++|||+||+.||..... ........+
T Consensus 199 kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 278 (355)
T 1vzo_A 199 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRI 278 (355)
T ss_dssp EESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHH
T ss_pred EEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHH
Confidence 99999998654221110 1111 0 11111 2245678999999999999999999864321 111111111
Q ss_pred hcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHHH
Q 004232 700 NSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRP-----SFEDILWNL 750 (766)
Q Consensus 700 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~ev~~~L 750 (766)
... . +......+ ..+.+++.+||+.||.+|| +++|+++..
T Consensus 279 ~~~--~-----~~~~~~~~----~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 279 LKS--E-----PPYPQEMS----ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHC--C-----CCCCTTSC----HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred hcc--C-----CCCCcccC----HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 110 0 11111111 2367899999999999999 899987653
No 213
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.7e-34 Score=301.53 Aligned_cols=247 Identities=19% Similarity=0.302 Sum_probs=171.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.++...++.++||||+++++++.+.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~------ 79 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG------ 79 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC------
Confidence 46788899999999999999996 578999999997542 222344455555688899999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..++||||++ |+|.+++... .....+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+||
T Consensus 80 --~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 80 --DVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp --SEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred --CEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeec
Confidence 6899999998 5887776541 1234589999999999999999999985 27999999999999999999999999
Q ss_pred CCCcccccccccc---cCC--CCCC------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 638 GLSIVSEDINSVG---GKQ--EDPN------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 638 Gla~~~~~~~~~~---~~~--~~~~------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
|++.......... ++. ..|. ....++.++|||||||++|||+||+.|+......... +....... ..
T Consensus 155 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~-~~ 232 (290)
T 3fme_A 155 GISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ-LKQVVEEP-SP 232 (290)
T ss_dssp ---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH-HHHHHHSC-CC
T ss_pred CCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH-HHHHhccC-CC
Confidence 9986543321111 111 0111 1123455789999999999999999998743322211 11111111 11
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.... ...+ ..+.+++.+||+.||.+|||+.||++.
T Consensus 233 ~~~~----~~~~----~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 233 QLPA----DKFS----AEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp CCCT----TTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred Cccc----ccCC----HHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1111 0111 236789999999999999999999873
No 214
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.6e-34 Score=307.83 Aligned_cols=242 Identities=22% Similarity=0.338 Sum_probs=178.2
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--------hhHHHHHHHHHHHHhCCCCCcccccceeecCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--------YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGG 552 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~ 552 (766)
.++|.+.+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 356889999999999999999864 688999999865321 2234588999999999999999999998653
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC--
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-- 630 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-- 630 (766)
..++||||+++|+|.+++... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++
T Consensus 88 --------~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 88 --------DYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp --------SEEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSS
T ss_pred --------ceEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCC
Confidence 479999999999999988654 3488999999999999999999997 899999999999998765
Q ss_pred -cEEEecCCCCccccccccc----ccCC-CCCCc-----ccCCCCCCCEeehhHHHHHHhcCCCccccCcc--chHHHHh
Q 004232 631 -IAKLSDYGLSIVSEDINSV----GGKQ-EDPNS-----WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ--FLQEELD 697 (766)
Q Consensus 631 -~~kl~DFGla~~~~~~~~~----~~~~-~~~~~-----~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~--~~~~~~~ 697 (766)
.+||+|||++......... +... ..|.. ...++.++|||||||++|||++|..||..... .....+.
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 233 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 233 (322)
T ss_dssp CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHH
T ss_pred CeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHH
Confidence 4999999999765432110 1111 11111 23456689999999999999999999864322 1111111
Q ss_pred hhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 698 SLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 698 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ... .. .+......+ ..+.+++.+||+.||.+||++.|+++
T Consensus 234 ~----~~~-~~-~~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 S----GKY-NF-IPEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp H----TCC-CC-CHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred h----Ccc-cc-CchhhhhcC----HHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 100 00 011111111 24678999999999999999999984
No 215
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.3e-34 Score=323.13 Aligned_cols=239 Identities=19% Similarity=0.258 Sum_probs=181.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh---hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
++|.+.++||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~------ 258 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT------ 258 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS------
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC------
Confidence 67888899999999999999974 699999999965432 23567889999999999999999999988753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTP-GKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
.+|+||||+++|+|.+++..... ...+++.....++.||+.||+|||+. +|+||||||+|||++.++++||+||
T Consensus 259 --~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 259 --DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp --EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred --EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeec
Confidence 78999999999999999876432 23588999999999999999999997 8999999999999999999999999
Q ss_pred CCCccccccccc----ccCCCC--C--CcccCCCCCCCEeehhHHHHHHhcCCCccccCcc--chHHHHhhhhcccCccc
Q 004232 638 GLSIVSEDINSV----GGKQED--P--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ--FLQEELDSLNSQEGRQR 707 (766)
Q Consensus 638 Gla~~~~~~~~~----~~~~~~--~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~--~~~~~~~~~~~~~~~~~ 707 (766)
|+++........ .++..+ | .....++.++|||||||++|||+||+.||..... ........+... ...
T Consensus 334 Gla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~ 411 (543)
T 3c4z_A 334 GLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVT 411 (543)
T ss_dssp TTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCC
T ss_pred ceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccC
Confidence 999765332211 111110 1 1113456788999999999999999999975321 111111111111 111
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
+ | ...+ ..+.+++.+|++.||.+||++
T Consensus 412 ~--p---~~~s----~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 412 Y--P---DKFS----PASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp C--C---TTSC----HHHHHHHHHHSCSSGGGSCCC
T ss_pred C--C---cccC----HHHHHHHHHhccCCHhHCCCC
Confidence 1 1 1111 236789999999999999976
No 216
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=307.65 Aligned_cols=258 Identities=22% Similarity=0.372 Sum_probs=186.4
Q ss_pred CHHHHHHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecC
Q 004232 474 TLEELKEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDG 551 (766)
Q Consensus 474 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~ 551 (766)
+++++....++|++.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++...
T Consensus 15 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp -CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred cchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3344455678899999999999999999996 4789999999865432 346788999999999 799999999999874
Q ss_pred CCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc
Q 004232 552 GGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI 631 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~ 631 (766)
... ......++||||+++|+|.+++.... ...+++.....++.+++.||+|||+. +|+||||||+||+++.++.
T Consensus 94 ~~~--~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 94 NPP--GMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp C----CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred cCc--cccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 210 00146899999999999999997643 23488999999999999999999997 8999999999999999999
Q ss_pred EEEecCCCCccccccccc-----ccCC-CCCCc-------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhh
Q 004232 632 AKLSDYGLSIVSEDINSV-----GGKQ-EDPNS-------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDS 698 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~-----~~~~-~~~~~-------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~ 698 (766)
+||+|||++......... +... ..|.. ...++.++|||||||++|||+||+.|+...... .....
T Consensus 168 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~ 245 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--RALFL 245 (326)
T ss_dssp EEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHH
T ss_pred EEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHH
Confidence 999999998654321110 1000 01110 234567899999999999999999998643321 11111
Q ss_pred hhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 699 LNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 699 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
+... ....... ...+ ..+.+++.+||+.||.+||++.|+++.
T Consensus 246 ~~~~-~~~~~~~----~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 246 IPRN-PAPRLKS----KKWS----KKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHS-CCCCCSC----SCSC----HHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhcC-ccccCCc----cccC----HHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111 1111111 1111 236788999999999999999999873
No 217
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.6e-34 Score=309.10 Aligned_cols=248 Identities=19% Similarity=0.343 Sum_probs=180.5
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh-hhhHHHHHHHHHH-HHhCCCCCcccccceeecCCCCCCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK-KYTVRNLKLRLDL-LAKLRHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~e~~~-l~~l~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+++..|+.+ ++.++||||+++++++.+.+
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~----- 123 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG----- 123 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----
Confidence 356788899999999999999985 579999999997542 2334455556555 77889999999999998753
Q ss_pred CcceEEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++ +|.+++... .....+++..+..++.||+.||+|||+. .+|+||||||+||+++.++.+||+|
T Consensus 124 ---~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 124 ---DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp ---CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECC
T ss_pred ---cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEee
Confidence 68999999985 998887642 1234589999999999999999999974 2799999999999999999999999
Q ss_pred CCCCcccccccc----cccCCC-CCC------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINS----VGGKQE-DPN------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~----~~~~~~-~~~------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++....... .++... .|. ....++.++|||||||++|||+||+.||....... ..+....... .
T Consensus 198 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~-~ 275 (340)
T 3an0_A 198 FGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-QQLKQVVEEP-S 275 (340)
T ss_dssp CSHHHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-HHHHHHHHSC-C
T ss_pred CCCceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-HHHHHHhcCC-C
Confidence 999865432211 111110 111 11234567899999999999999999987433221 1122211111 1
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...... .. ...+.+++.+||+.||.+||++.||++.
T Consensus 276 ~~~~~~----~~----~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 PQLPAD----KF----SAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CCCCGG----GS----CHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCcc----cC----CHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111110 11 1237789999999999999999999874
No 218
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.1e-34 Score=310.57 Aligned_cols=253 Identities=17% Similarity=0.236 Sum_probs=183.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhh-----------------HHHHHHHHHHHHhCCCCCcccc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYT-----------------VRNLKLRLDLLAKLRHPHLVCL 544 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~-----------------~~~~~~e~~~l~~l~Hpniv~l 544 (766)
.++|++.+.||+|+||.||+|+. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 89999999986432211 2789999999999999999999
Q ss_pred cceeecCCCCCCcCcceEEEEEEccCCCChhhh------hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccC
Q 004232 545 LGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTH------ISENTPGKVLNWSERLAVLIGVAKAVQFLHT-GVIPGFFNN 617 (766)
Q Consensus 545 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHr 617 (766)
++++.+.+ ..++||||+++|+|.++ +.+.. ...+++..+..++.+++.||+|||+ . +|+||
T Consensus 109 ~~~~~~~~--------~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~ 176 (348)
T 2pml_X 109 EGIITNYD--------EVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHR 176 (348)
T ss_dssp SEEEESSS--------EEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECC
T ss_pred EEEEeeCC--------eEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeec
Confidence 99998753 78999999999999998 54321 3458999999999999999999998 6 89999
Q ss_pred CCCCCceEEcCCCcEEEecCCCCcccccccccc--cC--CCCCCccc---CCCC-CCCEeehhHHHHHHhcCCCccccCc
Q 004232 618 RVKTNNILLNEHRIAKLSDYGLSIVSEDINSVG--GK--QEDPNSWE---MTKL-EDDVFSFGFMLLESVAGPSVAARKG 689 (766)
Q Consensus 618 dlk~~NILld~~~~~kl~DFGla~~~~~~~~~~--~~--~~~~~~~~---~~~~-~~DV~SfGvil~ElltG~~p~~~~~ 689 (766)
||||+||+++.++.+||+|||++.......... ++ ...|.... .+.. ++|||||||++|||+||+.|+....
T Consensus 177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999996643221110 00 01111111 1223 7899999999999999999987433
Q ss_pred cchHHHHhhhhcccCc-c----ccccccccC---CCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 690 QFLQEELDSLNSQEGR-Q----RLVDPVVMA---TSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 690 ~~~~~~~~~~~~~~~~-~----~~~d~~~~~---~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. ......+...... . ....+.... .........+.+++.+||+.||.+||++.|+++
T Consensus 257 ~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 257 SL-VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp CS-HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cH-HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 21 1112222111100 0 000000000 000111234778999999999999999999986
No 219
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=301.51 Aligned_cols=243 Identities=22% Similarity=0.341 Sum_probs=179.1
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
..+.|++.+.||+|+||.||+|+.. +|+.||||.+.... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT------- 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-------
Confidence 4567999999999999999999865 58999999987543 3467889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.... ..+++..+..++.+++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 98 -~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 98 -DLWIVMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp -EEEEEEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred -EEEEEeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 6899999999999999986432 3488999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccccc----C----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccc
Q 004232 640 SIVSEDINSVGG----K----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDP 711 (766)
Q Consensus 640 a~~~~~~~~~~~----~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 711 (766)
+........... + .++......++.++|||||||++|||++|+.|+...... .....+.. ........+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~-~~~~~~~~~ 248 (314)
T 3com_A 172 AGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM--RAIFMIPT-NPPPTFRKP 248 (314)
T ss_dssp CEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHH-SCCCCCSSG
T ss_pred chhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHhc-CCCcccCCc
Confidence 865433211100 0 011011123567899999999999999999998643321 11111111 111111111
Q ss_pred cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 712 VVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 712 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.. .+ ..+.+++.+||+.||.+||++.|+++
T Consensus 249 ~~---~~----~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 249 EL---WS----DNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GG---SC----HHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cc---CC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11 11 23678999999999999999999976
No 220
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.9e-33 Score=307.34 Aligned_cols=255 Identities=18% Similarity=0.242 Sum_probs=180.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++++++||||+++++++...+... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~--~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE--E 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT--T
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc--c
Confidence 36788999999999999999985 46899999998653 3344677889999999999999999999987653211 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++||||+++ +|.+.+.. .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 1368999999985 78887752 278999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc----cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC-------
Q 004232 639 LSIVSEDINSV----GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG------- 704 (766)
Q Consensus 639 la~~~~~~~~~----~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~------- 704 (766)
+++........ ++ ..++......++.++|||||||++|||+||+.||...... ..+..+.....
T Consensus 173 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 173 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp C----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHC-CCCCCHHHH
T ss_pred cccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHH
Confidence 99754332111 11 1111111234567899999999999999999998743321 11111111000
Q ss_pred -------------ccc--------cccccccCCCC---HHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 -------------RQR--------LVDPVVMATSS---LESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 -------------~~~--------~~d~~~~~~~~---~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... .......+... ......+.+|+.+|++.||.+|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 00000000001 1123568899999999999999999999875
No 221
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.9e-34 Score=317.69 Aligned_cols=258 Identities=16% Similarity=0.229 Sum_probs=177.0
Q ss_pred cCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcceE
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+|.+.++||+|+||+||+|+...+..||+|++..... ...+|+++++.++|||||++++++...+... .....
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~--~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKK--DEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSS--SCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCC--CceEE
Confidence 45888999999999999999987777799998865432 2246899999999999999999987654211 11347
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CCCcEEEecCCCCc
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKLSDYGLSI 641 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl~DFGla~ 641 (766)
++||||++++.+............+++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999999865544332221224588999999999999999999997 899999999999999 79999999999997
Q ss_pred ccccccccc---cCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhccc---------
Q 004232 642 VSEDINSVG---GKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQE--------- 703 (766)
Q Consensus 642 ~~~~~~~~~---~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~--------- 703 (766)
......... ++. ..|. ....++.++|||||||++|||++|+.||....... ...+.......
T Consensus 191 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 191 ILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp ECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred cccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 643221111 110 0111 11235678899999999999999999997543211 11111110000
Q ss_pred -CccccccccccCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 -GRQRLVDPVVMATS-----SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 -~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......-+...... .......+.+|+.+||+.||.+|||+.|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000000000 00012347899999999999999999999764
No 222
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.4e-34 Score=310.19 Aligned_cols=258 Identities=17% Similarity=0.312 Sum_probs=169.5
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++++++||||+++++++....... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~--~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE--E 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG--G
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc--c
Confidence 36788899999999999999984 57899999999653 3345678889999999999999999999987642111 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 13579999999 6899988864 2489999999999999999999997 89999999999999999999999999
Q ss_pred CCcccccccc--cccCCC-CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccC---cccc
Q 004232 639 LSIVSEDINS--VGGKQE-DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEG---RQRL 708 (766)
Q Consensus 639 la~~~~~~~~--~~~~~~-~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~---~~~~ 708 (766)
+++....... .++... .|. ....++.++|||||||++|||+||+.||....... ...+........ ...+
T Consensus 178 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~ 257 (367)
T 2fst_X 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTC
T ss_pred ccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 9976433211 111110 111 11346678999999999999999999987433211 111111100000 0000
Q ss_pred c--------ccc-ccCCCCHH-----HHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 V--------DPV-VMATSSLE-----SLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~--------d~~-~~~~~~~~-----~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. ... ........ .-..+.+|+.+|++.||.+|||+.|+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 000 00000000 11347899999999999999999999764
No 223
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.7e-33 Score=313.59 Aligned_cols=268 Identities=22% Similarity=0.261 Sum_probs=179.0
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccC-CccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSL-PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
++.|...+..|..++++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++
T Consensus 37 Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 116 (455)
T 3v47_A 37 LSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLD 116 (455)
T ss_dssp CCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCB
T ss_pred ecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCC
Confidence 4444444444556666666666666666665444 345666666666666666666666666666666666666666666
Q ss_pred CCCCcc--cCCCCCCCEEEccCccCCCCCCcc-ccCCCCCCEEEccCCccCCCCCC-C----------------------
Q 004232 180 NTIPNW--FDSLPSLTFLSMRNNKLAGPFPSS-IQRISTLSDLDLSKNAISGSLPD-L---------------------- 233 (766)
Q Consensus 180 ~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~-~---------------------- 233 (766)
+.+|.. |+++++|++|+|++|++++..|.. +.++++|++|+|++|.+++..|. +
T Consensus 117 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~ 196 (455)
T 3v47_A 117 GAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMN 196 (455)
T ss_dssp THHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCS
T ss_pred ccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccc
Confidence 544433 666666666666666666655554 56666666666666666654442 1
Q ss_pred ------------CCCCCCCEEECCCCCCCCCCCC------------------------------------------CCCC
Q 004232 234 ------------SSLGSLNVLNLSDNKLDSNLPK------------------------------------------LPRG 259 (766)
Q Consensus 234 ------------~~l~~L~~L~ls~N~l~~~~p~------------------------------------------~~~~ 259 (766)
..+++|++|++++|++++..|. ....
T Consensus 197 ~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (455)
T 3v47_A 197 EYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASG 276 (455)
T ss_dssp TTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSC
T ss_pred hhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccC
Confidence 1335677777777766532110 0135
Q ss_pred CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcC
Q 004232 260 LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (766)
Q Consensus 260 l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~ 339 (766)
++.+++++|++++.+|..|+.+++|+.|++++|++++.+|..|..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 77777777777777777777788888888888888877777777778888888888887777677777777788888888
Q ss_pred CccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 340 NKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 340 N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
|++++..|..+..+++|+.|++++|.+++
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcccccChhhccccccccEEECCCCcccc
Confidence 88877777777777778888888877775
No 224
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.9e-34 Score=315.82 Aligned_cols=257 Identities=17% Similarity=0.215 Sum_probs=176.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcce
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVNK 561 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~~ 561 (766)
.+|++.+.||+|+||+||+|+.. +|+.||||++..... ...+|+++|++++|||||+++++|...+... ....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~--~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKK--DEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTT--TEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCC--ccee
Confidence 35888899999999999999974 699999999865432 2347999999999999999999986543111 1124
Q ss_pred EEEEEEccCCCChhhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC-CcEEEecCCC
Q 004232 562 VFLVYEFMSNGNFRTHISEN-TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH-RIAKLSDYGL 639 (766)
Q Consensus 562 ~~lv~Ey~~~GsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~-~~~kl~DFGl 639 (766)
+++||||+++ ++.+.+... .....+++.....++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999996 565554321 1224589999999999999999999997 89999999999999955 6789999999
Q ss_pred Cccccccccc---ccCC-C-CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccc-hHHHHhhhhcc--------
Q 004232 640 SIVSEDINSV---GGKQ-E-DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF-LQEELDSLNSQ-------- 702 (766)
Q Consensus 640 a~~~~~~~~~---~~~~-~-~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~-~~~~~~~~~~~-------- 702 (766)
++........ .++. . .|. ....++.++|||||||++|||++|+.||...... ....+......
T Consensus 204 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 204 AKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp CEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred hhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 9754322111 1111 0 111 1124567889999999999999999999753321 11111110000
Q ss_pred --cCccccccccccCCC-----CHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 --EGRQRLVDPVVMATS-----SLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 --~~~~~~~d~~~~~~~-----~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....++..+.+.... .......+.+|+.+||+.||.+||++.|+++.
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 001111111111000 00112347899999999999999999999754
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=6.5e-34 Score=309.58 Aligned_cols=268 Identities=18% Similarity=0.211 Sum_probs=173.5
Q ss_pred HHHHHHhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCC
Q 004232 476 EELKEATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 476 ~~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~ 554 (766)
++.....++|++.+.||+|+||.||+|+.. +|+.||||++..... ....+.+|++.++.++||||+++++++...+..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 445667889999999999999999999964 689999998865432 224556778888999999999999999764321
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCCcccCCCCCCceEEcC-CC
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISE-NTPGKVLNWSERLAVLIGVAKAVQFLH--TGVIPGFFNNRVKTNNILLNE-HR 630 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrdlk~~NILld~-~~ 630 (766)
+ ......++||||++++ +...+.. ......+++.....++.+++.||.||| +. +|+||||||+|||++. ++
T Consensus 95 ~-~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 95 D-RRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp C-TTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred c-ccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 1 0112478999999974 4433322 122345788999999999999999999 65 8999999999999996 89
Q ss_pred cEEEecCCCCccccccccccc---CC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhc
Q 004232 631 IAKLSDYGLSIVSEDINSVGG---KQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNS 701 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~~~~---~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~ 701 (766)
.+||+|||++........... +. ..|. ....++.++|||||||++|||+||+.||....... ...+.....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 249 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249 (360)
T ss_dssp EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC
T ss_pred cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC
Confidence 999999999976543221111 10 0111 11235678899999999999999999987543211 111111000
Q ss_pred c------------cCcccccccc------ccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 702 Q------------EGRQRLVDPV------VMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 702 ~------------~~~~~~~d~~------~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
. .......+.. ............+.+|+.+||+.||.+|||+.||++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 0000000000 0000011123457899999999999999999999864
No 226
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.6e-33 Score=298.05 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=179.7
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChh--hhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------- 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN------- 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-------
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-------
Confidence 57888999999999999999865 789999999865432 22467889999999999999999999998753
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||++ |+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 -~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 76 -KLYLVFEFLH-QDLKKFMDASAL-TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp -EEEEEEECCS-EEHHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred -ceEEEEEccc-CCHHHHHHhhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 7899999998 699998876532 3478999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc----ccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc-cCccc--
Q 004232 640 SIVSEDINSV----GGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ-EGRQR-- 707 (766)
Q Consensus 640 a~~~~~~~~~----~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~-~~~~~-- 707 (766)
+......... ..+. ..|.. ....+.++|||||||++|||+||+.||...... +....+... +....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 227 (299)
T 2r3i_A 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVV 227 (299)
T ss_dssp HHHHCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTT
T ss_pred hhhccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCchhh
Confidence 8654321111 0010 01111 112566889999999999999999998754321 111111110 00000
Q ss_pred ------c--ccccccC--CCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 708 ------L--VDPVVMA--TSSL-----ESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 708 ------~--~d~~~~~--~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ..+.... .... .....+.+++.+|++.||++|||+.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 0000000 0000 01134678999999999999999999976
No 227
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=297.75 Aligned_cols=244 Identities=19% Similarity=0.278 Sum_probs=180.7
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh----hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK----KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~ 556 (766)
.++|++.+.||+|+||.||+|.. .+++.||||.++... ....+.+.+|++++++++||||+++++++...+.
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--- 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEK--- 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCC---
Confidence 46899999999999999999986 468899999987543 2345789999999999999999999999864321
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
...++||||+++| +.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 81 ---~~~~lv~e~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 ---QKMYMVMEYCVCG-MQEMLDSVP-EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp ----CEEEEEECCSEE-HHHHHHHST-TCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ---CeEEEEehhccCC-HHHHHHhCc-ccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 3689999999987 767665543 24589999999999999999999997 899999999999999999999999
Q ss_pred CCCCccccccccc---ccCCC-----CCCccc----CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccC
Q 004232 637 YGLSIVSEDINSV---GGKQE-----DPNSWE----MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEG 704 (766)
Q Consensus 637 FGla~~~~~~~~~---~~~~~-----~~~~~~----~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~ 704 (766)
||++......... ..... .|.... ..+.++|||||||++|||++|+.|+..... ......+...
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~-- 228 (305)
T 2wtk_C 153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIGKG-- 228 (305)
T ss_dssp CTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHC--
T ss_pred cccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHhcC--
Confidence 9998654321100 00000 111111 114478999999999999999999874332 2222222111
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 RQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ ....+ ..+.+++.+||+.||.+|||++|+++.
T Consensus 229 ~~~~-----~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 229 SYAI-----PGDCG----PPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCCC-----CSSSC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCC-----CCccC----HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111 11111 236789999999999999999999875
No 228
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=8.9e-34 Score=307.51 Aligned_cols=262 Identities=16% Similarity=0.258 Sum_probs=182.1
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.++++++||||+++++++.+........
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999996 578999999986543 223456789999999999999999999998753100000
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++||||+++ ++...+.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 1368999999995 7777776442 3489999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc-----cc---CC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhhhcccC
Q 004232 639 LSIVSEDINSV-----GG---KQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSLNSQEG 704 (766)
Q Consensus 639 la~~~~~~~~~-----~~---~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~~~~~~ 704 (766)
+++........ .. +. ..|. ....++.++|||||||++|||+||+.|+........ ..+........
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 99654321110 00 00 0111 112356788999999999999999999875432211 11111110000
Q ss_pred ---cccc-----cccc----ccCCCCHHH------HHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 705 ---RQRL-----VDPV----VMATSSLES------LSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 705 ---~~~~-----~d~~----~~~~~~~~~------~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
...+ .+.. .......+. -..+.+|+.+|++.||.+|||++|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 0000 0000 000000111 1337799999999999999999999763
No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=303.37 Aligned_cols=257 Identities=16% Similarity=0.262 Sum_probs=177.4
Q ss_pred cCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC------
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD------ 555 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~------ 555 (766)
++|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++...+..-
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888999999999999999975 58999999998776667788999999999999999999999886542100
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CCCcEEE
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EHRIAKL 634 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~~~~kl 634 (766)
.......++||||++ |+|.+++.+. .+++.....++.|++.||+|||+. +|+||||||+||+++ +++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEE
Confidence 011246899999998 6999988642 378999999999999999999997 899999999999998 5679999
Q ss_pred ecCCCCcccccccccc-------cCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc
Q 004232 635 SDYGLSIVSEDINSVG-------GKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 635 ~DFGla~~~~~~~~~~-------~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
+|||+++......... .+. ..|. ....++.++|||||||++|||+||+.||...... .....+...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~ 240 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILES 240 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHH
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence 9999997643211100 000 0111 0133456789999999999999999998743321 111111100
Q ss_pred cC------cccc-------cccccc-CCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 EG------RQRL-------VDPVVM-ATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 ~~------~~~~-------~d~~~~-~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.. ..++ ...... ..... .....+.+++.+||+.||.+|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00 0000 000000 00000 012347789999999999999999999864
No 230
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.7e-33 Score=302.76 Aligned_cols=253 Identities=16% Similarity=0.258 Sum_probs=184.0
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE---QM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT---TC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc---cc
Confidence 357899999999999999999854 68899999997543 34457889999999999999999999998765311 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 35899999998 5999988753 388999999999999999999997 899999999999999999999999999
Q ss_pred Ccccccccccc-------cCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCc-
Q 004232 640 SIVSEDINSVG-------GKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGR- 705 (766)
Q Consensus 640 a~~~~~~~~~~-------~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~- 705 (766)
+.......... ++. ..|. ....++.++|||||||++|||+||+.||....... ...+.........
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 97653321110 010 0111 11235678899999999999999999987543211 1111111000000
Q ss_pred --------------cccccc------cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 --------------QRLVDP------VVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 --------------~~~~d~------~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.....+ ...... ...+.+++.+|++.||.+|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNA----DSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTS----CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCC----CHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 000111 1347799999999999999999999863
No 231
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-33 Score=330.84 Aligned_cols=236 Identities=18% Similarity=0.299 Sum_probs=180.0
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh---hhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~ 555 (766)
..++|++.++||+|+||+||+|+.. +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~--- 415 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD--- 415 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS---
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC---
Confidence 3578999999999999999999964 68899999997532 23356678899999987 7999999999887653
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
.+|+||||+++|+|.+++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+
T Consensus 416 -----~~~lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 416 -----RLYFVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp -----EEEEEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred -----EEEEEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 7899999999999999998653 388999999999999999999997 89999999999999999999999
Q ss_pred cCCCCccccccc-cc---ccCCC----CCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccc
Q 004232 636 DYGLSIVSEDIN-SV---GGKQE----DPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQR 707 (766)
Q Consensus 636 DFGla~~~~~~~-~~---~~~~~----~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 707 (766)
|||+++...... .. .++.. +......++.++|||||||++|||+||+.||..... .+....+.... ..
T Consensus 485 DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~~--~~ 560 (674)
T 3pfq_A 485 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHN--VA 560 (674)
T ss_dssp CCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHSSC--CC
T ss_pred ecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCC--CC
Confidence 999997532111 11 11111 111123456788999999999999999999974332 22222222211 11
Q ss_pred cccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCH
Q 004232 708 LVDPVVMATSSLESLSIVISIANKCICSESWSRPSF 743 (766)
Q Consensus 708 ~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~ 743 (766)
+ | ...+ ..+.+|+.+|++.||.+||++
T Consensus 561 ~--p---~~~s----~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 561 Y--P---KSMS----KEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp C--C---TTSC----HHHHHHHHHHSCSSSTTCTTC
T ss_pred C--C---ccCC----HHHHHHHHHHccCCHHHCCCC
Confidence 1 1 1112 236789999999999999998
No 232
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2e-33 Score=312.93 Aligned_cols=193 Identities=18% Similarity=0.262 Sum_probs=154.2
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhC------CCCCcccccceeecCCCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL------RHPHLVCLLGHCIDGGGR 554 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l------~Hpniv~l~g~~~~~~~~ 554 (766)
..+|++.+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.+++.+ +|+||+++++++....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-- 172 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-- 172 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT--
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC--
Confidence 356889999999999999999854 68999999997643 3346677888888876 6779999999998753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc--E
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI--A 632 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~--~ 632 (766)
..++||||+. |+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +
T Consensus 173 ------~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 173 ------HICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp ------EEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred ------eEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 7899999997 699998876532 3489999999999999999999997 8999999999999999887 9
Q ss_pred EEecCCCCccccccccc--cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 633 KLSDYGLSIVSEDINSV--GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 633 kl~DFGla~~~~~~~~~--~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
||+|||++......... ++ ..++......++.++|||||||++|||+||+.||...
T Consensus 242 kL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 242 KVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999654322111 11 1111111234677899999999999999999998754
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.4e-33 Score=305.29 Aligned_cols=255 Identities=18% Similarity=0.283 Sum_probs=179.7
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+... .
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~--~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR--N 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST--T
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc--c
Confidence 35788899999999999999985 46899999999753 3344678889999999999999999999998754211 1
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
....++||||+. |+|.+++.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 123599999998 688887742 388999999999999999999997 89999999999999999999999999
Q ss_pred CCccccccccc-ccCCC--CCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc--C----cc
Q 004232 639 LSIVSEDINSV-GGKQE--DPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE--G----RQ 706 (766)
Q Consensus 639 la~~~~~~~~~-~~~~~--~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~--~----~~ 706 (766)
+++........ .++.. .|. ....++.++|||||||++|||+||+.||...... +....+.... . ..
T Consensus 190 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp CC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHHHT
T ss_pred cccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCcHHHHH
Confidence 99754332111 11110 111 1134667899999999999999999999743321 1111110000 0 00
Q ss_pred cccc--------cc-ccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 RLVD--------PV-VMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ~~~d--------~~-~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+.+ .. ....... .....+.+++.+|++.||.+|||+.|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 00 0000000 012347899999999999999999999764
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-33 Score=296.54 Aligned_cols=245 Identities=18% Similarity=0.289 Sum_probs=183.7
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 94 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS------ 94 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS------
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC------
Confidence 457899999999999999999965 78999999986432 234678899999999999999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC---CcEEEe
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---RIAKLS 635 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---~~~kl~ 635 (766)
..++||||+++++|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||+++.+ +.+||+
T Consensus 95 --~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~ 166 (287)
T 2wei_A 95 --SFYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166 (287)
T ss_dssp --EEEEEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred --eEEEEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEe
Confidence 7899999999999999887543 388999999999999999999997 89999999999999754 479999
Q ss_pred cCCCCccccccccccc---C-C-CCCC-cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccc
Q 004232 636 DYGLSIVSEDINSVGG---K-Q-EDPN-SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLV 709 (766)
Q Consensus 636 DFGla~~~~~~~~~~~---~-~-~~~~-~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 709 (766)
|||++........... + . ..|. ....++.++|||||||++|||++|+.|+...... .....+.... ....
T Consensus 167 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~--~~~~ 242 (287)
T 2wei_A 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGK--YAFD 242 (287)
T ss_dssp STTGGGTBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCC--CCCC
T ss_pred ccCcceeecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCC--CCCC
Confidence 9999865433211110 0 0 0111 0123567889999999999999999998643321 1122221111 0111
Q ss_pred cccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 710 DPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 710 d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+.. ...+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 243 ~~~~-~~~~----~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 243 LPQW-RTIS----DDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp SGGG-TTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred chhh-hhcC----HHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 1110 1112 236789999999999999999999874
No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.2e-33 Score=297.10 Aligned_cols=251 Identities=19% Similarity=0.279 Sum_probs=179.6
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCC-----
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRD----- 555 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~----- 555 (766)
.++|++.+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+.++++++||||+++++++.+...-.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 46788999999999999999996 47999999998653 344578899999999999999999999987642100
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEe
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLS 635 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~ 635 (766)
.......++||||+++|+|.+++.... ..+++.....++.+++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 001246899999999999999997643 3477889999999999999999997 89999999999999999999999
Q ss_pred cCCCCcccccccc------------------cccCC--CCCCc---ccCCCCCCCEeehhHHHHHHhcCCCccccCccch
Q 004232 636 DYGLSIVSEDINS------------------VGGKQ--EDPNS---WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL 692 (766)
Q Consensus 636 DFGla~~~~~~~~------------------~~~~~--~~~~~---~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~ 692 (766)
|||++........ ..++. ..|.. ...++.++|||||||++|||++ |+.. ....
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~-~~~~ 234 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST-GMER 234 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS-HHHH
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC-chhH
Confidence 9999865432100 00000 01111 1235668899999999999999 3321 1111
Q ss_pred HHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 693 QEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 693 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
......+... ...+ .+... ......+.+++.+||+.||.+|||+.|+++.
T Consensus 235 ~~~~~~~~~~--~~~~-~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 VNILKKLRSV--SIEF-PPDFD----DNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHST--TCCC-CTTCC----TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHhcccc--cccc-Ccccc----ccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111111110 0111 11111 1112346789999999999999999999863
No 236
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=7.2e-34 Score=303.08 Aligned_cols=243 Identities=17% Similarity=0.268 Sum_probs=180.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCC--CCCcccccceeecCCCCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDD 556 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~--Hpniv~l~g~~~~~~~~~~ 556 (766)
..++|++.+.||+|+||.||+|+..+++.||||++... .....+.+.+|++++++++ ||||+++++++.+.+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~---- 101 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---- 101 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS----
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC----
Confidence 35678999999999999999999888999999998643 3445678999999999997 599999999998753
Q ss_pred cCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 557 YAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||| +.+|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||++++ +.+||+|
T Consensus 102 ----~~~lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 102 ----YIYMVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp ----EEEEEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECC
T ss_pred ----EEEEEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEee
Confidence 6899999 67889999997653 488999999999999999999997 8999999999999975 8999999
Q ss_pred CCCCccccccccc-------ccCC-CCCCc-------------ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHH
Q 004232 637 YGLSIVSEDINSV-------GGKQ-EDPNS-------------WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEE 695 (766)
Q Consensus 637 FGla~~~~~~~~~-------~~~~-~~~~~-------------~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~ 695 (766)
||++......... +... ..|.. ...++.++|||||||++|||+||+.||....... ..
T Consensus 170 fg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~ 248 (313)
T 3cek_A 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-SK 248 (313)
T ss_dssp CSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-HH
T ss_pred ccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-HH
Confidence 9999654322110 0000 01111 0234557899999999999999999986432211 11
Q ss_pred HhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 696 LDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 696 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
............+ + ...+ ..+.+++.+||+.||.+||++.||++.
T Consensus 249 ~~~~~~~~~~~~~--~---~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 249 LHAIIDPNHEIEF--P---DIPE----KDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHHHCTTSCCCC--C---CCSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhcccccCC--c---ccch----HHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1211111111111 1 1111 236788999999999999999999875
No 237
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=312.33 Aligned_cols=191 Identities=18% Similarity=0.336 Sum_probs=139.7
Q ss_pred CCc-CCceecCCceeEEEEEec---CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 485 FDM-SAIMGEGSYGKLYKGRLE---NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 485 f~~-~~~lG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
|++ .++||+|+||+||+|+.. +++.||||++..... .+.+.+|+.+|++++|||||++++++.+... .
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------~ 93 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHAD------R 93 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTT------T
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCC------C
Confidence 554 458999999999999965 578999999975432 2467899999999999999999999975431 3
Q ss_pred eEEEEEEccCCCChhhhhhcCC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE----cCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENT------PGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL----NEHR 630 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl----d~~~ 630 (766)
..++||||+++ +|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 68999999985 7877765321 122488999999999999999999997 89999999999999 6778
Q ss_pred cEEEecCCCCcccccccc-------cccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCcccc
Q 004232 631 IAKLSDYGLSIVSEDINS-------VGGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAAR 687 (766)
Q Consensus 631 ~~kl~DFGla~~~~~~~~-------~~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~ 687 (766)
.+||+|||+++....... ..++. ..|. ....++.++|||||||++|||+||+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 999999999976432111 00010 0111 012356678999999999999999999864
No 238
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6.1e-33 Score=297.49 Aligned_cols=260 Identities=19% Similarity=0.245 Sum_probs=179.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEe--cCCceEEEEEccCChh--hhHHHHHHHHHHHHhC---CCCCcccccceeecCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSKK--YTVRNLKLRLDLLAKL---RHPHLVCLLGHCIDGGG 553 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~~~~e~~~l~~l---~Hpniv~l~g~~~~~~~ 553 (766)
+.++|++.+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+.+++.+ +||||++++++|.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 4688999999864321 1223456677766665 89999999999873210
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEE
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAK 633 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~k 633 (766)
. .....++||||++ |+|.+++..... ..+++..+..++.+++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 89 ~---~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 D---RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp S---SEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred C---CCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 0 1136899999999 699999876532 3488999999999999999999997 899999999999999999999
Q ss_pred EecCCCCcccccccccccCCC-----CC--CcccCCCCCCCEeehhHHHHHHhcCCCccccCccch-HHHHhhhhcccCc
Q 004232 634 LSDYGLSIVSEDINSVGGKQE-----DP--NSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFL-QEELDSLNSQEGR 705 (766)
Q Consensus 634 l~DFGla~~~~~~~~~~~~~~-----~~--~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~-~~~~~~~~~~~~~ 705 (766)
|+|||++.............. .| .....++.++|||||||++|||+||+.||....... ...+.........
T Consensus 161 l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 161 LADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp ECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred EecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 999999865432211111000 11 112345678899999999999999999987433211 1111111000000
Q ss_pred cccc----cc--cc-------cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 706 QRLV----DP--VV-------MATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 706 ~~~~----d~--~~-------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
..+. .+ .. ...........+.+++.+||+.||.+||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000 00 00 00000011134678999999999999999999985
No 239
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.4e-33 Score=301.83 Aligned_cols=253 Identities=17% Similarity=0.247 Sum_probs=183.0
Q ss_pred cCCCcCCceecCCceeEEEEEe--cCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCC------cccccceeecCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL--ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH------LVCLLGHCIDGGGR 554 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpn------iv~l~g~~~~~~~~ 554 (766)
++|++.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++++++|+| ++++++++.+.+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~-- 90 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG-- 90 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT--
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC--
Confidence 5788999999999999999985 368899999997643 34567889999999887665 999999988753
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC------
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE------ 628 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~------ 628 (766)
..++||||+ +|+|.+++.+.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 91 ------~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 159 (339)
T 1z57_A 91 ------HICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEA 159 (339)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ------cEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccc
Confidence 789999999 889999987653 23588999999999999999999997 8999999999999987
Q ss_pred -------------CCcEEEecCCCCccccccccc--cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc
Q 004232 629 -------------HRIAKLSDYGLSIVSEDINSV--GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ 690 (766)
Q Consensus 629 -------------~~~~kl~DFGla~~~~~~~~~--~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~ 690 (766)
++.+||+|||++......... +. ..++......++.++|||||||++|||+||+.||.....
T Consensus 160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 160 YNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp EC----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred cCCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999764332211 11 111111123456789999999999999999999875332
Q ss_pred ch-HHHHhhhhccc--------Ccccccc---------------------ccc-cCCCCHHHHHHHHHHHHHhccCCCCC
Q 004232 691 FL-QEELDSLNSQE--------GRQRLVD---------------------PVV-MATSSLESLSIVISIANKCICSESWS 739 (766)
Q Consensus 691 ~~-~~~~~~~~~~~--------~~~~~~d---------------------~~~-~~~~~~~~~~~~~~l~~~C~~~~p~~ 739 (766)
.. ...+....... ....... +.. ...........+.+++.+||+.||.+
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 11 11111110000 0000000 000 00111233456889999999999999
Q ss_pred CCCHHHHHHH
Q 004232 740 RPSFEDILWN 749 (766)
Q Consensus 740 RPs~~ev~~~ 749 (766)
|||+.||++.
T Consensus 320 Rpt~~ell~h 329 (339)
T 1z57_A 320 RITLREALKH 329 (339)
T ss_dssp SCCHHHHTTS
T ss_pred ccCHHHHhcC
Confidence 9999999753
No 240
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.8e-33 Score=301.83 Aligned_cols=276 Identities=19% Similarity=0.223 Sum_probs=155.2
Q ss_pred CChHHHHHHHHHHHcC-CCCC-CCCCcc---CCCCCCCCCCCCCccceEecCCCEEEEEeCCCCCCCCCCCCcccccccc
Q 004232 26 LQSSQTQVLLQLRKHL-EYPK-QLEIWI---NHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNVGNFDGFASANAS 100 (766)
Q Consensus 26 ~~~~~~~aLl~~k~~~-~~~~-~l~~W~---~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~ 100 (766)
+..+|++||++||+++ .++. .+++|. ..+.++|.|. |+.|.... . .
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~------------------~------~ 74 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATA------------------D------L 74 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHH------------------H------H
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhH------------------H------H
Confidence 4568999999999987 3553 457884 3336789874 68884100 0 0
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
+ .-...++++.|+|++|.+. .+|+.++++++|++|+|++|.++ .+|..++++++|++|+|++|.++
T Consensus 75 l-----------~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~- 140 (328)
T 4fcg_A 75 L-----------EDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR- 140 (328)
T ss_dssp H-----------HHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-
T ss_pred H-----------hcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-
Confidence 0 0012344555566665554 45555555666666666666655 55555566666666666666655
Q ss_pred CCCcccCCCCCCCEEEccCccCCCCCCccccC---------CCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCC
Q 004232 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQR---------ISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDS 251 (766)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~ 251 (766)
.+|..++++++|++|+|++|++.+.+|..+.. +++|++|+|++|.++..++.+..+++|++|++++|++++
T Consensus 141 ~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 141 ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC
T ss_pred cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc
Confidence 45555666666666666665555555555443 666666666666665333335555666666555554442
Q ss_pred CCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCC
Q 004232 252 NLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGK 331 (766)
Q Consensus 252 ~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~ 331 (766)
+|..++.+++|+.|++++|++.+.+|..+..+++|+.|+|++|++.+.+|..+..+++
T Consensus 221 ----------------------l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 278 (328)
T 4fcg_A 221 ----------------------LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQ 278 (328)
T ss_dssp ----------------------CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTT
T ss_pred ----------------------CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCC
Confidence 2334445555555555555555555555555555555555555555555555555555
Q ss_pred ccEEeCcCCccccCCCCCCCCCCCCceeecCCCcC
Q 004232 332 LVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCL 366 (766)
Q Consensus 332 L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l 366 (766)
|+.|+|++|++.+.+|..+..+++++.+.+..|.+
T Consensus 279 L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 279 LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 55555555555555555555555555555554433
No 241
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-33 Score=301.31 Aligned_cols=250 Identities=21% Similarity=0.307 Sum_probs=173.5
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHH-HHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLD-LLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~-~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|+. +++.++||||++++|++.+.+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~------ 94 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG------ 94 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS------
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC------
Confidence 367888999999999999999964 78999999997542 333455566665 777889999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEec
Q 004232 559 VNKVFLVYEFMSNGNFRTHISEN--TPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSD 636 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~D 636 (766)
..++||||+++ +|.+++... .....+++..+..++.+++.||.|||+. ++|+||||||+||+++.++.+||+|
T Consensus 95 --~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~D 169 (327)
T 3aln_A 95 --DCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCD 169 (327)
T ss_dssp --EEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECC
T ss_pred --ceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEcc
Confidence 68999999995 777766531 1124588999999999999999999985 2789999999999999999999999
Q ss_pred CCCCccccccccc----c---cCCCCCC----cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCc
Q 004232 637 YGLSIVSEDINSV----G---GKQEDPN----SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGR 705 (766)
Q Consensus 637 FGla~~~~~~~~~----~---~~~~~~~----~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~ 705 (766)
||+++........ + ...++.. ....++.++|||||||++|||+||+.|+...... ......+.. ...
T Consensus 170 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~-~~~ 247 (327)
T 3aln_A 170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-FDQLTQVVK-GDP 247 (327)
T ss_dssp CSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------CCCCC-SCC
T ss_pred CCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-HHHHHHHhc-CCC
Confidence 9999654322111 1 1111111 1223566889999999999999999998642211 111111111 111
Q ss_pred cccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 706 QRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 706 ~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+... .....+ ..+.+++.+||+.||.+||++.||++.
T Consensus 248 ~~~~~~-~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 248 PQLSNS-EEREFS----PSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCC-SSCCCC----HHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCc-ccccCC----HHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 111110 001112 247789999999999999999999864
No 242
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.2e-33 Score=303.26 Aligned_cols=257 Identities=17% Similarity=0.271 Sum_probs=182.1
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh-hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK-KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++||||+++++++...... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE---NF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST---TC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC---cc
Confidence 467889999999999999999965 68999999997543 34456788999999999999999999988754210 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 36899999998 6999988753 388999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc---------------ccCC-CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchH-HHHhhh
Q 004232 640 SIVSEDINSV---------------GGKQ-EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQ-EELDSL 699 (766)
Q Consensus 640 a~~~~~~~~~---------------~~~~-~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~-~~~~~~ 699 (766)
+......... +... ..|. ....++.++|||||||++|||++|+.||........ ..+...
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 9754321110 0000 0111 012345578999999999999999999875432111 111111
Q ss_pred hcccC----cccc--------cccc-ccCCCCH-----HHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 700 NSQEG----RQRL--------VDPV-VMATSSL-----ESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 700 ~~~~~----~~~~--------~d~~-~~~~~~~-----~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..... ...+ .... ....... .....+.+++.+||+.||.+|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 0000 0000 0000000 012346789999999999999999999864
No 243
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.9e-33 Score=300.30 Aligned_cols=253 Identities=17% Similarity=0.256 Sum_probs=180.1
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC--hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS--KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+... ..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~--~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR--NF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG--GC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccc--cc
Confidence 5688889999999999999986 46999999998653 2344677899999999999999999999988754211 11
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...++||||++ |+|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeeccc
Confidence 24699999998 688887742 388999999999999999999997 899999999999999999999999999
Q ss_pred Cccccccccc-ccCC--CCCC---cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc---c-------
Q 004232 640 SIVSEDINSV-GGKQ--EDPN---SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ---E------- 703 (766)
Q Consensus 640 a~~~~~~~~~-~~~~--~~~~---~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~---~------- 703 (766)
+......... .++. ..|. ....++.++|||||||++|||+||+.||...... ..+..+... .
T Consensus 173 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH--HHHHHHHHHHCBCCHHHHTT
T ss_pred ccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHH
Confidence 9754332111 1111 0111 1134567899999999999999999998743321 111111000 0
Q ss_pred -----------CccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 704 -----------GRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 704 -----------~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.......+.... ........+.+++.+|++.||.+|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTT-TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHH-hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000000 000112347789999999999999999999764
No 244
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.2e-33 Score=306.36 Aligned_cols=258 Identities=14% Similarity=0.135 Sum_probs=181.2
Q ss_pred hcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC--------CCCcccccceeecCC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR--------HPHLVCLLGHCIDGG 552 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~--------Hpniv~l~g~~~~~~ 552 (766)
.++|++.+.||+|+||+||+|+. .+++.||||+++... ...+.+.+|+.++++++ ||||+++++++...+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999985 568999999997543 34567889999999986 788999999887431
Q ss_pred CCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCC--
Q 004232 553 GRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHR-- 630 (766)
Q Consensus 553 ~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~-- 630 (766)
. .....++||||+ +|++.+++.+.. ...+++..+..++.||+.||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~----~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 V----NGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp T----TEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred C----CCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 1 013689999999 556666665432 234899999999999999999999853 799999999999999775
Q ss_pred -----------------------------------------------cEEEecCCCCccccccccc--cc---CCCCCCc
Q 004232 631 -----------------------------------------------IAKLSDYGLSIVSEDINSV--GG---KQEDPNS 658 (766)
Q Consensus 631 -----------------------------------------------~~kl~DFGla~~~~~~~~~--~~---~~~~~~~ 658 (766)
.+||+|||++......... ++ ..++...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhc
Confidence 7999999999754332111 11 1111111
Q ss_pred ccCCCCCCCEeehhHHHHHHhcCCCccccCccc----hHHHHhhhh---cc--------c-Cccccccc----------c
Q 004232 659 WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF----LQEELDSLN---SQ--------E-GRQRLVDP----------V 712 (766)
Q Consensus 659 ~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~----~~~~~~~~~---~~--------~-~~~~~~d~----------~ 712 (766)
...++.++|||||||++|||+||+.||...... .......+. .. . ....+... .
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 234567899999999999999999998643210 111111110 00 0 00000000 0
Q ss_pred c---------cCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 713 V---------MATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 713 ~---------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
. ......+....+.+|+.+||+.||.+|||+.||++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 00123445566889999999999999999999975
No 245
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.6e-33 Score=312.55 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=169.8
Q ss_pred CCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcceEE
Q 004232 485 FDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
|...++||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +|||||++++++.+.+ ..+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--------~~~ 85 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDR--------FLY 85 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSS--------EEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCC--------eEE
Confidence 4446789999999998776678999999998643 235678899999886 8999999999887653 789
Q ss_pred EEEEccCCCChhhhhhcCCCCC-C---CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC----------
Q 004232 564 LVYEFMSNGNFRTHISENTPGK-V---LNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH---------- 629 (766)
Q Consensus 564 lv~Ey~~~GsL~~~l~~~~~~~-~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~---------- 629 (766)
+||||+. |+|.+++....... . ..+..+..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccC
Confidence 9999996 69999997643211 1 12334578999999999999997 89999999999999754
Q ss_pred ---CcEEEecCCCCccccccccc--------ccCC--CCCCc---------ccCCCCCCCEeehhHHHHHHhc-CCCccc
Q 004232 630 ---RIAKLSDYGLSIVSEDINSV--------GGKQ--EDPNS---------WEMTKLEDDVFSFGFMLLESVA-GPSVAA 686 (766)
Q Consensus 630 ---~~~kl~DFGla~~~~~~~~~--------~~~~--~~~~~---------~~~~~~~~DV~SfGvil~Ellt-G~~p~~ 686 (766)
+.+||+|||+++........ .++. ..|.. ...++.++|||||||++|||+| |+.|+.
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~ 241 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241 (434)
T ss_dssp CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCC
Confidence 48999999999765432110 0111 01110 1345667899999999999999 899986
Q ss_pred cCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 687 RKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
.............. .... ............+.+++.+||+.||.+|||+.||++
T Consensus 242 ~~~~~~~~i~~~~~------~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 242 DKYSRESNIIRGIF------SLDE--MKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp STTTHHHHHHHTCC------CCCC--CTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CchhhHHHHhcCCC------Cccc--ccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 43222111111110 1000 111112233456889999999999999999999985
No 246
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=8.9e-33 Score=303.26 Aligned_cols=196 Identities=20% Similarity=0.278 Sum_probs=153.6
Q ss_pred HhcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CC-----CcccccceeecCCC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HP-----HLVCLLGHCIDGGG 553 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hp-----niv~l~g~~~~~~~ 553 (766)
..++|++.+.||+|+||+||+|+.. +++.||||+++... ...+++.+|+.+++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~- 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN- 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-
Confidence 4578999999999999999999854 68899999997543 34567788898888885 55 3899999888753
Q ss_pred CCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc--CCCc
Q 004232 554 RDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN--EHRI 631 (766)
Q Consensus 554 ~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--~~~~ 631 (766)
..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||++. .+|+||||||+|||++ .++.
T Consensus 130 -------~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 130 -------HLCLVFEMLS-YNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp -------EEEEEEECCC-CBHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCC
T ss_pred -------ceEEEEecCC-CCHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCc
Confidence 7899999997 599999876532 34899999999999999999999632 3899999999999994 5788
Q ss_pred EEEecCCCCccccccccc--cc---CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccC
Q 004232 632 AKLSDYGLSIVSEDINSV--GG---KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARK 688 (766)
Q Consensus 632 ~kl~DFGla~~~~~~~~~--~~---~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~ 688 (766)
+||+|||+++........ ++ ..++......++.++|||||||++|||+||+.||...
T Consensus 200 ~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999765332111 11 1111111234567899999999999999999999753
No 247
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.7e-33 Score=300.73 Aligned_cols=249 Identities=18% Similarity=0.239 Sum_probs=167.6
Q ss_pred hcCCCcC-CceecCCceeEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 482 TNNFDMS-AIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~-~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.++|.+. ++||+|+||.||+|+.. +|+.||||++...... .+ +....++.++||||+++++++...... .
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~----~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA-RQ---EVDHHWQASGGPHIVCILDVYENMHHG----K 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH-HH---HHHHHHHHTTSTTBCCEEEEEEEEETT----E
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH-HH---HHHHHHHhcCCCChHHHHHHHhhccCC----C
Confidence 4678874 46999999999999865 6999999998654321 12 222345677999999999998753210 1
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC---CCcEEEec
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE---HRIAKLSD 636 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~---~~~~kl~D 636 (766)
...++||||+++|+|.+++.+.. ...+++..+..++.+++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEec
Confidence 35899999999999999998653 24589999999999999999999997 8999999999999986 45699999
Q ss_pred CCCCcccccccccc--c----CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHH-H-HhhhhcccCcccc
Q 004232 637 YGLSIVSEDINSVG--G----KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQE-E-LDSLNSQEGRQRL 708 (766)
Q Consensus 637 FGla~~~~~~~~~~--~----~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~-~-~~~~~~~~~~~~~ 708 (766)
||++.......... + ..++......++.++|||||||++|||++|+.||......... . ...+.. .....
T Consensus 175 fg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~ 252 (336)
T 3fhr_A 175 FGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRL--GQYGF 252 (336)
T ss_dssp CTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CC
T ss_pred cccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhc--ccccc
Confidence 99996543221110 0 0111111112234689999999999999999998643221110 0 000000 00111
Q ss_pred ccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 709 VDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 709 ~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
..+.. ...+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 253 ~~~~~-~~~~----~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 253 PNPEW-SEVS----EDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp CTTTS-TTCC----HHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred Cchhh-ccCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11110 1112 336789999999999999999999874
No 248
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=297.82 Aligned_cols=238 Identities=24% Similarity=0.382 Sum_probs=173.0
Q ss_pred HHHhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh------hhHHHHHHHHHHHHhC----CCCCcccccce
Q 004232 479 KEATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKL----RHPHLVCLLGH 547 (766)
Q Consensus 479 ~~~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l----~Hpniv~l~g~ 547 (766)
....++|++.+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 33457899999999999999999985 4688999999965432 1233466789999988 89999999999
Q ss_pred eecCCCCCCcCcceEEEEEEc-cCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE
Q 004232 548 CIDGGGRDDYAVNKVFLVYEF-MSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL 626 (766)
Q Consensus 548 ~~~~~~~~~~~~~~~~lv~Ey-~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl 626 (766)
+.+.+ ..++|+|| +++|+|.+++.+.. .+++..+..++.+++.||+|||+. +|+||||||+||++
T Consensus 107 ~~~~~--------~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 172 (312)
T 2iwi_A 107 FETQE--------GFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILI 172 (312)
T ss_dssp C-------------CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEE
T ss_pred EecCC--------eEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEE
Confidence 87653 57999999 89999999997653 389999999999999999999997 89999999999999
Q ss_pred c-CCCcEEEecCCCCcccccccccccCC--C--CCCc--ccC-CCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhh
Q 004232 627 N-EHRIAKLSDYGLSIVSEDINSVGGKQ--E--DPNS--WEM-TKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDS 698 (766)
Q Consensus 627 d-~~~~~kl~DFGla~~~~~~~~~~~~~--~--~~~~--~~~-~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~ 698 (766)
+ .++.+||+|||++............+ . .|.. ... .+.++|||||||++|||++|+.||.... ....
T Consensus 173 ~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~- 247 (312)
T 2iwi_A 173 DLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----EILE- 247 (312)
T ss_dssp ETTTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH-
T ss_pred eCCCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----HHhh-
Confidence 9 88999999999987654322111110 0 0100 011 2236899999999999999999986321 1110
Q ss_pred hhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 699 LNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 699 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
....+ ....+ ..+.+++.+||+.||.+||++.||++.
T Consensus 248 -----~~~~~-----~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 -----AELHF-----PAHVS----PDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -----TCCCC-----CTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----hccCC-----cccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 01111 236789999999999999999999863
No 249
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.98 E-value=2.3e-32 Score=291.74 Aligned_cols=246 Identities=23% Similarity=0.279 Sum_probs=165.6
Q ss_pred hcCCCcCCceecCCceeEEEEEec-CCceEEEEEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcC
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYA 558 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~ 558 (766)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.++..+++.++||||+++++++.+.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~------ 97 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT------ 97 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC------
Confidence 467888899999999999999975 78999999997543 222344455556788889999999999998753
Q ss_pred cceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 559 VNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
..++||||+ ++.+..+..... ..+++..+..++.+++.||+|||+.+ +|+||||||+||+++.++.+||+|||
T Consensus 98 --~~~lv~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 98 --DVFIAMELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp --EEEEEECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred --cEEEEEecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC--CEEeCCCCHHHEEECCCCCEEEEECC
Confidence 789999999 445554443322 34889999999999999999999831 79999999999999999999999999
Q ss_pred CCccccccccc----ccCC-CCCC-------cccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCcc
Q 004232 639 LSIVSEDINSV----GGKQ-EDPN-------SWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQ 706 (766)
Q Consensus 639 la~~~~~~~~~----~~~~-~~~~-------~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~ 706 (766)
++......... +... ..|. ....++.++|||||||++|||+||+.||...... ...+..+... ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~-~~~ 248 (318)
T 2dyl_A 171 ISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-FEVLTKVLQE-EPP 248 (318)
T ss_dssp TC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-HHHHHHHHHS-CCC
T ss_pred CchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-HHHHHHHhcc-CCC
Confidence 98654322111 1100 0111 1123456789999999999999999998743221 1112222111 111
Q ss_pred ccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 707 RLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 707 ~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
.+... ...+ ..+.+++.+||+.||.+||++.||++.
T Consensus 249 ~~~~~---~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 LLPGH---MGFS----GDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CCCSS---SCCC----HHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CCCcc---CCCC----HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11110 0111 236788999999999999999999864
No 250
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.98 E-value=6.2e-33 Score=318.68 Aligned_cols=267 Identities=15% Similarity=0.143 Sum_probs=186.6
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCcc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++...... ....
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~--~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL--APND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC--CTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccc--cCCC
Confidence 6799999999999999999986 46899999998754 344567899999999999999999999987652110 0113
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCc---EEEecC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRI---AKLSDY 637 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~---~kl~DF 637 (766)
..++||||+++|+|.+++........+++..+..++.+++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 5799999999999999998755444688889999999999999999997 8999999999999996654 999999
Q ss_pred CCCccccccccc-------ccCCCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhccc-------
Q 004232 638 GLSIVSEDINSV-------GGKQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQE------- 703 (766)
Q Consensus 638 Gla~~~~~~~~~-------~~~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~------- 703 (766)
|++......... .+..++......++.++|||||||++|||+||..||...... ..+...+....
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-HHSSTTCC------CCSC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-hhhhhhhhcccchhhhhh
Confidence 999765432211 111122222345567899999999999999999998643211 11111000000
Q ss_pred ----Cccccccc-cccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHH-----HHHHHHHHHh
Q 004232 704 ----GRQRLVDP-VVMATSSLESLSIVISIANKCICSESWSRPSFED-----ILWNLQYAAQ 755 (766)
Q Consensus 704 ----~~~~~~d~-~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~e-----v~~~L~~~~~ 755 (766)
....+... .............+.+++.+|++.||.+|||+.| ..+.++.+..
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00000000 0001111223455789999999999999999988 5566666654
No 251
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.98 E-value=6e-32 Score=305.71 Aligned_cols=268 Identities=21% Similarity=0.156 Sum_probs=162.1
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
+++.|.+.+..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+.
T Consensus 38 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~ 117 (477)
T 2id5_A 38 DLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIV 117 (477)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCC
T ss_pred ECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccc
Confidence 34555544444556777777777777777777766777777777777777777776555555667777777777777777
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC--
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL-- 256 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~-- 256 (766)
+..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+++..+. +..+++|+.|++++|.+++..+..
T Consensus 118 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~ 197 (477)
T 2id5_A 118 ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFK 197 (477)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSC
T ss_pred cCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcc
Confidence 66666777777777777777777766666677777777777777777654443 566666666666666665544322
Q ss_pred -CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEE
Q 004232 257 -PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFF 335 (766)
Q Consensus 257 -~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L 335 (766)
...|+.+++++|.+.+.+|..+....+|+.|++++|++++.++..+..+++|+.|+|++|.+++..+..+..+.+|+.|
T Consensus 198 ~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (477)
T 2id5_A 198 RLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEI 277 (477)
T ss_dssp SCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEE
T ss_pred cCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEE
Confidence 1345555555555554444444444455555555555555544445555555555555555554444445555555555
Q ss_pred eCcCCccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 336 DISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 336 ~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
+|++|++++..|..+..+++|+.|++++|.++
T Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 309 (477)
T 2id5_A 278 QLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309 (477)
T ss_dssp ECCSSCCSEECTTTBTTCTTCCEEECCSSCCS
T ss_pred ECCCCccceECHHHhcCcccCCEEECCCCcCc
Confidence 55555555555555555555555555555544
No 252
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.98 E-value=9.8e-33 Score=307.15 Aligned_cols=240 Identities=18% Similarity=0.210 Sum_probs=168.7
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCcCcc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDYAVN 560 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~~~~ 560 (766)
..+|+..++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.+..
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-------- 91 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ-------- 91 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT--------
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC--------
Confidence 345888899999999996655556789999999865432 2356799999999 7999999999988753
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcC-----CCcEEEe
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNE-----HRIAKLS 635 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~-----~~~~kl~ 635 (766)
..++||||++ |+|.+++..... ...+.....++.||+.||+|||+. +|+||||||+|||++. ...+||+
T Consensus 92 ~~~lv~E~~~-g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~ 165 (432)
T 3p23_A 92 FQYIAIELCA-ATLQEYVEQKDF--AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMIS 165 (432)
T ss_dssp EEEEEEECCS-EEHHHHHHSSSC--CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEEC
T ss_pred EEEEEEECCC-CCHHHHHHhcCC--CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEe
Confidence 7899999997 599999876532 234445678999999999999997 8999999999999943 3468899
Q ss_pred cCCCCcccccccc--------cccCC-CCCCc-----ccCCCCCCCEeehhHHHHHHhc-CCCccccCccchHHHHhhhh
Q 004232 636 DYGLSIVSEDINS--------VGGKQ-EDPNS-----WEMTKLEDDVFSFGFMLLESVA-GPSVAARKGQFLQEELDSLN 700 (766)
Q Consensus 636 DFGla~~~~~~~~--------~~~~~-~~~~~-----~~~~~~~~DV~SfGvil~Ellt-G~~p~~~~~~~~~~~~~~~~ 700 (766)
|||+++....... .++.. ..|.. ...++.++|||||||++|||+| |+.|+.......... ..
T Consensus 166 DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~---~~ 242 (432)
T 3p23_A 166 DFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---LL 242 (432)
T ss_dssp CTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH---HT
T ss_pred cccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH---Hh
Confidence 9999865432110 01100 01111 1234457899999999999999 888885432211111 11
Q ss_pred cccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 701 SQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 701 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
... ......+ ....-..+.+++.+||+.||.+|||+.||++
T Consensus 243 ~~~-~~~~~~~------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 243 GAC-SLDCLHP------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TCC-CCTTSCT------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccC-CccccCc------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 110 0111111 1122234678999999999999999999983
No 253
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.98 E-value=2.3e-32 Score=296.33 Aligned_cols=252 Identities=15% Similarity=0.219 Sum_probs=179.0
Q ss_pred cCCCcCCceecCCceeEEEEEec-CC-ceEEEEEccCChhhhHHHHHHHHHHHHhCCCCC------cccccceeecCCCC
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE-NG-TSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH------LVCLLGHCIDGGGR 554 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpn------iv~l~g~~~~~~~~ 554 (766)
++|++.+.||+|+||+||+|+.. ++ +.||||+++... ...+.+.+|+.++++++|++ ++.+++++...+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-- 95 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG-- 95 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT--
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC--
Confidence 67889999999999999999864 34 789999997543 34567888999999998776 888888887653
Q ss_pred CCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEE--------
Q 004232 555 DDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILL-------- 626 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILl-------- 626 (766)
..++||||+ +|++.+++.+.. ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 96 ------~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 96 ------HMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp ------EEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEE
T ss_pred ------eEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccc
Confidence 789999999 667777776543 23589999999999999999999997 89999999999999
Q ss_pred -----------cCCCcEEEecCCCCccccccccc-ccC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCcc
Q 004232 627 -----------NEHRIAKLSDYGLSIVSEDINSV-GGK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQ 690 (766)
Q Consensus 627 -----------d~~~~~kl~DFGla~~~~~~~~~-~~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~ 690 (766)
+.++.+||+|||+++........ .++ .++......++.++|||||||++|||+||+.||.....
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 66789999999999754332111 111 11111123456789999999999999999999975432
Q ss_pred ch-HHHHhhhhcc--------cCccccc-cccc---------------------cCCCCHHHHHHHHHHHHHhccCCCCC
Q 004232 691 FL-QEELDSLNSQ--------EGRQRLV-DPVV---------------------MATSSLESLSIVISIANKCICSESWS 739 (766)
Q Consensus 691 ~~-~~~~~~~~~~--------~~~~~~~-d~~~---------------------~~~~~~~~~~~~~~l~~~C~~~~p~~ 739 (766)
.. ...+...... ....... .... ...........+.+|+.+||+.||.+
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 11 1111111000 0000000 0000 00011122346889999999999999
Q ss_pred CCCHHHHHH
Q 004232 740 RPSFEDILW 748 (766)
Q Consensus 740 RPs~~ev~~ 748 (766)
|||+.||++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999975
No 254
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=5.2e-33 Score=297.45 Aligned_cols=236 Identities=20% Similarity=0.318 Sum_probs=178.7
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh------hhHHHHHHHHHHHHhCC--CCCcccccceeecC
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK------YTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDG 551 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~e~~~l~~l~--Hpniv~l~g~~~~~ 551 (766)
..++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++ ||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 456799999999999999999985 5789999999865421 12345678999999996 59999999999875
Q ss_pred CCCCCcCcceEEEEEEccCC-CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc-CC
Q 004232 552 GGRDDYAVNKVFLVYEFMSN-GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN-EH 629 (766)
Q Consensus 552 ~~~~~~~~~~~~lv~Ey~~~-GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld-~~ 629 (766)
+ ..++|+||+.+ ++|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++ ++
T Consensus 121 ~--------~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 121 D--------SFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNR 186 (320)
T ss_dssp S--------EEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTT
T ss_pred C--------cEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCC
Confidence 3 68999999986 89999997643 488999999999999999999997 899999999999999 78
Q ss_pred CcEEEecCCCCccccccccccc--CC--CCCC--ccc-CCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcc
Q 004232 630 RIAKLSDYGLSIVSEDINSVGG--KQ--EDPN--SWE-MTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQ 702 (766)
Q Consensus 630 ~~~kl~DFGla~~~~~~~~~~~--~~--~~~~--~~~-~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~ 702 (766)
+.+||+|||++........... +. ..|. ... ..+.++|||||||++|||+||+.||.... .... .
T Consensus 187 ~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~----~~~~---~- 258 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EIIR---G- 258 (320)
T ss_dssp TEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HHHH---C-
T ss_pred CCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh----hhhc---c-
Confidence 9999999999876543221111 00 0111 011 12346799999999999999999986321 1110 0
Q ss_pred cCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 004232 703 EGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILWN 749 (766)
Q Consensus 703 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~~ 749 (766)
... .. ...+ ..+.+++.+||+.||.+||++.||++.
T Consensus 259 --~~~-~~----~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 --QVF-FR----QRVS----SECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --CCC-CS----SCCC----HHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --ccc-cc----ccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 11 1111 236789999999999999999999763
No 255
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.97 E-value=2.5e-32 Score=298.49 Aligned_cols=258 Identities=13% Similarity=0.176 Sum_probs=181.4
Q ss_pred cCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-----------CCCcccccceeec
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-----------HPHLVCLLGHCID 550 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-----------Hpniv~l~g~~~~ 550 (766)
++|.+.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5688899999999999999985 578999999997543 34567888999998886 8999999999886
Q ss_pred CCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEc---
Q 004232 551 GGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLN--- 627 (766)
Q Consensus 551 ~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld--- 627 (766)
.+. .....++||||+ +|+|.+++.+... ..+++..+..++.||+.||+|||+.+ +|+||||||+|||++
T Consensus 98 ~~~----~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~ 169 (373)
T 1q8y_A 98 KGP----NGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVD 169 (373)
T ss_dssp EET----TEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEE
T ss_pred cCC----CCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccC
Confidence 421 112689999999 8999999876432 34889999999999999999999852 799999999999994
Q ss_pred ---CCCcEEEecCCCCcccccccccc-cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCccccCccc----hHHH
Q 004232 628 ---EHRIAKLSDYGLSIVSEDINSVG-GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSVAARKGQF----LQEE 695 (766)
Q Consensus 628 ---~~~~~kl~DFGla~~~~~~~~~~-~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~----~~~~ 695 (766)
..+.+||+|||++.......... ++ .++......++.++|||||||++|||+||+.||...... ....
T Consensus 170 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 170 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp TTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred CCcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 34589999999997654321111 11 111111234567899999999999999999998743211 0111
Q ss_pred Hhhhhc-ccC---------------------ccccccccc---------cCCCCHHHHHHHHHHHHHhccCCCCCCCCHH
Q 004232 696 LDSLNS-QEG---------------------RQRLVDPVV---------MATSSLESLSIVISIANKCICSESWSRPSFE 744 (766)
Q Consensus 696 ~~~~~~-~~~---------------------~~~~~d~~~---------~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ 744 (766)
...+.. .+. ...+..... ...........+.+|+.+||+.||.+|||++
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 329 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHH
Confidence 111100 000 000000000 0012234456688999999999999999999
Q ss_pred HHHHH
Q 004232 745 DILWN 749 (766)
Q Consensus 745 ev~~~ 749 (766)
||++.
T Consensus 330 ell~h 334 (373)
T 1q8y_A 330 GLVNH 334 (373)
T ss_dssp HHHTC
T ss_pred HHhhC
Confidence 99763
No 256
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=5e-31 Score=296.20 Aligned_cols=253 Identities=19% Similarity=0.200 Sum_probs=228.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCC-CccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEE
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSV-PPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (766)
++|++|+|++|.+.+..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 67999999999999999999999999999999999998665 56799999999999999999999999999999999999
Q ss_pred ccCccCCCCCCcc--ccCCCCCCEEEccCCccCCCCCC--CCCCCCCCEEECCCCCCCCCCCCCC---------------
Q 004232 197 MRNNKLAGPFPSS--IQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKLP--------------- 257 (766)
Q Consensus 197 L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~ls~N~l~~~~p~~~--------------- 257 (766)
|++|++++.+|.. +..+++|++|+|++|.+++..|. +..+++|++|++++|.+++..|...
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866665 99999999999999999998776 7899999999999999988766421
Q ss_pred ----------------------CCCcEEEccCCcCccCCcccccC-----------------------------------
Q 004232 258 ----------------------RGLVMAFLSNNSFSGEIPKQYGQ----------------------------------- 280 (766)
Q Consensus 258 ----------------------~~l~~l~ls~N~l~~~~p~~~~~----------------------------------- 280 (766)
..|+.+++++|++++..|..+..
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 35788899999888766655432
Q ss_pred ----CCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCC
Q 004232 281 ----LNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDK 356 (766)
Q Consensus 281 ----l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l 356 (766)
.++|+.|++++|++++.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..|..+..+++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 2589999999999999999999999999999999999999989999999999999999999998889999999999
Q ss_pred ceeecCCCcCCCCc
Q 004232 357 RVVKFRGNCLSSNV 370 (766)
Q Consensus 357 ~~l~l~~N~l~~~~ 370 (766)
+.|++++|.+++..
T Consensus 350 ~~L~Ls~N~l~~~~ 363 (455)
T 3v47_A 350 EVLDLSYNHIRALG 363 (455)
T ss_dssp CEEECCSSCCCEEC
T ss_pred CEEECCCCcccccC
Confidence 99999999987643
No 257
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=5e-32 Score=319.27 Aligned_cols=240 Identities=18% Similarity=0.264 Sum_probs=177.5
Q ss_pred cCCCcCCceecCCceeEEEEEec--CCceEEEEEccCC-hhhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 483 NNFDMSAIMGEGSYGKLYKGRLE--NGTSVAIRCLPSS-KKYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 483 ~~f~~~~~lG~G~fg~Vy~~~~~--~g~~vAvK~l~~~-~~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
++|++.+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.++++++|||||+++++|.+.+... .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~---~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG---D 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS---C
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC---C
Confidence 67999999999999999999964 6899999998643 3445667899999999999999999999998764211 1
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
...|+||||+++|+|.+++.. .++|..+..++.||+.||+|||+. +|+||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 126999999999999987753 489999999999999999999997 89999999999999986 899999999
Q ss_pred CcccccccccccCCC--CCCc-ccCCCCCCCEeehhHHHHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCC
Q 004232 640 SIVSEDINSVGGKQE--DPNS-WEMTKLEDDVFSFGFMLLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMAT 716 (766)
Q Consensus 640 a~~~~~~~~~~~~~~--~~~~-~~~~~~~~DV~SfGvil~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 716 (766)
++.........++.. .|.. ...++.++|||||||++|||++|..|+..... ..+... .
T Consensus 228 a~~~~~~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~---------------~~~~~~----~ 288 (681)
T 2pzi_A 228 VSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYV---------------DGLPED----D 288 (681)
T ss_dssp CEETTCCSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEEC---------------SSCCTT----C
T ss_pred chhcccCCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccc---------------cccccc----c
Confidence 976544322211111 1110 11235678999999999999999887652110 000000 0
Q ss_pred CCHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHH
Q 004232 717 SSLESLSIVISIANKCICSESWSRPS-FEDILWNLQYA 753 (766)
Q Consensus 717 ~~~~~~~~~~~l~~~C~~~~p~~RPs-~~ev~~~L~~~ 753 (766)
........+.+++.+||+.||.+||+ ++++...|+..
T Consensus 289 ~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 289 PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 00111234778999999999999995 55566666654
No 258
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=3.5e-31 Score=307.65 Aligned_cols=256 Identities=20% Similarity=0.199 Sum_probs=215.7
Q ss_pred Ccccc-cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCccc
Q 004232 108 DSFVT-TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWF 186 (766)
Q Consensus 108 ~~~~~-~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 186 (766)
+.+|. .+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|
T Consensus 64 ~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~ 143 (597)
T 3oja_B 64 RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIF 143 (597)
T ss_dssp SEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHh
Confidence 44554 47889999999999999999888899999999999999999998888889999999999999999997777778
Q ss_pred CCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCC-------------------CCCEEECCCC
Q 004232 187 DSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLG-------------------SLNVLNLSDN 247 (766)
Q Consensus 187 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~-------------------~L~~L~ls~N 247 (766)
+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..++ +|+.|++++|
T Consensus 144 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n 221 (597)
T 3oja_B 144 HNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHN 221 (597)
T ss_dssp TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSS
T ss_pred ccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCC
Confidence 99999999999999999988889999999999999999998753 23333 4555555555
Q ss_pred CCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCC
Q 004232 248 KLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLN 327 (766)
Q Consensus 248 ~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 327 (766)
.++...+..+..|+.|+|++|.+++ +..++.+++|+.|+|++|.+++.+|..|..+++|+.|+|++|.+++ +|..+.
T Consensus 222 ~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 298 (597)
T 3oja_B 222 SINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ 298 (597)
T ss_dssp CCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSS
T ss_pred cccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccc
Confidence 5554444555678889999999886 4678889999999999999999988889999999999999999986 577777
Q ss_pred CCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCC
Q 004232 328 CGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 328 ~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (766)
.+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++.
T Consensus 299 ~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 299 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred cCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 7889999999999998 5777778888899999999988753
No 259
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=7e-32 Score=287.63 Aligned_cols=232 Identities=27% Similarity=0.449 Sum_probs=211.1
Q ss_pred CCCCEEecccccccc--cCCccccCCCCCCEEeccc-ccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 118 TSLRVLSLVSLGIWG--SLPDKIHRLYSLEYLDLSS-NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~--~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
.+++.|+|++|.+.+ .+|..|.++++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCC-CCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCcc
Q 004232 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLG-SLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 195 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~-~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~ 272 (766)
|+|++|++++.+|..+..+++|++|+|++|.+++.+|. +..++ +|++|++++| ++++
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N---------------------~l~~ 188 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN---------------------RLTG 188 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSS---------------------EEEE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCC---------------------eeec
Confidence 99999999999999999999999999999999977764 66666 7777766655 4555
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCC
Q 004232 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN 352 (766)
Q Consensus 273 ~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~ 352 (766)
.+|..++.++ |+.|++++|++++.+|..+..+++|+.|+|++|++++.+|. +..+++|+.|++++|++++.+|..+..
T Consensus 189 ~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 266 (313)
T 1ogq_A 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQ 266 (313)
T ss_dssp ECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhc
Confidence 7788888887 99999999999999999999999999999999999988776 788899999999999999999999999
Q ss_pred CCCCceeecCCCcCCCCcCC
Q 004232 353 ESDKRVVKFRGNCLSSNVQN 372 (766)
Q Consensus 353 ~~~l~~l~l~~N~l~~~~~~ 372 (766)
+++|+.|++++|.+++.+|.
T Consensus 267 l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp CTTCCEEECCSSEEEEECCC
T ss_pred CcCCCEEECcCCcccccCCC
Confidence 99999999999999876553
No 260
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.97 E-value=2.3e-30 Score=284.93 Aligned_cols=256 Identities=20% Similarity=0.210 Sum_probs=209.1
Q ss_pred CCccccc-ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcc
Q 004232 107 IDSFVTT-LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNW 185 (766)
Q Consensus 107 ~~~~~~~-l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 185 (766)
+..+|.. +.++++|++|+|++|.+.+..|..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|.++...+..
T Consensus 57 l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~ 136 (390)
T 3o6n_A 57 MRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGI 136 (390)
T ss_dssp ESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred hhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHH
Confidence 4455654 688999999999999998888889999999999999999999888888999999999999999999665566
Q ss_pred cCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCC-------------------CCEEECCC
Q 004232 186 FDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGS-------------------LNVLNLSD 246 (766)
Q Consensus 186 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~-------------------L~~L~ls~ 246 (766)
|+++++|++|++++|++++..|..+..+++|++|+|++|.+++.. +..+++ |+.|++++
T Consensus 137 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~ 214 (390)
T 3o6n_A 137 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASH 214 (390)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCS
T ss_pred hcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCC
Confidence 799999999999999999888888999999999999999998642 333444 55555555
Q ss_pred CCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccC
Q 004232 247 NKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNL 326 (766)
Q Consensus 247 N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~ 326 (766)
|.++.........|+.+++++|++++. ..++.+++|+.|++++|.+++.+|..+..+++|+.|+|++|++++ +|..+
T Consensus 215 n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~ 291 (390)
T 3o6n_A 215 NSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYG 291 (390)
T ss_dssp SCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSS
T ss_pred CeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCccc
Confidence 555544344456788888888888763 568888889999999999888888888888899999999998885 56666
Q ss_pred CCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 327 NCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 327 ~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
..+++|+.|++++|+++ .+|..+..+++|+.|++++|.++.
T Consensus 292 ~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 292 QPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp SCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCC
T ss_pred CCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccce
Confidence 77888899999999888 566667777888889998888874
No 261
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=5.4e-30 Score=298.62 Aligned_cols=259 Identities=22% Similarity=0.234 Sum_probs=162.9
Q ss_pred cccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCcc-CCCCCCCCEEEccCCcCCCCC--Ccc
Q 004232 109 SFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPK-ISTMVKLQTLILDDNFFNNTI--PNW 185 (766)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~--p~~ 185 (766)
.+|..+.++++|++|+|++|.+.+..|..+.++++|++|+|++|.+.+.+|.. +..+++|++|++++|.+++.. |..
T Consensus 292 ~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 371 (606)
T 3t6q_A 292 ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQ 371 (606)
T ss_dssp CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTT
T ss_pred CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchh
Confidence 55666666666666666666666666666666666666666666666555443 666666666666666666544 555
Q ss_pred cCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC--CCCCCCCCEEECCCCCCCCCCCCC---CCCC
Q 004232 186 FDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKL---PRGL 260 (766)
Q Consensus 186 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~ls~N~l~~~~p~~---~~~l 260 (766)
++++++|++|++++|++++..|..+..+++|+.|++++|.+++..+. +..+++|++|++++|.+++..|.. ...|
T Consensus 372 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 451 (606)
T 3t6q_A 372 LRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL 451 (606)
T ss_dssp TTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC
T ss_pred cccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC
Confidence 66666666666666666666666666666666666666666655442 556666666666666666555543 2456
Q ss_pred cEEEccCCcCccC---CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeC
Q 004232 261 VMAFLSNNSFSGE---IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDI 337 (766)
Q Consensus 261 ~~l~ls~N~l~~~---~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~l 337 (766)
+.+++++|++++. .+..++.+++|+.|++++|++++.+|..|..+++|+.|+|++|++++..|..+..++.| .|++
T Consensus 452 ~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L 530 (606)
T 3t6q_A 452 QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNL 530 (606)
T ss_dssp CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEEC
T ss_pred CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEEC
Confidence 6666666666652 22456666666666666666666666666666666666666666666666666666666 6666
Q ss_pred cCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 338 SNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 338 s~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
++|++++.+|..+..+++++.+++++|++.+
T Consensus 531 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 531 ASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp CSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred cCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 6666666666555566666666666666553
No 262
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=1.1e-30 Score=305.41 Aligned_cols=254 Identities=20% Similarity=0.262 Sum_probs=152.1
Q ss_pred cccccc--CCCCCCEEecccccccccCCccccCCCCCCEEeccccc-Ccc-CCCccCCCC------CCCCEEEccCCcCC
Q 004232 110 FVTTLA--RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFG-SVPPKISTM------VKLQTLILDDNFFN 179 (766)
Q Consensus 110 ~~~~l~--~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~ 179 (766)
+|..++ ++++|++|+|++|.+.|.+|+.|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 566666 66666666666666666666666666666666666666 666 566666554 66666666666666
Q ss_pred CCCCc--ccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCC-CCEEECCCCCCCCCCCCC
Q 004232 180 NTIPN--WFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGS-LNVLNLSDNKLDSNLPKL 256 (766)
Q Consensus 180 ~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~-L~~L~ls~N~l~~~~p~~ 256 (766)
.+|. .++++++|++|+|++|+++|.+| .+..+++|++|+|++|+++..++.+..+++ |++|++++|.++ .+|..
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 5666 66666666666666666666666 666666666666666666633334556666 666666666665 34432
Q ss_pred C-----CCCcEEEccCCcCccCCccccc-------CCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCc
Q 004232 257 P-----RGLVMAFLSNNSFSGEIPKQYG-------QLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPK 324 (766)
Q Consensus 257 ~-----~~l~~l~ls~N~l~~~~p~~~~-------~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~ 324 (766)
. .+|+.+++++|++++.+|..|. .+++|+.|++++|+++.+++..+..+++|+.|+|++|+++ .+|.
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~ 474 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPK 474 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCH
Confidence 1 1455666666666666665555 5556666666666666555444445556666666666665 4444
Q ss_pred cCCCC--------CCccEEeCcCCccccCCCCCCC--CCCCCceeecCCCcCCC
Q 004232 325 NLNCG--------GKLVFFDISNNKLTGGLPSCLS--NESDKRVVKFRGNCLSS 368 (766)
Q Consensus 325 ~~~~~--------~~L~~L~ls~N~l~g~~p~~~~--~~~~l~~l~l~~N~l~~ 368 (766)
..... ++|+.|+|++|+++ .+|..+. .+++|+.|++++|.+++
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred HHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 32221 15555666666655 4555544 55555666666655554
No 263
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=1.2e-29 Score=296.85 Aligned_cols=128 Identities=23% Similarity=0.177 Sum_probs=82.1
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
+|+.|.+.+..+.+|.+|++|++|+|++|.|.+..|++|.+|++|++|+|++|+|++..+..|.+|++|++|+|++|+++
T Consensus 58 dLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~ 137 (635)
T 4g8a_A 58 DLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA 137 (635)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC
T ss_pred EeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC
Confidence 34555444333456666777777777777666666666667777777777777666555556666777777777777666
Q ss_pred CCCCcccCCCCCCCEEEccCccCCC-CCCccccCCCCCCEEEccCCccC
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAG-PFPSSIQRISTLSDLDLSKNAIS 227 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~ 227 (766)
+..+..|+++++|++|+|++|++++ .+|..++.+++|++|+|++|+++
T Consensus 138 ~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 138 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 6555666666777777777766654 34566666666666666666543
No 264
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=8e-30 Score=297.17 Aligned_cols=154 Identities=19% Similarity=0.206 Sum_probs=101.5
Q ss_pred CCCCCCCCCCccceEecC-----------CCEEEEEeCCCCCCCCC--CCCcccc-ccccCCCcccCCcccccccCCCCC
Q 004232 55 ADFCYISSSTQVNITCQD-----------NFITELKIIGDKPSNVG--NFDGFAS-ANASLSENFSIDSFVTTLARLTSL 120 (766)
Q Consensus 55 ~~~C~~~~~~~~gv~C~~-----------~~v~~l~l~~~~~~~~~--~~~~~~~-~~~~l~~n~~~~~~~~~l~~l~~L 120 (766)
.+||.+.. ....|.|.. ..++.++++++.+.+.. .|.++.. ...+++.|...+..|..|.++++|
T Consensus 4 ~~~c~~~~-~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVV-PNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEE-TTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecC-CCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 35676521 224588853 24667777666544321 1222111 122455565555556677788888
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC-CCCcccCCCCCCCEEEccC
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN-TIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~ 199 (766)
++|+|++|.+.+..|+.|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 888888888877777778888888888888888876666778888888888888888775 5677788888888888888
Q ss_pred ccCCCCCCcc
Q 004232 200 NKLAGPFPSS 209 (766)
Q Consensus 200 N~l~~~~p~~ 209 (766)
|++++..|..
T Consensus 163 n~l~~~~~~~ 172 (606)
T 3vq2_A 163 NYIQTITVND 172 (606)
T ss_dssp SCCCEECTTT
T ss_pred CcceecChhh
Confidence 8777655543
No 265
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1.1e-29 Score=306.70 Aligned_cols=301 Identities=19% Similarity=0.211 Sum_probs=242.6
Q ss_pred eEecCCCEEEEEeCCCCCCCCC--CCCcccc-ccccCCCcccCCcc-cccccCCCCCCEEecccccccccCCccccCCCC
Q 004232 68 ITCQDNFITELKIIGDKPSNVG--NFDGFAS-ANASLSENFSIDSF-VTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYS 143 (766)
Q Consensus 68 v~C~~~~v~~l~l~~~~~~~~~--~~~~~~~-~~~~l~~n~~~~~~-~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~ 143 (766)
|.+....++.|+++++.+.+.. .|.++.. ...+++.|...+.+ |..|.+|++|++|+|++|.+.+..|+.|+++++
T Consensus 19 vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 98 (844)
T 3j0a_A 19 VPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFH 98 (844)
T ss_dssp CCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSS
T ss_pred CCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcc
Confidence 3333346778888776554321 2222111 12245556555566 667888888888888888888888888888888
Q ss_pred CCEEecccccCccCCCcc--CCCCCCCCEEEccCCcCCCCCC-cccCCCCCCCEEEccCccCCCCCCccccCC--CCCCE
Q 004232 144 LEYLDLSSNFLFGSVPPK--ISTMVKLQTLILDDNFFNNTIP-NWFDSLPSLTFLSMRNNKLAGPFPSSIQRI--STLSD 218 (766)
Q Consensus 144 L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~ 218 (766)
|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~ 178 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCC
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccce
Confidence 888888888888766665 8888888888888888887655 578888888888888888888888888777 78888
Q ss_pred EEccCCccCCCCCC-CCCCCC------CCEEECCCCCCCCCCCCC-----------------------------------
Q 004232 219 LDLSKNAISGSLPD-LSSLGS------LNVLNLSDNKLDSNLPKL----------------------------------- 256 (766)
Q Consensus 219 L~Ls~N~l~~~~p~-~~~l~~------L~~L~ls~N~l~~~~p~~----------------------------------- 256 (766)
|+|+.|.+++..|. +..+.+ |++|++++|.+++.++..
T Consensus 179 L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~ 258 (844)
T 3j0a_A 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258 (844)
T ss_dssp CEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGT
T ss_pred EECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChh
Confidence 88888888876653 444443 999999999877654321
Q ss_pred ------CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCC
Q 004232 257 ------PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGG 330 (766)
Q Consensus 257 ------~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~ 330 (766)
..+++.+++++|.+++..|..|+.+++|+.|+|++|++++.+|..|..+++|+.|+|++|++++..|..+..++
T Consensus 259 ~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 338 (844)
T 3j0a_A 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP 338 (844)
T ss_dssp TTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT
T ss_pred hhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC
Confidence 14688999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred CccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 331 KLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 331 ~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+|+.|++++|++++..+..+..+++|+.|++++|.+++
T Consensus 339 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 339 KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 99999999999998888889999999999999998875
No 266
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.97 E-value=7.1e-30 Score=297.59 Aligned_cols=268 Identities=21% Similarity=0.185 Sum_probs=221.1
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
+++.|.+.+..|..|+++++|++|+|++|.+.+..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.++
T Consensus 39 ~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~ 118 (606)
T 3t6q_A 39 EFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGIS 118 (606)
T ss_dssp ECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCS
T ss_pred EccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcc
Confidence 46666666666778999999999999999999888999999999999999999998888889999999999999999999
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCC--EEECCCCCCCCCCCCC
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLN--VLNLSDNKLDSNLPKL 256 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~--~L~ls~N~l~~~~p~~ 256 (766)
+..|..|+++++|++|+|++|++++..++.+..+++|++|+|++|.+++..|. +..+++|+ .|++++|.+++..|..
T Consensus 119 ~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~ 198 (606)
T 3t6q_A 119 SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGA 198 (606)
T ss_dssp CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTT
T ss_pred cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhH
Confidence 87788899999999999999999875544555589999999999999876654 67788888 8899999888766543
Q ss_pred CC------------------------------------------------------CCcEEEccCCcCccCCcccccCCC
Q 004232 257 PR------------------------------------------------------GLVMAFLSNNSFSGEIPKQYGQLN 282 (766)
Q Consensus 257 ~~------------------------------------------------------~l~~l~ls~N~l~~~~p~~~~~l~ 282 (766)
.. .++.+++++|.+++..+..|+.++
T Consensus 199 ~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~ 278 (606)
T 3t6q_A 199 FDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFS 278 (606)
T ss_dssp TTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCT
T ss_pred hhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhcccc
Confidence 21 456778888888887777788888
Q ss_pred CCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCC-CCCCCCCceeec
Q 004232 283 QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKF 361 (766)
Q Consensus 283 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~-~~~~~~l~~l~l 361 (766)
+|++|++++|+++..| ..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++.+|.. +..+++|+.+++
T Consensus 279 ~L~~L~l~~n~l~~lp-~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l 357 (606)
T 3t6q_A 279 GLQELDLTATHLSELP-SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDL 357 (606)
T ss_dssp TCSEEECTTSCCSCCC-SSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEEC
T ss_pred CCCEEeccCCccCCCC-hhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEEC
Confidence 8888888888888544 46788888888888888888777878888888888888888888777654 778888888888
Q ss_pred CCCcCCC
Q 004232 362 RGNCLSS 368 (766)
Q Consensus 362 ~~N~l~~ 368 (766)
++|.+++
T Consensus 358 ~~n~l~~ 364 (606)
T 3t6q_A 358 SHDDIET 364 (606)
T ss_dssp CSSCCCE
T ss_pred CCCcccc
Confidence 8888764
No 267
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.8e-29 Score=267.83 Aligned_cols=246 Identities=19% Similarity=0.259 Sum_probs=219.6
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57899999999999888889999999999999999999888999999999999999999998 5666554 79999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCC--CCC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISG--SLP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEI 274 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~ 274 (766)
++|++++..+..+.++++|+.|++++|.++. ..+ .+..+++|++|++++|.++......+..|+.+++++|++++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888889999999999999999963 333 4788999999999999998766666788999999999999988
Q ss_pred cccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCC--
Q 004232 275 PKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN-- 352 (766)
Q Consensus 275 p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~-- 352 (766)
|..|..+++|+.|++++|++++.++..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+..
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 999999999999999999999999888999999999999999998 88989999999999999999999776666643
Q ss_pred ----CCCCceeecCCCcCC
Q 004232 353 ----ESDKRVVKFRGNCLS 367 (766)
Q Consensus 353 ----~~~l~~l~l~~N~l~ 367 (766)
...++.+++.+|.+.
T Consensus 288 ~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 288 YNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CCTTSCCCSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 356788999999875
No 268
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.97 E-value=7e-30 Score=304.36 Aligned_cols=256 Identities=20% Similarity=0.240 Sum_probs=150.8
Q ss_pred CCCcccCCcccccccCCCCCCEEeccccc-ccc-cCCccccCCC-------CCCEEecccccCccCCCc--cCCCCCCCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLG-IWG-SLPDKIHRLY-------SLEYLDLSSNFLFGSVPP--KISTMVKLQ 169 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~L~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~ 169 (766)
++.|...+.+|..+++|++|+.|+|++|. ++| .+|..|++++ +|++|+|++|+++ .+|. .|.++++|+
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~ 576 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLG 576 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCC
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCC
Confidence 33454555566666666666666666665 555 5565544443 6666666666665 5555 566666666
Q ss_pred EEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCC-CCEEEccCCccCCCCCCCCCCC--CCCEEECCC
Q 004232 170 TLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIST-LSDLDLSKNAISGSLPDLSSLG--SLNVLNLSD 246 (766)
Q Consensus 170 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~l~--~L~~L~ls~ 246 (766)
.|+|++|.++ .+| .|+++++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++..+..+..++ +|+.|++++
T Consensus 577 ~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~ 653 (876)
T 4ecn_A 577 LLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSY 653 (876)
T ss_dssp EEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCS
T ss_pred EEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcC
Confidence 6666666666 555 5666666666666666666 56666666666 6666666666663222233333 366666666
Q ss_pred CCCCCCCCCCC--------CCCcEEEccCCcCccCCccc-ccCCCCCCEEEccCCcCCCCCccccCC-------CCCCCe
Q 004232 247 NKLDSNLPKLP--------RGLVMAFLSNNSFSGEIPKQ-YGQLNQLQQLDMSFNALRGMPPPAIFS-------LPNISD 310 (766)
Q Consensus 247 N~l~~~~p~~~--------~~l~~l~ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~~~~~~~-------l~~L~~ 310 (766)
|++++.+|.++ .+|+.|+|++|+++ .+|.. +..+++|+.|+|++|+++.+++..+.. +++|+.
T Consensus 654 N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~ 732 (876)
T 4ecn_A 654 NKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTT 732 (876)
T ss_dssp SCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCE
T ss_pred CcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccE
Confidence 66666555433 24566666666666 33333 335666666666666666444433322 226666
Q ss_pred EEeecCcCcccCCccCC--CCCCccEEeCcCCccccCCCCCCCCCCCCceeecCC
Q 004232 311 LNLASNKFSGSLPKNLN--CGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (766)
Q Consensus 311 L~L~~N~l~g~~p~~~~--~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (766)
|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++
T Consensus 733 L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 733 IDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp EECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred EECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 666666666 5566554 56666666666666665 566666666666666655
No 269
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=306.56 Aligned_cols=271 Identities=21% Similarity=0.217 Sum_probs=241.5
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccC-CccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSL-PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFF 178 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~-p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 178 (766)
+++.|.+.+..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|.+
T Consensus 30 dLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l 109 (844)
T 3j0a_A 30 LLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGL 109 (844)
T ss_dssp EEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCC
T ss_pred ECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCC
Confidence 56777777777889999999999999999777776 78899999999999999999999999999999999999999999
Q ss_pred CCCCCcc--cCCCCCCCEEEccCccCCCCCC-ccccCCCCCCEEEccCCccCCCCCC-CCCC--CCCCEEECCCCCCCCC
Q 004232 179 NNTIPNW--FDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LSSL--GSLNVLNLSDNKLDSN 252 (766)
Q Consensus 179 ~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l--~~L~~L~ls~N~l~~~ 252 (766)
++.+|.. |+++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..+. +..+ ++|+.|++++|.+.+.
T Consensus 110 ~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~ 189 (844)
T 3j0a_A 110 SDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR 189 (844)
T ss_dssp SSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCC
T ss_pred CcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccc
Confidence 9877765 9999999999999999998765 5799999999999999999987764 5555 8999999999999987
Q ss_pred CCCCC---------CCCcEEEccCCcCccCCcccccC--------------------------------------CCCCC
Q 004232 253 LPKLP---------RGLVMAFLSNNSFSGEIPKQYGQ--------------------------------------LNQLQ 285 (766)
Q Consensus 253 ~p~~~---------~~l~~l~ls~N~l~~~~p~~~~~--------------------------------------l~~L~ 285 (766)
.|... ..|+.+++++|.+++.+|..+.. .++|+
T Consensus 190 ~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~ 269 (844)
T 3j0a_A 190 VSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVR 269 (844)
T ss_dssp CCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCC
T ss_pred cccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCcc
Confidence 66421 13899999999988777665542 26899
Q ss_pred EEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCc
Q 004232 286 QLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNC 365 (766)
Q Consensus 286 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~ 365 (766)
.|++++|.+.+.++..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.
T Consensus 270 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 349 (844)
T 3j0a_A 270 HLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNH 349 (844)
T ss_dssp EEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCC
T ss_pred EEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc
Q 004232 366 LSSNV 370 (766)
Q Consensus 366 l~~~~ 370 (766)
+++..
T Consensus 350 i~~~~ 354 (844)
T 3j0a_A 350 IAIIQ 354 (844)
T ss_dssp CCCCC
T ss_pred CCccC
Confidence 87543
No 270
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=1.7e-29 Score=298.46 Aligned_cols=241 Identities=22% Similarity=0.201 Sum_probs=151.3
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
+++.|...+..+..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.++
T Consensus 31 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~ 110 (680)
T 1ziw_A 31 NLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ 110 (680)
T ss_dssp ECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC
T ss_pred ECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccC
Confidence 34445444444456777777777777777777777777777777777777777776544446777777777777777777
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC---CCCCCCCCEEECCCCCCCCCCCCC
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD---LSSLGSLNVLNLSDNKLDSNLPKL 256 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~l~~L~~L~ls~N~l~~~~p~~ 256 (766)
+..|..|+++++|++|+|++|++++..|..+.++++|++|+|++|.+++..+. ...+++|++|++++|.+++..|..
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 190 (680)
T 1ziw_A 111 KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190 (680)
T ss_dssp CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTG
T ss_pred ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhh
Confidence 66666777777777777777777776666777777777777777777665543 234466677777777666554431
Q ss_pred C------------------------------CCCcEEEccCCcCccCCcccccCCCC--CCEEEccCCcCCCCCccccCC
Q 004232 257 P------------------------------RGLVMAFLSNNSFSGEIPKQYGQLNQ--LQQLDMSFNALRGMPPPAIFS 304 (766)
Q Consensus 257 ~------------------------------~~l~~l~ls~N~l~~~~p~~~~~l~~--L~~L~ls~N~l~~~~~~~~~~ 304 (766)
. ..++.+++++|++++..|..|..++. |+.|++++|++++.+|..|..
T Consensus 191 ~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~ 270 (680)
T 1ziw_A 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270 (680)
T ss_dssp GGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTT
T ss_pred hhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccC
Confidence 0 23455555666665555555555533 666666666666555555555
Q ss_pred CCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCC
Q 004232 305 LPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN 340 (766)
Q Consensus 305 l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N 340 (766)
+++|+.|+|++|++++..|..+..+.+|+.|++++|
T Consensus 271 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~ 306 (680)
T 1ziw_A 271 LPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306 (680)
T ss_dssp CTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTC
T ss_pred cccccEeeCCCCccCccChhhhcCCCCccEEeccch
Confidence 666666666666665555555544444444444443
No 271
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.97 E-value=1.9e-29 Score=293.96 Aligned_cols=112 Identities=21% Similarity=0.221 Sum_probs=87.4
Q ss_pred CCEEEEEeCCCCCCCCC--CCCccc-cccccCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEec
Q 004232 73 NFITELKIIGDKPSNVG--NFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDL 149 (766)
Q Consensus 73 ~~v~~l~l~~~~~~~~~--~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~L 149 (766)
..++.++++++.+.+.. .|.++. .....++.|...+..|..|+++++|++|+|++|.+.+..|..|+++++|++|+|
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 35778888776554321 222211 112356777776767889999999999999999999888888999999999999
Q ss_pred ccccCcc-CCCccCCCCCCCCEEEccCCcCCCCCCc
Q 004232 150 SSNFLFG-SVPPKISTMVKLQTLILDDNFFNNTIPN 184 (766)
Q Consensus 150 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 184 (766)
++|.+.+ .+|..|+++++|++|+|++|++++..|.
T Consensus 136 ~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred CCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 9999986 5799999999999999999988765544
No 272
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=4.6e-31 Score=284.39 Aligned_cols=248 Identities=16% Similarity=0.160 Sum_probs=166.3
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCCh--------hhhHHHHHHHHHHHHhCC---------CCCcccc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKLR---------HPHLVCL 544 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~e~~~l~~l~---------Hpniv~l 544 (766)
.++|++.+.||+|+||+||+|+. +|+.||||+++... ....+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35678889999999999999987 68999999997542 223477889999999886 5555555
Q ss_pred cc-----------------eeecCCCCC-----CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHH
Q 004232 545 LG-----------------HCIDGGGRD-----DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKA 602 (766)
Q Consensus 545 ~g-----------------~~~~~~~~~-----~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~g 602 (766)
.+ ++.+..+.. .......++||||+++|++.+.+.+ ..+++.....++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 44 443310000 0012478999999999987776643 237899999999999999
Q ss_pred HHHHh-cCCCCCcccCCCCCCceEEcCCC--------------------cEEEecCCCCcccccccccccCC-CCCCcc-
Q 004232 603 VQFLH-TGVIPGFFNNRVKTNNILLNEHR--------------------IAKLSDYGLSIVSEDINSVGGKQ-EDPNSW- 659 (766)
Q Consensus 603 L~yLH-~~~~~~ivHrdlk~~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~-~~~~~~- 659 (766)
|+||| +. +|+||||||+|||++.++ .+||+|||+|+........++.. ..|...
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc
Confidence 99999 76 899999999999999886 89999999998765433222211 111111
Q ss_pred cCCCCCCCEeehhHH-HHHHhcCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCC
Q 004232 660 EMTKLEDDVFSFGFM-LLESVAGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESW 738 (766)
Q Consensus 660 ~~~~~~~DV~SfGvi-l~ElltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~ 738 (766)
...+.++||||+|++ .+++++|..|+.... +.......+....... ..............+.+|+.+|++.|
T Consensus 251 g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~dli~~~L~~d-- 323 (336)
T 2vuw_A 251 GDGDYQFDIYRLMKKENNNRWGEYHPYSNVL-WLHYLTDKMLKQMTFK----TKCNTPAMKQIKRKIQEFHRTMLNFS-- 323 (336)
T ss_dssp CCSSHHHHHHHHHHHHHTTCTTSCCTHHHHH-HHHHHHHHHHHTCCCS----SCCCSHHHHHHHHHHHHHHHHGGGSS--
T ss_pred CCCccceehhhhhCCCCcccccccCCCcchh-hhhHHHHhhhhhhccC----cccchhhhhhcCHHHHHHHHHHhccC--
Confidence 122567899998776 888999998875210 0011111111000000 00000111233456889999999976
Q ss_pred CCCCHHHHH
Q 004232 739 SRPSFEDIL 747 (766)
Q Consensus 739 ~RPs~~ev~ 747 (766)
|++|++
T Consensus 324 ---sa~e~l 329 (336)
T 2vuw_A 324 ---SATDLL 329 (336)
T ss_dssp ---SHHHHH
T ss_pred ---CHHHHH
Confidence 888876
No 273
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=5.9e-29 Score=267.41 Aligned_cols=245 Identities=21% Similarity=0.233 Sum_probs=216.2
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999998 5666554 89999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCC--CCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISG--SLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEI 274 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~ 274 (766)
++|++++..+..|..+++|+.|++++|.++. ..+. +..+ +|++|++++|++++....++..|+.+++++|++++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999997777789999999999999999963 4443 6666 9999999999998866667788999999999999988
Q ss_pred cccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCC-
Q 004232 275 PKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNE- 353 (766)
Q Consensus 275 p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~- 353 (766)
|..|..+++|+.|++++|++++.++..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+...
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 899999999999999999999999888999999999999999998 788889999999999999999997777666543
Q ss_pred -----CCCceeecCCCcCC
Q 004232 354 -----SDKRVVKFRGNCLS 367 (766)
Q Consensus 354 -----~~l~~l~l~~N~l~ 367 (766)
..++.+++.+|.+.
T Consensus 289 ~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CCSSSCCBSEEECCSSSSC
T ss_pred cccccccccceEeecCccc
Confidence 56788999999875
No 274
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=8.6e-29 Score=285.71 Aligned_cols=263 Identities=25% Similarity=0.277 Sum_probs=184.2
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
++++|.+.+..+..|.++++|++|+|++|.+++..|+.|.++++|++|||++|+++ .+|.. .+++|++|+|++|+++
T Consensus 58 ~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~ 134 (562)
T 3a79_B 58 SLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFD 134 (562)
T ss_dssp ECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCS
T ss_pred ECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCcc
Confidence 46666666656678888888888888888888888888888888888888888887 46655 7888888888888887
Q ss_pred C-CCCcccCCCCCCCEEEccCccCCC-------------------------CCCccccCCC-------------------
Q 004232 180 N-TIPNWFDSLPSLTFLSMRNNKLAG-------------------------PFPSSIQRIS------------------- 214 (766)
Q Consensus 180 ~-~~p~~~~~l~~L~~L~L~~N~l~~-------------------------~~p~~~~~l~------------------- 214 (766)
+ .+|..|+++++|++|+|++|++++ ..|..+..+.
T Consensus 135 ~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~ 214 (562)
T 3a79_B 135 VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVN 214 (562)
T ss_dssp BCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCE
T ss_pred ccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhh
Confidence 6 346778888888888888877653 2333333222
Q ss_pred --------------------------------------------------------------CCCEEEccCCccCCCCCC
Q 004232 215 --------------------------------------------------------------TLSDLDLSKNAISGSLPD 232 (766)
Q Consensus 215 --------------------------------------------------------------~L~~L~Ls~N~l~~~~p~ 232 (766)
+|++|++++|.++|.+|.
T Consensus 215 ~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~ 294 (562)
T 3a79_B 215 MSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDR 294 (562)
T ss_dssp EEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCC
T ss_pred hcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccc
Confidence 455556666666655543
Q ss_pred -C-----------------------------------------------------CCCCCCCEEECCCCCCCCCCCCC--
Q 004232 233 -L-----------------------------------------------------SSLGSLNVLNLSDNKLDSNLPKL-- 256 (766)
Q Consensus 233 -~-----------------------------------------------------~~l~~L~~L~ls~N~l~~~~p~~-- 256 (766)
+ ..+++|++|++++|++++.+|..
T Consensus 295 ~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 374 (562)
T 3a79_B 295 EEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCS 374 (562)
T ss_dssp CCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCC
T ss_pred hhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccchhhhhc
Confidence 2 45567777777777777655543
Q ss_pred -CCCCcEEEccCCcCcc--CCcccccCCCCCCEEEccCCcCCC-CCccccCCCCCCCeEEeecCcCcccCCccCCCCCCc
Q 004232 257 -PRGLVMAFLSNNSFSG--EIPKQYGQLNQLQQLDMSFNALRG-MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKL 332 (766)
Q Consensus 257 -~~~l~~l~ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L 332 (766)
...|+.+++++|++++ .+|..|+.+++|+.|++++|++++ .++..+..+++|+.|+|++|++++.+|..+. ++|
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 2456777777777775 234567777777777777777777 4444566677777777777777766665543 577
Q ss_pred cEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 333 VFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 333 ~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+.|++++|+++ .+|..+..+++|+.|++++|.++.
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC
Confidence 77888888777 567666677788888888887774
No 275
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=4.3e-29 Score=285.43 Aligned_cols=132 Identities=22% Similarity=0.266 Sum_probs=83.1
Q ss_pred CCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCcc--CCcccccCCCCCCEEEccCCcCCC-CCccccCCCCC
Q 004232 234 SSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSG--EIPKQYGQLNQLQQLDMSFNALRG-MPPPAIFSLPN 307 (766)
Q Consensus 234 ~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~ 307 (766)
..+++|++|++++|++++.+|.. ...|+.+++++|++++ .+|..++.+++|++|++++|++++ .++..+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 45556666666666666654432 2456666666666665 445566666666666666666666 33334566666
Q ss_pred CCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 308 ISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 308 L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
|+.|+|++|++++.+|..+. .+|+.||+++|+++ .+|..+..+++|+.+++++|.++.
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 66666666666666655543 56677777777776 566666666777777777776663
No 276
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.96 E-value=1.6e-30 Score=288.04 Aligned_cols=247 Identities=14% Similarity=0.132 Sum_probs=165.6
Q ss_pred HhcCCCcCCceecCCceeEEEEEe-cCCceEEEEEccCChh---hhHHHHHHHHHHHHhCCC-CCcccccce--------
Q 004232 481 ATNNFDMSAIMGEGSYGKLYKGRL-ENGTSVAIRCLPSSKK---YTVRNLKLRLDLLAKLRH-PHLVCLLGH-------- 547 (766)
Q Consensus 481 ~~~~f~~~~~lG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~e~~~l~~l~H-pniv~l~g~-------- 547 (766)
.+..|...++||+|+||+||+|+. .+|+.||||++..... ...+.+++|+.+++.++| +|......+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345577788999999999999994 5799999999874322 235779999999999987 433222211
Q ss_pred -eecCCCC---------CCcCcceEEEEEEccCCCChhhhhhc----CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 004232 548 -CIDGGGR---------DDYAVNKVFLVYEFMSNGNFRTHISE----NTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPG 613 (766)
Q Consensus 548 -~~~~~~~---------~~~~~~~~~lv~Ey~~~GsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 613 (766)
+...+.. ........+++|+++ +|+|.+++.. ......++|..++.++.|+++||+|||+. +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1111000 000012356777754 5799988742 11223478889999999999999999997 8
Q ss_pred cccCCCCCCceEEcCCCcEEEecCCCCcccccccccccCCC--CCC------------cccCCCCCCCEeehhHHHHHHh
Q 004232 614 FFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGGKQE--DPN------------SWEMTKLEDDVFSFGFMLLESV 679 (766)
Q Consensus 614 ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~--~~~------------~~~~~~~~~DV~SfGvil~Ell 679 (766)
|+||||||+|||++.++.+||+|||+++............. .|. ....++.++|||||||++|||+
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ell 311 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIW 311 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999865443211111010 111 1112345789999999999999
Q ss_pred cCCCccccCccchHHHHhhhhcccCccccccccccCCCCHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 004232 680 AGPSVAARKGQFLQEELDSLNSQEGRQRLVDPVVMATSSLESLSIVISIANKCICSESWSRPSFEDILW 748 (766)
Q Consensus 680 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~ev~~ 748 (766)
||+.||...... .....++... ...+ ..+.+|+.+||+.||.+||++.|+++
T Consensus 312 tg~~Pf~~~~~~-----------~~~~~~~~~~--~~~~----~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 312 CADLPNTDDAAL-----------GGSEWIFRSC--KNIP----QPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HSSCCCCTTGGG-----------SCSGGGGSSC--CCCC----HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HCCCCCCCcchh-----------hhHHHHHhhc--ccCC----HHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999998643211 0011111100 0112 33778999999999999999777743
No 277
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=2.9e-29 Score=283.67 Aligned_cols=252 Identities=21% Similarity=0.205 Sum_probs=232.0
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 47899999999999999999999999999999999999988999999999999999999999877788999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCC---CCCCCcEEEccCCcCccC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPK---LPRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~---~~~~l~~l~ls~N~l~~~ 273 (766)
++|++++..|..|..+++|+.|+|++|.+++..+ .+..+++|++|++++|++++..+. -..+|+.+++++|.+++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 9999999999999999999999999999998766 488999999999999999876543 246899999999999998
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCC
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNE 353 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~ 353 (766)
.+..|..+++|+.|++++|.+.+.+|.......+|+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 271 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHEL 271 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccc
Confidence 88899999999999999999888887777778899999999999995544678899999999999999999888899999
Q ss_pred CCCceeecCCCcCCCC
Q 004232 354 SDKRVVKFRGNCLSSN 369 (766)
Q Consensus 354 ~~l~~l~l~~N~l~~~ 369 (766)
++|+.|++++|.+++.
T Consensus 272 ~~L~~L~L~~n~l~~~ 287 (477)
T 2id5_A 272 LRLQEIQLVGGQLAVV 287 (477)
T ss_dssp TTCCEEECCSSCCSEE
T ss_pred ccCCEEECCCCccceE
Confidence 9999999999998864
No 278
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.2e-29 Score=272.01 Aligned_cols=204 Identities=22% Similarity=0.299 Sum_probs=127.9
Q ss_pred CCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEE
Q 004232 141 LYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLD 220 (766)
Q Consensus 141 L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 220 (766)
..+++.|+|++|.+. .+|+.++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 455666666666665 56666666666666666666666 56666666666666666666666 5666666666666666
Q ss_pred ccCCccCCCCCC-CC---------CCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEcc
Q 004232 221 LSKNAISGSLPD-LS---------SLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMS 290 (766)
Q Consensus 221 Ls~N~l~~~~p~-~~---------~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls 290 (766)
|++|++.+.+|. +. .+++|++|++++|++ + .+|..++.+++|+.|+|+
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l---------------------~-~lp~~l~~l~~L~~L~L~ 214 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGI---------------------R-SLPASIANLQNLKSLKIR 214 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECC---------------------C-CCCGGGGGCTTCCEEEEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCc---------------------C-cchHhhcCCCCCCEEEcc
Confidence 666666665553 22 244444444444333 2 355556666666666666
Q ss_pred CCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCCc
Q 004232 291 FNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNV 370 (766)
Q Consensus 291 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 370 (766)
+|++++.++ .+..+++|+.|+|++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+
T Consensus 215 ~N~l~~l~~-~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i 293 (328)
T 4fcg_A 215 NSPLSALGP-AIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL 293 (328)
T ss_dssp SSCCCCCCG-GGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC
T ss_pred CCCCCcCch-hhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc
Confidence 666666444 4666666666666666666666666666666666666666666666666666666666666666665543
No 279
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=1.1e-28 Score=265.39 Aligned_cols=259 Identities=22% Similarity=0.232 Sum_probs=223.7
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.++.|...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++ .+|..+. ++|++|++++|.++
T Consensus 60 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~ 136 (332)
T 2ft3_A 60 DLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIR 136 (332)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccC
Confidence 46666655555678999999999999999999999999999999999999999997 6777666 89999999999999
Q ss_pred CCCCcccCCCCCCCEEEccCccCC--CCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC-
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLA--GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL- 256 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~- 256 (766)
+..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|.+++.+..+. ++|++|++++|.+++..+..
T Consensus 137 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l 213 (332)
T 2ft3_A 137 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDL 213 (332)
T ss_dssp CCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSS
T ss_pred ccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHh
Confidence 887888999999999999999996 4778888888 99999999999998554444 79999999999999877653
Q ss_pred --CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCC------
Q 004232 257 --PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNC------ 328 (766)
Q Consensus 257 --~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~------ 328 (766)
...|+.|++++|++++..|..|+.+++|+.|++++|+++.++ ..+..+++|+.|+|++|++++..+..+..
T Consensus 214 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp-~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 292 (332)
T 2ft3_A 214 LRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVP-AGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVK 292 (332)
T ss_dssp TTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCC-TTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSS
T ss_pred cCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecC-hhhhcCccCCEEECCCCCCCccChhHccccccccc
Confidence 357899999999999988889999999999999999999654 56899999999999999999776666654
Q ss_pred CCCccEEeCcCCccc--cCCCCCCCCCCCCceeecCCCc
Q 004232 329 GGKLVFFDISNNKLT--GGLPSCLSNESDKRVVKFRGNC 365 (766)
Q Consensus 329 ~~~L~~L~ls~N~l~--g~~p~~~~~~~~l~~l~l~~N~ 365 (766)
...|+.|++++|.++ +..|..+..+++++.+++++|.
T Consensus 293 ~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 293 RAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 357899999999987 6777888899999999998874
No 280
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=4.9e-28 Score=259.99 Aligned_cols=260 Identities=22% Similarity=0.192 Sum_probs=223.4
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.++.|...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++ .+|..+. ++|++|++++|.++
T Consensus 58 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 134 (330)
T 1xku_A 58 DLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEIT 134 (330)
T ss_dssp ECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCC
T ss_pred ECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCccc
Confidence 46666655555568999999999999999999999999999999999999999997 5776665 79999999999999
Q ss_pred CCCCcccCCCCCCCEEEccCccCC--CCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC-
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLA--GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL- 256 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~- 256 (766)
+..+..|.++++|++|++++|.++ +..+..+..+++|++|++++|.++.....+. ++|++|++++|++++..|..
T Consensus 135 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~ 212 (330)
T 1xku_A 135 KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASL 212 (330)
T ss_dssp BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGG
T ss_pred ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHh
Confidence 988889999999999999999996 4778899999999999999999987544443 89999999999998876643
Q ss_pred --CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCC------
Q 004232 257 --PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNC------ 328 (766)
Q Consensus 257 --~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~------ 328 (766)
..+|+.|++++|++++..+..|..+++|+.|++++|+++.+ |..+..+++|++|+|++|++++..+..+..
T Consensus 213 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l-p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~ 291 (330)
T 1xku_A 213 KGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTK 291 (330)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSC-CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTT
T ss_pred cCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccC-ChhhccCCCcCEEECCCCcCCccChhhcCCcccccc
Confidence 35799999999999998888999999999999999999965 457899999999999999999776666643
Q ss_pred CCCccEEeCcCCcccc--CCCCCCCCCCCCceeecCCCc
Q 004232 329 GGKLVFFDISNNKLTG--GLPSCLSNESDKRVVKFRGNC 365 (766)
Q Consensus 329 ~~~L~~L~ls~N~l~g--~~p~~~~~~~~l~~l~l~~N~ 365 (766)
...++.+++++|.+.. ..|..+..+..++.+++++|+
T Consensus 292 ~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 292 KASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3678999999999863 566778888999999999884
No 281
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=283.79 Aligned_cols=136 Identities=23% Similarity=0.214 Sum_probs=100.1
Q ss_pred CCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcCccCCc-ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCe
Q 004232 234 SSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISD 310 (766)
Q Consensus 234 ~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 310 (766)
..+++|++|++++|.+++..+.+ ...|+.+++++|.+++..| ..+..+++|+.|++++|.+++.+|..+..+++|+.
T Consensus 370 ~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 449 (570)
T 2z63_A 370 FGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 449 (570)
T ss_dssp HTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred cccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcE
Confidence 34667788888888776544332 3467777788877777655 46777777888888888777777777777777888
Q ss_pred EEeecCcCc-ccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCC
Q 004232 311 LNLASNKFS-GSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 311 L~L~~N~l~-g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~ 369 (766)
|+|++|.++ +.+|..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+++.
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 509 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSV 509 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCC
Confidence 888877776 56777777777777778877777777777777777777777777777654
No 282
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.96 E-value=5e-29 Score=284.89 Aligned_cols=262 Identities=22% Similarity=0.233 Sum_probs=185.9
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
+++.|...+..|..|.++++|++|+|++|.+.+..|+.|+++++|++|||++|+++ .+|.. .+++|++|+|++|.++
T Consensus 27 ~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~ 103 (520)
T 2z7x_B 27 NISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFD 103 (520)
T ss_dssp ECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCS
T ss_pred ECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccc
Confidence 56777776666788999999999999999999988999999999999999999998 56766 8999999999999998
Q ss_pred C-CCCcccCCCCCCCEEEccCccCCCCCCccccCCCCC--CEEEccCCcc--CCCCCC-CCCCC----------------
Q 004232 180 N-TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL--SDLDLSKNAI--SGSLPD-LSSLG---------------- 237 (766)
Q Consensus 180 ~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~-~~~l~---------------- 237 (766)
+ .+|..|+++++|++|++++|++++ ..+..+++| +.|+|++|.+ .+..|. +..+.
T Consensus 104 ~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~ 180 (520)
T 2z7x_B 104 ALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHF 180 (520)
T ss_dssp SCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCC
T ss_pred cccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhh
Confidence 7 578999999999999999999986 457777888 9999999998 555443 33322
Q ss_pred -------------------------------------------------------------------CCCEEECCCCCCC
Q 004232 238 -------------------------------------------------------------------SLNVLNLSDNKLD 250 (766)
Q Consensus 238 -------------------------------------------------------------------~L~~L~ls~N~l~ 250 (766)
+|++|++++|+++
T Consensus 181 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 260 (520)
T 2z7x_B 181 ILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQ 260 (520)
T ss_dssp CCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEE
T ss_pred hhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeeccccc
Confidence 4555555555555
Q ss_pred CCCCCCC--------CC--------------------------CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCC
Q 004232 251 SNLPKLP--------RG--------------------------LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRG 296 (766)
Q Consensus 251 ~~~p~~~--------~~--------------------------l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 296 (766)
|.+|... .. ++.+++++|.+.... .+..+++|++|++++|++++
T Consensus 261 ~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~ 338 (520)
T 2z7x_B 261 GQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTD 338 (520)
T ss_dssp SCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCT
T ss_pred CccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccCh
Confidence 4444321 11 222222222222110 01456677777777777777
Q ss_pred CCccccCCCCCCCeEEeecCcCcc--cCCccCCCCCCccEEeCcCCccccCCCCC-CCCCCCCceeecCCCcCCCC
Q 004232 297 MPPPAIFSLPNISDLNLASNKFSG--SLPKNLNCGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 297 ~~~~~~~~l~~L~~L~L~~N~l~g--~~p~~~~~~~~L~~L~ls~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~~ 369 (766)
.+|..+..+++|+.|+|++|++++ .+|..+..+++|+.|++++|++++.+|.. +..+++|+.+++++|.+++.
T Consensus 339 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 414 (520)
T 2z7x_B 339 TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDT 414 (520)
T ss_dssp TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGG
T ss_pred hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcc
Confidence 666667777777777777777765 45556666777777777777777645543 55666777777777766643
No 283
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=5.3e-28 Score=271.36 Aligned_cols=225 Identities=25% Similarity=0.253 Sum_probs=169.6
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|++.+..|+.|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999999999999999999999999999988899999999999999999999888888999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC--CCCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcCccC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~~~ 273 (766)
++|+++...+..|.++++|+.|+|++|+..+.++. +..+++|++|+|++|++++. |.+ ..+|+.|+|++|++++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 99999987777899999999999999655555553 78899999999999988753 332 23455555555555555
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccc
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~ 343 (766)
.|..|..+++|+.|++++|++++.++..|..+++|+.|+|++|+|++..+..+..+.+|+.|+|++|.+.
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 5555555555555555555555555555555555555555555555444444455555555555555544
No 284
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.96 E-value=9.9e-28 Score=276.84 Aligned_cols=288 Identities=19% Similarity=0.167 Sum_probs=213.3
Q ss_pred CEEEEEeCCCCCCCCC--CCCcccc-ccccCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecc
Q 004232 74 FITELKIIGDKPSNVG--NFDGFAS-ANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (766)
Q Consensus 74 ~v~~l~l~~~~~~~~~--~~~~~~~-~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls 150 (766)
.++.++++++.+.+.. .|.++.. ....++.|.+.+..|..|.++++|++|+|++|.++ .+|.. .+++|++|+|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLS 129 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECC
Confidence 4566666655544332 1221111 12244555554445566777777777777777765 45544 66667777777
Q ss_pred cccCcc-CCCccCCCCCCCCEEEccCCcCC-------------------------CCCCcccCCCC--------------
Q 004232 151 SNFLFG-SVPPKISTMVKLQTLILDDNFFN-------------------------NTIPNWFDSLP-------------- 190 (766)
Q Consensus 151 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~-------------------------~~~p~~~~~l~-------------- 190 (766)
+|++++ .+|..|+++++|++|+|++|.++ +..|..+..+.
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~ 209 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLF 209 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCC
T ss_pred CCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccch
Confidence 776665 23456666666666666666553 34444444433
Q ss_pred -------------------------------------------------------------------CCCEEEccCccCC
Q 004232 191 -------------------------------------------------------------------SLTFLSMRNNKLA 203 (766)
Q Consensus 191 -------------------------------------------------------------------~L~~L~L~~N~l~ 203 (766)
+|++|++++|+++
T Consensus 210 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 289 (562)
T 3a79_B 210 SVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTIT 289 (562)
T ss_dssp CCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEEC
T ss_pred hhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEee
Confidence 6778888888888
Q ss_pred CCCCccc-----------------------------------------------------cCCCCCCEEEccCCccCCCC
Q 004232 204 GPFPSSI-----------------------------------------------------QRISTLSDLDLSKNAISGSL 230 (766)
Q Consensus 204 ~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~N~l~~~~ 230 (766)
|.+|..+ ..+++|++|+|++|.+++.+
T Consensus 290 ~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 369 (562)
T 3a79_B 290 ERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSV 369 (562)
T ss_dssp SCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTT
T ss_pred ccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCccccch
Confidence 8888765 67889999999999999966
Q ss_pred C-CCCCCCCCCEEECCCCCCCCCC--CC---CCCCCcEEEccCCcCccCCcc-cccCCCCCCEEEccCCcCCCCCccccC
Q 004232 231 P-DLSSLGSLNVLNLSDNKLDSNL--PK---LPRGLVMAFLSNNSFSGEIPK-QYGQLNQLQQLDMSFNALRGMPPPAIF 303 (766)
Q Consensus 231 p-~~~~l~~L~~L~ls~N~l~~~~--p~---~~~~l~~l~ls~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~~~~~~ 303 (766)
| .+..+++|++|++++|++++.. |. -...|+.+++++|++++.+|. .+..+++|+.|++++|++++..|..+.
T Consensus 370 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 449 (562)
T 3a79_B 370 FQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP 449 (562)
T ss_dssp TTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC
T ss_pred hhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc
Confidence 6 4899999999999999998732 22 246799999999999985665 588999999999999999987776554
Q ss_pred CCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCC-CCCCCCCceeecCCCcCCC
Q 004232 304 SLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC-LSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 304 ~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~-~~~~~~l~~l~l~~N~l~~ 368 (766)
++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ .+|.. +..+++++.+++++|.+.+
T Consensus 450 --~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 450 --PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp --TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCC
T ss_pred --CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCC
Confidence 79999999999999 78888889999999999999999 56665 8999999999999999875
No 285
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=7.8e-28 Score=269.03 Aligned_cols=225 Identities=26% Similarity=0.234 Sum_probs=162.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|+.|+|++|++.+..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|+++...+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57899999999999999999999999999999999999888899999999999999999999877788999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC--CCCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcCccC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD--LSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~~~ 273 (766)
++|+++...+..|..+++|++|+|++|+..+.++. +.++++|++|++++|+++. +|.+ ..+|+.|+|++|++++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 99999987778899999999999999655555553 7889999999999998873 2322 12344444444444444
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccc
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~ 343 (766)
.|..|..+++|+.|+|++|++++.++..|..+++|+.|+|++|++++..+..+..+.+|+.|+|++|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 4444444444444444444444444444444444444444444444433334444444444444444443
No 286
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=4.4e-28 Score=281.58 Aligned_cols=258 Identities=21% Similarity=0.167 Sum_probs=220.0
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.++.|.+.+..|..|+++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.++
T Consensus 81 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 160 (597)
T 3oja_B 81 NLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE 160 (597)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCC
Confidence 45666666656679999999999999999999999999999999999999999999766666799999999999999999
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCC-------------------CCCCCCCCCCCC
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISG-------------------SLPDLSSLGSLN 240 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------------------~~p~~~~l~~L~ 240 (766)
+..|..|+++++|++|+|++|.+++.. +..+++|+.|++++|.+++ ..+. ..++|+
T Consensus 161 ~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~--~~~~L~ 235 (597)
T 3oja_B 161 RIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP--VNVELT 235 (597)
T ss_dssp BCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS--CCSCCC
T ss_pred CCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc--cCCCCC
Confidence 999999999999999999999998753 3445566666666555543 2222 236899
Q ss_pred EEECCCCCCCCCCCCC--CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcC
Q 004232 241 VLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKF 318 (766)
Q Consensus 241 ~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 318 (766)
.|+|++|.+++. +.+ ..+|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++++ ..+..+++|+.|+|++|.+
T Consensus 236 ~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~Ls~N~l 313 (597)
T 3oja_B 236 ILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALN-LYGQPIPTLKVLDLSHNHL 313 (597)
T ss_dssp EEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEE-CSSSCCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCC-cccccCCCCcEEECCCCCC
Confidence 999999999874 332 468999999999999999999999999999999999999964 4677899999999999999
Q ss_pred cccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 319 SGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 319 ~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+ .+|..+..+++|+.|+|++|.+++. | +..++.|+.|++++|.+++
T Consensus 314 ~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 314 L-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp C-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred C-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCC
Confidence 9 6888888899999999999999865 3 5677899999999998874
No 287
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.95 E-value=9.4e-28 Score=277.40 Aligned_cols=297 Identities=20% Similarity=0.198 Sum_probs=209.3
Q ss_pred CEEEEEeCCCCCCCCC--CCCcccc-ccccCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecc
Q 004232 74 FITELKIIGDKPSNVG--NFDGFAS-ANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (766)
Q Consensus 74 ~v~~l~l~~~~~~~~~--~~~~~~~-~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls 150 (766)
.++.++++++.+.+.. .|.++.. ...+++.|...+..+..|.++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 4677787776554322 2222111 123456665555455678888888888888888888888888888888888888
Q ss_pred cccCccCCCccCCCCCCCCEEEccCCcCCC-CCCcccCCCCCCCEEEccCccCCCCCCccccCCCC--------------
Q 004232 151 SNFLFGSVPPKISTMVKLQTLILDDNFFNN-TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIST-------------- 215 (766)
Q Consensus 151 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-------------- 215 (766)
+|++++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.+++
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 888876655578888889999999888887 46888888889999988888877655544433333
Q ss_pred --------------------------------------------------------------------------------
Q 004232 216 -------------------------------------------------------------------------------- 215 (766)
Q Consensus 216 -------------------------------------------------------------------------------- 215 (766)
T Consensus 189 l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 268 (570)
T 2z63_A 189 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 268 (570)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETT
T ss_pred ceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcch
Confidence
Q ss_pred ---------------CCEEEccCCccCCCCCCCCC------------------------------------------CCC
Q 004232 216 ---------------LSDLDLSKNAISGSLPDLSS------------------------------------------LGS 238 (766)
Q Consensus 216 ---------------L~~L~Ls~N~l~~~~p~~~~------------------------------------------l~~ 238 (766)
|+.|++++|.+++.++.+.. +++
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 348 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 348 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTT
T ss_pred hhhhhchhhhcCcCcccEEEecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCC
Confidence 33333333333322111222 222
Q ss_pred CCEEECCCCCCCCCC--CC---CCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCc-cccCCCCCCCeEE
Q 004232 239 LNVLNLSDNKLDSNL--PK---LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPP-PAIFSLPNISDLN 312 (766)
Q Consensus 239 L~~L~ls~N~l~~~~--p~---~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~ 312 (766)
|++|++++|.+++.. |. -...|+.+++++|.+++..+ .+..+++|+.|++++|.+++.++ ..+..+++|+.|+
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 427 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEE
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEe
Confidence 222233333222110 00 01345555666666654333 38888999999999999998876 5788999999999
Q ss_pred eecCcCcccCCccCCCCCCccEEeCcCCccc-cCCCCCCCCCCCCceeecCCCcCCCCcC
Q 004232 313 LASNKFSGSLPKNLNCGGKLVFFDISNNKLT-GGLPSCLSNESDKRVVKFRGNCLSSNVQ 371 (766)
Q Consensus 313 L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~-g~~p~~~~~~~~l~~l~l~~N~l~~~~~ 371 (766)
+++|.+++..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++..+
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECT
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCCh
Confidence 9999999999999999999999999999998 6899999999999999999999886433
No 288
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=7.4e-29 Score=285.38 Aligned_cols=267 Identities=22% Similarity=0.223 Sum_probs=179.9
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
+++.|...+..|..+.++++|++|+|++|.+.+..|+.|+++++|++|||++|.+++..|..|+++++|++|+|++|.++
T Consensus 32 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 111 (549)
T 2z81_A 32 DLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQ 111 (549)
T ss_dssp ECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCS
T ss_pred ECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCccc
Confidence 45555544445566777777777777777777777777777777777777777777666666777777777777777777
Q ss_pred C-CCCcccCCCCCCCEEEccCccCCCCCC-ccccCCCCCCEEEccCCccCCCCCC-CC----------------------
Q 004232 180 N-TIPNWFDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LS---------------------- 234 (766)
Q Consensus 180 ~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~---------------------- 234 (766)
+ ..|..|+++++|++|++++|++.+.+| ..+.++++|++|++++|.+++.+|. +.
T Consensus 112 ~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~ 191 (549)
T 2z81_A 112 TLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIF 191 (549)
T ss_dssp SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHH
T ss_pred ccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhh
Confidence 5 356677777777777777777444444 4677777777777777777765442 22
Q ss_pred --CCCCCCEEECCCCCCCCCC----C--CCCC------------------------------------------------
Q 004232 235 --SLGSLNVLNLSDNKLDSNL----P--KLPR------------------------------------------------ 258 (766)
Q Consensus 235 --~l~~L~~L~ls~N~l~~~~----p--~~~~------------------------------------------------ 258 (766)
.+++|++|++++|++++.. + ....
T Consensus 192 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~ 271 (549)
T 2z81_A 192 ADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP 271 (549)
T ss_dssp HHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCC
T ss_pred HhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccc
Confidence 3678888888888887631 0 0111
Q ss_pred ---------------------------------------CCcEEEccCCcCccCCcccc-cCCCCCCEEEccCCcCCCCC
Q 004232 259 ---------------------------------------GLVMAFLSNNSFSGEIPKQY-GQLNQLQQLDMSFNALRGMP 298 (766)
Q Consensus 259 ---------------------------------------~l~~l~ls~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~ 298 (766)
.++.+++++|+++ .+|..+ ..+++|+.|++++|++++..
T Consensus 272 ~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~ 350 (549)
T 2z81_A 272 SESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEY 350 (549)
T ss_dssp CTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHH
T ss_pred cchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCcccccc
Confidence 2334444444443 344444 45777777777777777755
Q ss_pred c---cccCCCCCCCeEEeecCcCcccCC--ccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 299 P---PAIFSLPNISDLNLASNKFSGSLP--KNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 299 ~---~~~~~l~~L~~L~L~~N~l~g~~p--~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
| ..+..+++|+.|+|++|++++..+ ..+..+++|+.||+++|+++ .+|..+..+++|+.|++++|.++.
T Consensus 351 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~ 424 (549)
T 2z81_A 351 LKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV 424 (549)
T ss_dssp HHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC
T ss_pred ccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc
Confidence 3 235667777777777777765422 34667777888888888777 567777777778888888877763
No 289
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.6e-28 Score=266.27 Aligned_cols=251 Identities=20% Similarity=0.205 Sum_probs=213.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 47999999999999887778999999999999999999888889999999999999999999766666999999999999
Q ss_pred cCccCCCCCC-ccccCCCCCCEEEccCCc-cCCCCC-CCCCCCCCCEEECCCCCCCCCCCCCC---CCCcEEEccCCcCc
Q 004232 198 RNNKLAGPFP-SSIQRISTLSDLDLSKNA-ISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKLP---RGLVMAFLSNNSFS 271 (766)
Q Consensus 198 ~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~l~ls~N~l~ 271 (766)
++|++++..+ ..+..+++|++|++++|. +++..+ .+..+++|++|++++|.+++..|... .+|+.+++++|+++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999985444 478999999999999995 665544 48899999999999999988766543 46888999999997
Q ss_pred cCCcccccCCCCCCEEEccCCcCCCCCccccC---CCCCCCeEEeecCcCcc----cCCccCCCCCCccEEeCcCCcccc
Q 004232 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIF---SLPNISDLNLASNKFSG----SLPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 272 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~---~l~~L~~L~L~~N~l~g----~~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
...+..+..+++|+.|++++|.+++.++..+. ..+.++.++|++|.+++ .+|..+..+++|+.||+++|+++
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~- 290 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK- 290 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-
Confidence 54444566789999999999999998765543 35678999999999886 47788889999999999999999
Q ss_pred CCCCC-CCCCCCCceeecCCCcCCCC
Q 004232 345 GLPSC-LSNESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 345 ~~p~~-~~~~~~l~~l~l~~N~l~~~ 369 (766)
.+|.. +..+++|+.+++++|.+.+.
T Consensus 291 ~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 291 SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 56665 58999999999999998863
No 290
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.7e-29 Score=269.19 Aligned_cols=245 Identities=23% Similarity=0.249 Sum_probs=171.5
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccC-ccCCCccCC-------CCCCCCEEEccCCcCCCCCCcc
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFL-FGSVPPKIS-------TMVKLQTLILDDNFFNNTIPNW 185 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 185 (766)
++++++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45556666666666666 556555444 66666666666 344555554 5666666666666666666665
Q ss_pred c--CCCCCCCEEEccCccCCCCCCccccCC-----CCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCC----
Q 004232 186 F--DSLPSLTFLSMRNNKLAGPFPSSIQRI-----STLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNL---- 253 (766)
Q Consensus 186 ~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~---- 253 (766)
+ +.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..| .+..+++|++|++++|++.+.+
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 6666666777766666655 6655555 666677777666666554 3666666677777766655431
Q ss_pred ---CCCCCCCcEEEccCCcCcc--CC-cccccCCCCCCEEEccCCcCCCCCc-cccCCCCCCCeEEeecCcCcccCCccC
Q 004232 254 ---PKLPRGLVMAFLSNNSFSG--EI-PKQYGQLNQLQQLDMSFNALRGMPP-PAIFSLPNISDLNLASNKFSGSLPKNL 326 (766)
Q Consensus 254 ---p~~~~~l~~l~ls~N~l~~--~~-p~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~g~~p~~~ 326 (766)
+.-...|+.|++++|++++ .+ ...+..+++|+.|++++|++++.+| +.+..+++|+.|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 1223456667777777763 22 2445688999999999999999775 45667899999999999998 788877
Q ss_pred CCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 327 NCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 327 ~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
. .+|+.||+++|++++. |. +..+++|+.+++++|.+++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 6 7899999999999976 66 8889999999999999875
No 291
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=5.1e-28 Score=256.90 Aligned_cols=230 Identities=25% Similarity=0.239 Sum_probs=182.1
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCcc--CCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFG--SVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
++|++|+|++|.+....+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.+. .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 578999999999976555568899999999999998873 33677778899999999999887 467778889999999
Q ss_pred EccCccCCCCCC-ccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccC
Q 004232 196 SMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 196 ~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~ 273 (766)
++++|++++..+ ..+..+++|++|++++|.+++..+. +..+++|++|++++|.+++. .
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~ 166 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN--------------------F 166 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG--------------------E
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc--------------------c
Confidence 999999886655 5788888999999999988877665 67788888888877765430 3
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCC
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNE 353 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~ 353 (766)
+|..+..+++|+.|++++|++++.+|..+..+++|+.|+|++|++++..+..+..+.+|+.||+++|++++..|..+..+
T Consensus 167 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 246 (306)
T 2z66_A 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 246 (306)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCC
T ss_pred chhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhh
Confidence 56667777788888888888888777777778888888888888876666677777888888888888888777777777
Q ss_pred -CCCceeecCCCcCCC
Q 004232 354 -SDKRVVKFRGNCLSS 368 (766)
Q Consensus 354 -~~l~~l~l~~N~l~~ 368 (766)
++++.+++++|.+++
T Consensus 247 ~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 247 PSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTCCEEECTTCCEEC
T ss_pred hccCCEEEccCCCeec
Confidence 378888888887765
No 292
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=1.3e-27 Score=282.50 Aligned_cols=251 Identities=20% Similarity=0.200 Sum_probs=227.3
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 68999999999999988889999999999999999999999999999999999999999999776678999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC-----CCCCcEEEccCCcCc
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL-----PRGLVMAFLSNNSFS 271 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~-----~~~l~~l~ls~N~l~ 271 (766)
++|++++..|..|+++++|++|+|++|.+++..|. +..+++|++|++++|.+++..+.. ...|+.+++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999988888999999999999999999988775 789999999999999998876641 267999999999999
Q ss_pred cCCcccccCC---------------------------CCCCEEEccCCcCCCCCccccCCCCC--CCeEEeecCcCcccC
Q 004232 272 GEIPKQYGQL---------------------------NQLQQLDMSFNALRGMPPPAIFSLPN--ISDLNLASNKFSGSL 322 (766)
Q Consensus 272 ~~~p~~~~~l---------------------------~~L~~L~ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~g~~ 322 (766)
+..|..|+.+ ++|+.|++++|.+++.+|..+..++. |+.|+|++|++++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 9888877654 56788899999999999888888765 999999999999988
Q ss_pred CccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 323 PKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 323 p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
|..+..+++|+.|++++|++++..|..+..+++++.+++++|...+
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~ 310 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQ 310 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhc
Confidence 8999999999999999999999999999999999999998775543
No 293
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=6.3e-28 Score=277.63 Aligned_cols=293 Identities=24% Similarity=0.180 Sum_probs=209.4
Q ss_pred CEEEEEeCCCCCCCCC--CCCccc-cccccCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecc
Q 004232 74 FITELKIIGDKPSNVG--NFDGFA-SANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLS 150 (766)
Q Consensus 74 ~v~~l~l~~~~~~~~~--~~~~~~-~~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls 150 (766)
.++.++++++.+.+.. .|.++. .....++.|...+..|..|+++++|++|+|++|.+.+..|..|+++++|++|+|+
T Consensus 27 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 106 (549)
T 2z81_A 27 AMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLM 106 (549)
T ss_dssp TCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECT
T ss_pred CccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECC
Confidence 5788888777654321 222211 1123466676666666788999999999999999988877789999999999999
Q ss_pred cccCcc-CCCccCCCCCCCCEEEccCCcCCCCCC-cccCCCCCCCEEEccCccCCCCCCccccC----------------
Q 004232 151 SNFLFG-SVPPKISTMVKLQTLILDDNFFNNTIP-NWFDSLPSLTFLSMRNNKLAGPFPSSIQR---------------- 212 (766)
Q Consensus 151 ~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------------- 212 (766)
+|.+++ .+|..+.++++|++|++++|.+.+.+| ..|+++++|++|++++|++++.+|..+..
T Consensus 107 ~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 186 (549)
T 2z81_A 107 GNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF 186 (549)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT
T ss_pred CCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccc
Confidence 999876 357788889999999999888555554 57888888888888888888777766543
Q ss_pred --------CCCCCEEEccCCccCCCC------------------------------------------------------
Q 004232 213 --------ISTLSDLDLSKNAISGSL------------------------------------------------------ 230 (766)
Q Consensus 213 --------l~~L~~L~Ls~N~l~~~~------------------------------------------------------ 230 (766)
+++|++|++++|++++..
T Consensus 187 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~ 266 (549)
T 2z81_A 187 LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGL 266 (549)
T ss_dssp HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECC
T ss_pred cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccc
Confidence 556777777777766521
Q ss_pred -----------------------------------------------------------CC-C-CCCCCCCEEECCCCCC
Q 004232 231 -----------------------------------------------------------PD-L-SSLGSLNVLNLSDNKL 249 (766)
Q Consensus 231 -----------------------------------------------------------p~-~-~~l~~L~~L~ls~N~l 249 (766)
|. + ..+++|++|++++|++
T Consensus 267 ~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l 346 (549)
T 2z81_A 267 GDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLM 346 (549)
T ss_dssp SCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCC
T ss_pred ccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCccccEEEccCCcc
Confidence 00 0 2367888888988888
Q ss_pred CCCCC------CCCCCCcEEEccCCcCccCCc--ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCccc
Q 004232 250 DSNLP------KLPRGLVMAFLSNNSFSGEIP--KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (766)
Q Consensus 250 ~~~~p------~~~~~l~~l~ls~N~l~~~~p--~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (766)
++.+| .....|+.|++++|++++..+ ..++.+++|++|++++|+++++| ..+..+++|++|+|++|++++
T Consensus 347 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp-~~~~~~~~L~~L~Ls~N~l~~- 424 (549)
T 2z81_A 347 VEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMP-DSCQWPEKMRFLNLSSTGIRV- 424 (549)
T ss_dssp CHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCC-SCCCCCTTCCEEECTTSCCSC-
T ss_pred ccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCC-hhhcccccccEEECCCCCccc-
Confidence 77542 123567888888888876432 45777888888888888887544 456667777777777776652
Q ss_pred CCcc------------------CCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCCCc
Q 004232 322 LPKN------------------LNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSSNV 370 (766)
Q Consensus 322 ~p~~------------------~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~~~ 370 (766)
+|.. ...+++|+.|++++|+++ .+|. ...+++|+.|++++|.+++..
T Consensus 425 l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~ 489 (549)
T 2z81_A 425 VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVP 489 (549)
T ss_dssp CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCC
T ss_pred ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcC
Confidence 2221 125778999999999998 6776 467888999999999988643
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.5e-27 Score=253.30 Aligned_cols=226 Identities=20% Similarity=0.205 Sum_probs=189.8
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC--CCCcccCCCCCCCEEEcc
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN--TIPNWFDSLPSLTFLSMR 198 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~ 198 (766)
+.++.++++++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 45677777764 4555443 689999999999985545557899999999999999873 336677789999999999
Q ss_pred CccCCCCCCccccCCCCCCEEEccCCccCCCCC--CCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcc
Q 004232 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~ 276 (766)
+|.++ .+|..+..+++|++|++++|.+++..+ .+..+++|++|++++|.++ +..|.
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~---------------------~~~~~ 144 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR---------------------VAFNG 144 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCE---------------------ECSTT
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCC---------------------ccchh
Confidence 99988 477778899999999999999987664 4778888888887776554 45667
Q ss_pred cccCCCCCCEEEccCCcCCC-CCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCC
Q 004232 277 QYGQLNQLQQLDMSFNALRG-MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESD 355 (766)
Q Consensus 277 ~~~~l~~L~~L~ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~ 355 (766)
.|+.+++|++|++++|.+++ ..|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++..+..+..+++
T Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred hcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 78889999999999999987 57778999999999999999999988999999999999999999999887778889999
Q ss_pred CceeecCCCcCCCCcC
Q 004232 356 KRVVKFRGNCLSSNVQ 371 (766)
Q Consensus 356 l~~l~l~~N~l~~~~~ 371 (766)
|+.|++++|.+++..+
T Consensus 225 L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKK 240 (306)
T ss_dssp CCEEECTTSCCCBCSS
T ss_pred CCEeECCCCCCcccCH
Confidence 9999999999987544
No 295
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=3e-27 Score=259.94 Aligned_cols=247 Identities=19% Similarity=0.191 Sum_probs=203.4
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
.+.+|+.|++++|.+....+..|.++++|++|+|++|.+.+..|..|..+++|++|+|++|.+++..|..|+++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46889999999999977666668999999999999999998888899999999999999999999989999999999999
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCC---------------
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRG--------------- 259 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~--------------- 259 (766)
+|++|+++...+..|..+++|++|+|++|.+++..|. +..+++|++|++++|++++........
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~ 202 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 202 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccC
Confidence 9999999965555579999999999999999988775 889999999999999998653332333
Q ss_pred ----CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEE
Q 004232 260 ----LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFF 335 (766)
Q Consensus 260 ----l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L 335 (766)
++.+++++|.++.. |. ...++|+.|++++|++++. +.+..+++|+.|+|++|.+++..|..+..+++|+.|
T Consensus 203 ~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp CCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred CCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEE
Confidence 45555555555532 22 2246788888888888775 367788888888888888888778888888888888
Q ss_pred eCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 336 DISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 336 ~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
++++|++++ +|..+..+++|+.|++++|.++.
T Consensus 278 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 278 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp ECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC
T ss_pred ECCCCcCcc-cCcccCCCCCCCEEECCCCccee
Confidence 888888875 56666777888888888887763
No 296
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.8e-27 Score=250.08 Aligned_cols=234 Identities=23% Similarity=0.228 Sum_probs=192.6
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCc-CCCCCCcccCCCCCCCEE
Q 004232 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF-FNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 117 l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 195 (766)
.++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. +....|..|.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3589999999999999888899999999999999999998889999999999999999997 777778899999999999
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCc
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFS 271 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~ 271 (766)
++++|++++..|..+..+++|++|+|++|.+++..+. +..+++|++|++++|++++..+.. ...|+.+++++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 9999999988889999999999999999999987765 788999999999999988655542 356778888888888
Q ss_pred cCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCC
Q 004232 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (766)
Q Consensus 272 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~ 351 (766)
+..|..|+.+++|+.|++++|++++.++..+..+++|+.|+|++|.+....+.. .....++.++.+.|.+.+..|..+.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 777888888888888888888888877777778888888888888877543321 1112244455666777777776543
No 297
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.7e-27 Score=263.63 Aligned_cols=220 Identities=24% Similarity=0.262 Sum_probs=199.6
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.+++|.+.+..+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|.++
T Consensus 81 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 160 (452)
T 3zyi_A 81 NLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIE 160 (452)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCC
T ss_pred ECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcc
Confidence 56777766666788999999999999999999999999999999999999999999877778999999999999999999
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCC-ccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL-- 256 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~-- 256 (766)
...+..|.++++|++|+|++|+..+.+| ..|..+++|++|+|++|++++ +|.+..+++|++|+|++|.+++..|..
T Consensus 161 ~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 239 (452)
T 3zyi_A 161 SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIRPGSFH 239 (452)
T ss_dssp EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEECGGGGT
T ss_pred eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccCccccc
Confidence 8888899999999999999955444444 568999999999999999986 578999999999999999999876653
Q ss_pred -CCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcc
Q 004232 257 -PRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSG 320 (766)
Q Consensus 257 -~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g 320 (766)
..+|+.|++++|++++..|..|..+++|+.|+|++|++++.++..+..+++|+.|+|++|.+..
T Consensus 240 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 240 GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 3579999999999999999999999999999999999999999999999999999999999874
No 298
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.9e-29 Score=265.54 Aligned_cols=228 Identities=23% Similarity=0.322 Sum_probs=196.2
Q ss_pred cccccccCCCCCCEEecccccc-cccCCcccc-------CCCCCCEEecccccCccCCCccC--CCCCCCCEEEccCCcC
Q 004232 109 SFVTTLARLTSLRVLSLVSLGI-WGSLPDKIH-------RLYSLEYLDLSSNFLFGSVPPKI--STMVKLQTLILDDNFF 178 (766)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l-~~~~p~~~~-------~L~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l 178 (766)
.+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|++
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 456656554 89999999999 567888776 89999999999999999999887 8999999999999999
Q ss_pred CCCCCcccCCC-----CCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCC---CCC--CCCCCCCEEECCCCC
Q 004232 179 NNTIPNWFDSL-----PSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSL---PDL--SSLGSLNVLNLSDNK 248 (766)
Q Consensus 179 ~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---p~~--~~l~~L~~L~ls~N~ 248 (766)
++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+.+ +.+ ..+++|++|++++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 987 8888877 99999999999999988899999999999999999987752 233 889999999999999
Q ss_pred CCCC--CC-C---CCCCCcEEEccCCcCccCCc-ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCccc
Q 004232 249 LDSN--LP-K---LPRGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (766)
Q Consensus 249 l~~~--~p-~---~~~~l~~l~ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (766)
+++. ++ . ....|+.|++++|++++..| ..+..+++|++|+|++|+++.++ ..+. ++|+.|+|++|++++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip-~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVP-KGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCC-SSCC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhh-hhcc--CCceEEECCCCCCCCC
Confidence 9842 12 1 23689999999999999875 56777899999999999999554 4555 8999999999999976
Q ss_pred CCccCCCCCCccEEeCcCCcccc
Q 004232 322 LPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 322 ~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
|. +..+++|+.|++++|++++
T Consensus 290 -p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 290 -PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -CC-TTTSCEEEEEECTTCTTTC
T ss_pred -hh-HhhCCCCCEEeccCCCCCC
Confidence 66 8899999999999999985
No 299
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.95 E-value=3.7e-26 Score=255.95 Aligned_cols=215 Identities=23% Similarity=0.182 Sum_probs=116.8
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (766)
++++++|++|+|++|.+++. | ++++++|++|+|++|++++ +| ++.+++|++|++++|++++. | ++++++|+
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~ 151 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLT 151 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCC
T ss_pred cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCC
Confidence 55666666666666666553 2 5666666666666666654 33 56666666666666666652 2 55566666
Q ss_pred EEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccC
Q 004232 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 194 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~ 273 (766)
+|++++|+..+.+ .+..+++|+.|++++|++++. | +..+++|+.|++++|++++..-.-...|+.+++++|++++
T Consensus 152 ~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~-l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~- 226 (457)
T 3bz5_A 152 ELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D-VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE- 226 (457)
T ss_dssp EEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-
T ss_pred EEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-cccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-
Confidence 6666666444444 255566666666666666552 3 5556666666666666655421223455666666666665
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCC-------CCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCC
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLP-------NISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGL 346 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~-------~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~ 346 (766)
+| ++.+++|+.|++++|++++.++..+.++. +|+.|++++|.+.|.+| +..+++|+.|++++|.+.+.+
T Consensus 227 ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l 302 (457)
T 3bz5_A 227 ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLL 302 (457)
T ss_dssp CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEE
T ss_pred cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCccccee
Confidence 44 55666666666666666665544433332 33444444444444443 223344444444444443333
No 300
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=1.2e-26 Score=271.33 Aligned_cols=134 Identities=28% Similarity=0.276 Sum_probs=122.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
+++++|+|++|.|++..|.+|.++++|++|||++|+|++..|..|.+|++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999988899999999999999999999888889999999999999999999888889999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCC-CCC-CCCCCCCCEEECCCCCCCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGS-LPD-LSSLGSLNVLNLSDNKLDS 251 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~-~~~l~~L~~L~ls~N~l~~ 251 (766)
++|++++..+..|+++++|++|+|++|.+++. +|. +..+++|++|++++|++++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc
Confidence 99999988778899999999999999999864 444 6789999999999987743
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.3e-26 Score=259.19 Aligned_cols=220 Identities=22% Similarity=0.256 Sum_probs=199.0
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.++.|.+....+..|.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|.++
T Consensus 70 ~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~ 149 (440)
T 3zyj_A 70 NLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE 149 (440)
T ss_dssp ECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCC
T ss_pred EccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCccc
Confidence 46666666666678999999999999999999998899999999999999999999777778999999999999999999
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCC-ccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC-
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLP- 257 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~- 257 (766)
...+..|.++++|++|+|++|+..+.+| ..|.++++|++|+|++|+++ .+|.+..+++|++|+|++|++++..|...
T Consensus 150 ~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 150 SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTTT
T ss_pred ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhhc
Confidence 8888899999999999999955444444 57899999999999999998 56789999999999999999998777543
Q ss_pred --CCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcc
Q 004232 258 --RGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSG 320 (766)
Q Consensus 258 --~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g 320 (766)
.+|+.|+|++|++++..|..|..+++|+.|+|++|++++.++..|..+++|+.|+|++|.+..
T Consensus 229 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred cCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 578999999999999999999999999999999999999999999999999999999999863
No 302
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=2.9e-26 Score=247.85 Aligned_cols=242 Identities=23% Similarity=0.300 Sum_probs=178.7
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (766)
+.++++|++|+|++|.+.. + +.|.++++|++|+|++|.+.+ +|. +..+++|++|++++|.....++. +..+++|+
T Consensus 84 ~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~ 158 (347)
T 4fmz_A 84 LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLN 158 (347)
T ss_dssp GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCC
T ss_pred hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCcccccc-hhhCCCCc
Confidence 7788888888888888765 3 358888888888888888864 343 77888888888888866554443 77888888
Q ss_pred EEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCcEEEccCCcCcc
Q 004232 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLP-KLPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 194 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~l~ls~N~l~~ 272 (766)
+|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ .....|+.+++++|++++
T Consensus 159 ~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~ 235 (347)
T 4fmz_A 159 YLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITD 235 (347)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred EEEecCCCcCCchh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCchhhcCCcCCEEEccCCccCC
Confidence 88888888775433 7778888888888888775443 7777788888888887766543 123567778888888776
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCC
Q 004232 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSN 352 (766)
Q Consensus 273 ~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~ 352 (766)
..+ +..+++|+.|++++|.+++. +.+..+++|+.|++++|++++. +.+..+++|+.|++++|++++..|..+..
T Consensus 236 ~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 309 (347)
T 4fmz_A 236 LSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGG 309 (347)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHT
T ss_pred Ccc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhc
Confidence 444 77778888888888887775 3577778888888888877753 34667777888888888887777777777
Q ss_pred CCCCceeecCCCcCCCC
Q 004232 353 ESDKRVVKFRGNCLSSN 369 (766)
Q Consensus 353 ~~~l~~l~l~~N~l~~~ 369 (766)
+++|+.+++++|.+++.
T Consensus 310 l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 310 LTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CTTCSEEECCSSSCCCC
T ss_pred cccCCEEEccCCccccc
Confidence 77788888888877653
No 303
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=2.4e-26 Score=248.51 Aligned_cols=279 Identities=20% Similarity=0.273 Sum_probs=230.2
Q ss_pred CCEEEEEeCCCCCCCCCCCCcccc-ccccCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEeccc
Q 004232 73 NFITELKIIGDKPSNVGNFDGFAS-ANASLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSS 151 (766)
Q Consensus 73 ~~v~~l~l~~~~~~~~~~~~~~~~-~~~~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~ 151 (766)
..++.+++.+..+.....+.++.. ....++.|... .+ +.+.++++|++|+|++|.+.+.. . +..+++|++|++++
T Consensus 66 ~~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n~i~-~~-~~~~~l~~L~~L~l~~n~i~~~~-~-~~~l~~L~~L~l~~ 141 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKIT-DI-SALQNLTNLRELYLNEDNISDIS-P-LANLTKMYSLNLGA 141 (347)
T ss_dssp TTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC-CC-GGGTTCTTCSEEECTTSCCCCCG-G-GTTCTTCCEEECTT
T ss_pred CCccEEEccCCccccchhhhcCCcCCEEEccCCccc-Cc-hHHcCCCcCCEEECcCCcccCch-h-hccCCceeEEECCC
Confidence 357788887776554333322111 12245555433 34 36999999999999999997653 3 99999999999999
Q ss_pred ccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC
Q 004232 152 NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP 231 (766)
Q Consensus 152 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 231 (766)
|...+.++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|++++.. . +..+++|+.|++++|.+++..+
T Consensus 142 n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~l~~n~l~~~~~ 216 (347)
T 4fmz_A 142 NHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDIS-P-LASLTSLHYFTAYVNQITDITP 216 (347)
T ss_dssp CTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCG-G-GGGCTTCCEEECCSSCCCCCGG
T ss_pred CCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccc-c-ccCCCccceeecccCCCCCCch
Confidence 97765555 49999999999999999986544 889999999999999998643 3 8899999999999999997665
Q ss_pred CCCCCCCCCEEECCCCCCCCCCC-CCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCe
Q 004232 232 DLSSLGSLNVLNLSDNKLDSNLP-KLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISD 310 (766)
Q Consensus 232 ~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 310 (766)
+..+++|++|++++|.+++..+ ....+|+.+++++|.+++. ..+..+++|+.|++++|++++. +.+..+++|+.
T Consensus 217 -~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~ 291 (347)
T 4fmz_A 217 -VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNS 291 (347)
T ss_dssp -GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred -hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCE
Confidence 8899999999999999987654 2246799999999999874 4689999999999999999997 35889999999
Q ss_pred EEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 311 LNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 311 L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
|+|++|++++..|..+..+++|+.|++++|++++..| +..+++|+.+++++|.++
T Consensus 292 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 292 LFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 9999999999989999999999999999999998777 788999999999999875
No 304
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=9.3e-26 Score=252.51 Aligned_cols=221 Identities=29% Similarity=0.423 Sum_probs=114.1
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
.++++++|++|++++|.+.+ +|..+ .+|++|+|++|++++ +| .+.++++|++|++++|++++ +|... ++|
T Consensus 148 ~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L 217 (454)
T 1jl5_A 148 ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSL 217 (454)
T ss_dssp CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTC
T ss_pred ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---Ccc
Confidence 35555555555555555543 34322 355555555555554 33 35555555555555555554 33221 355
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCcc
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~ 272 (766)
++|++++|+++ .+|. ++.+++|++|++++|++++. |. .+++|++|++++|++++ +|..+..++.+++++|++++
T Consensus 218 ~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l-~~--~~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 218 ESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKTL-PD--LPPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSG 291 (454)
T ss_dssp CEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSSC-CS--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSE
T ss_pred cEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCcc-cc--cccccCEEECCCCcccc-cCcccCcCCEEECcCCccCc
Confidence 55555555555 4442 55556666666666665542 22 12455555555555554 34444555555555555554
Q ss_pred --CCcccccCCCCCCEEEccCCcCCCCCccccCCC-CCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCC
Q 004232 273 --EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSL-PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSC 349 (766)
Q Consensus 273 --~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~ 349 (766)
.+| ++|+.|++++|++++.+ .+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|.
T Consensus 292 l~~~~------~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~- 354 (454)
T 1jl5_A 292 LSELP------PNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE- 354 (454)
T ss_dssp ESCCC------TTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC-
T ss_pred ccCcC------CcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc-
Confidence 122 23444444444443321 12 356666666666664 4443 355666666666666 3444
Q ss_pred CCCCCCCceeecCCCcCCC
Q 004232 350 LSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 350 ~~~~~~l~~l~l~~N~l~~ 368 (766)
.+++++.+++++|.+++
T Consensus 355 --~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 355 --LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp --CCTTCCEEECCSSCCSS
T ss_pred --hhhhccEEECCCCCCCc
Confidence 24556666666666655
No 305
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=7.4e-26 Score=253.52 Aligned_cols=238 Identities=21% Similarity=0.176 Sum_probs=194.9
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
.++.+++|++|+|++|.+++. | ++.+++|++|+|++|.+++. | ++++++|++|+|++|++++ +| ++.+++|
T Consensus 59 ~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L 129 (457)
T 3bz5_A 59 GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLL 129 (457)
T ss_dssp TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTC
T ss_pred hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcC
Confidence 578889999999999998874 4 88999999999999999864 4 8899999999999999987 44 8899999
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCcc
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~ 272 (766)
++|++++|++++. | ++.+++|++|++++|...+.+ .+..+++|++|++++|++++....-...|+.+++++|++++
T Consensus 130 ~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 130 TYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp CEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSC
T ss_pred CEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCe
Confidence 9999999999874 3 788899999999999776666 57888999999999999988432334678899999999987
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCC-------CccEEeCcCCccccC
Q 004232 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGG-------KLVFFDISNNKLTGG 345 (766)
Q Consensus 273 ~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~-------~L~~L~ls~N~l~g~ 345 (766)
. .++.+++|+.|++++|++++++ +..+++|+.|++++|++++..+..+..+. +|+.|++++|.+.|.
T Consensus 206 ~---~l~~l~~L~~L~Ls~N~l~~ip---~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~ 279 (457)
T 3bz5_A 206 L---DLNQNIQLTFLDCSSNKLTEID---VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIY 279 (457)
T ss_dssp C---CCTTCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCE
T ss_pred e---ccccCCCCCEEECcCCcccccC---ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCc
Confidence 5 3888999999999999999854 77889999999999999986655555544 566777788877777
Q ss_pred CCCCCCCCCCCceeecCCCcCCCCcC
Q 004232 346 LPSCLSNESDKRVVKFRGNCLSSNVQ 371 (766)
Q Consensus 346 ~p~~~~~~~~l~~l~l~~N~l~~~~~ 371 (766)
+| ++.+++|+.+++++|.+.+..+
T Consensus 280 ~~--~~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 280 FQ--AEGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp EE--CTTCTTCCCCCCTTCTTCCEEE
T ss_pred cc--ccccccCCEEECCCCcccceec
Confidence 77 4577888999999888766544
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.5e-26 Score=241.31 Aligned_cols=224 Identities=20% Similarity=0.237 Sum_probs=185.3
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCc
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (766)
+.++.+++++. .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 46777777775 456543 578999999999999877788999999999999999999888999999999999999999
Q ss_pred c-CCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccc
Q 004232 201 K-LAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (766)
Q Consensus 201 ~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~ 278 (766)
+ ++...|..+..+++|++|+|++|.+++..|. +..+++|++|++++|++++ ..+..|
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---------------------~~~~~~ 149 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA---------------------LPDDTF 149 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc---------------------cCHhHh
Confidence 7 7777688899999999999999999987665 7888999999988887764 334456
Q ss_pred cCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCce
Q 004232 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRV 358 (766)
Q Consensus 279 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~ 358 (766)
+.+++|+.|++++|++++.++..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 229 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQY 229 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCE
T ss_pred ccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCE
Confidence 77788888888888888877777888888888888888888777888888888888888888888766666777888888
Q ss_pred eecCCCcCCC
Q 004232 359 VKFRGNCLSS 368 (766)
Q Consensus 359 l~l~~N~l~~ 368 (766)
+++++|.+.+
T Consensus 230 L~l~~N~~~c 239 (285)
T 1ozn_A 230 LRLNDNPWVC 239 (285)
T ss_dssp EECCSSCEEC
T ss_pred EeccCCCccC
Confidence 8888887764
No 307
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=8.5e-26 Score=254.43 Aligned_cols=236 Identities=27% Similarity=0.367 Sum_probs=112.5
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (766)
++++++|++|+|++|.+.+..| +.++++|++|+|++|.+.+ +| .+..+++|++|+++ |.+.+.. .+.++++|+
T Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~ 180 (466)
T 1o6v_A 108 LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLE 180 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCC
T ss_pred hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCC
Confidence 4455555555555554443322 4455555555555554442 22 13333333333332 1122111 144555555
Q ss_pred EEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcCc
Q 004232 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFS 271 (766)
Q Consensus 194 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~ 271 (766)
+|++++|++++. ..+..+++|++|++++|.+++..| ++.+++|++|++++|.+++. +.+ ...|+.+++++|.++
T Consensus 181 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 181 RLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCC
T ss_pred EEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccc
Confidence 555555555432 234555555555555555554433 44455555555555555432 111 234555555555555
Q ss_pred cCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCC
Q 004232 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (766)
Q Consensus 272 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~ 351 (766)
+..| +..+++|+.|++++|.+++.++ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++..| +.
T Consensus 257 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~ 328 (466)
T 1o6v_A 257 NLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VS 328 (466)
T ss_dssp CCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GG
T ss_pred cchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hc
Confidence 4333 5555555555555555555443 4455555555555555554322 4445555555555555554443 34
Q ss_pred CCCCCceeecCCCcCCC
Q 004232 352 NESDKRVVKFRGNCLSS 368 (766)
Q Consensus 352 ~~~~l~~l~l~~N~l~~ 368 (766)
.+++|+.|++++|.+++
T Consensus 329 ~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 329 SLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp GCTTCCEEECCSSCCCC
T ss_pred cCccCCEeECCCCccCC
Confidence 45555555555555443
No 308
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.94 E-value=9.8e-26 Score=253.91 Aligned_cols=248 Identities=26% Similarity=0.301 Sum_probs=147.7
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
++.|... .++. +.++++|++|+|++|.+.+. | .+.++++|++|+++ |.+.+. + .+.++++|++|++++|.+++
T Consensus 119 L~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~-~-~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQIT-DIDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDL-K-PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCC-CCGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCC-G-GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCC-CChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCc-h-hhccCCCCCEEECcCCcCCC
Confidence 4444333 3343 89999999999999998763 3 36677777766665 344332 2 26666666666666666654
Q ss_pred CCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCC-CCCC
Q 004232 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPK-LPRG 259 (766)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~-~~~~ 259 (766)
. ..+..+++|++|++++|++++..| ++.+++|+.|++++|.+++ ++.+..+++|++|++++|.+++..+- -...
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~ 266 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLAPLSGLTK 266 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCGGGTTCTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-chhhhcCCCCCEEECCCCccccchhhhcCCC
Confidence 3 235666666666666666665443 5556666666666666654 34455566666666666666554331 1244
Q ss_pred CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcC
Q 004232 260 LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (766)
Q Consensus 260 l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~ 339 (766)
|+.+++++|.+++..| +..+++|+.|++++|++++.++ +..+++|+.|+|++|++++..| +..+++|+.|++++
T Consensus 267 L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 267 LTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp CSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 5666666666665333 5556666666666666665544 4556666666666666655444 44555666666666
Q ss_pred CccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 340 NKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 340 N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
|++++. ..+..+++|+.+++++|.+++
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCB
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCc
Confidence 666543 245555566666666665554
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.5e-27 Score=269.70 Aligned_cols=232 Identities=24% Similarity=0.247 Sum_probs=169.9
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
.+++|+.|+|++|.+.+..|..|+++++|++|+|++|.+++.+| |..+++|++|+|++|.+++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999998888899999999999999999987665 8999999999999998885432 3889999
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCCC----CCCCcEEEccCCcC
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKL----PRGLVMAFLSNNSF 270 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~----~~~l~~l~ls~N~l 270 (766)
++++|.+++..+. .+++|+.|+|++|.+++.+| .++.+++|++|+|++|.+++.+|.. ...|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999876554 35788999999999988766 4778888888888888887654431 24566667777766
Q ss_pred ccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccc-cCCCCC
Q 004232 271 SGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT-GGLPSC 349 (766)
Q Consensus 271 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~-g~~p~~ 349 (766)
++..+ +..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.++ +.+|.+
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 65422 23466677777777777665553 6666667777777777664 5656666666677777776666 455555
Q ss_pred CCCCCCCceeec
Q 004232 350 LSNESDKRVVKF 361 (766)
Q Consensus 350 ~~~~~~l~~l~l 361 (766)
+..++.++.+++
T Consensus 258 ~~~l~~L~~l~~ 269 (487)
T 3oja_A 258 FSKNQRVQTVAK 269 (487)
T ss_dssp HTTCHHHHHHHH
T ss_pred HHhCCCCcEEec
Confidence 555555555544
No 310
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.93 E-value=1.1e-25 Score=251.97 Aligned_cols=241 Identities=22% Similarity=0.262 Sum_probs=195.4
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCC-------------CEEecccccCccCCCccCCCCCC
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSL-------------EYLDLSSNFLFGSVPPKISTMVK 167 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L-------------~~L~Ls~N~l~~~~p~~~~~l~~ 167 (766)
++.|.. +.+|+++++|++|++|++++|.+.|.+|..++++.+| ++|++++|.+++ +|.. .++
T Consensus 18 l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~ 92 (454)
T 1jl5_A 18 RHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPH 92 (454)
T ss_dssp -----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTT
T ss_pred cccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCC
Confidence 344444 7789999999999999999999999999999999875 999999999986 5542 378
Q ss_pred CCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCC
Q 004232 168 LQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDN 247 (766)
Q Consensus 168 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N 247 (766)
|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++ +|.++.+++|++|++++|
T Consensus 93 L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LPELQNSSFLKIIDVDNN 163 (454)
T ss_dssp CSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CCCCTTCTTCCEEECCSS
T ss_pred CCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-CcccCCCCCCCEEECCCC
Confidence 9999999999997 7754 4899999999999986 3432 2789999999999997 678999999999999999
Q ss_pred CCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCC
Q 004232 248 KLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLN 327 (766)
Q Consensus 248 ~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~ 327 (766)
++++ +|..+.+|+.+++++|++++ +| .++.+++|+.|++++|++++.+. . .++|+.|++++|.++ .+|. +.
T Consensus 164 ~l~~-lp~~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-~---~~~L~~L~l~~n~l~-~lp~-~~ 234 (454)
T 1jl5_A 164 SLKK-LPDLPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-L---PLSLESIVAGNNILE-ELPE-LQ 234 (454)
T ss_dssp CCSC-CCCCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-C---CTTCCEEECCSSCCS-SCCC-CT
T ss_pred cCcc-cCCCcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-C---cCcccEEECcCCcCC-cccc-cC
Confidence 9987 67777899999999999997 66 69999999999999999998654 2 258999999999998 7784 88
Q ss_pred CCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 328 CGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 328 ~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
.+++|+.|++++|++++ +|.. .++++.+++++|.+++
T Consensus 235 ~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 235 NLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD 271 (454)
T ss_dssp TCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC
T ss_pred CCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc
Confidence 89999999999999985 5553 3678999999998886
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=8.8e-28 Score=256.44 Aligned_cols=238 Identities=23% Similarity=0.248 Sum_probs=182.4
Q ss_pred ccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCC
Q 004232 112 TTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (766)
Q Consensus 112 ~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (766)
..+..+++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++.. ..++
T Consensus 28 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~ 100 (317)
T 3o53_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPS 100 (317)
T ss_dssp HHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTT
T ss_pred HHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCC
Confidence 445667789999999999988888889999999999999999886554 888999999999999887533 3488
Q ss_pred CCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCC-C---CCCCcEEEcc
Q 004232 192 LTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPK-L---PRGLVMAFLS 266 (766)
Q Consensus 192 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~-~---~~~l~~l~ls 266 (766)
|++|++++|++++..+.. +++|++|++++|.+++..+ .+..+++|++|++++|.+++..+. + ...|+.|+++
T Consensus 101 L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 177 (317)
T 3o53_A 101 IETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (317)
T ss_dssp CCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred cCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECC
Confidence 999999999988655443 5778999999999988766 477788899999998888765443 1 2567778888
Q ss_pred CCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccc-cC
Q 004232 267 NNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT-GG 345 (766)
Q Consensus 267 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~-g~ 345 (766)
+|.+++. | ....+++|+.|++++|++++.++. +..+++|+.|+|++|+++ .+|..+..+++|+.|++++|.++ +.
T Consensus 178 ~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 178 YNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp TSCCCEE-E-CCCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred CCcCccc-c-cccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcC
Confidence 8887754 2 223477788888888888776654 777788888888888877 46777777778888888888877 66
Q ss_pred CCCCCCCCCCCceeecCC
Q 004232 346 LPSCLSNESDKRVVKFRG 363 (766)
Q Consensus 346 ~p~~~~~~~~l~~l~l~~ 363 (766)
+|..+..++.++.+++.+
T Consensus 254 ~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 254 LRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp HHHHHHTCHHHHHHHHHH
T ss_pred HHHHHhccccceEEECCC
Confidence 666666677777777663
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=2.5e-25 Score=256.87 Aligned_cols=285 Identities=27% Similarity=0.306 Sum_probs=209.2
Q ss_pred CCCccCCCCCCCCCCCC---CccceEecCCCEEEEEeCCCCCCCCCCCCccccccccCCCcccCCcccccccCCCCCCEE
Q 004232 47 LEIWINHGADFCYISSS---TQVNITCQDNFITELKIIGDKPSNVGNFDGFASANASLSENFSIDSFVTTLARLTSLRVL 123 (766)
Q Consensus 47 l~~W~~~~~~~C~~~~~---~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~l~~l~~L~~L 123 (766)
.++|... .+||.|.+. -.....|....++.+++.++.+......-........+++|.+ ..+|. .+++|++|
T Consensus 12 w~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~~~L~~L~L~~N~l-~~lp~---~l~~L~~L 86 (622)
T 3g06_A 12 WSAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNL-TSLPA---LPPELRTL 86 (622)
T ss_dssp HHHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCCTTCSEEEECSCCC-SCCCC---CCTTCCEE
T ss_pred HHHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcCccChhhCCCCcEEEecCCCC-CCCCC---cCCCCCEE
Confidence 4568654 578877320 0011234344577888877665432210001111223444543 34555 57888888
Q ss_pred ecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCC
Q 004232 124 SLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLA 203 (766)
Q Consensus 124 ~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 203 (766)
+|++|.+++ +|. .+++|++|+|++|++++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|+++
T Consensus 87 ~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 87 EVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA 154 (622)
T ss_dssp EECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred EcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC
Confidence 888888864 555 67888888888888875 454 56788888888888875 5543 488889999999888
Q ss_pred CCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCC
Q 004232 204 GPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQ 283 (766)
Q Consensus 204 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~ 283 (766)
+ +|. .+++|+.|++++|.+++ +| ..+++|+.|++++|.+++ +|..+.+|..|++++|.++. +|. .+++
T Consensus 155 ~-l~~---~~~~L~~L~L~~N~l~~-l~--~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l~~---~~~~ 222 (622)
T 3g06_A 155 S-LPA---LPSELCKLWAYNNQLTS-LP--MLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-LPA---LPSG 222 (622)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CCC---CCTT
T ss_pred C-cCC---ccCCCCEEECCCCCCCC-Cc--ccCCCCcEEECCCCCCCC-CCCccchhhEEECcCCcccc-cCC---CCCC
Confidence 5 454 34678888999998886 44 556889999999999986 66667889999999999984 554 3578
Q ss_pred CCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCC
Q 004232 284 LQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (766)
Q Consensus 284 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (766)
|+.|++++|++++++ ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++++|+.|++++
T Consensus 223 L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 223 LKELIVSGNRLTSLP----VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp CCEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCS
T ss_pred CCEEEccCCccCcCC----CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecC
Confidence 999999999999866 45689999999999998 5676 5678999999999999 7888899999999999999
Q ss_pred CcCCCC
Q 004232 364 NCLSSN 369 (766)
Q Consensus 364 N~l~~~ 369 (766)
|.+++.
T Consensus 294 N~l~~~ 299 (622)
T 3g06_A 294 NPLSER 299 (622)
T ss_dssp CCCCHH
T ss_pred CCCCCc
Confidence 998853
No 313
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.9e-26 Score=250.05 Aligned_cols=247 Identities=19% Similarity=0.180 Sum_probs=208.2
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.+++|...+..+..+.++++|++|+|++|.+.+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 58 ~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 137 (353)
T 2z80_A 58 DLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK 137 (353)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS
T ss_pred ECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc
Confidence 45555544444458999999999999999999999999999999999999999998765556999999999999999999
Q ss_pred CCCC-cccCCCCCCCEEEccCc-cCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCC-
Q 004232 180 NTIP-NWFDSLPSLTFLSMRNN-KLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPK- 255 (766)
Q Consensus 180 ~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~- 255 (766)
...+ ..|.++++|++|++++| .+++..|..+..+++|++|++++|.+++..| .+..+++|++|++++|.++...+.
T Consensus 138 ~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 217 (353)
T 2z80_A 138 TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF 217 (353)
T ss_dssp SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH
T ss_pred ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh
Confidence 6544 48999999999999999 4776677889999999999999999998766 488999999999999998643322
Q ss_pred --CCCCCcEEEccCCcCccCCccccc---CCCCCCEEEccCCcCCCC----CccccCCCCCCCeEEeecCcCcccCCcc-
Q 004232 256 --LPRGLVMAFLSNNSFSGEIPKQYG---QLNQLQQLDMSFNALRGM----PPPAIFSLPNISDLNLASNKFSGSLPKN- 325 (766)
Q Consensus 256 --~~~~l~~l~ls~N~l~~~~p~~~~---~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~g~~p~~- 325 (766)
...+|+.+++++|++++..+..+. ....++.+++++|.+++. +|..+..+++|+.|+|++|+++ .+|..
T Consensus 218 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~ 296 (353)
T 2z80_A 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGI 296 (353)
T ss_dssp HHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTT
T ss_pred hhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHH
Confidence 246899999999999987665443 467789999999998873 5667889999999999999999 56665
Q ss_pred CCCCCCccEEeCcCCccccCCC
Q 004232 326 LNCGGKLVFFDISNNKLTGGLP 347 (766)
Q Consensus 326 ~~~~~~L~~L~ls~N~l~g~~p 347 (766)
+..+++|+.|++++|.+++..|
T Consensus 297 ~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 297 FDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTTCTTCCEEECCSSCBCCCHH
T ss_pred HhcCCCCCEEEeeCCCccCcCC
Confidence 5889999999999999997654
No 314
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=8.1e-25 Score=227.88 Aligned_cols=181 Identities=26% Similarity=0.310 Sum_probs=111.5
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|+.|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 45677777777776666566777777777777777776544445566777777777777766655566666666777777
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcc
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~ 276 (766)
++|++++..|..|..+++|++|+|++|.+++..+. +..+++|++|++++|++++ ..+.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~ 175 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR---------------------VPEG 175 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------CCTT
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE---------------------eChh
Confidence 76666665555666666666666666666654443 4555555555555544432 2233
Q ss_pred cccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 277 QYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 277 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
.|..+++|+.|++++|++++.++..+..+++|+.|+|++|.+.
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 4555556666666666666555555555555666666655554
No 315
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.5e-25 Score=232.44 Aligned_cols=205 Identities=25% Similarity=0.226 Sum_probs=143.0
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46888888888888877778888888888888888888777778888888888888888888777788888888888888
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCC-CC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCc
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGS-LP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP 275 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p 275 (766)
++|++++..+..+..+++|++|+|++|.+++. +| .+..+++|++|++++|++++ ..+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~---------------------~~~ 166 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS---------------------IYC 166 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE---------------------ECG
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc---------------------CCH
Confidence 88888876666777788888888888877652 23 36666667666666665543 223
Q ss_pred ccccCCCCCC----EEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCcccc
Q 004232 276 KQYGQLNQLQ----QLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 276 ~~~~~l~~L~----~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
..|..+.+|+ .|++++|.+++.++..+. ..+|+.|+|++|++++..+..+..+++|+.|++++|.+++
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 3333333333 566666666665554333 3356666666666665444445556666666666666654
No 316
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1e-24 Score=227.89 Aligned_cols=214 Identities=20% Similarity=0.246 Sum_probs=186.6
Q ss_pred cCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccC
Q 004232 133 SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQR 212 (766)
Q Consensus 133 ~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 212 (766)
.+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 3555443 57999999999999877779999999999999999999888889999999999999999999888889999
Q ss_pred CCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccC
Q 004232 213 ISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSF 291 (766)
Q Consensus 213 l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~ 291 (766)
+++|++|++++|.+++..+ .+..+++|++|++++|.+++. .+|..|+.+++|+.|++++
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--------------------~l~~~~~~l~~L~~L~Ls~ 158 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--------------------KLPEYFSNLTNLEHLDLSS 158 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--------------------CCCGGGGGCTTCCEEECCS
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--------------------cCchhhccCCCCCEEECCC
Confidence 9999999999999998766 488889999998888876531 3578899999999999999
Q ss_pred CcCCCCCccccCCCCCCC----eEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 292 NALRGMPPPAIFSLPNIS----DLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 292 N~l~~~~~~~~~~l~~L~----~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
|++++.++..+..+++|+ .|++++|.+++..+..+. ..+|+.|++++|++++..+..+..+++|+.+++++|.+.
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 999999988888888877 899999999966555554 458999999999999877777899999999999999998
Q ss_pred CC
Q 004232 368 SN 369 (766)
Q Consensus 368 ~~ 369 (766)
+.
T Consensus 238 c~ 239 (276)
T 2z62_A 238 CS 239 (276)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 317
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=4e-25 Score=230.43 Aligned_cols=210 Identities=23% Similarity=0.309 Sum_probs=162.1
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
.+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|.+.+ + +.+..+++|++|+|++|.+++..|..|+++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 35567778888888877753 33 47778888888888888765 2 367778888888888888877777777778888
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCc
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFS 271 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~ 271 (766)
++|+|++|++++..|..|..+++|++|+|++|.+++.++. +..+++|++|++++|+++
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--------------------- 170 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ--------------------- 170 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC---------------------
Confidence 8888888888776666677778888888888877766654 567777777777666554
Q ss_pred cCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCC
Q 004232 272 GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (766)
Q Consensus 272 ~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~ 351 (766)
+..+..|+.+++|+.|++++|++++.++..+..+++|+.|+|++|.+.+..| .|+.++++.|+++|.+|.+++
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------TTHHHHHHHHHTGGGBBCTTS
T ss_pred ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------HHHHHHHHHHhCCCcccCccc
Confidence 3455667888999999999999999998888999999999999998886544 688889999999999999887
Q ss_pred CCC
Q 004232 352 NES 354 (766)
Q Consensus 352 ~~~ 354 (766)
.+.
T Consensus 244 ~~~ 246 (272)
T 3rfs_A 244 SVA 246 (272)
T ss_dssp CBC
T ss_pred ccC
Confidence 654
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=5e-26 Score=242.86 Aligned_cols=236 Identities=19% Similarity=0.232 Sum_probs=205.7
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcc
Q 004232 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMR 198 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 198 (766)
.++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46667888888877666777888899999999999998888899999999999999999987665 9999999999999
Q ss_pred CccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCccCCc
Q 004232 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSGEIP 275 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~~~~p 275 (766)
+|++++.. ..++|++|++++|.+++..+. .+++|++|++++|++++..+.. ...|+.|++++|.+++..|
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 99998532 348999999999999986654 3688999999999999876643 3679999999999999877
Q ss_pred ccc-cCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCC
Q 004232 276 KQY-GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNES 354 (766)
Q Consensus 276 ~~~-~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~ 354 (766)
..+ ..+++|++|++++|++++.++ ...+++|+.|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 777 479999999999999998854 3458999999999999995 5556888999999999999999 5788899999
Q ss_pred CCceeecCCCcCC
Q 004232 355 DKRVVKFRGNCLS 367 (766)
Q Consensus 355 ~l~~l~l~~N~l~ 367 (766)
+++.+++++|.+.
T Consensus 238 ~L~~L~l~~N~~~ 250 (317)
T 3o53_A 238 NLEHFDLRGNGFH 250 (317)
T ss_dssp TCCEEECTTCCCB
T ss_pred CCCEEEccCCCcc
Confidence 9999999999886
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1e-25 Score=254.52 Aligned_cols=215 Identities=20% Similarity=0.241 Sum_probs=191.4
Q ss_pred CCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEE
Q 004232 140 RLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDL 219 (766)
Q Consensus 140 ~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 219 (766)
.+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |+.+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999999888999999999999999999998766 9999999999999999986432 3899999
Q ss_pred EccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCCcCccCCccccc-CCCCCCEEEccCCcCC
Q 004232 220 DLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNNSFSGEIPKQYG-QLNQLQQLDMSFNALR 295 (766)
Q Consensus 220 ~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~ 295 (766)
+|++|.+++.++. .+++|+.|+|++|.+++..|.. ...|+.|+|++|.+++..|..+. .+++|+.|+|++|.++
T Consensus 105 ~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 105 HAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp ECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred ECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 9999999987664 4689999999999999887754 36789999999999998888886 8999999999999999
Q ss_pred CCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 296 GMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 296 ~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
+.++ +..+++|+.|+|++|.+++. |..+..+++|+.|+|++|.+++ +|..+..+++++.+++++|.+.
T Consensus 183 ~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 183 DVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFH 250 (487)
T ss_dssp EEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBC
T ss_pred cccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCc
Confidence 9854 44699999999999999975 5558889999999999999996 7888999999999999999876
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1e-23 Score=219.49 Aligned_cols=201 Identities=24% Similarity=0.309 Sum_probs=145.7
Q ss_pred CCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccC
Q 004232 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (766)
++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 4568888888864 665553 6789999999998877667888888899999988888876666778888888888888
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccc
Q 004232 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~ 278 (766)
|++++..+..|..+++|++|+|++|.+++..+. +..+++|++|++++|.+++ ..+..|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---------------------~~~~~~ 153 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS---------------------LPKGVF 153 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc---------------------cCHhHc
Confidence 888876666777888888888888888766554 5667777777666665542 223345
Q ss_pred cCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCcccc
Q 004232 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 279 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
+.+++|+.|++++|++++.++..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.+
T Consensus 154 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 666777777777777777776666677777777777777765544456666666666666666553
No 321
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1e-23 Score=221.80 Aligned_cols=201 Identities=24% Similarity=0.319 Sum_probs=101.2
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (766)
+.++++|+.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 455566666666666654 3343332 4566666666666555555566666666666666655543221 4555555
Q ss_pred EEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCcc
Q 004232 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 194 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~ 272 (766)
+|+|++|+++ .+|..+..+++|++|+|++|++++.++. +..+++|++|+|++|++++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~--------------------- 138 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--------------------- 138 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC---------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc---------------------
Confidence 5555555555 4455555555555555555555544432 4444444444444443332
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCcc
Q 004232 273 EIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKL 342 (766)
Q Consensus 273 ~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l 342 (766)
..+..|..+++|+.|+|++|+++++++..|..+++|+.|+|++|+++ .+|..+....+|+.++|++|.+
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 22233344445555555555555444444444455555555555544 3444443344444444444443
No 322
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=4.2e-24 Score=227.19 Aligned_cols=228 Identities=22% Similarity=0.271 Sum_probs=175.3
Q ss_pred CCCCEEeccccccccc-CCc--cccCCCCCCEEecccccCccCCCccC--CCCCCCCEEEccCCcCCCCCC----cccCC
Q 004232 118 TSLRVLSLVSLGIWGS-LPD--KIHRLYSLEYLDLSSNFLFGSVPPKI--STMVKLQTLILDDNFFNNTIP----NWFDS 188 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~-~p~--~~~~L~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~ 188 (766)
..++.|.+.++.+... +.. .+..+++|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3477888887766432 111 13345779999999999999999888 899999999999999998666 44568
Q ss_pred CCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCC---CCC--CCCCCCCCEEECCCCCCCCCCCCCCCCCcEE
Q 004232 189 LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGS---LPD--LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMA 263 (766)
Q Consensus 189 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~--~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l 263 (766)
+++|++|+|++|++++..|..+..+++|++|+|++|++.+. .+. +..+++|++|+|++|+++..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l----------- 212 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP----------- 212 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-----------
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-----------
Confidence 99999999999999988888999999999999999998752 222 36788888888888877520
Q ss_pred EccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCC---CCCCeEEeecCcCcccCCccCCCCCCccEEeCcCC
Q 004232 264 FLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSL---PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN 340 (766)
Q Consensus 264 ~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l---~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N 340 (766)
.+..+..++.+++|++|||++|++++..|+.+..+ ++|++|+|++|+|+ .+|..+. ++|+.|||++|
T Consensus 213 -------~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N 282 (310)
T 4glp_A 213 -------TGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSN 282 (310)
T ss_dssp -------HHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSC
T ss_pred -------HHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCC
Confidence 00111135677888888888888888876666666 68888899888888 6777664 68888999999
Q ss_pred ccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 341 KLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 341 ~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
++++. |. +..+++|+.|++++|+++.
T Consensus 283 ~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 283 RLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 88863 33 5667888888999888864
No 323
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.6e-23 Score=220.27 Aligned_cols=205 Identities=22% Similarity=0.237 Sum_probs=177.5
Q ss_pred cccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCC
Q 004232 137 KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL 216 (766)
Q Consensus 137 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 216 (766)
.+.++++|+++++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+ . ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcC
Confidence 4788999999999999997 5776665 689999999999998888899999999999999999986433 2 788999
Q ss_pred CEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCC
Q 004232 217 SDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRG 296 (766)
Q Consensus 217 ~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 296 (766)
++|+|++|+++..+..+..+++|++|++++|++++ ..|..|..+++|+.|+|++|++++
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~---------------------l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTS---------------------LPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCC---------------------CCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCcc---------------------cCHHHHcCCCCCCEEECCCCCCCc
Confidence 99999999998655557788888888887776653 445678899999999999999999
Q ss_pred CCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 297 MPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 297 ~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
.++..|..+++|+.|+|++|+|++..+..+..+++|+.|+|++|+++ .+|..+.....++.+++.+|.+..
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 99998999999999999999999666667788999999999999999 788888888899999999998864
No 324
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.91 E-value=7e-26 Score=259.74 Aligned_cols=177 Identities=14% Similarity=0.099 Sum_probs=116.5
Q ss_pred ceecCCceeEEEEE-ecCCceEEEEEccCC----------hhhhHHHHHHHHHHHHhC-CCCCcccccceeecCCCCCCc
Q 004232 490 IMGEGSYGKLYKGR-LENGTSVAIRCLPSS----------KKYTVRNLKLRLDLLAKL-RHPHLVCLLGHCIDGGGRDDY 557 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~-~~~g~~vAvK~l~~~----------~~~~~~~~~~e~~~l~~l-~Hpniv~l~g~~~~~~~~~~~ 557 (766)
..+.|++|.++.++ +..|+.+|||++... .....++|.+|+++|+++ .|+||+++++++.+.+
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~----- 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ----- 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-----
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-----
Confidence 35667777666654 446899999999653 123457799999999999 7999999999998764
Q ss_pred CcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecC
Q 004232 558 AVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDY 637 (766)
Q Consensus 558 ~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DF 637 (766)
..||||||++||+|.+.|.+..+ ++.. +|+.||+.||+|+|++ +||||||||+|||+++++.+||+||
T Consensus 316 ---~~yLVMEyv~G~~L~d~i~~~~~---l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 ---SGWLVMEKLPGRLLSDMLAAGEE---IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp ---EEEEEEECCCSEEHHHHHHTTCC---CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred ---EEEEEEecCCCCcHHHHHHhCCC---CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 79999999999999999986543 5543 4889999999999998 8999999999999999999999999
Q ss_pred CCCcccccccccc----cC----CCCCCcccCCCCCCCEeehhHHHHHHhcCCCc
Q 004232 638 GLSIVSEDINSVG----GK----QEDPNSWEMTKLEDDVFSFGFMLLESVAGPSV 684 (766)
Q Consensus 638 Gla~~~~~~~~~~----~~----~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p 684 (766)
|+|+......... ++ .++.. ...+..++|+||.|++++++.+|..+
T Consensus 384 GlAr~~~~~~~~~~t~vGTp~YmAPE~l-~g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 384 GSIVTTPQDCSWPTNLVQSFFVFVNELF-AENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccCeeCCCCCccccCceechhhccHHHh-CCCCCCcccccccccchhhhccccch
Confidence 9997654321110 00 01100 12234578999999998888776443
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.7e-24 Score=224.18 Aligned_cols=222 Identities=21% Similarity=0.274 Sum_probs=188.7
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEE
Q 004232 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (766)
Q Consensus 117 l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (766)
+.++..+++..+.+.... .+..+++|+.|++++|.+.. + +.+..+++|++|+|++|.+++. ..+.++++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 344556677777665543 36788999999999999863 3 4588999999999999999863 4789999999999
Q ss_pred ccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCc
Q 004232 197 MRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP 275 (766)
Q Consensus 197 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p 275 (766)
|++|++++..|..+..+++|++|+|++|++++.++. +..+++|++|++++|++++ ..|
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~ 150 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS---------------------LPK 150 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCT
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc---------------------cCH
Confidence 999999988888889999999999999999987776 6888999998888877653 445
Q ss_pred ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCC
Q 004232 276 KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESD 355 (766)
Q Consensus 276 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~ 355 (766)
..|+.+++|+.|++++|++++.++..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..| .
T Consensus 151 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~-------~ 223 (272)
T 3rfs_A 151 GVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------G 223 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT-------T
T ss_pred HHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc-------H
Confidence 567889999999999999999999889999999999999999999888888999999999999999986544 6
Q ss_pred CceeecCCCcCCCCcCC
Q 004232 356 KRVVKFRGNCLSSNVQN 372 (766)
Q Consensus 356 l~~l~l~~N~l~~~~~~ 372 (766)
++.+++..|.++|.+|.
T Consensus 224 l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 224 IRYLSEWINKHSGVVRN 240 (272)
T ss_dssp THHHHHHHHHTGGGBBC
T ss_pred HHHHHHHHHhCCCcccC
Confidence 88899999999986654
No 326
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.3e-23 Score=211.53 Aligned_cols=195 Identities=17% Similarity=0.228 Sum_probs=134.7
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEeccccc-CccCCCccCCCCCCCCEEEccC-CcCCCCCCcccCCCCCCCEEE
Q 004232 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFGSVPPKISTMVKLQTLILDD-NFFNNTIPNWFDSLPSLTFLS 196 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ 196 (766)
+|++|+|++|++++..+..|.++++|++|+|++|. +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 78889999999888777788889999999999886 7766666788888888888888 888877777888888888888
Q ss_pred ccCccCCCCCCccccCCCCCC---EEEccCC-ccCCCCCC-CCCCCCCC-EEECCCCCCCCCCCCCCCCCcEEEccCCcC
Q 004232 197 MRNNKLAGPFPSSIQRISTLS---DLDLSKN-AISGSLPD-LSSLGSLN-VLNLSDNKLDSNLPKLPRGLVMAFLSNNSF 270 (766)
Q Consensus 197 L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~-~~~l~~L~-~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l 270 (766)
+++|++++ +|. +..+++|+ +|++++| .+++..+. +..+++|+ +|++++|+++. +|
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~-i~---------------- 172 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQ---------------- 172 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-EC----------------
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-cC----------------
Confidence 88888876 665 77777777 8888888 77765554 66777777 77777776652 11
Q ss_pred ccCCcccccCCCCCCEEEccCCc-CCCCCccccCCC-CCCCeEEeecCcCcccCCccCCCCCCccEEeCcCC
Q 004232 271 SGEIPKQYGQLNQLQQLDMSFNA-LRGMPPPAIFSL-PNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNN 340 (766)
Q Consensus 271 ~~~~p~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l-~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N 340 (766)
+..|.. ++|+.|++++|+ ++++++..|..+ ++|+.|+|++|++++ +|.. .+.+|+.|+++++
T Consensus 173 ----~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 173 ----GYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp ----TTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred ----HhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 111222 455555555553 555555555555 555555555555552 3322 3445555555543
No 327
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.1e-23 Score=223.93 Aligned_cols=202 Identities=18% Similarity=0.218 Sum_probs=157.9
Q ss_pred CCCCCCEEecccccccccCCccc--cCCCCCCEEecccccCccCCC----ccCCCCCCCCEEEccCCcCCCCCCcccCCC
Q 004232 116 RLTSLRVLSLVSLGIWGSLPDKI--HRLYSLEYLDLSSNFLFGSVP----PKISTMVKLQTLILDDNFFNNTIPNWFDSL 189 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~~~p~~~--~~L~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 189 (766)
.+++|++|+|++|.+.+..|..+ .++++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..|+++
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 45679999999999999999998 999999999999999998665 455689999999999999999999999999
Q ss_pred CCCCEEEccCccCCCC--C--CccccCCCCCCEEEccCCccCCCCCC----CCCCCCCCEEECCCCCCCCCCCCCCCCCc
Q 004232 190 PSLTFLSMRNNKLAGP--F--PSSIQRISTLSDLDLSKNAISGSLPD----LSSLGSLNVLNLSDNKLDSNLPKLPRGLV 261 (766)
Q Consensus 190 ~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 261 (766)
++|++|+|++|++.+. + +..+..+++|++|+|++|+++...+. +..+++|++|+|++|++++..|
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p------- 241 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN------- 241 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC-------
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch-------
Confidence 9999999999998752 2 23347899999999999999743321 4678899999999988876533
Q ss_pred EEEccCCcCccCCcccccCC---CCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCc
Q 004232 262 MAFLSNNSFSGEIPKQYGQL---NQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDIS 338 (766)
Q Consensus 262 ~l~ls~N~l~~~~p~~~~~l---~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls 338 (766)
..+..+ ++|++|+|++|+++.+|. .+. ++|+.|+|++|++++. |. +..+++|+.|+++
T Consensus 242 --------------~~~~~~~~~~~L~~L~Ls~N~l~~lp~-~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~ 302 (310)
T 4glp_A 242 --------------PSAPRCMWSSALNSLNLSFAGLEQVPK-GLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLD 302 (310)
T ss_dssp --------------SCCSSCCCCTTCCCEECCSSCCCSCCS-CCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECS
T ss_pred --------------hhHHhccCcCcCCEEECCCCCCCchhh-hhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECc
Confidence 333333 577777777777775443 332 6777777777777753 32 4556777777777
Q ss_pred CCccc
Q 004232 339 NNKLT 343 (766)
Q Consensus 339 ~N~l~ 343 (766)
+|+++
T Consensus 303 ~N~l~ 307 (310)
T 4glp_A 303 GNPFL 307 (310)
T ss_dssp STTTS
T ss_pred CCCCC
Confidence 77775
No 328
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.89 E-value=1.1e-21 Score=226.40 Aligned_cols=229 Identities=25% Similarity=0.297 Sum_probs=189.3
Q ss_pred cCCCcccCCcccccccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCC
Q 004232 100 SLSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 100 ~l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.++.|.+ ..+|..+. ++|+.|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.++
T Consensus 46 ~ls~n~L-~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~ 114 (622)
T 3g06_A 46 NVGESGL-TTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLT 114 (622)
T ss_dssp ECCSSCC-SCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCC
T ss_pred EecCCCc-CccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCC
Confidence 3444433 36777665 79999999999997 4665 67999999999999974 665 7899999999999998
Q ss_pred CCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q 004232 180 NTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRG 259 (766)
Q Consensus 180 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 259 (766)
+ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|.+++..+ .+++|+.|++++|.+++ +|..+.+
T Consensus 115 ~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~-l~~~~~~ 182 (622)
T 3g06_A 115 H-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPA---LPSELCKLWAYNNQLTS-LPMLPSG 182 (622)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCCCCTT
T ss_pred C-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCC---ccCCCCEEECCCCCCCC-CcccCCC
Confidence 6 454 67899999999999985 6654 4899999999999987433 35789999999999987 5577789
Q ss_pred CcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcC
Q 004232 260 LVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISN 339 (766)
Q Consensus 260 l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~ 339 (766)
|+.|++++|++++ +|.. +++|+.|++++|.++.++. .+++|+.|+|++|+|++ +| ..+++|+.|++++
T Consensus 183 L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 183 LQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSG 250 (622)
T ss_dssp CCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCS
T ss_pred CcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCC
Confidence 9999999999996 5543 5789999999999998764 24889999999999996 66 4568899999999
Q ss_pred CccccCCCCCCCCCCCCceeecCCCcCC
Q 004232 340 NKLTGGLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 340 N~l~g~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
|+|+ .+|. .+++|+.|++++|.++
T Consensus 251 N~L~-~lp~---~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 251 NRLT-SLPM---LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp SCCS-CCCC---CCTTCCEEECCSSCCC
T ss_pred CCCC-cCCc---ccccCcEEeCCCCCCC
Confidence 9999 5666 5678999999999988
No 329
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=7.3e-23 Score=208.96 Aligned_cols=203 Identities=18% Similarity=0.239 Sum_probs=170.5
Q ss_pred cCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCc-CCCCCCcccCCCCCCCEEEccC-ccCCCCCCccc
Q 004232 133 SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF-FNNTIPNWFDSLPSLTFLSMRN-NKLAGPFPSSI 210 (766)
Q Consensus 133 ~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~ 210 (766)
.+|. +. .+|++|+|++|++++..+..|.++++|++|+|++|. ++...+..|.++++|++|++++ |++++..+..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 4555 33 389999999999998777799999999999999997 8877777899999999999999 99998777889
Q ss_pred cCCCCCCEEEccCCccCCCCCCCCCCCCCC---EEECCCC-CCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCC-
Q 004232 211 QRISTLSDLDLSKNAISGSLPDLSSLGSLN---VLNLSDN-KLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQ- 285 (766)
Q Consensus 211 ~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~---~L~ls~N-~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~- 285 (766)
..+++|++|++++|.+++ +|.+..+++|+ +|++++| .+ ++..+..|..+++|+
T Consensus 102 ~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l---------------------~~i~~~~~~~l~~L~~ 159 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYM---------------------TSIPVNAFQGLCNETL 159 (239)
T ss_dssp ECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTC---------------------CEECTTTTTTTBSSEE
T ss_pred CCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcch---------------------hhcCcccccchhccee
Confidence 999999999999999997 56688787777 7766666 44 444556788999999
Q ss_pred EEEccCCcCCCCCccccCCCCCCCeEEeecCc-CcccCCccCCCC-CCccEEeCcCCccccCCCCCCCCCCCCceeecCC
Q 004232 286 QLDMSFNALRGMPPPAIFSLPNISDLNLASNK-FSGSLPKNLNCG-GKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (766)
Q Consensus 286 ~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~~-~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (766)
.|++++|+++.+++..+.. ++|+.|+|++|+ +++..+..+..+ .+|+.||+++|++++ +|.. .+.+++.|++++
T Consensus 160 ~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 160 TLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARN 235 (239)
T ss_dssp EEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTT
T ss_pred EEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccC
Confidence 9999999999777666655 899999999995 987667788888 999999999999995 4443 566788888776
Q ss_pred C
Q 004232 364 N 364 (766)
Q Consensus 364 N 364 (766)
+
T Consensus 236 ~ 236 (239)
T 2xwt_C 236 T 236 (239)
T ss_dssp C
T ss_pred c
Confidence 5
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=6.6e-22 Score=203.46 Aligned_cols=178 Identities=28% Similarity=0.312 Sum_probs=116.2
Q ss_pred CCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccC
Q 004232 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (766)
.+.++++++.+. .+|..+. ++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 455666666664 3554443 4677777777777766666777777777777777777776666677777777777777
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccc
Q 004232 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~ 278 (766)
|++++..+..|..+++|++|+|++|.+++..+. +..+++|++|+|++|++++ ..+..|
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---------------------~~~~~~ 151 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS---------------------IPAGAF 151 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc---------------------cCHHHc
Confidence 777766666667777777777777777655544 4556666666655554432 233345
Q ss_pred cCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCccc
Q 004232 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (766)
Q Consensus 279 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (766)
+.+++|+.|+|++|++++.++..+..+++|+.|+|++|.+++.
T Consensus 152 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 152 DKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 5666666666666666666666666666666666666666543
No 331
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.8e-22 Score=202.50 Aligned_cols=179 Identities=23% Similarity=0.314 Sum_probs=146.5
Q ss_pred CCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEcc
Q 004232 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
+.+++++++|.++ .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 5678999999987 5776665 588999999999998888889999999999999999998888888889999999999
Q ss_pred CCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccc
Q 004232 223 KNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPA 301 (766)
Q Consensus 223 ~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~ 301 (766)
+|++++.++. +..+++|++|+|++|++++ ..+..|+.+++|+.|+|++|++++.++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 150 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKS---------------------LPSGVFDRLTKLKELRLNTNQLQSIPAGA 150 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCC---------------------cChhHhccCCcccEEECcCCcCCccCHHH
Confidence 9998876654 5777888888777776653 33445677888888888888888888877
Q ss_pred cCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccC
Q 004232 302 IFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGG 345 (766)
Q Consensus 302 ~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~ 345 (766)
|..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 88888888888888888877777778888888888888888764
No 332
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.4e-22 Score=215.04 Aligned_cols=195 Identities=24% Similarity=0.402 Sum_probs=137.3
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (766)
+..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+.+ +++ +..+++|++|+|++|.+++. | .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 4567788888888888754 44 57888888888888888875 444 88888888888888888753 3 577888888
Q ss_pred EEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccC
Q 004232 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 194 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~ 273 (766)
+|+|++|++++ +|. +..+++|++|+|++|.+++..+ +..+++|++|++++|.+++
T Consensus 111 ~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~---------------------- 165 (308)
T 1h6u_A 111 TLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSD---------------------- 165 (308)
T ss_dssp EEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCC----------------------
T ss_pred EEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCC----------------------
Confidence 88888888875 333 7788888888888888876544 7777778888777776653
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCcccc
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
++. +..+++|+.|++++|++++.++ +..+++|+.|+|++|++++..| +..+++|+.|++++|.+++
T Consensus 166 ~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred Chh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 222 5566666666666666666554 5566666666666666664432 5556666666666666653
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=1.7e-23 Score=227.47 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=193.6
Q ss_pred CCCcccCCcccccccCCCCCCEEecccccccccCC----ccccCCC-CCCEEecccccCccCCCccCCCC-----CCCCE
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLGIWGSLP----DKIHRLY-SLEYLDLSSNFLFGSVPPKISTM-----VKLQT 170 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~ 170 (766)
++.|...+.+|..+...++|++|+|++|.+.+..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 45555666777777888889999999999988777 7788998 89999999999988878777775 99999
Q ss_pred EEccCCcCCCCCCccc----CCC-CCCCEEEccCccCCCCCCcccc----C-CCCCCEEEccCCccCCCCCC-----CCC
Q 004232 171 LILDDNFFNNTIPNWF----DSL-PSLTFLSMRNNKLAGPFPSSIQ----R-ISTLSDLDLSKNAISGSLPD-----LSS 235 (766)
Q Consensus 171 L~L~~N~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~~~~p~-----~~~ 235 (766)
|+|++|.+++..+..+ ..+ ++|++|+|++|++++..+..+. . .++|++|+|++|.++..... +..
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 164 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAA 164 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhc
Confidence 9999999998777644 444 8999999999999877665543 3 36999999999999853321 344
Q ss_pred CC-CCCEEECCCCCCCCCCCC--------CCCCCcEEEccCCcCccC----CcccccC-CCCCCEEEccCCcCCCCCc--
Q 004232 236 LG-SLNVLNLSDNKLDSNLPK--------LPRGLVMAFLSNNSFSGE----IPKQYGQ-LNQLQQLDMSFNALRGMPP-- 299 (766)
Q Consensus 236 l~-~L~~L~ls~N~l~~~~p~--------~~~~l~~l~ls~N~l~~~----~p~~~~~-l~~L~~L~ls~N~l~~~~~-- 299 (766)
++ +|++|+|++|++++..+. .+..|+.|+|++|.+++. ++..+.. .++|+.|+|++|.+++..+
T Consensus 165 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 244 (362)
T 3goz_A 165 IPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLEN 244 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHH
T ss_pred CCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHH
Confidence 44 899999999999765542 235899999999999873 4555655 4599999999999998765
Q ss_pred --cccCCCCCCCeEEeecCcCccc-------CCccCCCCCCccEEeCcCCccccC
Q 004232 300 --PAIFSLPNISDLNLASNKFSGS-------LPKNLNCGGKLVFFDISNNKLTGG 345 (766)
Q Consensus 300 --~~~~~l~~L~~L~L~~N~l~g~-------~p~~~~~~~~L~~L~ls~N~l~g~ 345 (766)
..+..+++|+.|+|++|.+.+. ++..+..+++|+.||+++|++...
T Consensus 245 l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 245 LKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3456788999999999995533 234567788899999999998765
No 334
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.3e-24 Score=238.67 Aligned_cols=243 Identities=20% Similarity=0.252 Sum_probs=173.0
Q ss_pred ccccccCCCCCCEEecccccccccC----CccccCCCCCCEEecccc---cCccCCCccC-------CCCCCCCEEEccC
Q 004232 110 FVTTLARLTSLRVLSLVSLGIWGSL----PDKIHRLYSLEYLDLSSN---FLFGSVPPKI-------STMVKLQTLILDD 175 (766)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l~~~~----p~~~~~L~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~~ 175 (766)
++..+..+++|+.|+|++|.+.... +..|..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 4566778888999999998887763 344778888999988885 4555666555 6788888888888
Q ss_pred CcCCC----CCCcccCCCCCCCEEEccCccCCCCCCccc----cCC---------CCCCEEEccCCccC-CCCC----CC
Q 004232 176 NFFNN----TIPNWFDSLPSLTFLSMRNNKLAGPFPSSI----QRI---------STLSDLDLSKNAIS-GSLP----DL 233 (766)
Q Consensus 176 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l---------~~L~~L~Ls~N~l~-~~~p----~~ 233 (766)
|.++. .+|..+.++++|++|+|++|.+++..+..+ ..+ ++|++|+|++|.++ +.++ .+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 88887 467777888888888888888864433333 333 78888888888876 3344 24
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCC----CCCccccCCCCCCC
Q 004232 234 SSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALR----GMPPPAIFSLPNIS 309 (766)
Q Consensus 234 ~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~----~~~~~~~~~l~~L~ 309 (766)
..+++|++|++++|+++.. .+...+|..+..+++|+.|+|++|.++ +.+|..+..+++|+
T Consensus 184 ~~~~~L~~L~L~~n~l~~~----------------g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~ 247 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPE----------------GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 247 (386)
T ss_dssp HHCTTCCEEECCSSCCCHH----------------HHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCC
T ss_pred HhCCCcCEEECcCCCCCHh----------------HHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcC
Confidence 5666777777777765410 000123446677788888888888875 55566777788888
Q ss_pred eEEeecCcCccc----CCccC--CCCCCccEEeCcCCcccc----CCCCCC-CCCCCCceeecCCCcCCC
Q 004232 310 DLNLASNKFSGS----LPKNL--NCGGKLVFFDISNNKLTG----GLPSCL-SNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 310 ~L~L~~N~l~g~----~p~~~--~~~~~L~~L~ls~N~l~g----~~p~~~-~~~~~l~~l~l~~N~l~~ 368 (766)
.|+|++|.+++. +|..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|.+++
T Consensus 248 ~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 248 ELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred EEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 888888888765 45555 337788888888888887 467666 557788888888888874
No 335
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=6.7e-22 Score=209.86 Aligned_cols=209 Identities=22% Similarity=0.329 Sum_probs=176.4
Q ss_pred EEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCcc
Q 004232 122 VLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNK 201 (766)
Q Consensus 122 ~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 201 (766)
.+.+..+.+...++ +.++++|++|++++|.+.. +| .+..+++|++|+|++|.+++..+ +.++++|++|+|++|+
T Consensus 23 ~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 34455555554433 5678899999999999974 55 68999999999999999986544 9999999999999999
Q ss_pred CCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCC
Q 004232 202 LAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQL 281 (766)
Q Consensus 202 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l 281 (766)
+++. +.+..+++|++|+|++|.+++. +.+..+++|++|++++|.+++ ++. ++.+
T Consensus 97 l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~----------------------~~~-l~~l 150 (308)
T 1h6u_A 97 LKNV--SAIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQITN----------------------ISP-LAGL 150 (308)
T ss_dssp CSCC--GGGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCCC----------------------CGG-GGGC
T ss_pred CCCc--hhhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccCc----------------------Ccc-ccCC
Confidence 9863 3689999999999999999874 558889999999998887753 222 7789
Q ss_pred CCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeec
Q 004232 282 NQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKF 361 (766)
Q Consensus 282 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l 361 (766)
++|+.|++++|++++.++ +..+++|+.|+|++|++++..+ +..+++|+.|++++|++++..| +..+++|+.+++
T Consensus 151 ~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l 224 (308)
T 1h6u_A 151 TNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEE
T ss_pred CCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEc
Confidence 999999999999998776 8999999999999999986543 7889999999999999997664 788999999999
Q ss_pred CCCcCCC
Q 004232 362 RGNCLSS 368 (766)
Q Consensus 362 ~~N~l~~ 368 (766)
++|.+++
T Consensus 225 ~~N~i~~ 231 (308)
T 1h6u_A 225 TNQTITN 231 (308)
T ss_dssp EEEEEEC
T ss_pred cCCeeec
Confidence 9999875
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=7.5e-24 Score=230.35 Aligned_cols=247 Identities=19% Similarity=0.152 Sum_probs=201.7
Q ss_pred EEecccccccccCCccccCCCCCCEEecccccCccCCC----ccCCCCC-CCCEEEccCCcCCCCCCcccCCC-----CC
Q 004232 122 VLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVP----PKISTMV-KLQTLILDDNFFNNTIPNWFDSL-----PS 191 (766)
Q Consensus 122 ~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 191 (766)
.++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999988888889999999999987776 7788898 99999999999998888777765 99
Q ss_pred CCEEEccCccCCCCCCcccc----CC-CCCCEEEccCCccCCCCCC-----CCC-CCCCCEEECCCCCCCCCCC------
Q 004232 192 LTFLSMRNNKLAGPFPSSIQ----RI-STLSDLDLSKNAISGSLPD-----LSS-LGSLNVLNLSDNKLDSNLP------ 254 (766)
Q Consensus 192 L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~-----~~~-l~~L~~L~ls~N~l~~~~p------ 254 (766)
|++|+|++|++++..+..+. .+ ++|++|+|++|.+++..+. +.. .++|++|+|++|.++..-.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999987777544 44 8999999999999876553 344 3699999999999985322
Q ss_pred --CCCCCCcEEEccCCcCccCCccccc----CC-CCCCEEEccCCcCCCCC----ccccCC-CCCCCeEEeecCcCcccC
Q 004232 255 --KLPRGLVMAFLSNNSFSGEIPKQYG----QL-NQLQQLDMSFNALRGMP----PPAIFS-LPNISDLNLASNKFSGSL 322 (766)
Q Consensus 255 --~~~~~l~~l~ls~N~l~~~~p~~~~----~l-~~L~~L~ls~N~l~~~~----~~~~~~-l~~L~~L~L~~N~l~g~~ 322 (766)
..+..|+.|+|++|++++..+..+. .+ ++|+.|||++|.++... +..+.. .++|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 2345899999999999988776554 44 69999999999998843 334444 459999999999998754
Q ss_pred C----ccCCCCCCccEEeCcCCccccC-------CCCCCCCCCCCceeecCCCcCCC
Q 004232 323 P----KNLNCGGKLVFFDISNNKLTGG-------LPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 323 p----~~~~~~~~L~~L~ls~N~l~g~-------~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+ ..+..+++|+.|++++|.+++. ++..+..++.++.+++++|.+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 4 3456778999999999995533 34467788889999999998864
No 337
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1e-21 Score=223.95 Aligned_cols=184 Identities=27% Similarity=0.396 Sum_probs=122.8
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcc
Q 004232 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMR 198 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 198 (766)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 68888888888876 776553 78888899888887 566 457888888888888887 666 655 88888888
Q ss_pred CccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccc
Q 004232 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~ 278 (766)
+|+|++ +|. .+++|+.|+|++|.+++ +|. .+++|++|+|++|++++ +|.+..+|+.|+|++|+|+ .+|. |
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCC-chhh-H
Confidence 888886 665 57888888888888886 444 56778888888887766 3334445555555555555 3444 3
Q ss_pred cCCCCC-------CEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccC
Q 004232 279 GQLNQL-------QQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNL 326 (766)
Q Consensus 279 ~~l~~L-------~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~ 326 (766)
.. +| +.|+|++|+|+.+| ..++.+++|+.|+|++|+|++.+|..+
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~~lp-~~l~~l~~L~~L~L~~N~l~~~~p~~l 250 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRITHIP-ENILSLDPTCTIILEDNPLSSRIRESL 250 (571)
T ss_dssp C----------CCEEEECCSSCCCCCC-GGGGGSCTTEEEECCSSSCCHHHHHHH
T ss_pred HH--hhhcccccceEEecCCCcceecC-HHHhcCCCCCEEEeeCCcCCCcCHHHH
Confidence 32 44 55555555555433 234445555555555555555555443
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=2.2e-24 Score=236.75 Aligned_cols=217 Identities=18% Similarity=0.244 Sum_probs=174.6
Q ss_pred ccCCccccCCCCCCEEecccccCccC----CCccCCCCCCCCEEEccCC---cCCCCCCccc-------CCCCCCCEEEc
Q 004232 132 GSLPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDN---FFNNTIPNWF-------DSLPSLTFLSM 197 (766)
Q Consensus 132 ~~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~L 197 (766)
..++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|
T Consensus 22 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~L 101 (386)
T 2ca6_A 22 KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRL 101 (386)
T ss_dssp HTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEEC
T ss_pred HHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEEC
Confidence 35777889999999999999999865 3445789999999999996 4455666655 78999999999
Q ss_pred cCccCCC----CCCccccCCCCCCEEEccCCccCCCCCC-----CCCC---------CCCCEEECCCCCCCCCCCCCCCC
Q 004232 198 RNNKLAG----PFPSSIQRISTLSDLDLSKNAISGSLPD-----LSSL---------GSLNVLNLSDNKLDSNLPKLPRG 259 (766)
Q Consensus 198 ~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-----~~~l---------~~L~~L~ls~N~l~~~~p~~~~~ 259 (766)
++|++++ .+|..+..+++|++|+|++|.++...+. +..+ ++|++|++++|+++.
T Consensus 102 s~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~-------- 173 (386)
T 2ca6_A 102 SDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN-------- 173 (386)
T ss_dssp CSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG--------
T ss_pred CCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc--------
Confidence 9999987 4777888999999999999998643221 2233 677777777776641
Q ss_pred CcEEEccCCcCccCCc---ccccCCCCCCEEEccCCcCC--C---CCccccCCCCCCCeEEeecCcCc----ccCCccCC
Q 004232 260 LVMAFLSNNSFSGEIP---KQYGQLNQLQQLDMSFNALR--G---MPPPAIFSLPNISDLNLASNKFS----GSLPKNLN 327 (766)
Q Consensus 260 l~~l~ls~N~l~~~~p---~~~~~l~~L~~L~ls~N~l~--~---~~~~~~~~l~~L~~L~L~~N~l~----g~~p~~~~ 327 (766)
+.+| ..+..+++|+.|++++|+++ | ..+..+..+++|+.|+|++|.++ +.+|..+.
T Consensus 174 ------------~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~ 241 (386)
T 2ca6_A 174 ------------GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALK 241 (386)
T ss_dssp ------------GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGG
T ss_pred ------------HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHc
Confidence 2334 56778899999999999998 3 34447888999999999999996 67888889
Q ss_pred CCCCccEEeCcCCccccC----CCCCC--CCCCCCceeecCCCcCCC
Q 004232 328 CGGKLVFFDISNNKLTGG----LPSCL--SNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 328 ~~~~L~~L~ls~N~l~g~----~p~~~--~~~~~l~~l~l~~N~l~~ 368 (766)
.+++|+.|+|++|.+++. +|..+ +.+++|+.|++++|.+++
T Consensus 242 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~ 288 (386)
T 2ca6_A 242 SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 288 (386)
T ss_dssp GCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred cCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCH
Confidence 999999999999999876 56655 348899999999999875
No 339
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.7e-21 Score=220.52 Aligned_cols=187 Identities=24% Similarity=0.407 Sum_probs=161.2
Q ss_pred CCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEcc
Q 004232 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (766)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999987 787664 89999999999999 677 568999999999999997 777 665 99999999
Q ss_pred CCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCcccc
Q 004232 223 KNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAI 302 (766)
Q Consensus 223 ~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 302 (766)
+|.+++ +|. .+++|++|+|++|++++ +|..+.+|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+.+++ +
T Consensus 129 ~N~l~~-lp~--~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~--~ 198 (571)
T 3cvr_A 129 NNQLTM-LPE--LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA--V 198 (571)
T ss_dssp SSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC--C
T ss_pred CCcCCC-CCC--cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh--H
Confidence 999998 555 78999999999999987 66677889999999999997 777 66 899999999999997665 5
Q ss_pred CCCCCC-------CeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCC
Q 004232 303 FSLPNI-------SDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNE 353 (766)
Q Consensus 303 ~~l~~L-------~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~ 353 (766)
.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred HH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 54 77 99999999998 688888889999999999999999888766543
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.5e-21 Score=194.71 Aligned_cols=161 Identities=24% Similarity=0.245 Sum_probs=135.9
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+.+..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 57999999999999887888999999999999999999777777899999999999999999887788999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcc
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~ 276 (766)
++|++++..+..+..+++|++|+|++|.+++.++. +..+++|++|++++|.+.+..| .++.++++.|+++|.+|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT----TTHHHHHHHHHCTTTBBC
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC----CHHHHHHHHHhCCceeec
Confidence 99999987777789999999999999999987775 7889999999999998765433 344555555555555555
Q ss_pred cccCCC
Q 004232 277 QYGQLN 282 (766)
Q Consensus 277 ~~~~l~ 282 (766)
.++.++
T Consensus 184 ~~~~l~ 189 (208)
T 2o6s_A 184 SAGSVA 189 (208)
T ss_dssp TTSSBC
T ss_pred cCcccc
Confidence 555443
No 341
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=6e-22 Score=214.27 Aligned_cols=220 Identities=18% Similarity=0.123 Sum_probs=152.2
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCC-ccCCCCCCCCE-EEccCCcCCCCCCcccCCCCCCCEE
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVP-PKISTMVKLQT-LILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
++|+.|+|++|+|+...+.+|.+|++|++|+|++|++.+.+| ..|.++++|++ +.+++|+++...|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999987777789999999999999999877666 46788998876 5777899998889999999999999
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccC-CccCCCCCC-CCCCC-CCCEEECCCCCCCCCCCCCC--CCCcEEEccC-Cc
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSK-NAISGSLPD-LSSLG-SLNVLNLSDNKLDSNLPKLP--RGLVMAFLSN-NS 269 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~-~~~l~-~L~~L~ls~N~l~~~~p~~~--~~l~~l~ls~-N~ 269 (766)
++++|++++..+..+....++..|++++ |++....+. +..+. .+++|+|++|+++...+... ..+..+++++ |.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCc
Confidence 9999999977777777778888999876 455543332 45543 57788888888875444432 2355556653 44
Q ss_pred CccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCc
Q 004232 270 FSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNK 341 (766)
Q Consensus 270 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~ 341 (766)
++...+..|..+++|+.|||++|+|+.+|+..+.+ |+.|.+.++.--..+| .+..+++|+.++++++.
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 44333345666666666666666666666544433 3333333332223455 25555666666665543
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.7e-23 Score=224.85 Aligned_cols=202 Identities=22% Similarity=0.255 Sum_probs=140.8
Q ss_pred ccccCC--CCCCEEecccccccccCCccccCCCCCCEEecccccCccC-CCccCCCCCCCCEEEccCCcCCCCCCcccCC
Q 004232 112 TTLARL--TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGS-VPPKISTMVKLQTLILDDNFFNNTIPNWFDS 188 (766)
Q Consensus 112 ~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 188 (766)
..+..+ ++|+.|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.
T Consensus 62 ~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~ 140 (336)
T 2ast_B 62 DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK 140 (336)
T ss_dssp HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT
T ss_pred HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc
Confidence 345556 7889999999999887766 56789999999999988765 7888889999999999999988888888888
Q ss_pred CCCCCEEEccCc-cCCC-CCCccccCCCCCCEEEccCC-ccCCC-CCC-CCCCC-CCCEEECCCC--CCC-CCCCCC---
Q 004232 189 LPSLTFLSMRNN-KLAG-PFPSSIQRISTLSDLDLSKN-AISGS-LPD-LSSLG-SLNVLNLSDN--KLD-SNLPKL--- 256 (766)
Q Consensus 189 l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~-~~~l~-~L~~L~ls~N--~l~-~~~p~~--- 256 (766)
+++|++|+|++| .+++ .+|..+..+++|++|+|++| .+++. ++. +..++ +|++|++++| .++ +.+|..
T Consensus 141 ~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~ 220 (336)
T 2ast_B 141 NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR 220 (336)
T ss_dssp CTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhh
Confidence 999999999999 6765 36677888899999999999 88753 333 56778 8888888888 343 212211
Q ss_pred CCCCcEEEccCCc-CccCCcccccCCCCCCEEEccCCcCCCCCcc---ccCCCCCCCeEEeecC
Q 004232 257 PRGLVMAFLSNNS-FSGEIPKQYGQLNQLQQLDMSFNALRGMPPP---AIFSLPNISDLNLASN 316 (766)
Q Consensus 257 ~~~l~~l~ls~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~---~~~~l~~L~~L~L~~N 316 (766)
..+|+.|++++|. +++..+..+..+++|+.|++++|. +..+. .+..+++|+.|+|++|
T Consensus 221 ~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 221 CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 2344555555555 444444455555555555555553 22222 3444555555555555
No 343
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=2.2e-24 Score=242.37 Aligned_cols=259 Identities=17% Similarity=0.180 Sum_probs=158.0
Q ss_pred cccccccCCCCCCEEecccccccccCCcccc-----CCCCCCEEecccccCccC----CCccCCCCCCCCEEEccCCcCC
Q 004232 109 SFVTTLARLTSLRVLSLVSLGIWGSLPDKIH-----RLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFN 179 (766)
Q Consensus 109 ~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-----~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 179 (766)
.++..+.++++|++|+|++|.+.+..+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 3456667777777777777776544333222 245677777777776653 2445556677777777777665
Q ss_pred CCCCcccC-----CCCCCCEEEccCccCCCC----CCccccCCCCCCEEEccCCccCCCC-----CC-CCCCCCCCEEEC
Q 004232 180 NTIPNWFD-----SLPSLTFLSMRNNKLAGP----FPSSIQRISTLSDLDLSKNAISGSL-----PD-LSSLGSLNVLNL 244 (766)
Q Consensus 180 ~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-----p~-~~~l~~L~~L~l 244 (766)
...+..+. .+++|++|+|++|++++. ++..+..+++|++|+|++|.++... +. +..+++|++|++
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L 263 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEEC
Confidence 44333332 255777777777777653 4556666777777777777665421 11 234667777777
Q ss_pred CCCCCCCC----CCCC---CCCCcEEEccCCcCccCCcccccC-----CCCCCEEEccCCcCCCC----CccccCCCCCC
Q 004232 245 SDNKLDSN----LPKL---PRGLVMAFLSNNSFSGEIPKQYGQ-----LNQLQQLDMSFNALRGM----PPPAIFSLPNI 308 (766)
Q Consensus 245 s~N~l~~~----~p~~---~~~l~~l~ls~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~~----~~~~~~~l~~L 308 (766)
++|.++.. ++.. ...|+.+++++|.+++..+..+.. .++|+.|++++|.+++. .+..+..+++|
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 77776642 2221 245677777777776543333332 25777777777777654 23445556777
Q ss_pred CeEEeecCcCcccCCccCCC-----CCCccEEeCcCCcccc----CCCCCCCCCCCCceeecCCCcCC
Q 004232 309 SDLNLASNKFSGSLPKNLNC-----GGKLVFFDISNNKLTG----GLPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 309 ~~L~L~~N~l~g~~p~~~~~-----~~~L~~L~ls~N~l~g----~~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
+.|+|++|.+++..+..+.. .++|+.|++++|++++ .+|..+..+++|+.+++++|.++
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 77777777776543333321 4577777777777765 56666666677777777777665
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.85 E-value=9.5e-23 Score=219.08 Aligned_cols=244 Identities=18% Similarity=0.193 Sum_probs=199.6
Q ss_pred CCEEecccccccccCCccccCC--CCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCC-CCcccCCCCCCCEEE
Q 004232 120 LRVLSLVSLGIWGSLPDKIHRL--YSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNT-IPNWFDSLPSLTFLS 196 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~~~L--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 196 (766)
++.|++++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 678999999876 5677888 8999999999999876655 67899999999999999876 888899999999999
Q ss_pred ccCccCCCCCCccccCCCCCCEEEccCC-ccCCC-CCC-CCCCCCCCEEECCCC-CCCCC-CCC----CCCCCcEEEccC
Q 004232 197 MRNNKLAGPFPSSIQRISTLSDLDLSKN-AISGS-LPD-LSSLGSLNVLNLSDN-KLDSN-LPK----LPRGLVMAFLSN 267 (766)
Q Consensus 197 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~-~~~l~~L~~L~ls~N-~l~~~-~p~----~~~~l~~l~ls~ 267 (766)
|++|++++..|..+..+++|++|+|++| .+++. ++. +..+++|++|++++| .+++. ++. ++.+|+.|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 9999999888999999999999999999 67752 444 678899999999999 88753 232 233899999999
Q ss_pred C--cCc-cCCcccccCCCCCCEEEccCCc-CCCCCccccCCCCCCCeEEeecCc-CcccCCccCCCCCCccEEeCcCCcc
Q 004232 268 N--SFS-GEIPKQYGQLNQLQQLDMSFNA-LRGMPPPAIFSLPNISDLNLASNK-FSGSLPKNLNCGGKLVFFDISNNKL 342 (766)
Q Consensus 268 N--~l~-~~~p~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~-l~g~~p~~~~~~~~L~~L~ls~N~l 342 (766)
| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|+|++|. ++......+..+++|+.|++++| +
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i 283 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V 283 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c
Confidence 9 566 5678888999999999999999 777777789999999999999996 32221225778999999999998 3
Q ss_pred ccCCCCCCCCC-CCCceeecCCCcCCCCcC
Q 004232 343 TGGLPSCLSNE-SDKRVVKFRGNCLSSNVQ 371 (766)
Q Consensus 343 ~g~~p~~~~~~-~~l~~l~l~~N~l~~~~~ 371 (766)
+. ..+..+ ..+..|++++|.+++..+
T Consensus 284 ~~---~~~~~l~~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 284 PD---GTLQLLKEALPHLQINCSHFTTIAR 310 (336)
T ss_dssp CT---TCHHHHHHHSTTSEESCCCSCCTTC
T ss_pred CH---HHHHHHHhhCcceEEecccCccccC
Confidence 32 123323 236777899999987543
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=1.5e-20 Score=187.39 Aligned_cols=160 Identities=24% Similarity=0.289 Sum_probs=81.6
Q ss_pred CCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECC
Q 004232 167 KLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLS 245 (766)
Q Consensus 167 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls 245 (766)
+|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|.+++.++. +..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 444444444444433333344444444444444444433333344444444555544444443332 3444455555444
Q ss_pred CCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCcc
Q 004232 246 DNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKN 325 (766)
Q Consensus 246 ~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~ 325 (766)
+|++++ ..+..|..+++|+.|++++|++++.++..+..+++|+.|+|++|.+.+.
T Consensus 109 ~N~l~~---------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~---- 163 (208)
T 2o6s_A 109 TNQLQS---------------------LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT---- 163 (208)
T ss_dssp SSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC----
T ss_pred CCcCcc---------------------cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC----
Confidence 444332 2223345555666666666666666555566666666666666655543
Q ss_pred CCCCCCccEEeCcCCccccCCCCCCCCCC
Q 004232 326 LNCGGKLVFFDISNNKLTGGLPSCLSNES 354 (766)
Q Consensus 326 ~~~~~~L~~L~ls~N~l~g~~p~~~~~~~ 354 (766)
+..|+.|+++.|+++|.+|.+++++.
T Consensus 164 ---~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 164 ---CPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ---TTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ---CCCHHHHHHHHHhCCceeeccCcccc
Confidence 23566666666666666666665443
No 346
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.84 E-value=7.5e-21 Score=198.72 Aligned_cols=141 Identities=13% Similarity=0.154 Sum_probs=114.3
Q ss_pred HHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChh------------------hhHHHHHHHHHHHHhCCC
Q 004232 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK------------------YTVRNLKLRLDLLAKLRH 538 (766)
Q Consensus 477 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~~~~e~~~l~~l~H 538 (766)
.+......|++.+.||+|+||.||+|+..+|+.||||.++.... .....+.+|+++|++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444455777799999999999999997799999999964321 23567899999999999
Q ss_pred CCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCC
Q 004232 539 PHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNR 618 (766)
Q Consensus 539 pniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrd 618 (766)
| +++.+++... ..++||||+++|+|.+ +.. .....++.+++.||+|||+. +|+|||
T Consensus 163 -~-~~v~~~~~~~---------~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrD 218 (282)
T 1zar_A 163 -G-LAVPKVYAWE---------GNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGD 218 (282)
T ss_dssp -T-SSSCCEEEEE---------TTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred -C-CCcCeEEecc---------ceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCC
Confidence 5 7777765432 4699999999999998 532 12346999999999999997 899999
Q ss_pred CCCCceEEcCCCcEEEecCCCCccc
Q 004232 619 VKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 619 lk~~NILld~~~~~kl~DFGla~~~ 643 (766)
|||+|||++ ++.+||+|||+++..
T Consensus 219 lkp~NILl~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 219 LSQYNVLVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp CSTTSEEEE-TTEEEECCCTTCEET
T ss_pred CCHHHEEEE-CCcEEEEECCCCeEC
Confidence 999999999 999999999998643
No 347
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.84 E-value=5.7e-22 Score=225.97 Aligned_cols=173 Identities=15% Similarity=0.188 Sum_probs=124.0
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCCh--------hhhHHHHHHHHHHHHhCCCCCcccccceeecCCCCCCcCc
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSK--------KYTVRNLKLRLDLLAKLRHPHLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~~~~~~~~~~ 559 (766)
.+.||+|+||.||+|+. .+..+|+|+..... ....+++.+|++++++++||||+++..++...+
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~------- 412 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD------- 412 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT-------
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC-------
Confidence 56899999999999954 47788998764321 112456899999999999999997776666543
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
..++||||+++|+|.+++.+ +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+
T Consensus 413 -~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGl 475 (540)
T 3en9_A 413 -NKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGL 475 (540)
T ss_dssp -TTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTT
T ss_pred -ccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECcc
Confidence 46999999999999999864 457899999999999997 8999999999999998 999999999
Q ss_pred Ccccccccc-----------cccCCCC--CCcc----cCCCCCCCEeehhHHHHHHhcCCCcc
Q 004232 640 SIVSEDINS-----------VGGKQED--PNSW----EMTKLEDDVFSFGFMLLESVAGPSVA 685 (766)
Q Consensus 640 a~~~~~~~~-----------~~~~~~~--~~~~----~~~~~~~DV~SfGvil~ElltG~~p~ 685 (766)
++....... ..++..+ |..+ ..++..+|+||..+-..|.+.++.++
T Consensus 476 a~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 476 GKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 977644211 0111111 1111 12334568888887777777666554
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.9e-20 Score=202.43 Aligned_cols=236 Identities=17% Similarity=0.127 Sum_probs=180.5
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCC-cccCCCCCCCE-EEcc
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIP-NWFDSLPSLTF-LSMR 198 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 198 (766)
++++-++++++ .+|..+ .++|++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.. +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 56777888886 567655 3689999999999987666789999999999999999977665 56899998775 6777
Q ss_pred CccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCC-CCCCCCCCC----CCCCCcEEEccCCcCcc
Q 004232 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSD-NKLDSNLPK----LPRGLVMAFLSNNSFSG 272 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~-N~l~~~~p~----~~~~l~~l~ls~N~l~~ 272 (766)
+|+++...|..|..+++|++|++++|++++..+. +....++..|++.+ |++....+. ....++.++|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999988899999999999999999999876653 45666788888865 556543332 23457789999999985
Q ss_pred CCcccccCCCCCCEEEcc-CCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCC
Q 004232 273 EIPKQYGQLNQLQQLDMS-FNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLS 351 (766)
Q Consensus 273 ~~p~~~~~l~~L~~L~ls-~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~ 351 (766)
+|.......+|+.|+++ +|.++.+++..|..+++|+.|+|++|+|+...+..+ ..|+.|.+.++.--..+|. +.
T Consensus 169 -i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~~lP~-l~ 243 (350)
T 4ay9_X 169 -IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLKKLPT-LE 243 (350)
T ss_dssp -ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCCCCCC-TT
T ss_pred -CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcCcCCC-ch
Confidence 44444456689999997 477888888888999999999999999984433334 4555665554433336664 67
Q ss_pred CCCCCceeecCCC
Q 004232 352 NESDKRVVKFRGN 364 (766)
Q Consensus 352 ~~~~l~~l~l~~N 364 (766)
++++|+.+++.++
T Consensus 244 ~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 244 KLVALMEASLTYP 256 (350)
T ss_dssp TCCSCCEEECSCH
T ss_pred hCcChhhCcCCCC
Confidence 7888888887654
No 349
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=7e-24 Score=238.25 Aligned_cols=258 Identities=20% Similarity=0.191 Sum_probs=134.4
Q ss_pred ccccccCCCCCCEEecccccccccCCccc-cCCC----CCCEEecccccCcc----CCCccCCCCCCCCEEEccCCcCCC
Q 004232 110 FVTTLARLTSLRVLSLVSLGIWGSLPDKI-HRLY----SLEYLDLSSNFLFG----SVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l~~~~p~~~-~~L~----~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
++..+..+++|++|+|++|.+....+..+ ..+. +|++|+|++|.++. .+|..+..+++|++|+|++|.++.
T Consensus 48 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 127 (461)
T 1z7x_W 48 ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 127 (461)
T ss_dssp HHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred HHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCch
Confidence 44555666666666666666654333322 2333 46666666666652 345666666666666666666553
Q ss_pred CCCcc-----cCCCCCCCEEEccCccCCCC----CCccccCCCCCCEEEccCCccCCCCCC-C-----CCCCCCCEEECC
Q 004232 181 TIPNW-----FDSLPSLTFLSMRNNKLAGP----FPSSIQRISTLSDLDLSKNAISGSLPD-L-----SSLGSLNVLNLS 245 (766)
Q Consensus 181 ~~p~~-----~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~-----~~l~~L~~L~ls 245 (766)
..+.. +..+++|++|+|++|++++. ++..+..+++|++|+|++|.++...+. + ..+++|++|+++
T Consensus 128 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 207 (461)
T 1z7x_W 128 AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLE 207 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEcc
Confidence 32222 12345566666666666542 244445556666666666665432111 1 124456666666
Q ss_pred CCCCCCC----CCCC---CCCCcEEEccCCcCccCC-----cccccCCCCCCEEEccCCcCCCC----CccccCCCCCCC
Q 004232 246 DNKLDSN----LPKL---PRGLVMAFLSNNSFSGEI-----PKQYGQLNQLQQLDMSFNALRGM----PPPAIFSLPNIS 309 (766)
Q Consensus 246 ~N~l~~~----~p~~---~~~l~~l~ls~N~l~~~~-----p~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~ 309 (766)
+|.+++. ++.. ...|+.+++++|.+++.. +..+..+++|+.|++++|+++.. ++..+..+++|+
T Consensus 208 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 287 (461)
T 1z7x_W 208 SCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLK 287 (461)
T ss_dssp TSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCC
T ss_pred CCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcc
Confidence 6665542 1211 244566666666655421 22223455666666666666543 233444456666
Q ss_pred eEEeecCcCcccCCccCC-----CCCCccEEeCcCCccccC----CCCCCCCCCCCceeecCCCcCC
Q 004232 310 DLNLASNKFSGSLPKNLN-----CGGKLVFFDISNNKLTGG----LPSCLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 310 ~L~L~~N~l~g~~p~~~~-----~~~~L~~L~ls~N~l~g~----~p~~~~~~~~l~~l~l~~N~l~ 367 (766)
.|+|++|.+++..+..+. ..++|+.|++++|.+++. +|..+..+++|+.|++++|.++
T Consensus 288 ~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 288 ELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp EEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCH
T ss_pred eEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccc
Confidence 666666665433222221 124566666666665543 3334444555666666666554
No 350
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=2e-20 Score=215.62 Aligned_cols=174 Identities=26% Similarity=0.346 Sum_probs=93.8
Q ss_pred ccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLT 193 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 193 (766)
+..|++|+.|+|++|.+.. +| .|..|++|+.|+|++|.+.+..| +..+++|+.|+|++|.+.+ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 3445555555555555533 22 35555555555555555554322 5555555555555555543 22 455555555
Q ss_pred EEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccC
Q 004232 194 FLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 194 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~ 273 (766)
.|+|++|++++. +.+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|.++ +.
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~---------------------~~ 168 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQIS---------------------DI 168 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCC---------------------CC
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCC---------------------Cc
Confidence 555555555531 2345555555555555555543 44444555555544444433 23
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCccc
Q 004232 274 IPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (766)
.| +..+++|+.|+|++|+|++++ .+..+++|+.|+|++|++++.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEECCSEEEECC
T ss_pred hh--hccCCCCCEEECcCCCCCCCh--HHccCCCCCEEEccCCcCcCC
Confidence 33 666677777777777777652 466677777777777776643
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=1.5e-21 Score=230.68 Aligned_cols=189 Identities=17% Similarity=0.201 Sum_probs=73.0
Q ss_pred CChHHHHHHHHHHHcCCCC--CCCCCccCCCCCCCCCCCCCccceEecCCCEEEEEeCCCCCCCCCCCCccccccccCCC
Q 004232 26 LQSSQTQVLLQLRKHLEYP--KQLEIWINHGADFCYISSSTQVNITCQDNFITELKIIGDKPSNVGNFDGFASANASLSE 103 (766)
Q Consensus 26 ~~~~~~~aLl~~k~~~~~~--~~l~~W~~~~~~~C~~~~~~~~gv~C~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~l~~ 103 (766)
....++++|+++..++..+ ..-..|.......+.| .++.+...+++.+++.++.....
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~l~L~~n~~~~~--------------- 188 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTA-----TNSAVSTPLTPKIELFANGKDEA--------------- 188 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccC-----CCceecCCccceEEeeCCCCCcc---------------
Confidence 3456788999998876322 1234564432334454 35677666777777654432220
Q ss_pred cccCCcccccccCCCCCCEEecccccccc---------cCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEcc
Q 004232 104 NFSIDSFVTTLARLTSLRVLSLVSLGIWG---------SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILD 174 (766)
Q Consensus 104 n~~~~~~~~~l~~l~~L~~L~L~~n~l~~---------~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 174 (766)
+. ..|+.++|+.|.|.+ ..|+.|..+.+|+.|+|++|.+. .+|..+.++++|++|+|+
T Consensus 189 -------~~-----~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls 255 (727)
T 4b8c_D 189 -------NQ-----ALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLN 255 (727)
T ss_dssp ---------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCT
T ss_pred -------hh-----hHhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEee
Confidence 11 112333333333321 34555666666666666666665 455555566666666666
Q ss_pred CCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCC
Q 004232 175 DNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKL 249 (766)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l 249 (766)
+|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+..++.++.|++|++|+|++|.|
T Consensus 256 ~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 256 GNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp TSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCC
T ss_pred CCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCcc
Confidence 66665 55555666666666666666665 455556656666666665555543322344455544444444433
No 352
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.9e-19 Score=180.94 Aligned_cols=134 Identities=28% Similarity=0.280 Sum_probs=123.9
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|++|+|++|.+.+..|..|.++++|++|+|++|+|.+..+..|..+++|++|+|++|++++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 78999999999999999999999999999999999998766677899999999999999999888888999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN 252 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~ 252 (766)
++|+|+ .+|..+..+++|++|+|++|++++..+. +..+++|+.|++++|.++..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 999999 7899999999999999999999987765 78899999999999988754
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.4e-19 Score=190.20 Aligned_cols=171 Identities=27% Similarity=0.347 Sum_probs=79.1
Q ss_pred cCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 115 ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 115 ~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
..+++|+.|++++|.+... | .+..+++|++|+|++|++++..| +.++++|++|+|++|.+++ +| .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 3444555555555555332 2 24555555555555555543222 5555555555555555543 12 2445555555
Q ss_pred EEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCC
Q 004232 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEI 274 (766)
Q Consensus 195 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~ 274 (766)
|+|++|++++. +.+..+++|+.|+|++|.+++. +.+..+++|++|++++|++++ ..
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~---------------------~~ 172 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISD---------------------IV 172 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC---------------------CG
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcccc---------------------ch
Confidence 55555554432 2344444455555544444432 334444444444444433321 11
Q ss_pred cccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 275 PKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 275 p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
| +..+++|+.|++++|.+++.+ .+..+++|+.|++++|+++
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEE
T ss_pred h--hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCccc
Confidence 1 444555555555555555432 2444555555555555544
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.1e-19 Score=209.53 Aligned_cols=195 Identities=21% Similarity=0.308 Sum_probs=158.4
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEE
Q 004232 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (766)
Q Consensus 117 l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (766)
+..+..++|..+.+...++ +..|.+|+.|+|++|.+.. +| .+..|++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445556677777765544 5788899999999999864 44 58889999999999999987655 88999999999
Q ss_pred ccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcc
Q 004232 197 MRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPK 276 (766)
Q Consensus 197 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~ 276 (766)
|++|++++ +| .+..+++|+.|+|++|.+++ ++.+..+++|+.|+|++|.+++ + .
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~----------------------l-~ 147 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD----------------------I-T 147 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCC----------------------C-G
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCC----------------------c-h
Confidence 99999985 33 68889999999999999986 4678888889988888887753 1 4
Q ss_pred cccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCC
Q 004232 277 QYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLP 347 (766)
Q Consensus 277 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p 347 (766)
.++.+++|+.|+|++|++++.+| +..+++|+.|+|++|+|++. | .+..+.+|+.|+|++|.+++...
T Consensus 148 ~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 148 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECCCC
T ss_pred hhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCCcc
Confidence 57788899999999999998877 88899999999999999864 3 57888999999999999886533
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=8.9e-20 Score=191.77 Aligned_cols=190 Identities=23% Similarity=0.334 Sum_probs=156.2
Q ss_pred CCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEcc
Q 004232 119 SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMR 198 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 198 (766)
++..+.+..+.+.+..+ +..+++|++|++++|.+.. +| .+..+++|++|+|++|++++..| +.++++|++|+|+
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 34445566666655433 5678999999999999975 44 48889999999999999987554 8999999999999
Q ss_pred CccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccc
Q 004232 199 NNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY 278 (766)
Q Consensus 199 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~ 278 (766)
+|++++ + +.+..+++|++|+|++|.+++ ++.+..+++|++|++++|++++ + ..+
T Consensus 99 ~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~-~~~l~~l~~L~~L~l~~n~l~~----------------------~-~~l 152 (291)
T 1h6t_A 99 ENKVKD-L-SSLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD----------------------I-TVL 152 (291)
T ss_dssp SSCCCC-G-GGGTTCTTCCEEECTTSCCCC-CGGGGGCTTCCEEECCSSCCCC----------------------C-GGG
T ss_pred CCcCCC-C-hhhccCCCCCEEECCCCcCCC-ChhhcCCCCCCEEEccCCcCCc----------------------c-hhh
Confidence 999986 3 348899999999999999986 4678888888888888887753 2 457
Q ss_pred cCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCcccc
Q 004232 279 GQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTG 344 (766)
Q Consensus 279 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g 344 (766)
+.+++|+.|++++|++++.++ +..+++|+.|+|++|.+++ +| .+..+++|+.|++++|.++.
T Consensus 153 ~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 153 SRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 788999999999999999876 8899999999999999985 44 37888999999999999875
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=3.3e-19 Score=193.48 Aligned_cols=174 Identities=25% Similarity=0.291 Sum_probs=108.8
Q ss_pred EEecccccccccCCccccCCCCCCEEecccccCccCCCccCC-CCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCc
Q 004232 122 VLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKIS-TMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (766)
Q Consensus 122 ~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (766)
.+++++|++.. +|..+. ..++.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45555555533 444332 2466666666666665555555 6666666666666666666666666666667777666
Q ss_pred cCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccc-
Q 004232 201 KLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQY- 278 (766)
Q Consensus 201 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~- 278 (766)
+|++..+..|..+++|++|+|++|++++..|. +..+++|+.|+|++|++++. .+..|
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l---------------------~~~~~~ 157 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRF---------------------PVELIK 157 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSC---------------------CGGGTC
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCee---------------------CHHHhc
Confidence 66665555666666666666666666655443 56666666666666655431 11122
Q ss_pred --cCCCCCCEEEccCCcCCCCCccccCCCCC--CCeEEeecCcCc
Q 004232 279 --GQLNQLQQLDMSFNALRGMPPPAIFSLPN--ISDLNLASNKFS 319 (766)
Q Consensus 279 --~~l~~L~~L~ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~ 319 (766)
..+++|+.|||++|+|+++++..+..+++ |+.|+|++|.+.
T Consensus 158 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 158 DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 45677778888888887777766666666 367777777775
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.5e-18 Score=174.44 Aligned_cols=150 Identities=23% Similarity=0.327 Sum_probs=81.0
Q ss_pred EEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCc
Q 004232 146 YLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNA 225 (766)
Q Consensus 146 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 225 (766)
.+++++|.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444443 2343332 345555555555554444455555555555555555555555555555555555555555
Q ss_pred cCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCC
Q 004232 226 ISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFS 304 (766)
Q Consensus 226 l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 304 (766)
++...+. +..+++|++|+|++|++++ ..|..|..+++|+.|+|++|++++.++..|..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~---------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINC---------------------LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCE---------------------eCHHHcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 5543333 3445555555554444332 23445555666666666666666666666666
Q ss_pred CCCCCeEEeecCcCc
Q 004232 305 LPNISDLNLASNKFS 319 (766)
Q Consensus 305 l~~L~~L~L~~N~l~ 319 (766)
+++|+.|+|++|.+.
T Consensus 151 l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CCCCCEEEeCCCCcC
Confidence 666666666666654
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=2.4e-18 Score=174.11 Aligned_cols=134 Identities=28% Similarity=0.360 Sum_probs=76.3
Q ss_pred CCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEEC
Q 004232 166 VKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNL 244 (766)
Q Consensus 166 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~l 244 (766)
++|++|+|++|.+++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++|++++..+. +..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 4455555555555544455555555555555555555443334445555555555555555544433 345555555555
Q ss_pred CCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCccc
Q 004232 245 SDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (766)
Q Consensus 245 s~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (766)
++|+++ .+|..+..+++|+.|+|++|+|++.++..+..+++|+.|+|++|.+.+.
T Consensus 120 s~N~l~----------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT----------------------ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC----------------------SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc----------------------ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 555443 2445556666777777777777777666666777777777777776644
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.5e-19 Score=192.45 Aligned_cols=176 Identities=26% Similarity=0.245 Sum_probs=142.5
Q ss_pred CEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccC-CCCCCCEEEccCccCCCCCCccccCCCCCCEEEccC
Q 004232 145 EYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFD-SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSK 223 (766)
Q Consensus 145 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 223 (766)
+.+++++|++. .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 68999999997 4777665 4589999999999988888887 999999999999999988888899999999999999
Q ss_pred CccCCCCCC-CCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCcccc
Q 004232 224 NAISGSLPD-LSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAI 302 (766)
Q Consensus 224 N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~ 302 (766)
|+|++..+. +..+++|++|+|++|+++ +..|..|..+++|+.|+|++|+|+++++..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~---------------------~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIV---------------------VVDRNAFEDMAQLQKLYLSQNQISRFPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCC---------------------EECTTTTTTCTTCCEEECCSSCCCSCCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCccc---------------------EECHHHhCCcccCCEEECCCCcCCeeCHHHh
Confidence 999876664 778888888888777664 3456778889999999999999999887766
Q ss_pred ---CCCCCCCeEEeecCcCcccCCccCCCCCC--ccEEeCcCCcccc
Q 004232 303 ---FSLPNISDLNLASNKFSGSLPKNLNCGGK--LVFFDISNNKLTG 344 (766)
Q Consensus 303 ---~~l~~L~~L~L~~N~l~g~~p~~~~~~~~--L~~L~ls~N~l~g 344 (766)
..+++|+.|+|++|+|++..+..+..+.. ++.|+|++|.+..
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 56888999999999988554455555554 3667787777763
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.2e-18 Score=175.08 Aligned_cols=45 Identities=27% Similarity=0.379 Sum_probs=22.6
Q ss_pred ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcc
Q 004232 276 KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSG 320 (766)
Q Consensus 276 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g 320 (766)
..|..+++|+.|+|++|++++.+|..|..+++|+.|+|++|.+++
T Consensus 123 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 123 DSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred hHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 334444455555555555555544455555555555555555443
No 361
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=5.6e-22 Score=227.24 Aligned_cols=203 Identities=19% Similarity=0.189 Sum_probs=130.6
Q ss_pred cCCCCCCEEecccccccccCCccccCCCCCCEEeccccc-------------CccCCCccCCCCCCCCEEE-ccCCcCCC
Q 004232 115 ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-------------LFGSVPPKISTMVKLQTLI-LDDNFFNN 180 (766)
Q Consensus 115 ~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 180 (766)
..+++|+.|+|++|.+. .+|+.+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 45666666666666663 556666666666666665553 3334444444444454444 333322
Q ss_pred CCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q 004232 181 TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGL 260 (766)
Q Consensus 181 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 260 (766)
.+|..+.+++|.++.. |. ..|+.|+|++|.|++ +|.++.+++|+.|+|++|.|+
T Consensus 423 ---------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l~---------- 476 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR---------- 476 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC----------
T ss_pred ---------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcCccccccCcEeecCccccc----------
Confidence 1233333444444422 11 246777777777776 445667777777776666554
Q ss_pred cEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccC-CccCCCCCCccEEeCcC
Q 004232 261 VMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSL-PKNLNCGGKLVFFDISN 339 (766)
Q Consensus 261 ~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~-p~~~~~~~~L~~L~ls~ 339 (766)
.+|..|+.+++|+.|+|++|+|+++ | .+..+++|+.|+|++|+|++.. |..+..+++|+.|+|++
T Consensus 477 ------------~lp~~~~~l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~ 542 (567)
T 1dce_A 477 ------------ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQG 542 (567)
T ss_dssp ------------CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred ------------ccchhhhcCCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecC
Confidence 4677788888888888888888885 3 6888888888888888888776 88888888888888888
Q ss_pred CccccCCCCCC---CCCCCCceee
Q 004232 340 NKLTGGLPSCL---SNESDKRVVK 360 (766)
Q Consensus 340 N~l~g~~p~~~---~~~~~l~~l~ 360 (766)
|.+++.+|... ..+++|+.|+
T Consensus 543 N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 543 NSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CcCCCCccHHHHHHHHCcccCccC
Confidence 88887655321 2255666664
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.5e-18 Score=172.80 Aligned_cols=133 Identities=22% Similarity=0.258 Sum_probs=124.6
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
++|+.|+|++|.|.+..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999988889999999999999999999988999999999999999999999777777899999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLD 250 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~ 250 (766)
++|++++..|..|..+++|++|+|++|++++..+. +..+++|++|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999999999999999999999999999988775 888999999999999875
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=7.9e-19 Score=173.36 Aligned_cols=107 Identities=20% Similarity=0.249 Sum_probs=56.9
Q ss_pred cCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 115 ARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 115 ~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
+.+++|+.|++++|.+. .+| .+..+++|++|++++|.+. .++.+..+++|++|+|++|.+++..|..|+.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555556666655554 344 3555555555555555442 2234555555555555555555544555555555555
Q ss_pred EEccCccCCCCCCccccCCCCCCEEEccCCc
Q 004232 195 LSMRNNKLAGPFPSSIQRISTLSDLDLSKNA 225 (766)
Q Consensus 195 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 225 (766)
|+|++|++++..|..+..+++|++|+|++|.
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 5555555554445555555555555555554
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=7.6e-19 Score=181.74 Aligned_cols=171 Identities=22% Similarity=0.292 Sum_probs=119.7
Q ss_pred CCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEE
Q 004232 116 RLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFL 195 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 195 (766)
++.++..++++.|.+.+.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++..| +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4566777778888776543 4778888888888888886 355 67778888888888888876544 7788888888
Q ss_pred EccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCc
Q 004232 196 SMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP 275 (766)
Q Consensus 196 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p 275 (766)
+|++|++++ +|.... ++|+.|+|++|++++ ++.+..+++|++|++++|++++ +|
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~----------------------~~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLKS----------------------IV 144 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCCB----------------------CG
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCCC----------------------Ch
Confidence 888888775 333222 777777777777775 3556677777777776666542 22
Q ss_pred ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCccc
Q 004232 276 KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGS 321 (766)
Q Consensus 276 ~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~ 321 (766)
.++.+++|+.|++++|++++. ..+..+++|+.|+|++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 456677777777777777776 4566677777777777777643
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=3.9e-18 Score=171.47 Aligned_cols=133 Identities=23% Similarity=0.237 Sum_probs=122.1
Q ss_pred CCCEEecccccccccCC-ccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 119 SLRVLSLVSLGIWGSLP-DKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
.++.|+|++|.+++..| ..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 46899999999998865 46899999999999999999888889999999999999999999988889999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDS 251 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~ 251 (766)
++|++++..|..|..+++|++|+|++|++++..|. +..+++|++|++++|.+..
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 99999999999999999999999999999988664 8889999999999998765
No 366
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=1.1e-18 Score=179.86 Aligned_cols=138 Identities=13% Similarity=0.140 Sum_probs=104.1
Q ss_pred CCcCCceecCCceeEEEEEe-cCCce--EEEEEccCChh------------------------hhHHHHHHHHHHHHhCC
Q 004232 485 FDMSAIMGEGSYGKLYKGRL-ENGTS--VAIRCLPSSKK------------------------YTVRNLKLRLDLLAKLR 537 (766)
Q Consensus 485 f~~~~~lG~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~------------------------~~~~~~~~e~~~l~~l~ 537 (766)
|++.+.||+|+||.||+|+. .+|+. ||||+++.... .....+.+|+.+|++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 68999 99998754311 11236788999999998
Q ss_pred CCCcccccceeecCCCCCCcCcceEEEEEEccCC-C----ChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCC
Q 004232 538 HPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSN-G----NFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLH-TGVI 611 (766)
Q Consensus 538 Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~-G----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~ 611 (766)
|+++.-...+... ..+|||||+.+ | +|.++... .++.....++.+++.||.||| +.
T Consensus 129 ~~~i~~p~~~~~~----------~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~-- 190 (258)
T 1zth_A 129 EAGVSVPQPYTYM----------KNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA-- 190 (258)
T ss_dssp HTTCCCCCEEEEE----------TTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS--
T ss_pred hCCCCCCeEEEcC----------CCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC--
Confidence 8865222212111 35899999952 5 56554432 123356788999999999999 76
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+|+||||||+|||++. .+||+|||+|...
T Consensus 191 -givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 191 -ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp -CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred -CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 8999999999999998 9999999998653
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.2e-18 Score=168.11 Aligned_cols=154 Identities=19% Similarity=0.305 Sum_probs=120.5
Q ss_pred cccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCC
Q 004232 137 KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTL 216 (766)
Q Consensus 137 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 216 (766)
....+++|++|++++|.+. .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3477888999999999997 566 6889999999999999664 34578889999999999999988788888889999
Q ss_pred CEEEccCCccCCCCC-CCCCCCCCCEEECCCCC-CCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcC
Q 004232 217 SDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNK-LDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNAL 294 (766)
Q Consensus 217 ~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~-l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 294 (766)
++|+|++|.+++..| .+..+++|++|++++|. ++ .+| .+..+++|+.|++++|++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~----------------------~~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT----------------------DIM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC----------------------CCG-GGGGCSSCCEEECTTBCC
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc----------------------ccH-hhcCCCCCCEEECCCCCC
Confidence 999999998887444 37778888888888776 43 233 467778888888888888
Q ss_pred CCCCccccCCCCCCCeEEeecCcCc
Q 004232 295 RGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 295 ~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
++.+ .+..+++|+.|++++|++.
T Consensus 172 ~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCT--TGGGCSSCCEEEECBC---
T ss_pred cChH--HhccCCCCCEEEeeCcccC
Confidence 8755 5677788888888888765
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.1e-18 Score=176.25 Aligned_cols=177 Identities=19% Similarity=0.287 Sum_probs=136.4
Q ss_pred ccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCcccc
Q 004232 132 GSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQ 211 (766)
Q Consensus 132 ~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 211 (766)
..+|+. ++.++..++++.|.+++ ++ .+..+++|++|++++|.++. +| .+..+++|++|+|++|++++..| +.
T Consensus 11 ~~~pd~--~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~ 82 (263)
T 1xeu_A 11 QVFPDP--GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LK 82 (263)
T ss_dssp HHCCSH--HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GT
T ss_pred HhCCCH--HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hc
Confidence 344543 56677888888888864 33 57788888888888888874 45 67788888888888888886444 88
Q ss_pred CCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccC
Q 004232 212 RISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSF 291 (766)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~ 291 (766)
.+++|++|+|++|++++ +|.+.. ++|++|++++|+++ + +| .++.+++|+.|++++
T Consensus 83 ~l~~L~~L~L~~N~l~~-l~~~~~-~~L~~L~L~~N~l~---------------------~-~~-~l~~l~~L~~L~Ls~ 137 (263)
T 1xeu_A 83 DLTKLEELSVNRNRLKN-LNGIPS-ACLSRLFLDNNELR---------------------D-TD-SLIHLKNLEILSIRN 137 (263)
T ss_dssp TCSSCCEEECCSSCCSC-CTTCCC-SSCCEEECCSSCCS---------------------B-SG-GGTTCTTCCEEECTT
T ss_pred cCCCCCEEECCCCccCC-cCcccc-CcccEEEccCCccC---------------------C-Ch-hhcCcccccEEECCC
Confidence 88888888888888876 344433 66777766666554 2 23 478899999999999
Q ss_pred CcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccC
Q 004232 292 NALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGG 345 (766)
Q Consensus 292 N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~ 345 (766)
|++++.+ .+..+++|+.|+|++|++++. ..+..+.+|+.|++++|.+++.
T Consensus 138 N~i~~~~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 138 NKLKSIV--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp SCCCBCG--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CcCCCCh--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 9999874 588899999999999999876 6678888999999999998855
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=8.8e-19 Score=206.91 Aligned_cols=219 Identities=17% Similarity=0.065 Sum_probs=119.7
Q ss_pred CCCCEEecccccccccCCccccCCCCCC-----EEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLE-----YLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~-----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
+.++.|+|..|.+... |..+.....|. .++++.|++. ..|..+..+.+|+.|+|++|.+. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCcc-hhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 4578888888888663 44332222222 2333444443 56788999999999999999998 678777799999
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcC
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSF 270 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l 270 (766)
++|+|++|+|+ .+|..|++|++|++|+|++|.|+..++.++.|++|++|+|++|.|+.....+ ..+|+.|+|++|.|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCC
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCcc
Confidence 99999999999 8999999999999999999999955456899999999999999997433333 35789999999999
Q ss_pred ccCCcccccCCCC-CCEEEccCCcCCCCCccccCCCCCCCeEEeecC--------cCcccCCccCCCCCCccEEeCcCCc
Q 004232 271 SGEIPKQYGQLNQ-LQQLDMSFNALRGMPPPAIFSLPNISDLNLASN--------KFSGSLPKNLNCGGKLVFFDISNNK 341 (766)
Q Consensus 271 ~~~~p~~~~~l~~-L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N--------~l~g~~p~~~~~~~~L~~L~ls~N~ 341 (766)
++.+|..+..+.. +..|+|++|.+++.+|. .|..|++++| .|.+..+..+..+..+....+++|.
T Consensus 329 ~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Ni 402 (727)
T 4b8c_D 329 EKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNT 402 (727)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----------------------------------------C
T ss_pred CCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeeccc
Confidence 9999988866532 23478999999998885 4556677776 3444444445566667778888888
Q ss_pred cccCC
Q 004232 342 LTGGL 346 (766)
Q Consensus 342 l~g~~ 346 (766)
+.+..
T Consensus 403 l~~~~ 407 (727)
T 4b8c_D 403 LCQHY 407 (727)
T ss_dssp CCGGG
T ss_pred ccccc
Confidence 76443
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.70 E-value=5.2e-19 Score=202.58 Aligned_cols=172 Identities=19% Similarity=0.227 Sum_probs=107.8
Q ss_pred CCCcccCCcccccccCCCCCCEEeccccc-------------ccccCCccccCCCCCCEEe-cccccCccCCCc------
Q 004232 101 LSENFSIDSFVTTLARLTSLRVLSLVSLG-------------IWGSLPDKIHRLYSLEYLD-LSSNFLFGSVPP------ 160 (766)
Q Consensus 101 l~~n~~~~~~~~~l~~l~~L~~L~L~~n~-------------l~~~~p~~~~~L~~L~~L~-Ls~N~l~~~~p~------ 160 (766)
++.|.+ ..+|+++++|++|+.|++++|. +.+.+|..+++|++|+.|+ ++.|.+.. ++.
T Consensus 356 Ls~n~L-~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~-L~~l~l~~n 433 (567)
T 1dce_A 356 LSVEKS-TVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD-LRSKFLLEN 433 (567)
T ss_dssp CCHHHH-HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH-HHHHHHHHH
T ss_pred CChhhH-HhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch-hhhhhhhcc
Confidence 444433 4789999999999999998775 6788889999999999999 66664421 110
Q ss_pred cCCC--CCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCC
Q 004232 161 KIST--MVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGS 238 (766)
Q Consensus 161 ~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~ 238 (766)
.+.. ...|+.|+|++|.+++ +|. |+++++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +|.++.+++
T Consensus 434 ~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~ 509 (567)
T 1dce_A 434 SVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPR 509 (567)
T ss_dssp HHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSS
T ss_pred cccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCC
Confidence 0000 0135666666666664 454 666666666666666666 556666666666666666666665 345555555
Q ss_pred CCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCC-cccccCCCCCCEEEccCCcCCCCCc
Q 004232 239 LNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEI-PKQYGQLNQLQQLDMSFNALRGMPP 299 (766)
Q Consensus 239 L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~~ 299 (766)
|++|+|++|++++ .. |..|+.+++|+.|+|++|.+++.+|
T Consensus 510 L~~L~Ls~N~l~~---------------------~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 510 LQELLLCNNRLQQ---------------------SAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCEEECCSSCCCS---------------------SSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CcEEECCCCCCCC---------------------CCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 5555555544432 22 5556666666666666666666554
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.2e-16 Score=157.01 Aligned_cols=129 Identities=25% Similarity=0.300 Sum_probs=99.4
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCc-cCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccC
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPP-KISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (766)
+.+++++|++ +.+|..+.. +|++|+|++|++++..+. .|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 5677777777 456665543 788888888888765554 377888888888888888887788888888888888888
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCC
Q 004232 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSN 252 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~ 252 (766)
|+|++..|..|..+++|++|+|++|++++.+|. +..+++|++|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 888877777788888888888888888877664 67788888888888777653
No 372
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=5e-17 Score=155.94 Aligned_cols=134 Identities=22% Similarity=0.263 Sum_probs=120.9
Q ss_pred CCCCCCEEeccccccc-ccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 116 RLTSLRVLSLVSLGIW-GSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~-~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
..++|+.|+|++|.+. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4478999999999998 78999999999999999999999865 78999999999999999999888998989999999
Q ss_pred EEccCccCCCCC-CccccCCCCCCEEEccCCccCCCCC----CCCCCCCCCEEECCCCCCCC
Q 004232 195 LSMRNNKLAGPF-PSSIQRISTLSDLDLSKNAISGSLP----DLSSLGSLNVLNLSDNKLDS 251 (766)
Q Consensus 195 L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~ls~N~l~~ 251 (766)
|+|++|++++.. +..+..+++|+.|+|++|.+++..+ .+..+++|++|++++|.+..
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 999999998642 2789999999999999999998777 58899999999999998754
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=2.5e-17 Score=161.85 Aligned_cols=113 Identities=24% Similarity=0.286 Sum_probs=107.1
Q ss_pred CCCEEecccccccccCCc-cccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEc
Q 004232 119 SLRVLSLVSLGIWGSLPD-KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSM 197 (766)
Q Consensus 119 ~L~~L~L~~n~l~~~~p~-~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 197 (766)
+|++|+|++|.+.+..|. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 899999999999887775 5999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCCCCCCccccCCCCCCEEEccCCccCCCCC
Q 004232 198 RNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP 231 (766)
Q Consensus 198 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 231 (766)
++|++++.+|..|..+++|++|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999999999999999999999999999997655
No 374
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.67 E-value=2.5e-19 Score=207.68 Aligned_cols=130 Identities=14% Similarity=0.116 Sum_probs=70.1
Q ss_pred ccCCCCCCEEeccccccccc----CCccccCCCCCCEEecccccCc----cCCCccCCCCCCCCEEEccCCcCCCCCCcc
Q 004232 114 LARLTSLRVLSLVSLGIWGS----LPDKIHRLYSLEYLDLSSNFLF----GSVPPKISTMVKLQTLILDDNFFNNTIPNW 185 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~----~p~~~~~L~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 185 (766)
..++++|++|+|++|.+.+. ++..+.++++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..
T Consensus 160 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~ 238 (592)
T 3ogk_B 160 VTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGF 238 (592)
T ss_dssp HHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHH
T ss_pred HhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHH
Confidence 34667777777777766554 3334556666666777666665 2233444556666666666665543 2333
Q ss_pred cC---------------------------CCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC-C-CCCC
Q 004232 186 FD---------------------------SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-D-LSSL 236 (766)
Q Consensus 186 ~~---------------------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~-~~~l 236 (766)
+. .+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... . +..+
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~ 317 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKC 317 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTC
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhC
Confidence 33 33333334333322 23455556666777777777776543221 1 2444
Q ss_pred CCCCEEECC
Q 004232 237 GSLNVLNLS 245 (766)
Q Consensus 237 ~~L~~L~ls 245 (766)
++|++|+++
T Consensus 318 ~~L~~L~L~ 326 (592)
T 3ogk_B 318 PNLEVLETR 326 (592)
T ss_dssp TTCCEEEEE
T ss_pred cCCCEEecc
Confidence 445555444
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.2e-16 Score=151.33 Aligned_cols=108 Identities=21% Similarity=0.253 Sum_probs=82.5
Q ss_pred CCCCCCEEecccccCc-cCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCE
Q 004232 140 RLYSLEYLDLSSNFLF-GSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSD 218 (766)
Q Consensus 140 ~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 218 (766)
..++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3477899999999987 67888888888999999999988865 67888888888888888888777777777888888
Q ss_pred EEccCCccCCCC--CCCCCCCCCCEEECCCCCC
Q 004232 219 LDLSKNAISGSL--PDLSSLGSLNVLNLSDNKL 249 (766)
Q Consensus 219 L~Ls~N~l~~~~--p~~~~l~~L~~L~ls~N~l 249 (766)
|+|++|.+++.. +.+..+++|++|++++|.+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 888888877643 3355555555555554443
No 376
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=6.2e-17 Score=151.93 Aligned_cols=129 Identities=22% Similarity=0.247 Sum_probs=116.4
Q ss_pred CCCCCCEEeccccccc-ccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCE
Q 004232 116 RLTSLRVLSLVSLGIW-GSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTF 194 (766)
Q Consensus 116 ~l~~L~~L~L~~n~l~-~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 194 (766)
..++|+.|++++|.+. +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|.+++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 88999999999999999999999865 78999999999999999999889999989999999
Q ss_pred EEccCccCCCC-CCccccCCCCCCEEEccCCccCCCCC----CCCCCCCCCEEECCC
Q 004232 195 LSMRNNKLAGP-FPSSIQRISTLSDLDLSKNAISGSLP----DLSSLGSLNVLNLSD 246 (766)
Q Consensus 195 L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~l~~L~~L~ls~ 246 (766)
|++++|++++. .|..+..+++|++|++++|.+++..+ .+..+++|++|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999874 45889999999999999999998776 378899999998864
No 377
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.63 E-value=3.4e-18 Score=198.18 Aligned_cols=265 Identities=11% Similarity=0.013 Sum_probs=189.1
Q ss_pred CCcccCCcccccccCC--CCCCEEeccccc-cc-ccCCccccCCCCCCEEecccccCccC----CCccCCCCCCCCEEEc
Q 004232 102 SENFSIDSFVTTLARL--TSLRVLSLVSLG-IW-GSLPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLIL 173 (766)
Q Consensus 102 ~~n~~~~~~~~~l~~l--~~L~~L~L~~n~-l~-~~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L 173 (766)
+.+...+..+..++.+ .+|++|+|++|. +. ..++..+.++++|++|+|++|.+++. ++..+.++++|++|+|
T Consensus 120 ~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L 199 (592)
T 3ogk_B 120 RRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNF 199 (592)
T ss_dssp ESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEEC
T ss_pred eccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEe
Confidence 3343334444556553 459999999886 21 12334455899999999999998765 4445678899999999
Q ss_pred cCCcCCC----CCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCC----CCCCCCCCCCCCEEECC
Q 004232 174 DDNFFNN----TIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISG----SLPDLSSLGSLNVLNLS 245 (766)
Q Consensus 174 ~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~l~~L~~L~ls 245 (766)
++|.+++ .++..+.++++|++|+|++|.+.+ +|..+..+++|+.|+++.+.... ....+..+++|+.|+++
T Consensus 200 ~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~ 278 (592)
T 3ogk_B 200 YMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLS 278 (592)
T ss_dssp TTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEET
T ss_pred eccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcc
Confidence 9999983 455567789999999999999986 77889999999999998643321 11246778899999998
Q ss_pred CCCCCCCCCCC---CCCCcEEEccCCcCccCCc-ccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEee-------
Q 004232 246 DNKLDSNLPKL---PRGLVMAFLSNNSFSGEIP-KQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLA------- 314 (766)
Q Consensus 246 ~N~l~~~~p~~---~~~l~~l~ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~------- 314 (766)
++.. +.+|.. ..+|+.|++++|.+++... ..+..+++|+.|+++++...+.++..+..+++|+.|+|+
T Consensus 279 ~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~ 357 (592)
T 3ogk_B 279 YMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQG 357 (592)
T ss_dssp TCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSST
T ss_pred ccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccc
Confidence 8632 334433 3478999999999876543 456889999999998443333344444567889999999
Q ss_pred ----cCcCccc-CCccCCCCCCccEEeCcCCccccCCCCCCCC-CCCCceeecC----CCcCCC
Q 004232 315 ----SNKFSGS-LPKNLNCGGKLVFFDISNNKLTGGLPSCLSN-ESDKRVVKFR----GNCLSS 368 (766)
Q Consensus 315 ----~N~l~g~-~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~-~~~l~~l~l~----~N~l~~ 368 (766)
.|.+++. ++.....+++|+.|+++.|++++..+..+.. +++|+.|++. .|.+++
T Consensus 358 ~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 358 MEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred cccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 3666543 2222345788999999888888766655554 7788888885 556654
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=3.5e-15 Score=144.33 Aligned_cols=132 Identities=26% Similarity=0.294 Sum_probs=99.6
Q ss_pred CCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccC
Q 004232 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (766)
.+.+++++|++.. +|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4567777777743 45433 36788888888888766666678888888888888888877667778888888888888
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCCCCCC
Q 004232 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLDSNLP 254 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~~~~p 254 (766)
|++++..+..+..+++|++|+|++|.+++.++. +..+++|++|++++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888876666778888888888888888866655 4678888888888887766443
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=3.4e-15 Score=146.61 Aligned_cols=126 Identities=25% Similarity=0.284 Sum_probs=88.6
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCc
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (766)
+++++++|++. .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35666666664 4554432 46777777777775 56677777777777777777777766677777777777777777
Q ss_pred cCCCCCCccccCCCCCCEEEccCCccCCCCCC-CCCCCCCCEEECCCCCCC
Q 004232 201 KLAGPFPSSIQRISTLSDLDLSKNAISGSLPD-LSSLGSLNVLNLSDNKLD 250 (766)
Q Consensus 201 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~l~~L~~L~ls~N~l~ 250 (766)
+|++..|..|..+++|++|+|++|.+++..+. +..+++|+.|++++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 77776666777777777777777777765554 666777777777777664
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=6.8e-16 Score=144.77 Aligned_cols=129 Identities=20% Similarity=0.185 Sum_probs=111.7
Q ss_pred CCCCCCEEecccccCc-cCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCE
Q 004232 140 RLYSLEYLDLSSNFLF-GSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSD 218 (766)
Q Consensus 140 ~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 218 (766)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|++++.+|..+..+++|++
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78999999999999999999999976 78999999999999999999888988888999999
Q ss_pred EEccCCccCCCC--CCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCc---ccccCCCCCCEEEccC
Q 004232 219 LDLSKNAISGSL--PDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP---KQYGQLNQLQQLDMSF 291 (766)
Q Consensus 219 L~Ls~N~l~~~~--p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p---~~~~~l~~L~~L~ls~ 291 (766)
|++++|.+++.. +.+..+++|++|++++|.+++ ..+ ..++.+++|+.||+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~---------------------~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN---------------------LNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG---------------------STTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc---------------------hHHHHHHHHHHCCCcccccCCC
Confidence 999999998743 568889999999888877653 333 4678888999988864
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=7.1e-15 Score=144.30 Aligned_cols=128 Identities=18% Similarity=0.285 Sum_probs=109.6
Q ss_pred CEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 240 NVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 240 ~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
+++++++|.++..+..++..++.|++++|+++ .+|..|..+++|+.|+|++|+++++++..|.++++|+.|+|++|+|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~ 91 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLR 91 (193)
T ss_dssp TEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccC
Confidence 45666666665444445566777777777776 67889999999999999999999999999999999999999999999
Q ss_pred ccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 320 GSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 320 g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+..|..|..+++|+.|+|++|++++..+..+..+++|+.+++++|.+.+
T Consensus 92 ~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 92 CIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp BCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8888899999999999999999997777788999999999999998874
No 382
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1.6e-15 Score=162.27 Aligned_cols=193 Identities=13% Similarity=0.134 Sum_probs=115.3
Q ss_pred CCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccC---CCCC--CCCCCCCC
Q 004232 165 MVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAIS---GSLP--DLSSLGSL 239 (766)
Q Consensus 165 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p--~~~~l~~L 239 (766)
+++|+.|+|.+ .++..-+.+|.++++|+.|++.+|.++...+..|..+.++..+.+..+... ..+. .+.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 565555556666666666666666666555556666555555554442210 0000 12222222
Q ss_pred C--------------------------EEECCCCCCCCCCC---CCCCCCcEEEccCCcCccCCcccccCCCCCCEEEcc
Q 004232 240 N--------------------------VLNLSDNKLDSNLP---KLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMS 290 (766)
Q Consensus 240 ~--------------------------~L~ls~N~l~~~~p---~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls 290 (766)
+ .+.+.++-....+. ....+|+.++|++|+++...+..|.++++|+.|+|+
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 2 22222211000000 013456777777777776666677777788888887
Q ss_pred CCcCCCCCccccCCCCCCC-eEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceee
Q 004232 291 FNALRGMPPPAIFSLPNIS-DLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVK 360 (766)
Q Consensus 291 ~N~l~~~~~~~~~~l~~L~-~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~ 360 (766)
+| ++.+.+..|.++++|+ .+++.+ +++..-+..|..+.+|+.+++++|+++...+..|.++++|+.+.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 77 7777777777777787 777777 56645556777777788888877777766666777777777665
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=1.2e-14 Score=140.40 Aligned_cols=129 Identities=16% Similarity=0.168 Sum_probs=102.7
Q ss_pred CEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 240 NVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 240 ~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
+.+++++|.++.....++..++.+++++|++++..+..|+.+++|++|++++|++++.++..+..+++|+.|+|++|+++
T Consensus 10 ~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 89 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ 89 (177)
T ss_dssp TEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCcc
Confidence 45555555555444445556666677777777666667888899999999999999888888889999999999999999
Q ss_pred ccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCCcCCC
Q 004232 320 GSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGNCLSS 368 (766)
Q Consensus 320 g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N~l~~ 368 (766)
+..+..+..+.+|+.|++++|++++..+..+..+++|+.+++++|.+.+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 90 SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 7777778888999999999999987666667888899999999998875
No 384
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=3.4e-15 Score=160.09 Aligned_cols=145 Identities=12% Similarity=0.125 Sum_probs=96.9
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCChh--------------hhHHHHHHHHHHHHhCCCCCcccccceee
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKK--------------YTVRNLKLRLDLLAKLRHPHLVCLLGHCI 549 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--------------~~~~~~~~e~~~l~~l~Hpniv~l~g~~~ 549 (766)
-|++.+.||+|+||.||+|...+|+.||||+++.... ........++++.+...|+|+++++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999999999999988999999998753210 00112222223333333444444432211
Q ss_pred cCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCC
Q 004232 550 DGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEH 629 (766)
Q Consensus 550 ~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~ 629 (766)
... .+ +.....+|||||+++++|.++... .....++.|++.+|.|||+. +||||||||.|||++++
T Consensus 176 ~vp-~p-~~~~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVP-EP-IAQSRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCC-CE-EEEETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCC-ee-eeccCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 100 00 000123799999999998765421 12345788999999999997 89999999999999877
Q ss_pred C----------cEEEecCCCCcc
Q 004232 630 R----------IAKLSDYGLSIV 642 (766)
Q Consensus 630 ~----------~~kl~DFGla~~ 642 (766)
+ .+.|.||+-+..
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCcccccccccceEEEEeCCccc
Confidence 6 388999997643
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=2.6e-15 Score=145.16 Aligned_cols=133 Identities=20% Similarity=0.252 Sum_probs=113.5
Q ss_pred cccCCCCCCEEecccccccccCCccccCCC-CCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLY-SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPS 191 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 191 (766)
.+.++.+|+.|+|++|.+.. +|. +..+. +|++|+|++|.+++. +.|..+++|++|+|++|.+++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46788999999999999985 465 55555 999999999999875 68999999999999999999776666799999
Q ss_pred CCEEEccCccCCCCCCc--cccCCCCCCEEEccCCccCCCCCC----CCCCCCCCEEECCCCCCC
Q 004232 192 LTFLSMRNNKLAGPFPS--SIQRISTLSDLDLSKNAISGSLPD----LSSLGSLNVLNLSDNKLD 250 (766)
Q Consensus 192 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~l~~L~~L~ls~N~l~ 250 (766)
|++|+|++|+++ .+|. .+..+++|+.|++++|.++...+. +..+++|++|++++|.+.
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999999996 5666 789999999999999999865443 778999999999988653
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.53 E-value=2.3e-17 Score=162.98 Aligned_cols=129 Identities=25% Similarity=0.303 Sum_probs=78.0
Q ss_pred ccCCCCCCEEecccccccccCCc------cccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccC
Q 004232 114 LARLTSLRVLSLVSLGIWGSLPD------KIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFD 187 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~l~~~~p~------~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 187 (766)
+.....++.++++.+.+.|.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 55566777777777777777776 67777777777777777764 55 6666666666666666666 4555555
Q ss_pred CCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC--CCCCCCCCCEEECCCC
Q 004232 188 SLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDN 247 (766)
Q Consensus 188 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~ls~N 247 (766)
.+++|++|+|++|++++ +| .+..+++|++|+|++|.+++..+ .+..+++|++|++++|
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N 150 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGN 150 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSC
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCC
Confidence 55666666666666654 33 45555566666666655553221 2334444444444433
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=8.5e-15 Score=141.50 Aligned_cols=109 Identities=21% Similarity=0.203 Sum_probs=68.6
Q ss_pred cccCCCCCCEEecccccCccCCCccCCCCC-CCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCC
Q 004232 137 KIHRLYSLEYLDLSSNFLFGSVPPKISTMV-KLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIST 215 (766)
Q Consensus 137 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 215 (766)
.+.++.+|++|+|++|.++. +|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|++++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46677788888888888863 443 44444 777777777777754 56677777777777777777544444466677
Q ss_pred CCEEEccCCccCCCCC--CCCCCCCCCEEECCCCCC
Q 004232 216 LSDLDLSKNAISGSLP--DLSSLGSLNVLNLSDNKL 249 (766)
Q Consensus 216 L~~L~Ls~N~l~~~~p--~~~~l~~L~~L~ls~N~l 249 (766)
|++|+|++|.++...+ .+..+++|++|++++|.+
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCC
Confidence 7777777666643222 244444455544444433
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=4.7e-17 Score=160.67 Aligned_cols=154 Identities=25% Similarity=0.319 Sum_probs=104.4
Q ss_pred ccCCCCCCEEecccccCccCCCc------cCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCcccc
Q 004232 138 IHRLYSLEYLDLSSNFLFGSVPP------KISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQ 211 (766)
Q Consensus 138 ~~~L~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 211 (766)
+....+++.++++.|.++|.+|. .+..+++|++|+|++|.+++ +| .+.++++|++|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45556677777777777776665 67777777777777777775 55 6777777777777777776 5666666
Q ss_pred CCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCc--ccccCCCCCCEEEc
Q 004232 212 RISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIP--KQYGQLNQLQQLDM 289 (766)
Q Consensus 212 ~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p--~~~~~l~~L~~L~l 289 (766)
.+++|++|+|++|++++ +|.+..+++|++|++++|++++ +| ..+..+++|++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~----------------------~~~~~~l~~l~~L~~L~l 147 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITN----------------------WGEIDKLAALDKLEDLLL 147 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCC----------------------HHHHHHHTTTTTCSEEEE
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCc----------------------hhHHHHHhcCCCCCEEEe
Confidence 66777777777777775 4456666777777776665542 11 35666777777777
Q ss_pred cCCcCCCCCccc----------cCCCCCCCeEEeecCcCc
Q 004232 290 SFNALRGMPPPA----------IFSLPNISDLNLASNKFS 319 (766)
Q Consensus 290 s~N~l~~~~~~~----------~~~l~~L~~L~L~~N~l~ 319 (766)
++|.+++.+|.. +..+++|+.|| +|.++
T Consensus 148 ~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 148 AGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp CSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred cCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 777776665532 56667777665 55554
No 389
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=2.7e-16 Score=182.15 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=15.3
Q ss_pred CCCCCEEEccCCcCCCCCccccC-CCCCCCeEEee
Q 004232 281 LNQLQQLDMSFNALRGMPPPAIF-SLPNISDLNLA 314 (766)
Q Consensus 281 l~~L~~L~ls~N~l~~~~~~~~~-~l~~L~~L~L~ 314 (766)
+++|+.|+++.|.+++.....+. .+++|+.|+|+
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 44455554444444433332332 24455555555
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=8.7e-14 Score=133.54 Aligned_cols=107 Identities=21% Similarity=0.233 Sum_probs=62.2
Q ss_pred CCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccC
Q 004232 120 LRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRN 199 (766)
Q Consensus 120 L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 199 (766)
.+.|++++|++.. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3456666666643 444432 5566666666666655555566666666666666666655555556666666666666
Q ss_pred ccCCCCCCccccCCCCCCEEEccCCccCCC
Q 004232 200 NKLAGPFPSSIQRISTLSDLDLSKNAISGS 229 (766)
Q Consensus 200 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 229 (766)
|+|++..+..|..+++|++|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 666654444555556666666666555543
No 391
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=4.6e-14 Score=150.87 Aligned_cols=218 Identities=13% Similarity=0.084 Sum_probs=157.9
Q ss_pred CCCCCEEeccccccc--------------------ccCCccccC--------CCCCCEEecccccCccCCCccCCCCCCC
Q 004232 117 LTSLRVLSLVSLGIW--------------------GSLPDKIHR--------LYSLEYLDLSSNFLFGSVPPKISTMVKL 168 (766)
Q Consensus 117 l~~L~~L~L~~n~l~--------------------~~~p~~~~~--------L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 168 (766)
+++|+.|||++|.+. ..-+..|.+ +++|+.|+|.+ +++..-+..|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999987 222346778 99999999998 8887777889999999
Q ss_pred CEEEccCCcCCCCCCcccCCCCCCCEEEccCccC----CCCCCccccCCCCCC-EEEccCCc------------------
Q 004232 169 QTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKL----AGPFPSSIQRISTLS-DLDLSKNA------------------ 225 (766)
Q Consensus 169 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~~~~l~~L~-~L~Ls~N~------------------ 225 (766)
+.|+|++|.+....+..|.++.++..+.+..+.. ...-+..|.++..|+ .+++....
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999999888888999988888887766322 222223344444444 22222110
Q ss_pred --cCCCCC-----CC-CCCCCCCEEECCCCCCCCCCCCCC---CCCcEEEccCCcCccCCcccccCCCCCC-EEEccCCc
Q 004232 226 --ISGSLP-----DL-SSLGSLNVLNLSDNKLDSNLPKLP---RGLVMAFLSNNSFSGEIPKQYGQLNQLQ-QLDMSFNA 293 (766)
Q Consensus 226 --l~~~~p-----~~-~~l~~L~~L~ls~N~l~~~~p~~~---~~l~~l~ls~N~l~~~~p~~~~~l~~L~-~L~ls~N~ 293 (766)
+.+.+. .+ ..+++|+.|+|++|+++...+..+ .+|+.++|.+| ++..-+..|.++++|+ .|++.+ +
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 000000 00 125677777777776654433332 35677777776 6656677899999999 999998 8
Q ss_pred CCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeC
Q 004232 294 LRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDI 337 (766)
Q Consensus 294 l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~l 337 (766)
++.+.+..|.+|++|+.|++++|+++..-+..|..+.+|+.++.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 88888899999999999999999999777778999999998863
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.48 E-value=1e-16 Score=185.71 Aligned_cols=252 Identities=14% Similarity=0.087 Sum_probs=143.2
Q ss_pred ccCCCCCCEEeccccc--ccc-cCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCc-------------
Q 004232 114 LARLTSLRVLSLVSLG--IWG-SLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF------------- 177 (766)
Q Consensus 114 l~~l~~L~~L~L~~n~--l~~-~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~------------- 177 (766)
...+++|+.|+|++|. +.. .++..+.++++|++|+|++|...+.+|..+..+++|++|+++.+.
T Consensus 180 ~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~ 259 (594)
T 2p1m_B 180 PDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV 259 (594)
T ss_dssp CTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH
T ss_pred hhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHH
Confidence 3466677777777765 211 112223445777777777762222255555566666666544331
Q ss_pred -------------CC----CCCCcccCCCCCCCEEEccCccCCCCCC-ccccCCCCCCEEEccCCccCC-CCCCC-CCCC
Q 004232 178 -------------FN----NTIPNWFDSLPSLTFLSMRNNKLAGPFP-SSIQRISTLSDLDLSKNAISG-SLPDL-SSLG 237 (766)
Q Consensus 178 -------------l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~-~~p~~-~~l~ 237 (766)
+. ..+|..+..+++|++|+|++|.+++... ..+..+++|+.|++++| ++. .++.+ ..++
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~ 338 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCK 338 (594)
T ss_dssp HHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCT
T ss_pred HHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCC
Confidence 11 1233344467888888888888664322 23457788888888877 321 12222 2467
Q ss_pred CCCEEECCC---------CCCCCCC----CCCCCCCcEEEccCCcCccCCccccc-CCCCCCEEEcc--C----CcCCCC
Q 004232 238 SLNVLNLSD---------NKLDSNL----PKLPRGLVMAFLSNNSFSGEIPKQYG-QLNQLQQLDMS--F----NALRGM 297 (766)
Q Consensus 238 ~L~~L~ls~---------N~l~~~~----p~~~~~l~~l~ls~N~l~~~~p~~~~-~l~~L~~L~ls--~----N~l~~~ 297 (766)
+|++|++++ |.+++.. .....+|+.+.++.|.+++..+..+. .+++|+.|+++ + |.++..
T Consensus 339 ~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~ 418 (594)
T 2p1m_B 339 DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE 418 (594)
T ss_dssp TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC
T ss_pred CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC
Confidence 788887733 3333210 01124567777777777765555554 47778888877 3 555543
Q ss_pred Ccc-----ccCCCCCCCeEEeecCcCcccCCccCCC-CCCccEEeCcCCccccCCCCCC-CCCCCCceeecCCCcCC
Q 004232 298 PPP-----AIFSLPNISDLNLASNKFSGSLPKNLNC-GGKLVFFDISNNKLTGGLPSCL-SNESDKRVVKFRGNCLS 367 (766)
Q Consensus 298 ~~~-----~~~~l~~L~~L~L~~N~l~g~~p~~~~~-~~~L~~L~ls~N~l~g~~p~~~-~~~~~l~~l~l~~N~l~ 367 (766)
+.. .+..+++|+.|+|++ .+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.++
T Consensus 419 ~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 419 PLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp CTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred chhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 321 244567777777766 555443333433 5667777777777765433333 34566777777777663
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.9e-13 Score=131.64 Aligned_cols=106 Identities=22% Similarity=0.289 Sum_probs=61.9
Q ss_pred CEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCc
Q 004232 121 RVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNN 200 (766)
Q Consensus 121 ~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 200 (766)
+.+++++|++ +.+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4556666665 34554443 56666666666666555666666666666666666666554445566666666666666
Q ss_pred cCCCCCCccccCCCCCCEEEccCCccCCC
Q 004232 201 KLAGPFPSSIQRISTLSDLDLSKNAISGS 229 (766)
Q Consensus 201 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 229 (766)
+|++..+..|..+++|++|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 66644444455566666666666655543
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2.9e-13 Score=129.85 Aligned_cols=107 Identities=21% Similarity=0.264 Sum_probs=70.4
Q ss_pred CCEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcC
Q 004232 239 LNVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKF 318 (766)
Q Consensus 239 L~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 318 (766)
.+.+++++|.++..+..++..++.|+|++|+|++..|..|+.+++|++|+|++|+|+++++..|..+++|++|+|++|+|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 34556666655543334445555666666666666666777777777777777777777776667777777777777777
Q ss_pred cccCCccCCCCCCccEEeCcCCccccC
Q 004232 319 SGSLPKNLNCGGKLVFFDISNNKLTGG 345 (766)
Q Consensus 319 ~g~~p~~~~~~~~L~~L~ls~N~l~g~ 345 (766)
++..+..+..+.+|+.|+|++|.+++.
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 765555666677777777777766643
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=7.5e-13 Score=127.45 Aligned_cols=104 Identities=22% Similarity=0.289 Sum_probs=57.5
Q ss_pred CEEECCCCCCCCCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 240 NVLNLSDNKLDSNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 240 ~~L~ls~N~l~~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
+.+++++|+++..++.++..++.|+|++|+|++..|..|+.+++|++|+|++|+|+++++..|..+++|+.|+|++|+|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~ 94 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK 94 (174)
T ss_dssp SEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cEEEeCCCCCCccCCCcCCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccc
Confidence 44555555554333333444445555555555555555666666666666666666665555555666666666666665
Q ss_pred ccCCccCCCCCCccEEeCcCCccc
Q 004232 320 GSLPKNLNCGGKLVFFDISNNKLT 343 (766)
Q Consensus 320 g~~p~~~~~~~~L~~L~ls~N~l~ 343 (766)
+..+..+..+++|+.|+|++|.+.
T Consensus 95 ~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 95 SIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCBC
T ss_pred eeCHHHhccccCCCEEEeCCCCcc
Confidence 443434555555555555555554
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.38 E-value=1.5e-11 Score=134.51 Aligned_cols=239 Identities=12% Similarity=0.114 Sum_probs=148.8
Q ss_pred CCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEE
Q 004232 117 LTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLS 196 (766)
Q Consensus 117 l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 196 (766)
+..++.+.+.+ .+..+-+.+|.+. +|+.++|..| +...-..+|.++ +|+.+.|.+ .+...-+..|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35555555543 3444444556654 5777776655 544444555553 577777664 45545556667777777777
Q ss_pred ccCccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCCC--CCCCcEEEccCCcCccC
Q 004232 197 MRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKL--PRGLVMAFLSNNSFSGE 273 (766)
Q Consensus 197 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~--~~~l~~l~ls~N~l~~~ 273 (766)
|.+|+++......|. .++|+.+.|..| ++.... .|.++++|+.+++..| ++..-... ..+|+.+.+ .|.++..
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNI 262 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEE
Confidence 777666643334444 466777776643 332211 2566667777776654 22111111 135666666 3445555
Q ss_pred CcccccCCCCCCEEEccCCcCC-----CCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCC
Q 004232 274 IPKQYGQLNQLQQLDMSFNALR-----GMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPS 348 (766)
Q Consensus 274 ~p~~~~~l~~L~~L~ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~ 348 (766)
-+..|.++++|+.+++.+|.+. .+.+..|.+|++|+.++|. |.++..-...|..+.+|+.++|.+| ++..-+.
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 5677888888888888887765 4666778888888888888 4466444567777888888888655 6655566
Q ss_pred CCCCCCCCceeecCCCcCC
Q 004232 349 CLSNESDKRVVKFRGNCLS 367 (766)
Q Consensus 349 ~~~~~~~l~~l~l~~N~l~ 367 (766)
.+.++ +|+.+.+.+|.+.
T Consensus 341 aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp SSSSS-CCCEEEECCSSCC
T ss_pred hCCCC-CCCEEEEcCCCCc
Confidence 77777 8888888887654
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.32 E-value=6.1e-11 Score=129.70 Aligned_cols=240 Identities=10% Similarity=0.052 Sum_probs=185.2
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
.|.++ +|+.+.|..+ +..+-+.+|.++ +|+.++|.. .+...-+..|.++.+|+.++|++|.++......|. ..+|
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L 205 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGI 205 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-eccc
Confidence 56675 7999999776 766667788884 799999986 67766778899999999999999999976667776 6899
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCCCCCCC---CCCCcEEEccCC
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDSNLPKL---PRGLVMAFLSNN 268 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~l~ls~N 268 (766)
+.+.|.+| ++..-...|.++++|+.++|..| ++..-. .|.+ .+|+.+.+. |.++..-+.. ..+|+.+.+.+|
T Consensus 206 ~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~ 281 (401)
T 4fdw_A 206 EEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGS 281 (401)
T ss_dssp SEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESS
T ss_pred CEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCc
Confidence 99999855 77666778999999999999876 432222 2555 789999994 4444322222 357899999888
Q ss_pred cCc-----cCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccc
Q 004232 269 SFS-----GEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLT 343 (766)
Q Consensus 269 ~l~-----~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~ 343 (766)
.+. ..-+..|..+++|+.+++. |.++.+....|.+|++|+.+.|..| ++..-+..|..+ +|+.+++++|.+.
T Consensus 282 ~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~ 358 (401)
T 4fdw_A 282 TFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPP 358 (401)
T ss_dssp CCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCC
T ss_pred cccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCc
Confidence 775 3456789999999999999 5688888899999999999999665 665556788888 9999999999887
Q ss_pred cCCCCCCCCCC-CCceeecCCC
Q 004232 344 GGLPSCLSNES-DKRVVKFRGN 364 (766)
Q Consensus 344 g~~p~~~~~~~-~l~~l~l~~N 364 (766)
...+..+..++ .+..+.+..|
T Consensus 359 ~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 359 QVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp BCCCSSCCCSCTTCCEEEECGG
T ss_pred ccccccccCCCCCccEEEeCHH
Confidence 65555555553 4555555443
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=4.7e-12 Score=136.16 Aligned_cols=101 Identities=20% Similarity=0.175 Sum_probs=47.8
Q ss_pred ecccc-cccccCCccccCCCCCCEEeccc-ccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCcc
Q 004232 124 SLVSL-GIWGSLPDKIHRLYSLEYLDLSS-NFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNK 201 (766)
Q Consensus 124 ~L~~n-~l~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 201 (766)
+++++ ++++ +|. |..+++|++|+|++ |+|.+..|..|.+|++|+.|+|++|+|++..|..|.+|++|++|+|++|+
T Consensus 14 ~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 14 RCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp ECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 44444 4432 444 55555555555553 55544444445555555555555555555444445555555555555555
Q ss_pred CCCCCCccccCCCCCCEEEccCCccC
Q 004232 202 LAGPFPSSIQRISTLSDLDLSKNAIS 227 (766)
Q Consensus 202 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 227 (766)
|++..|..|..++ |+.|+|++|.+.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCcc
Confidence 5433333333332 444444444443
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=1.4e-11 Score=132.54 Aligned_cols=105 Identities=23% Similarity=0.158 Sum_probs=93.0
Q ss_pred CEEecccc-cCccCCCccCCCCCCCCEEEccC-CcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEcc
Q 004232 145 EYLDLSSN-FLFGSVPPKISTMVKLQTLILDD-NFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLS 222 (766)
Q Consensus 145 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 222 (766)
..++++++ +|+ .+|. |..+++|++|+|++ |.|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45789988 887 4888 99999999999996 99999888999999999999999999999999999999999999999
Q ss_pred CCccCCCCCCCCCCCCCCEEECCCCCCCC
Q 004232 223 KNAISGSLPDLSSLGSLNVLNLSDNKLDS 251 (766)
Q Consensus 223 ~N~l~~~~p~~~~l~~L~~L~ls~N~l~~ 251 (766)
+|+|++.++.......|+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764433349999999998864
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.4e-13 Score=149.23 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=50.3
Q ss_pred CCCCEEecccccccccCCccccC-----CCCCCEEecccccCccCCCccC-CCCCCCCEEEccCCcCCCCCCccc-----
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHR-----LYSLEYLDLSSNFLFGSVPPKI-STMVKLQTLILDDNFFNNTIPNWF----- 186 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~-----L~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 186 (766)
++|+.|+|++|.++......|.. .++|++|||++|.++......+ ..+.+|++|+|++|.++..-...+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45666666666665433322222 2466666666666543222222 234455556666555543222222
Q ss_pred CCCCCCCEEEccCccCCC----CCCccccCCCCCCEEEccCCcc
Q 004232 187 DSLPSLTFLSMRNNKLAG----PFPSSIQRISTLSDLDLSKNAI 226 (766)
Q Consensus 187 ~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l 226 (766)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l 195 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGL 195 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCC
Confidence 233445555555555432 1222233444444444444444
No 401
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.16 E-value=7.8e-11 Score=121.23 Aligned_cols=149 Identities=16% Similarity=0.100 Sum_probs=112.4
Q ss_pred HHHHHhcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCC
Q 004232 477 ELKEATNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRD 555 (766)
Q Consensus 477 ~l~~~~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~ 555 (766)
.+......|.....+|.|+++.||+.... +..+++|............+.+|+.+++.+. |..+.++++++.+.+
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~--- 83 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG--- 83 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT---
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC---
Confidence 34455567888888898999999999754 6789999986532222346888999999884 667778888877643
Q ss_pred CcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------
Q 004232 556 DYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV------------------------- 610 (766)
Q Consensus 556 ~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------- 610 (766)
..|+||||++|.++.+.+.. ......++.+++++++.||+..
T Consensus 84 -----~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 84 -----WSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp -----EEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred -----ceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 67999999999999875321 1123467888999999999811
Q ss_pred -------------------------------CCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 611 -------------------------------IPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 611 -------------------------------~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
.+.++|+|+++.||+++++..+.|.||+.+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13589999999999998766677999998743
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.06 E-value=9.4e-13 Score=142.73 Aligned_cols=87 Identities=16% Similarity=0.113 Sum_probs=48.4
Q ss_pred CCCCCEEecccccCccCCCccCC-----CCCCCCEEEccCCcCCCCCCccc-CCCCCCCEEEccCccCCCCCCccc----
Q 004232 141 LYSLEYLDLSSNFLFGSVPPKIS-----TMVKLQTLILDDNFFNNTIPNWF-DSLPSLTFLSMRNNKLAGPFPSSI---- 210 (766)
Q Consensus 141 L~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~---- 210 (766)
+++|++|+|++|.++......+. ...+|++|+|++|.++..-...+ ..+++|+.|+|++|+++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 35688888888887643333222 22577777777777654322222 234566777777776654322222
Q ss_pred -cCCCCCCEEEccCCccC
Q 004232 211 -QRISTLSDLDLSKNAIS 227 (766)
Q Consensus 211 -~~l~~L~~L~Ls~N~l~ 227 (766)
...++|+.|+|++|.++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~ 168 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLT 168 (372)
T ss_dssp HSTTCCCCEEECCSSCCH
T ss_pred HhcCCccceeeCCCCCCC
Confidence 12455556666555554
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=3.6e-10 Score=115.82 Aligned_cols=139 Identities=16% Similarity=0.113 Sum_probs=98.9
Q ss_pred hcCCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCc--ccccceeecCCCCCCcCc
Q 004232 482 TNNFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL--VCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 482 ~~~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpni--v~l~g~~~~~~~~~~~~~ 559 (766)
..++.+..+.+.|..+.||+....+|..+++|..... ....+.+|+.+++.+.+.++ .+++++..+.+
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~------- 88 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG------- 88 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-------
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC-------
Confidence 3445544444466679999998777888999987654 22457789999988865454 45777665442
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV----------------------------- 610 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------- 610 (766)
..++||||+++.++. ... .+ ...++.++++.++.||+..
T Consensus 89 -~~~~v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 1nd4_A 89 -RDWLLLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD 156 (264)
T ss_dssp -CEEEEEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred -CCEEEEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence 579999999998884 211 11 2356677788888888642
Q ss_pred --------------------------CCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 611 --------------------------IPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 611 --------------------------~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
.+.++|+|++|.||+++++..++|.|||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12389999999999998876678999998744
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.82 E-value=5.3e-08 Score=106.34 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=50.3
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCc---------------
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF--------------- 177 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~--------------- 177 (766)
+|.++++|+.+.|.. .+..+-..+|.++++|+.++|..| +...-...|.++.+|+.+.+..+-
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~ 143 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKE 143 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSE
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccc
Confidence 345555555555543 243333445555555555555433 332233344445554444433220
Q ss_pred ------CCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCCCCCEEEccCC
Q 004232 178 ------FNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKN 224 (766)
Q Consensus 178 ------l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 224 (766)
....-...|.++++|+.+.+.++- ...-...|.++++|+.+++..|
T Consensus 144 ~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~ 195 (394)
T 4fs7_A 144 ITIPEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN 195 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT
T ss_pred cccCccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC
Confidence 011112345566666666665442 2233344555666666665544
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.82 E-value=1e-08 Score=110.48 Aligned_cols=145 Identities=15% Similarity=0.242 Sum_probs=104.7
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEcc--CCh-hhhHHHHHHHHHHHHhCC--CCCcccccceeecCCCCCCcCcceE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLP--SSK-KYTVRNLKLRLDLLAKLR--HPHLVCLLGHCIDGGGRDDYAVNKV 562 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~~~~e~~~l~~l~--Hpniv~l~g~~~~~~~~~~~~~~~~ 562 (766)
.+.++.|.++.||+....+ ..+++|+.. ... ......+.+|..+++.+. +..+.++++++.+... ....
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~-----~g~~ 116 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESV-----IGRA 116 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTT-----TSSC
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCc-----cCCe
Confidence 4568999999999998765 567788775 332 123456888999999887 4557788888765421 1246
Q ss_pred EEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------
Q 004232 563 FLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGV-------------------------------- 610 (766)
Q Consensus 563 ~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------- 610 (766)
++||||+++..+.+... ..++..++..++.++++.|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999988754221 22677888889999999999999731
Q ss_pred -----------------------CCCcccCCCCCCceEEcCCCc--EEEecCCCCccc
Q 004232 611 -----------------------IPGFFNNRVKTNNILLNEHRI--AKLSDYGLSIVS 643 (766)
Q Consensus 611 -----------------------~~~ivHrdlk~~NILld~~~~--~kl~DFGla~~~ 643 (766)
.+.++|+|+++.||+++.++. +.|.||+.+...
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246899999999999997653 689999998653
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=4.5e-10 Score=120.68 Aligned_cols=82 Identities=18% Similarity=0.146 Sum_probs=36.0
Q ss_pred ccCCCCCCEEecccccCc---------cCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCc
Q 004232 138 IHRLYSLEYLDLSSNFLF---------GSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPS 208 (766)
Q Consensus 138 ~~~L~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 208 (766)
+..+++|+.|.+..+... +.++..+..+++|+.|.|++|.-. .+|. + .+++|++|+|..|.++.....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHH
Confidence 444556666665443221 122333344555555555554211 1222 2 245555555555554322222
Q ss_pred ccc--CCCCCCEEEcc
Q 004232 209 SIQ--RISTLSDLDLS 222 (766)
Q Consensus 209 ~~~--~l~~L~~L~Ls 222 (766)
.+. .+++|+.|+|+
T Consensus 212 ~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHSBCTTCCEEEEE
T ss_pred HHHHccCCCCcEEEEe
Confidence 222 45555555553
No 407
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.74 E-value=8.4e-08 Score=104.75 Aligned_cols=220 Identities=13% Similarity=0.070 Sum_probs=141.7
Q ss_pred CccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCCCEEEccCccCCCCCCccccCCC
Q 004232 135 PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSLTFLSMRNNKLAGPFPSSIQRIS 214 (766)
Q Consensus 135 p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 214 (766)
..+|.++++|+.+++..+. ...-...|.++.+|+.+.+..| +...-...|.+++.|+.+.+..+... +.......+
T Consensus 155 ~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~ 230 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKT 230 (394)
T ss_dssp TTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTC
T ss_pred hhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccC
Confidence 4578888888888887553 3345567888888888888776 55455667888888888887766432 233344456
Q ss_pred CCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCC--CCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCC
Q 004232 215 TLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLD--SNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFN 292 (766)
Q Consensus 215 ~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~--~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N 292 (766)
+|+.+.+..+.-.-.-..+..+..|+.+.+..+... .....-...+..+....+.+ ....|..+.+|+.+.+..+
T Consensus 231 ~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~ 307 (394)
T 4fs7_A 231 GVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS 307 (394)
T ss_dssp CCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT
T ss_pred CCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---ccccccccccccccccccc
Confidence 777777754322111123566777777777665432 10111123344444443332 2345777888888888654
Q ss_pred cCCCCCccccCCCCCCCeEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCC
Q 004232 293 ALRGMPPPAIFSLPNISDLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGN 364 (766)
Q Consensus 293 ~l~~~~~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N 364 (766)
++.+....|.++.+|+.++|..+ ++..-...|..+.+|+.+++..| ++..-...+.++.+|+.+.+..+
T Consensus 308 -i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 308 -VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp -CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred -cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 66666777888888888888654 55344557778888888888776 66555667788888888877654
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.71 E-value=2e-09 Score=115.57 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=62.1
Q ss_pred ccccccCCCCCCEEecccccc---------cccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCC
Q 004232 110 FVTTLARLTSLRVLSLVSLGI---------WGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n~l---------~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
+..++.++++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .+++ +. +++|++|+|..|.++.
T Consensus 131 L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp HHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCH
T ss_pred HHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCCh
Confidence 345677888999999866532 1235566788999999999988411 2444 43 8999999999888764
Q ss_pred CCCcccC--CCCCCCEEEccC
Q 004232 181 TIPNWFD--SLPSLTFLSMRN 199 (766)
Q Consensus 181 ~~p~~~~--~l~~L~~L~L~~ 199 (766)
.....+. .+++|++|+|+.
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~ 228 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYV 228 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEEC
T ss_pred HHHHHHHHccCCCCcEEEEec
Confidence 3333333 799999999864
No 409
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.66 E-value=1.9e-08 Score=105.78 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=115.7
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCc--ccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHL--VCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpni--v~l~g~~~~~~~~~~~~~~~~~l 564 (766)
.+.++.|....||+.. ..+++|..... .....+.+|.++|+.+. +..+ .+.+++....+ .....|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~-----~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE-----TYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS-----SCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-----CCCcceE
Confidence 3568999999999863 46788876432 34567889999998874 3332 23333322211 0113488
Q ss_pred EEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 004232 565 VYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG----------------------------------- 609 (766)
Q Consensus 565 v~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------- 609 (766)
||||++|.++...... .++..++..++.++++.++.||+.
T Consensus 94 vm~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp EEECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred EEcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 9999999888653321 255666777777777777777751
Q ss_pred --------------------CCCCcccCCCCCCceEEcC--CCcEEEecCCCCcccccccccccCCC-----CC------
Q 004232 610 --------------------VIPGFFNNRVKTNNILLNE--HRIAKLSDYGLSIVSEDINSVGGKQE-----DP------ 656 (766)
Q Consensus 610 --------------------~~~~ivHrdlk~~NILld~--~~~~kl~DFGla~~~~~~~~~~~~~~-----~~------ 656 (766)
..+.++|+|+++.||++++ ...+.|.||+.+...+.....+.... .+
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 248 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKI 248 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHH
Confidence 1245799999999999998 45688999999865432111110000 00
Q ss_pred -CcccCCC---------CCCCEeehhHHHHHHhcCCCccc
Q 004232 657 -NSWEMTK---------LEDDVFSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 657 -~~~~~~~---------~~~DV~SfGvil~ElltG~~p~~ 686 (766)
..+.... ...+.|++|.++|++.+|..++.
T Consensus 249 l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 249 LNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0001111 01478999999999999987653
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.54 E-value=3.7e-06 Score=91.61 Aligned_cols=130 Identities=9% Similarity=0.069 Sum_probs=72.0
Q ss_pred cccCCCCCCEEeccccc---ccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCC
Q 004232 113 TLARLTSLRVLSLVSLG---IWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSL 189 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~---l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 189 (766)
+|.++++|+.+.+..|. +..+-..+|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|..+
T Consensus 82 AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c 159 (394)
T 4gt6_A 82 AFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYC 159 (394)
T ss_dssp TTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred HhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecc
Confidence 56777777777776553 43334456777777777666544 44344456677777777777643 333444566677
Q ss_pred CCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCC
Q 004232 190 PSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSD 246 (766)
Q Consensus 190 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~ 246 (766)
.+|+.+.+..+ ++..-...|. ...|+.+.+..+...-....+..+.+|.......
T Consensus 160 ~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~ 214 (394)
T 4gt6_A 160 YSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTRIGTNAFSECFALSTITSDS 214 (394)
T ss_dssp TTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCEECTTTTTTCTTCCEEEECC
T ss_pred cccccccccce-eeEecccccc-ccceeEEEECCcccccccchhhhccccceecccc
Confidence 77777777654 3322223333 3456666665443221122344555555554443
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.53 E-value=8.3e-09 Score=105.27 Aligned_cols=67 Identities=24% Similarity=0.310 Sum_probs=30.0
Q ss_pred cCCCCCCEEecccccCcc--CCCccCCCCCCCCEEEccCCcCCCCCCcccCCCC--CCCEEEccCccCCCCCC
Q 004232 139 HRLYSLEYLDLSSNFLFG--SVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLP--SLTFLSMRNNKLAGPFP 207 (766)
Q Consensus 139 ~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p 207 (766)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 344555555555555544 2233344455555555555555432 1122222 44444444444444333
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=6.7e-09 Score=105.94 Aligned_cols=104 Identities=19% Similarity=0.258 Sum_probs=74.6
Q ss_pred ccCCCCCCE--EecccccCc---cCCCccCCCCCCCCEEEccCCcCCC--CCCcccCCCCCCCEEEccCccCCCCCCccc
Q 004232 138 IHRLYSLEY--LDLSSNFLF---GSVPPKISTMVKLQTLILDDNFFNN--TIPNWFDSLPSLTFLSMRNNKLAGPFPSSI 210 (766)
Q Consensus 138 ~~~L~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 210 (766)
|...+.|.. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 455555665 677777432 2222223568899999999999988 5567778899999999999999865 334
Q ss_pred cCCC--CCCEEEccCCccCCCCCC--------CCCCCCCCEEE
Q 004232 211 QRIS--TLSDLDLSKNAISGSLPD--------LSSLGSLNVLN 243 (766)
Q Consensus 211 ~~l~--~L~~L~Ls~N~l~~~~p~--------~~~l~~L~~L~ 243 (766)
..++ +|++|+|++|.+++.+|. +..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 899999999998876663 45677888775
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=2.2e-08 Score=96.94 Aligned_cols=118 Identities=12% Similarity=0.138 Sum_probs=77.6
Q ss_pred ccccccCCCCCCEEecccc-ccccc----CCccccCCCCCCEEecccccCccC----CCccCCCCCCCCEEEccCCcCCC
Q 004232 110 FVTTLARLTSLRVLSLVSL-GIWGS----LPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFNN 180 (766)
Q Consensus 110 ~~~~l~~l~~L~~L~L~~n-~l~~~----~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 180 (766)
+...+...++|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445777888999999888 77532 445566778888888888887532 33445556778888888887764
Q ss_pred C----CCcccCCCCCCCEEEc--cCccCCCC----CCccccCCCCCCEEEccCCccC
Q 004232 181 T----IPNWFDSLPSLTFLSM--RNNKLAGP----FPSSIQRISTLSDLDLSKNAIS 227 (766)
Q Consensus 181 ~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 227 (766)
. +...+...++|++|+| ++|.++.. +...+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2 3445566677777777 66776532 2233444566777777766653
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.32 E-value=3.4e-06 Score=89.16 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=96.0
Q ss_pred CCCcCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCC---C-CcccccceeecCCCCCCcCc
Q 004232 484 NFDMSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRH---P-HLVCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 484 ~f~~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~H---p-niv~l~g~~~~~~~~~~~~~ 559 (766)
.+...+.++.|....||+. |..+++|...... ....+.+|..+++.+.+ + .+.+++++ +
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---~-------- 100 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ---S-------- 100 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---C--------
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec---C--------
Confidence 4445567899999999997 6678888764322 23558899999988876 1 12333333 1
Q ss_pred ceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC----------------------------
Q 004232 560 NKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVI---------------------------- 611 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~---------------------------- 611 (766)
..++||||+++.++...... .++..++..++.++++.++.||+...
T Consensus 101 -~~~lvme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 101 -DRFNIMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp -SSCEEEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred -CcEEEEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 24899999999888643211 14555666777777777777775322
Q ss_pred --------------------------------CCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 612 --------------------------------PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 612 --------------------------------~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+.++|+|+++.||+++.+..+.|.||+.+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998666799999988543
No 415
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.29 E-value=5.4e-05 Score=81.73 Aligned_cols=240 Identities=9% Similarity=0.004 Sum_probs=129.6
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
+|.++++|+.++|..+ ++.+-..+|.++ +|+.+.+..+ +...-...|.. .+|+.+.+..+ +...-...|.+. +|
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCc-cccccccccccc-ee
Confidence 5778888888888643 555555567776 5777766543 43223333433 47888877654 222222333333 34
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCC------------------------------------CCCCCCCC
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISG------------------------------------SLPDLSSL 236 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------------------------------------~~p~~~~l 236 (766)
+.+.+..+ ++..-...|..+..|+.+.+..+.... ....+...
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 44444332 222333445555666655554432210 00112334
Q ss_pred CCCCEEECCCCCCCCCCCC---CCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEe
Q 004232 237 GSLNVLNLSDNKLDSNLPK---LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNL 313 (766)
Q Consensus 237 ~~L~~L~ls~N~l~~~~p~---~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L 313 (766)
.+|+.+.+..+- ...-.. -...|..+.+..+ ++..-...|.++.+|+.+.+..+ ++.+....|.++++|+.+.+
T Consensus 217 ~~l~~i~~~~~~-~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSGV-TTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTTC-CEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccce-eEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 445555443321 100000 1123455555433 33333456667777777777543 55556667777788888888
Q ss_pred ecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCC
Q 004232 314 ASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (766)
Q Consensus 314 ~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (766)
.+|.++..-...|..+.+|+.++|.++ ++..-...+.++++|+.+.+..
T Consensus 294 ~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 294 DNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 777776444556777777888877654 5544455677777777766644
No 416
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.27 E-value=3.4e-05 Score=83.96 Aligned_cols=244 Identities=10% Similarity=0.076 Sum_probs=153.5
Q ss_pred cccCCC-CCCEEecccccccccCCccccCCCCCCEEeccccc---CccCCCccCCCCCCCCEEEccCCcCCCCCCcccCC
Q 004232 113 TLARLT-SLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF---LFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDS 188 (766)
Q Consensus 113 ~l~~l~-~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 188 (766)
+|.++. .|+.+.+..+ ++.+-..+|.++.+|+.+.++.|. ++..-..+|.++.+|+.+.+.++ ++..-...|.+
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 566774 5999999754 666667889999999999998874 55444677889999999888765 55455677899
Q ss_pred CCCCCEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCC-CCCCCCCCCEEECCCCCCCC--CCCCCCCCCcEEEc
Q 004232 189 LPSLTFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLP-DLSSLGSLNVLNLSDNKLDS--NLPKLPRGLVMAFL 265 (766)
Q Consensus 189 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~l~l 265 (766)
+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++..-. .|. ...|+.+.+..+-..- ....-...+.....
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~ 212 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTRIGTNAFSECFALSTITS 212 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCEECTTTTTTCTTCCEEEE
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccccccchhhhccccceecc
Confidence 999999999754 34345567889999999999765 321111 233 3578888775542210 00000001111100
Q ss_pred c---------------------------C---------CcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCC
Q 004232 266 S---------------------------N---------NSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNIS 309 (766)
Q Consensus 266 s---------------------------~---------N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 309 (766)
. . +.++..-...|..+.+|+.+.+..+. ..+....|.++++|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~ 291 (394)
T 4gt6_A 213 DSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQ 291 (394)
T ss_dssp CCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCC
T ss_pred cccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccccc-ceecCcccccccccc
Confidence 0 0 11111123356677778888776543 334455677777787
Q ss_pred eEEeecCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCCC
Q 004232 310 DLNLASNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRGN 364 (766)
Q Consensus 310 ~L~L~~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~N 364 (766)
.+.+. +.++..-...|..+.+|+.+++..| ++..-...+.++.+|+.+.+..+
T Consensus 292 ~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 292 DIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp EEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred cccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 77775 3454333446677777888777654 55444566777777777776543
No 417
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.27 E-value=3.8e-06 Score=87.15 Aligned_cols=140 Identities=18% Similarity=0.149 Sum_probs=91.7
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCC---CcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP---HLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hp---niv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
.+.||.|.++.||+++..+|..++||+...........+.+|++.|+.++|. .+.+++++. ..++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------------~~~l 87 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------------DRTL 87 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------------TTEE
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------------CcEE
Confidence 4678999999999999888999999997543332345789999999999875 466666542 1389
Q ss_pred EEEccCCCChhh-----------hhhcCCCC------------------CCCCHHHHHH---H------H----------
Q 004232 565 VYEFMSNGNFRT-----------HISENTPG------------------KVLNWSERLA---V------L---------- 596 (766)
Q Consensus 565 v~Ey~~~GsL~~-----------~l~~~~~~------------------~~l~~~~~~~---i------~---------- 596 (766)
||||++++.+.. .+|..... -.-+|..... + +
T Consensus 88 vme~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~ 167 (288)
T 3d1u_A 88 AMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGD 167 (288)
T ss_dssp EEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHH
T ss_pred EEEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999987531 13332110 0124543211 0 0
Q ss_pred -HHHHHHHHHHh----cCCCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 597 -IGVAKAVQFLH----TGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 597 -~~ia~gL~yLH----~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
..+.+.++.+. ....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 168 ~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 168 VRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 01112222232 223468999999999999988 45889999 653
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.20 E-value=1.1e-07 Score=92.14 Aligned_cols=118 Identities=13% Similarity=0.142 Sum_probs=86.3
Q ss_pred cCCccccCCCCCCEEecccc-cCcc----CCCccCCCCCCCCEEEccCCcCCCC----CCcccCCCCCCCEEEccCccCC
Q 004232 133 SLPDKIHRLYSLEYLDLSSN-FLFG----SVPPKISTMVKLQTLILDDNFFNNT----IPNWFDSLPSLTFLSMRNNKLA 203 (766)
Q Consensus 133 ~~p~~~~~L~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 203 (766)
.+...+...++|++|+|++| .+.. .+...+...++|++|+|++|.+... +...+...++|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34456778899999999999 8853 2445667788999999999998642 3344556688999999999987
Q ss_pred CC----CCccccCCCCCCEEEc--cCCccCCCC-----CCCCCCCCCCEEECCCCCCC
Q 004232 204 GP----FPSSIQRISTLSDLDL--SKNAISGSL-----PDLSSLGSLNVLNLSDNKLD 250 (766)
Q Consensus 204 ~~----~p~~~~~l~~L~~L~L--s~N~l~~~~-----p~~~~l~~L~~L~ls~N~l~ 250 (766)
.. +...+...++|++|+| ++|.++..- ..+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 43 3456677788999999 778886421 12445577888888888653
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.12 E-value=2.5e-05 Score=81.89 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=86.7
Q ss_pred CceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCC---CcccccceeecCCCCCCcCcceEEEE
Q 004232 489 AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP---HLVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hp---niv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
+.++.|....||+. |..+++|.... ......+.+|.++|+.+.+. .+-+.++++.... ...++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~-------g~~~~v 91 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD-------GNPFVG 91 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-------SCEEEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC-------CceEEE
Confidence 45788988899987 56677887432 23456789999999998753 2344555554222 246899
Q ss_pred EEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 004232 566 YEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTG------------------------------------ 609 (766)
Q Consensus 566 ~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------ 609 (766)
|||++|..+...... .++..++..++.++++.|+.||+.
T Consensus 92 ~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~ 166 (306)
T 3tdw_A 92 YRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDE 166 (306)
T ss_dssp EECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCH
T ss_pred EeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccch
Confidence 999999887652110 022223333333333333333321
Q ss_pred ---------------------CCCCcccCCCCCCceEEcC---CCc-EEEecCCCCcc
Q 004232 610 ---------------------VIPGFFNNRVKTNNILLNE---HRI-AKLSDYGLSIV 642 (766)
Q Consensus 610 ---------------------~~~~ivHrdlk~~NILld~---~~~-~kl~DFGla~~ 642 (766)
..+.++|+|+++.||+++. ++. +.|.||+.+..
T Consensus 167 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 167 SLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999987 355 58999998754
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.96 E-value=0.00053 Score=73.83 Aligned_cols=241 Identities=10% Similarity=0.038 Sum_probs=145.8
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEccCCcCCCCCCcccCCCCCC
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNFFNNTIPNWFDSLPSL 192 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 192 (766)
++....+|+.+.+.. +++.+-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ +...-...|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 455667788888864 566666678999999999999754 665556677776 7888888755 44444455655 489
Q ss_pred CEEEccCccCCCCCCccccCCCCCCEEEccCCccCCCCCCCCCCCCCCEEECCCCCCCCC----------------C---
Q 004232 193 TFLSMRNNKLAGPFPSSIQRISTLSDLDLSKNAISGSLPDLSSLGSLNVLNLSDNKLDSN----------------L--- 253 (766)
Q Consensus 193 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~l~~L~~L~ls~N~l~~~----------------~--- 253 (766)
+.+.+..+- +..-...|.+. +|..+.+..+--.-....+....+++.+.+..+..... .
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp SEEECCTTC-CEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred ccccCCCcc-ccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 999997653 32233344443 57766665442211122356677777776655432110 0
Q ss_pred --------CC-----------CCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcCCCCCccccCCCCCCCeEEee
Q 004232 254 --------PK-----------LPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNALRGMPPPAIFSLPNISDLNLA 314 (766)
Q Consensus 254 --------p~-----------~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~ 314 (766)
|. ....+..+.+..+ +...-...|..+.+|+.+.+..+ ++.+....|.++.+|+.+.+.
T Consensus 194 ~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~ 271 (379)
T 4h09_A 194 KTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFY 271 (379)
T ss_dssp CCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred ccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccc
Confidence 00 0012233333221 22223345566677777777654 555556667777777777775
Q ss_pred cCcCcccCCccCCCCCCccEEeCcCCccccCCCCCCCCCCCCceeecCC
Q 004232 315 SNKFSGSLPKNLNCGGKLVFFDISNNKLTGGLPSCLSNESDKRVVKFRG 363 (766)
Q Consensus 315 ~N~l~g~~p~~~~~~~~L~~L~ls~N~l~g~~p~~~~~~~~l~~l~l~~ 363 (766)
.+ +...-...|..+.+|+.+++.++.++..-...+.++.+|+.+.+..
T Consensus 272 ~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 272 AK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp CC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred cc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 44 4423334566777788888877777655566777777777777654
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.92 E-value=5e-05 Score=81.53 Aligned_cols=143 Identities=10% Similarity=0.161 Sum_probs=87.7
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCC--cccccceeecCCCCCCcCcceEEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH--LVCLLGHCIDGGGRDDYAVNKVFLV 565 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpn--iv~l~g~~~~~~~~~~~~~~~~~lv 565 (766)
.+.++.|....+|+... +|..+++|..... ..+.+|..+++.+.... +-++++++.+.+ ...++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~-------g~~~lv 112 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE-------SLTYCI 112 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS-------SCEEEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC-------CCeEEE
Confidence 45688999999999876 4778888877543 25788888888886433 344555555432 246999
Q ss_pred EEccCCCChhhh------------------hhcCCCCC--------------CCCHHHHH--------------------
Q 004232 566 YEFMSNGNFRTH------------------ISENTPGK--------------VLNWSERL-------------------- 593 (766)
Q Consensus 566 ~Ey~~~GsL~~~------------------l~~~~~~~--------------~l~~~~~~-------------------- 593 (766)
|||+++.++.+. |+...... .-+|...+
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999998665321 11111000 00122111
Q ss_pred -HHHHHHHHHHHHHhcC-CCCCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 594 -AVLIGVAKAVQFLHTG-VIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 594 -~i~~~ia~gL~yLH~~-~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
.....+..-.+++... ..+.++|+|+.+.||+++++..+.|.||+.+...
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1111122222233221 1256899999999999988777889999988553
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.82 E-value=0.00011 Score=75.23 Aligned_cols=135 Identities=13% Similarity=0.088 Sum_probs=86.5
Q ss_pred ceecCCce-eEEEEEec-CCceEEEEEccCChhhhHHHHHHHHHHHHhCC-CCCcccccceeecCCCCCCcCcceEEEEE
Q 004232 490 IMGEGSYG-KLYKGRLE-NGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR-HPHLVCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 490 ~lG~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~-Hpniv~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
.+..|..| .||+.... ++..+.+|+-... ....+.+|...|+.+. +--+-++++++.+++ ..++||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~--------~~~lvm 99 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD--------DAWLLT 99 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT--------EEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC--------eEEEEE
Confidence 45556555 69987754 4567888876533 3456788999888774 222455677777653 579999
Q ss_pred EccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 004232 567 EFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHT-------------------------------------- 608 (766)
Q Consensus 567 Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-------------------------------------- 608 (766)
|++++.++.+...... ..+..++.+++..|+-||+
T Consensus 100 e~l~G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp ECCCSEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred EeeCCccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9999987765432110 1112233333344444442
Q ss_pred -------------C----CCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 609 -------------G----VIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 609 -------------~----~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
. ..+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1 112379999999999999877777999998744
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.70 E-value=5.4e-05 Score=81.03 Aligned_cols=82 Identities=7% Similarity=0.069 Sum_probs=52.7
Q ss_pred Cce-ecCCceeEEEEEec-------CCceEEEEEccCCh---hhhHHHHHHHHHHHHhCC-C--CCcccccceeecCCCC
Q 004232 489 AIM-GEGSYGKLYKGRLE-------NGTSVAIRCLPSSK---KYTVRNLKLRLDLLAKLR-H--PHLVCLLGHCIDGGGR 554 (766)
Q Consensus 489 ~~l-G~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~~~~e~~~l~~l~-H--pniv~l~g~~~~~~~~ 554 (766)
+.| +.|....+|+.... ++..+++|...... ......+.+|..+++.+. + -.+.++++++.+...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~- 104 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV- 104 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT-
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc-
Confidence 456 78889999998764 25678888765432 101245677888887774 2 245567776654320
Q ss_pred CCcCcceEEEEEEccCCCChh
Q 004232 555 DDYAVNKVFLVYEFMSNGNFR 575 (766)
Q Consensus 555 ~~~~~~~~~lv~Ey~~~GsL~ 575 (766)
....++||||+++..+.
T Consensus 105 ----~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 ----LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp ----TSSCEEEEECCCCBCCC
T ss_pred ----cCCceEEEEecCCCChh
Confidence 02358999999987664
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.59 E-value=0.00032 Score=76.15 Aligned_cols=75 Identities=19% Similarity=0.239 Sum_probs=47.3
Q ss_pred CCceecCCceeEEEEEec-CCceEEEEEccCChh-------hhHHHHHHHHHHHHhCCC--CCcc-cccceeecCCCCCC
Q 004232 488 SAIMGEGSYGKLYKGRLE-NGTSVAIRCLPSSKK-------YTVRNLKLRLDLLAKLRH--PHLV-CLLGHCIDGGGRDD 556 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~e~~~l~~l~H--pniv-~l~g~~~~~~~~~~ 556 (766)
.+.+|.|.++.||+++.. ++..++||....... ....++..|.++++.+.. |..+ +++.+ +.+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~---- 108 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTE---- 108 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETT----
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCC----
Confidence 357899999999999754 467899997653211 123456778888887742 3444 44433 221
Q ss_pred cCcceEEEEEEccCCC
Q 004232 557 YAVNKVFLVYEFMSNG 572 (766)
Q Consensus 557 ~~~~~~~lv~Ey~~~G 572 (766)
..++||||+++.
T Consensus 109 ----~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 ----MAVTVMEDLSHL 120 (397)
T ss_dssp ----TTEEEECCCTTS
T ss_pred ----ccEEEEEeCCCc
Confidence 348999999874
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=3.1e-05 Score=73.17 Aligned_cols=82 Identities=10% Similarity=0.086 Sum_probs=32.8
Q ss_pred CCCEEecccccCccCCCccCCCCCCCCEEEccCCc-CCCCCCcccCCC----CCCCEEEccCcc-CCCCCCccccCCCCC
Q 004232 143 SLEYLDLSSNFLFGSVPPKISTMVKLQTLILDDNF-FNNTIPNWFDSL----PSLTFLSMRNNK-LAGPFPSSIQRISTL 216 (766)
Q Consensus 143 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 216 (766)
+|+.|||+++.++..--..+.++++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34445555444432222233444444444444442 222111112222 245555555542 332111233445555
Q ss_pred CEEEccCC
Q 004232 217 SDLDLSKN 224 (766)
Q Consensus 217 ~~L~Ls~N 224 (766)
+.|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.38 E-value=0.00091 Score=70.67 Aligned_cols=30 Identities=23% Similarity=0.255 Sum_probs=26.9
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
+.++|+|+++.||+++.++.+.|.||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999877889999999764
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.28 E-value=0.00071 Score=69.90 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=53.8
Q ss_pred cCCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCC---CcccccceeecCCCCCCcCcceEE
Q 004232 487 MSAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP---HLVCLLGHCIDGGGRDDYAVNKVF 563 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hp---niv~l~g~~~~~~~~~~~~~~~~~ 563 (766)
-...+|.|..+.||+.+..+|+.|.+|+-..........|.+|...|+.+.-. -+.+++++ +. -+
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~----------~~ 86 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD----------RT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET----------TE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC----------ce
Confidence 34678999999999999999999999987654433345678899888877422 12333332 21 27
Q ss_pred EEEEccCCCCh
Q 004232 564 LVYEFMSNGNF 574 (766)
Q Consensus 564 lv~Ey~~~GsL 574 (766)
+||||++.+..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 99999987654
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.15 E-value=8.7e-05 Score=70.13 Aligned_cols=84 Identities=10% Similarity=0.060 Sum_probs=63.4
Q ss_pred CCCCEEecccccccccCCccccCCCCCCEEeccccc-CccCCCccCCCC----CCCCEEEccCCc-CCCCCCcccCCCCC
Q 004232 118 TSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSSNF-LFGSVPPKISTM----VKLQTLILDDNF-FNNTIPNWFDSLPS 191 (766)
Q Consensus 118 ~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 191 (766)
.+|+.|||+++.++..-=..+.++++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999998865533557899999999999995 543322335554 379999999985 66433345678999
Q ss_pred CCEEEccCcc
Q 004232 192 LTFLSMRNNK 201 (766)
Q Consensus 192 L~~L~L~~N~ 201 (766)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999999985
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.87 E-value=0.008 Score=62.64 Aligned_cols=138 Identities=12% Similarity=0.164 Sum_probs=88.1
Q ss_pred CCceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCC---CCCcccccceeecCCCCCCcCcceEEE
Q 004232 488 SAIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLR---HPHLVCLLGHCIDGGGRDDYAVNKVFL 564 (766)
Q Consensus 488 ~~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~---Hpniv~l~g~~~~~~~~~~~~~~~~~l 564 (766)
.+.|+.|.+..+|+.... +..+++|..... ....+.+|...|+.+. ...+.++++++...+ ..++
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g--------~~~l 108 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG--------HSFL 108 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS--------EEEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC--------ceEE
Confidence 356899999999998764 567778876533 3466888988888773 355677777766542 5799
Q ss_pred EEEccCCCChhh-----------hhhcCCC-C------------------CCCCHHHHH-----HHHHH-----------
Q 004232 565 VYEFMSNGNFRT-----------HISENTP-G------------------KVLNWSERL-----AVLIG----------- 598 (766)
Q Consensus 565 v~Ey~~~GsL~~-----------~l~~~~~-~------------------~~l~~~~~~-----~i~~~----------- 598 (766)
||||+++..+.. .+|.... . -.-+|.... .-..+
T Consensus 109 vme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~ 188 (312)
T 3jr1_A 109 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN 188 (312)
T ss_dssp EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred EEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 999999876521 2333211 0 012565322 11111
Q ss_pred ---HHHH-HHHHhc-CCCCCcccCCCCCCceEEcCCCcEEEecCC
Q 004232 599 ---VAKA-VQFLHT-GVIPGFFNNRVKTNNILLNEHRIAKLSDYG 638 (766)
Q Consensus 599 ---ia~g-L~yLH~-~~~~~ivHrdlk~~NILld~~~~~kl~DFG 638 (766)
+... ...|.. ...|.++|+|+.+.|++++.++ +.|.||.
T Consensus 189 ~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 189 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 233432 2346899999999999999887 8899984
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.70 E-value=0.0057 Score=66.76 Aligned_cols=31 Identities=10% Similarity=0.306 Sum_probs=27.2
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+.++|+|+++.||+++.++ ++|.||+.+...
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 4799999999999998776 999999988653
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.65 E-value=0.0034 Score=56.27 Aligned_cols=37 Identities=24% Similarity=0.451 Sum_probs=27.8
Q ss_pred CCCEEEccCCcCCCCCccccCCCCCCCeEEeecCcCc
Q 004232 283 QLQQLDMSFNALRGMPPPAIFSLPNISDLNLASNKFS 319 (766)
Q Consensus 283 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 319 (766)
+|+.|+|++|+|+.+++..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777777777777777777777778888887764
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.55 E-value=0.008 Score=62.81 Aligned_cols=163 Identities=13% Similarity=0.164 Sum_probs=86.8
Q ss_pred cCHHHHHHHhcCCCcC-----CceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCCC--ccccc
Q 004232 473 FTLEELKEATNNFDMS-----AIMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPH--LVCLL 545 (766)
Q Consensus 473 ~~~~~l~~~~~~f~~~-----~~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpn--iv~l~ 545 (766)
++.+++......|.+. +.|+.|....+|+....+| .+++|...... ..+.+..|+.++..+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4556666666666552 2356688889999987766 56788876521 1234556777766653212 22232
Q ss_pred ceeecCCCCCCc-CcceEEEEEEccCCCChhh--------------hhhcCC-----CC----CCCCHHHHHHH------
Q 004232 546 GHCIDGGGRDDY-AVNKVFLVYEFMSNGNFRT--------------HISENT-----PG----KVLNWSERLAV------ 595 (766)
Q Consensus 546 g~~~~~~~~~~~-~~~~~~lv~Ey~~~GsL~~--------------~l~~~~-----~~----~~l~~~~~~~i------ 595 (766)
.. .++.... .....++++||++|..+.. .+|... +. ....|.....-
T Consensus 84 ~~---~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 84 PR---KDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CB---TTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred CC---CCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 21 0100000 0024689999999865421 122110 00 00124432111
Q ss_pred ------HHHHHHHHHHHhcC----CCCCcccCCCCCCceEEcCCCcEEEecCCCCc
Q 004232 596 ------LIGVAKAVQFLHTG----VIPGFFNNRVKTNNILLNEHRIAKLSDYGLSI 641 (766)
Q Consensus 596 ------~~~ia~gL~yLH~~----~~~~ivHrdlk~~NILld~~~~~kl~DFGla~ 641 (766)
...+.+.+++++.. ..+.++|+|+.+.||+++++..+.|.||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 11244555666532 23478999999999999987666899998764
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.53 E-value=0.0005 Score=66.18 Aligned_cols=113 Identities=17% Similarity=0.162 Sum_probs=66.8
Q ss_pred cccCCCCCCEEecccc-cccc----cCCccccCCCCCCEEecccccCccC----CCccCCCCCCCCEEEccCCcCCCC--
Q 004232 113 TLARLTSLRVLSLVSL-GIWG----SLPDKIHRLYSLEYLDLSSNFLFGS----VPPKISTMVKLQTLILDDNFFNNT-- 181 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n-~l~~----~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~-- 181 (766)
.+.+-+.|+.|+|++| .|.. .+-+.+..-+.|+.|+|++|.|... +...+..=+.|++|+|+.|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 4556678888888875 6632 2344566777888888888887532 223334456778888888877632
Q ss_pred --CCcccCCCCCCCEEEccCcc---CCC----CCCccccCCCCCCEEEccCCc
Q 004232 182 --IPNWFDSLPSLTFLSMRNNK---LAG----PFPSSIQRISTLSDLDLSKNA 225 (766)
Q Consensus 182 --~p~~~~~l~~L~~L~L~~N~---l~~----~~p~~~~~l~~L~~L~Ls~N~ 225 (766)
+-..+..-+.|+.|+|++|. +.. .+-..+..=++|+.|+++.|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 22334455567777776542 221 122223334566666666554
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.44 E-value=0.0039 Score=55.84 Aligned_cols=54 Identities=17% Similarity=0.208 Sum_probs=24.7
Q ss_pred EEECCCCCCC--CCCCCCCCCCcEEEccCCcCccCCcccccCCCCCCEEEccCCcC
Q 004232 241 VLNLSDNKLD--SNLPKLPRGLVMAFLSNNSFSGEIPKQYGQLNQLQQLDMSFNAL 294 (766)
Q Consensus 241 ~L~ls~N~l~--~~~p~~~~~l~~l~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 294 (766)
.++.+++.++ ..+..++.+++.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4444444444 22223444444455555554444444444444455555444443
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.22 E-value=0.014 Score=60.30 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=25.2
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
+.++|+|+.+.||+ ..++.+.+.||..+..
T Consensus 173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 173 LAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 46899999999999 5667789999988754
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.17 E-value=0.087 Score=54.91 Aligned_cols=145 Identities=10% Similarity=0.123 Sum_probs=79.0
Q ss_pred ceecCCceeEEEEEecCCceEEEEEccCChhhhHHHHHHHHHHHHhCCCC--CcccccceeecCCCCCCc-CcceEEEEE
Q 004232 490 IMGEGSYGKLYKGRLENGTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHP--HLVCLLGHCIDGGGRDDY-AVNKVFLVY 566 (766)
Q Consensus 490 ~lG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hp--niv~l~g~~~~~~~~~~~-~~~~~~lv~ 566 (766)
.++ |....||+....+|+.+++|...... .....+..|..+++.+... .+.+++.. ++. ... .....+++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~--~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQ--TLLNHQGFYFAVF 106 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTB--SCEEETTEEEEEE
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCc--EEEEECCEEEEEE
Confidence 456 77889999887778788899886331 1234566677777766321 23444433 111 000 012468899
Q ss_pred EccCCCChhh--------------hhhcC---CC---CCCCCHHHH----HHH---------------HHHHHHHHHHHh
Q 004232 567 EFMSNGNFRT--------------HISEN---TP---GKVLNWSER----LAV---------------LIGVAKAVQFLH 607 (766)
Q Consensus 567 Ey~~~GsL~~--------------~l~~~---~~---~~~l~~~~~----~~i---------------~~~ia~gL~yLH 607 (766)
||+++..+.. .+|.. .+ ....++... ..+ ...+...++.+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9999855321 01211 00 111233211 000 001112223332
Q ss_pred c----CCCCCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 608 T----GVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 608 ~----~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
. ...+.++|+|+++.||+++ + .+.|.||+.+..
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 1234679999999999999 4 899999987643
No 437
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.84 E-value=0.035 Score=58.27 Aligned_cols=33 Identities=12% Similarity=0.099 Sum_probs=27.7
Q ss_pred CCCcccCCCCCCceEEcCC----CcEEEecCCCCccc
Q 004232 611 IPGFFNNRVKTNNILLNEH----RIAKLSDYGLSIVS 643 (766)
Q Consensus 611 ~~~ivHrdlk~~NILld~~----~~~kl~DFGla~~~ 643 (766)
.+.++|||+.+.||+++.+ ..+.|.||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 3478999999999999874 67999999987543
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.62 E-value=0.0031 Score=60.66 Aligned_cols=112 Identities=12% Similarity=0.120 Sum_probs=67.5
Q ss_pred cccCCCCCCEEecccc-cCcc----CCCccCCCCCCCCEEEccCCcCCC----CCCcccCCCCCCCEEEccCccCCCC--
Q 004232 137 KIHRLYSLEYLDLSSN-FLFG----SVPPKISTMVKLQTLILDDNFFNN----TIPNWFDSLPSLTFLSMRNNKLAGP-- 205 (766)
Q Consensus 137 ~~~~L~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~-- 205 (766)
.+.+-+.|++|+|++| .|.. .+-..+..-+.|+.|+|++|.+.. .+...+..-+.|++|+|++|+|+..
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 4556778999999985 6642 133445666788888888888763 2233344557788888888887632
Q ss_pred --CCccccCCCCCCEEEccCCcc---CCC----CC-CCCCCCCCCEEECCCCC
Q 004232 206 --FPSSIQRISTLSDLDLSKNAI---SGS----LP-DLSSLGSLNVLNLSDNK 248 (766)
Q Consensus 206 --~p~~~~~l~~L~~L~Ls~N~l---~~~----~p-~~~~l~~L~~L~ls~N~ 248 (766)
+-..+..-+.|+.|+|++|.. ... +. .+..-+.|+.|+++.|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 122344445688888875422 210 00 12334566777776553
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.56 E-value=0.04 Score=60.15 Aligned_cols=72 Identities=21% Similarity=0.236 Sum_probs=46.4
Q ss_pred CceecCCceeEEEEEecC--------CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCc-ccccceeecCCCCCCcCc
Q 004232 489 AIMGEGSYGKLYKGRLEN--------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL-VCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpni-v~l~g~~~~~~~~~~~~~ 559 (766)
..|+.|-...||+....+ +..+.+|+..... ....+.+|..+++.+...++ .++++.+. +
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~------- 147 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G------- 147 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T-------
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C-------
Confidence 457888889999998753 4678888874321 11344578888887743334 45555432 1
Q ss_pred ceEEEEEEccCCCCh
Q 004232 560 NKVFLVYEFMSNGNF 574 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL 574 (766)
.+|+||+++.++
T Consensus 148 ---g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 ---GRLEEYIPSRPL 159 (429)
T ss_dssp ---EEEECCCCEEEC
T ss_pred ---CEEEEEeCCccc
Confidence 389999986444
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.96 E-value=0.045 Score=58.39 Aligned_cols=73 Identities=15% Similarity=0.176 Sum_probs=41.1
Q ss_pred CceecCCceeEEEEEecC---------CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCcc-cccceeecCCCCCCcC
Q 004232 489 AIMGEGSYGKLYKGRLEN---------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHLV-CLLGHCIDGGGRDDYA 558 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpniv-~l~g~~~~~~~~~~~~ 558 (766)
..++.|....+|+....+ +..+.+|........ ......|..+++.+....++ ++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~------ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG------ 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC------
Confidence 356778888999988654 257888876543221 11235677777766433333 455432 21
Q ss_pred cceEEEEEEccCCCCh
Q 004232 559 VNKVFLVYEFMSNGNF 574 (766)
Q Consensus 559 ~~~~~lv~Ey~~~GsL 574 (766)
++||||+++..+
T Consensus 110 ----~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 ----GRIEEWLYGDPL 121 (369)
T ss_dssp ----EEEEECCCSEEC
T ss_pred ----cEEEEEecCCcC
Confidence 689999997543
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=94.96 E-value=0.11 Score=57.01 Aligned_cols=73 Identities=15% Similarity=0.055 Sum_probs=45.0
Q ss_pred CceecCCceeEEEEEecC-CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCc-ccccceeecCCCCCCcCcceEEEEE
Q 004232 489 AIMGEGSYGKLYKGRLEN-GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL-VCLLGHCIDGGGRDDYAVNKVFLVY 566 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpni-v~l~g~~~~~~~~~~~~~~~~~lv~ 566 (766)
+.|+.|-...+|+....+ +..+.+|+........ -...+|..+++.+...++ .++++++ .+ .+||
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~----------G~v~ 180 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF--TN----------GRIE 180 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT----------EEEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC----------eEEE
Confidence 467788889999998765 4678888764322111 112578888888865555 3566654 21 2599
Q ss_pred EccCCCCh
Q 004232 567 EFMSNGNF 574 (766)
Q Consensus 567 Ey~~~GsL 574 (766)
||+++.++
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99997554
No 442
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=94.65 E-value=0.13 Score=55.00 Aligned_cols=141 Identities=18% Similarity=0.154 Sum_probs=77.1
Q ss_pred CceecCCceeEEEEEecC--------CceEEEEEccCChhhhHHHHHHHHHHHHhCCCCCc-ccccceeecCCCCCCcCc
Q 004232 489 AIMGEGSYGKLYKGRLEN--------GTSVAIRCLPSSKKYTVRNLKLRLDLLAKLRHPHL-VCLLGHCIDGGGRDDYAV 559 (766)
Q Consensus 489 ~~lG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~e~~~l~~l~Hpni-v~l~g~~~~~~~~~~~~~ 559 (766)
+.+..|-...+|+....+ +..+.+|+.... ......+.+|..+++.+.-..+ -++++++. +
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~------- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E------- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T-------
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C-------
Confidence 456678888899988642 467888875332 1234556688888877742222 44555442 1
Q ss_pred ceEEEEEEccCCCChhhh-----------------hhcCCC--CCCCC--HHHHHHHHHHH-------------------
Q 004232 560 NKVFLVYEFMSNGNFRTH-----------------ISENTP--GKVLN--WSERLAVLIGV------------------- 599 (766)
Q Consensus 560 ~~~~lv~Ey~~~GsL~~~-----------------l~~~~~--~~~l~--~~~~~~i~~~i------------------- 599 (766)
-+||||+++..+..- ||.... .+... |.+..+...++
T Consensus 126 ---g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 202 (379)
T 3feg_A 126 ---GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSL 202 (379)
T ss_dssp ---EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTH
T ss_pred ---ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHH
Confidence 289999998655311 121110 11222 23322222221
Q ss_pred HHHHHHH----hcC-CCCCcccCCCCCCceEEcCC----CcEEEecCCCCcc
Q 004232 600 AKAVQFL----HTG-VIPGFFNNRVKTNNILLNEH----RIAKLSDYGLSIV 642 (766)
Q Consensus 600 a~gL~yL----H~~-~~~~ivHrdlk~~NILld~~----~~~kl~DFGla~~ 642 (766)
...+..| ... ....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 203 ~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 203 KDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1123333 221 22468999999999999876 6899999988743
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=92.90 E-value=0.52 Score=49.37 Aligned_cols=32 Identities=9% Similarity=0.255 Sum_probs=27.7
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCccc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIVS 643 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~~ 643 (766)
+.++|+|+.+.||++++++.+.|.||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 46899999999999998788999999877543
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.43 E-value=1.4 Score=47.11 Aligned_cols=30 Identities=33% Similarity=0.346 Sum_probs=26.2
Q ss_pred CCcccCCCCCCceEEcCC------CcEEEecCCCCc
Q 004232 612 PGFFNNRVKTNNILLNEH------RIAKLSDYGLSI 641 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~------~~~kl~DFGla~ 641 (766)
..++|+|+.+.||+++.+ +.+.+.||-.+.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 368999999999999876 789999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=89.43 E-value=0.67 Score=50.11 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=25.9
Q ss_pred CCcccCCCCCCceEEcCCCcEEEecCCCCcc
Q 004232 612 PGFFNNRVKTNNILLNEHRIAKLSDYGLSIV 642 (766)
Q Consensus 612 ~~ivHrdlk~~NILld~~~~~kl~DFGla~~ 642 (766)
..++|+|+.+.||+ +.++.+.+.||-.+..
T Consensus 262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 35899999999999 7788999999988743
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.92 E-value=0.092 Score=57.78 Aligned_cols=61 Identities=13% Similarity=0.103 Sum_probs=18.9
Q ss_pred cCCceecCCceeEEEEEecC-CceEEE------EEccCCh--hhhHHHHHHHHHHHHhCCCCCcccccceeec
Q 004232 487 MSAIMGEGSYGKLYKGRLEN-GTSVAI------RCLPSSK--KYTVRNLKLRLDLLAKLRHPHLVCLLGHCID 550 (766)
Q Consensus 487 ~~~~lG~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~~~~e~~~l~~l~Hpniv~l~g~~~~ 550 (766)
+.+.+| ||.||+|.+.. ..+||| |..+... ......+.+|..+++..+|||+++.++|...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 445666 99999999864 468888 7665432 2234567888999999999999999988654
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=77.89 E-value=6.3 Score=42.03 Aligned_cols=30 Identities=33% Similarity=0.419 Sum_probs=24.6
Q ss_pred CcccCCCCCCceEE------cCCCcEEEecCCCCcc
Q 004232 613 GFFNNRVKTNNILL------NEHRIAKLSDYGLSIV 642 (766)
Q Consensus 613 ~ivHrdlk~~NILl------d~~~~~kl~DFGla~~ 642 (766)
.++|+|+.+.||++ +++..+++.||-+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 3456799999988743
No 448
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=76.81 E-value=10 Score=36.63 Aligned_cols=103 Identities=8% Similarity=0.005 Sum_probs=60.4
Q ss_pred CChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCCCccccccccccc
Q 004232 572 GNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGG 651 (766)
Q Consensus 572 GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~ 651 (766)
-+|.+.|...+ .+++..+.+.++.|.+++|.-.-....+ ..+=.-|..|++..+|.+...+ +.+.. . ....
T Consensus 33 vSL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~~--~-~~~~- 103 (229)
T 2yle_A 33 LSLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADDA--G-EPPP- 103 (229)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-ccccc--c-ccCC-
Confidence 36888887653 4699999999999999988665211111 1233457899999999988764 22210 0 0000
Q ss_pred CCCCCCcccCCCCCCCEeehhHHHHHHhcCCCc
Q 004232 652 KQEDPNSWEMTKLEDDVFSFGFMLLESVAGPSV 684 (766)
Q Consensus 652 ~~~~~~~~~~~~~~~DV~SfGvil~ElltG~~p 684 (766)
.++... ....+.+.=|||+|+++|.-+--..|
T Consensus 104 ~~pe~~-~~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 104 VAGKLG-YSQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---CCS-SSSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred CChhhc-cccchHHHHHHHHHHHHHHHhhcCCC
Confidence 001000 01112345699999999998865444
No 449
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=76.81 E-value=0.47 Score=31.87 Aligned_cols=29 Identities=31% Similarity=0.421 Sum_probs=16.2
Q ss_pred CcccEEeehhHHHHHHHHHHHHhheeeee
Q 004232 393 NVGKLVGIIVGVLVIMVLLAFGFLVVCRR 421 (766)
Q Consensus 393 ~~~~~i~iiv~~~~~~~l~~~~~~~~~rr 421 (766)
+.+.+.++++++++.+.+++...++++||
T Consensus 9 s~GaIAGiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 9 TGGEIVAVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCceeeeehHHHHHHHHHHHHHHHHeec
Confidence 34456677777766655554444444444
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=75.63 E-value=0.65 Score=32.15 Aligned_cols=9 Identities=44% Similarity=0.682 Sum_probs=3.6
Q ss_pred HHhheeeee
Q 004232 413 FGFLVVCRR 421 (766)
Q Consensus 413 ~~~~~~~rr 421 (766)
.+.+++.||
T Consensus 28 ~~~~~~~RR 36 (44)
T 2l2t_A 28 LTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhhh
Confidence 333334344
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=75.31 E-value=0.88 Score=31.58 Aligned_cols=9 Identities=33% Similarity=0.578 Sum_probs=3.6
Q ss_pred HHhheeeee
Q 004232 413 FGFLVVCRR 421 (766)
Q Consensus 413 ~~~~~~~rr 421 (766)
++++++.||
T Consensus 29 ~~~~~~~RR 37 (44)
T 2ks1_B 29 LGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhhh
Confidence 333334344
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.67 E-value=1.5 Score=30.34 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=10.3
Q ss_pred EEeehhHHHHHHHHHHHHhheeeeec
Q 004232 397 LVGIIVGVLVIMVLLAFGFLVVCRRY 422 (766)
Q Consensus 397 ~i~iiv~~~~~~~l~~~~~~~~~rr~ 422 (766)
+++.++|+ +.+++++++++++.||+
T Consensus 14 Ia~~vVGv-ll~vi~~l~~~~~~RRR 38 (44)
T 2jwa_A 14 IISAVVGI-LLVVVLGVVFGILIKRR 38 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHH-HHHHHHHHHHHhheehh
Confidence 34445553 33333344444444443
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=61.20 E-value=14 Score=35.52 Aligned_cols=116 Identities=10% Similarity=0.147 Sum_probs=73.3
Q ss_pred CCCCCcccccceeecCCCCCCcCcceEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 004232 536 LRHPHLVCLLGHCIDGGGRDDYAVNKVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQFLHTGVIPGFF 615 (766)
Q Consensus 536 l~Hpniv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 615 (766)
..||+.+.. .+-.+. +.+.+.|+.-+.+-=...+++ .+-..+++++..|+.-..+++.+ +
T Consensus 42 ~~~~~Fl~~-~I~e~e--------D~v~~~y~~~~~~~~f~~ik~------~~~~eKlr~l~ni~~l~~~~~~r-----~ 101 (215)
T 4ann_A 42 QHSPYFIDA-ELTELR--------DSFQIHYDINDNHTPFDNIKS------FTKNEKLRYLLNIKNLEEVNRTR-----Y 101 (215)
T ss_dssp SCCTTBCCE-EEEECS--------SEEEEEECCCTTSEEGGGGGG------SCHHHHHHHHHHGGGGGGGGGSS-----E
T ss_pred ccCCcccce-EEEEcc--------cEEEEEEEcCcccCCHHHHHh------cCHHHHHHHHHHHHHHHHHhcCc-----e
Confidence 468888865 222222 245555554432222222332 56789999999998887777754 5
Q ss_pred cCCCCCCceEEcCCCcEEEecCCCCcccccccccccCCCCCCcccCCCCCCCE-eehhHHHHHHhcCCCccc
Q 004232 616 NNRVKTNNILLNEHRIAKLSDYGLSIVSEDINSVGGKQEDPNSWEMTKLEDDV-FSFGFMLLESVAGPSVAA 686 (766)
Q Consensus 616 Hrdlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~DV-~SfGvil~ElltG~~p~~ 686 (766)
|=-+.|+|+.+|.++.+++.-.|+.....+. ...+.|- -.+=+++.-+++++..|+
T Consensus 102 tf~L~P~NL~f~~~~~p~i~~RGik~~l~P~---------------~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 102 TFVLAPDELFFTRDGLPIAKTRGLQNVVDPL---------------PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp ECCCSGGGEEECTTSCEEESCCEETTTBSCC---------------CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEEecceEEEcCCCCEEEEEccCccCCCCC---------------CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 6678899999999999999988874222110 0011232 256678888888887764
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=56.57 E-value=13 Score=35.68 Aligned_cols=100 Identities=14% Similarity=0.040 Sum_probs=64.6
Q ss_pred eEEEEEEccCCCChhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCcccCCCCCCceEEcCCCcEEEecCCC
Q 004232 561 KVFLVYEFMSNGNFRTHISENTPGKVLNWSERLAVLIGVAKAVQ-FLHTGVIPGFFNNRVKTNNILLNEHRIAKLSDYGL 639 (766)
Q Consensus 561 ~~~lv~Ey~~~GsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrdlk~~NILld~~~~~kl~DFGl 639 (766)
.+.+.|+--+++-=...+++ .+...|++++..++.-.. +++.+ +|=-+.|+|+++|.++.+++.-.|+
T Consensus 62 ~~~i~y~~~~~~~~f~~i~~------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~~~~p~i~hRGi 130 (219)
T 4ano_A 62 EVKVVIKPPSSFLTFAAIRK------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNRALEPFFLHVGV 130 (219)
T ss_dssp EEEEEEECCTTCEEHHHHHT------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECTTCCEEESCCEE
T ss_pred EEEEEEEcCcccCcHHHHHh------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeCCCcEEEEEcCC
Confidence 55666665544433334432 567899999998887776 66654 5566889999999999999998887
Q ss_pred CcccccccccccCCCCCCcccCCCCCCCEe-ehhHHHHHHhcCCCccc
Q 004232 640 SIVSEDINSVGGKQEDPNSWEMTKLEDDVF-SFGFMLLESVAGPSVAA 686 (766)
Q Consensus 640 a~~~~~~~~~~~~~~~~~~~~~~~~~~DV~-SfGvil~ElltG~~p~~ 686 (766)
-....+ . . ..+.|-| .+=+++.-++.++..|+
T Consensus 131 ~~~lpP---------~--e----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 131 KESLPP---------D--E----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp TTTBSS---------C--S----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred cccCCC---------C--C----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 422210 0 0 0112322 56677778888776654
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=34.02 E-value=98 Score=25.37 Aligned_cols=39 Identities=15% Similarity=0.049 Sum_probs=17.2
Q ss_pred CccccCCCCCCEEecccccCccCCCccCCCCCCCCEEEcc
Q 004232 135 PDKIHRLYSLEYLDLSSNFLFGSVPPKISTMVKLQTLILD 174 (766)
Q Consensus 135 p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 174 (766)
..+|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+.
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 344555555555554432 222233344444444444443
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=29.44 E-value=18 Score=24.43 Aligned_cols=6 Identities=33% Similarity=0.739 Sum_probs=2.4
Q ss_pred heeeee
Q 004232 416 LVVCRR 421 (766)
Q Consensus 416 ~~~~rr 421 (766)
++++||
T Consensus 34 ~~~~rR 39 (41)
T 2k9y_A 34 FFIHRR 39 (41)
T ss_dssp HSSSSS
T ss_pred eeEeee
Confidence 334443
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.94 E-value=1e+02 Score=25.24 Aligned_cols=38 Identities=21% Similarity=0.079 Sum_probs=21.6
Q ss_pred cccCCCCCCEEecccccccccCCccccCCCCCCEEeccc
Q 004232 113 TLARLTSLRVLSLVSLGIWGSLPDKIHRLYSLEYLDLSS 151 (766)
Q Consensus 113 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~L~~L~~L~Ls~ 151 (766)
.|.++++|+.+.|..+ ++.+-..+|.++.+|+.+.+..
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 4566666666666543 3333344566666666666653
Done!