Query 004234
Match_columns 766
No_of_seqs 498 out of 3734
Neff 6.2
Searched_HMMs 46136
Date Thu Mar 28 19:52:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004234.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004234hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0661 AarF Predicted unusual 100.0 1.3E-85 2.7E-90 746.7 50.4 387 221-638 53-440 (517)
2 PRK04750 ubiB putative ubiquin 100.0 2.4E-84 5.3E-89 740.7 54.7 416 224-677 50-471 (537)
3 TIGR01982 UbiB 2-polyprenylphe 100.0 2.5E-77 5.3E-82 673.6 41.0 383 224-637 48-431 (437)
4 KOG1235 Predicted unusual prot 100.0 2.1E-67 4.6E-72 595.7 40.9 383 224-630 92-485 (538)
5 KOG1236 Predicted unusual prot 100.0 4E-54 8.7E-59 462.4 27.9 377 224-629 119-555 (565)
6 KOG1234 ABC (ATP binding casse 100.0 3.7E-35 8E-40 302.3 16.1 349 247-624 2-353 (363)
7 PF03109 ABC1: ABC1 family; I 99.9 3.5E-27 7.5E-32 221.3 7.6 118 283-403 1-119 (119)
8 cd05145 RIO1_like RIO kinase f 99.8 6.4E-19 1.4E-23 177.4 15.2 180 299-513 3-187 (190)
9 cd05147 RIO1_euk RIO kinase fa 99.8 4.3E-18 9.4E-23 172.1 17.2 164 299-489 3-170 (190)
10 KOG0595 Serine/threonine-prote 99.8 3.4E-18 7.3E-23 185.2 16.4 186 299-538 16-210 (429)
11 smart00090 RIO RIO-like kinase 99.7 5.2E-16 1.1E-20 162.3 15.8 186 299-521 34-226 (237)
12 PRK10359 lipopolysaccharide co 99.7 5.1E-16 1.1E-20 161.3 15.5 143 299-489 37-187 (232)
13 cd05144 RIO2_C RIO kinase fami 99.7 8.6E-16 1.9E-20 155.2 16.8 170 298-503 20-196 (198)
14 KOG0581 Mitogen-activated prot 99.7 4.5E-17 9.7E-22 175.1 7.5 177 299-534 85-269 (364)
15 KOG0605 NDR and related serine 99.7 6.8E-16 1.5E-20 172.0 15.9 195 295-539 142-385 (550)
16 KOG0616 cAMP-dependent protein 99.7 1.5E-15 3.3E-20 159.0 17.4 189 294-539 44-238 (355)
17 KOG0192 Tyrosine kinase specif 99.7 1.2E-15 2.5E-20 168.8 15.3 185 300-536 48-240 (362)
18 KOG0592 3-phosphoinositide-dep 99.6 1E-15 2.2E-20 170.7 13.5 189 299-537 79-282 (604)
19 KOG0615 Serine/threonine prote 99.6 2.5E-16 5.5E-21 170.7 6.1 194 298-539 177-378 (475)
20 cd05119 RIO RIO kinase family, 99.6 1E-14 2.3E-19 144.9 16.5 164 299-495 3-173 (187)
21 KOG0661 MAPK related serine/th 99.6 8.5E-16 1.8E-20 169.1 8.8 184 299-535 16-203 (538)
22 PRK14879 serine/threonine prot 99.6 2.2E-14 4.8E-19 145.2 17.3 144 299-487 2-145 (211)
23 KOG0593 Predicted protein kina 99.6 2.1E-14 4.6E-19 150.9 16.3 183 299-536 8-196 (396)
24 cd05628 STKc_NDR1 Catalytic do 99.6 8.2E-15 1.8E-19 161.2 14.1 190 299-537 7-231 (363)
25 KOG1187 Serine/threonine prote 99.6 9.3E-15 2E-19 161.9 13.5 186 294-536 75-272 (361)
26 cd05085 PTKc_Fer Catalytic dom 99.6 2E-14 4.4E-19 147.9 14.8 185 299-536 1-188 (250)
27 KOG0575 Polo-like serine/threo 99.6 7.1E-15 1.5E-19 166.1 12.3 182 299-536 24-212 (592)
28 KOG0598 Ribosomal protein S6 k 99.6 9E-15 1.9E-19 157.4 12.5 191 294-538 25-221 (357)
29 cd05600 STKc_Sid2p_Dbf2p Catal 99.6 1.4E-14 3E-19 157.0 14.1 183 299-537 7-193 (333)
30 cd05096 PTKc_DDR1 Catalytic do 99.6 1.5E-14 3.3E-19 154.2 13.9 186 299-536 11-234 (304)
31 KOG4236 Serine/threonine prote 99.6 1.4E-15 3.1E-20 168.0 6.0 194 288-534 559-758 (888)
32 KOG4250 TANK binding protein k 99.6 6.4E-15 1.4E-19 168.6 11.3 194 295-539 15-221 (732)
33 PTZ00263 protein kinase A cata 99.6 3.2E-14 6.9E-19 154.5 15.7 183 299-537 24-210 (329)
34 cd05084 PTKc_Fes Catalytic dom 99.6 2.2E-14 4.7E-19 148.1 13.6 186 299-536 1-190 (252)
35 TIGR03724 arch_bud32 Kae1-asso 99.6 5.7E-14 1.2E-18 141.1 16.0 140 301-488 2-141 (199)
36 cd05593 STKc_PKB_gamma Catalyt 99.6 2.9E-14 6.3E-19 154.8 14.3 185 300-537 2-190 (328)
37 KOG0574 STE20-like serine/thre 99.6 1.5E-15 3.1E-20 158.8 3.5 195 276-532 18-219 (502)
38 cd05571 STKc_PKB Catalytic dom 99.6 2.6E-14 5.6E-19 154.6 13.3 184 300-536 2-189 (323)
39 KOG0597 Serine-threonine prote 99.6 2.1E-14 4.6E-19 160.4 12.7 179 299-535 8-193 (808)
40 cd05631 STKc_GRK4 Catalytic do 99.6 4.6E-14 9.9E-19 149.5 14.8 185 299-536 6-195 (285)
41 cd05590 STKc_nPKC_eta Catalyti 99.6 5.1E-14 1.1E-18 152.3 15.5 186 300-537 2-191 (320)
42 KOG0694 Serine/threonine prote 99.6 4.2E-14 9.1E-19 161.6 15.3 230 299-609 374-606 (694)
43 cd05599 STKc_NDR_like Catalyti 99.5 1.6E-14 3.5E-19 158.3 11.5 192 299-537 7-234 (364)
44 cd05612 STKc_PRKX_like Catalyt 99.5 5.3E-14 1.1E-18 149.7 14.9 181 299-537 7-193 (291)
45 cd05602 STKc_SGK1 Catalytic do 99.5 3.1E-14 6.6E-19 154.0 13.2 185 300-536 2-190 (325)
46 cd05102 PTKc_VEGFR3 Catalytic 99.5 4.8E-14 1E-18 152.8 14.7 86 445-536 185-270 (338)
47 cd05591 STKc_nPKC_epsilon Cata 99.5 5.9E-14 1.3E-18 151.5 15.3 186 300-537 2-191 (321)
48 cd05604 STKc_SGK3 Catalytic do 99.5 3.2E-14 6.9E-19 153.9 13.1 185 300-536 2-190 (325)
49 KOG0583 Serine/threonine prote 99.5 4.1E-14 8.9E-19 157.2 14.2 188 299-538 23-219 (370)
50 cd05627 STKc_NDR2 Catalytic do 99.5 1.3E-14 2.8E-19 159.3 10.1 189 299-536 7-230 (360)
51 cd05626 STKc_LATS2 Catalytic d 99.5 3.1E-14 6.8E-19 157.7 13.2 192 299-537 7-243 (381)
52 cd05592 STKc_nPKC_theta_delta 99.5 6.2E-14 1.3E-18 151.3 15.1 185 300-536 2-190 (316)
53 cd05616 STKc_cPKC_beta Catalyt 99.5 7.5E-14 1.6E-18 150.9 15.3 187 299-537 6-196 (323)
54 cd05575 STKc_SGK Catalytic dom 99.5 4.4E-14 9.4E-19 152.7 13.4 185 300-537 2-191 (323)
55 cd05595 STKc_PKB_beta Catalyti 99.5 4.4E-14 9.5E-19 153.0 13.4 185 300-537 2-190 (323)
56 cd05608 STKc_GRK1 Catalytic do 99.5 1.2E-13 2.6E-18 146.0 16.1 185 301-537 1-192 (280)
57 cd05615 STKc_cPKC_alpha Cataly 99.5 8.3E-14 1.8E-18 150.8 15.2 187 299-537 6-196 (323)
58 KOG0591 NIMA (never in mitosis 99.5 1.5E-14 3.3E-19 150.7 8.8 182 299-535 25-221 (375)
59 cd05594 STKc_PKB_alpha Catalyt 99.5 3.7E-14 8E-19 153.4 12.3 184 300-536 2-190 (325)
60 KOG0578 p21-activated serine/t 99.5 5.3E-14 1.2E-18 158.0 13.8 189 288-537 270-464 (550)
61 cd05603 STKc_SGK2 Catalytic do 99.5 5.6E-14 1.2E-18 151.6 13.1 185 300-536 2-190 (321)
62 cd05585 STKc_YPK1_like Catalyt 99.5 8.5E-14 1.8E-18 149.7 14.4 184 301-537 1-188 (312)
63 KOG0193 Serine/threonine prote 99.5 2E-14 4.3E-19 162.2 9.5 194 289-537 387-588 (678)
64 KOG0600 Cdc2-related protein k 99.5 2.4E-14 5.2E-19 158.7 9.9 194 290-536 116-314 (560)
65 cd05620 STKc_nPKC_delta Cataly 99.5 1.1E-13 2.4E-18 149.3 15.0 184 300-537 2-191 (316)
66 PTZ00426 cAMP-dependent protei 99.5 1.4E-13 3.1E-18 150.6 15.7 183 299-537 36-223 (340)
67 cd06657 STKc_PAK4 Catalytic do 99.5 8.5E-14 1.8E-18 148.5 13.4 197 283-536 3-210 (292)
68 cd05624 STKc_MRCK_beta Catalyt 99.5 8.2E-14 1.8E-18 151.4 13.5 188 299-537 7-203 (331)
69 cd05618 STKc_aPKC_iota Catalyt 99.5 1E-13 2.2E-18 150.7 14.1 186 300-537 2-191 (329)
70 cd05598 STKc_LATS Catalytic do 99.5 4.6E-14 9.9E-19 155.7 11.5 191 299-536 7-238 (376)
71 cd05573 STKc_ROCK_NDR_like Cat 99.5 3.6E-14 7.9E-19 154.1 10.6 191 299-536 7-224 (350)
72 cd05588 STKc_aPKC Catalytic do 99.5 1.5E-13 3.4E-18 149.1 15.0 183 300-537 2-191 (329)
73 cd05587 STKc_cPKC Catalytic do 99.5 1.5E-13 3.3E-18 148.5 14.8 185 299-537 6-196 (324)
74 cd05617 STKc_aPKC_zeta Catalyt 99.5 1.5E-13 3.2E-18 149.1 14.7 184 300-537 2-191 (327)
75 cd05584 STKc_p70S6K Catalytic 99.5 1.3E-13 2.8E-18 149.1 13.9 185 299-536 2-194 (323)
76 cd05614 STKc_MSK2_N N-terminal 99.5 1.4E-13 3.1E-18 148.9 14.2 189 299-537 6-202 (332)
77 PLN00034 mitogen-activated pro 99.5 1E-13 2.3E-18 151.7 13.0 181 299-536 80-267 (353)
78 PF01163 RIO1: RIO1 family; I 99.5 1.8E-13 4E-18 138.4 13.7 176 309-519 2-182 (188)
79 cd05589 STKc_PKN Catalytic dom 99.5 1E-13 2.3E-18 149.8 12.7 187 299-536 5-195 (324)
80 cd06649 PKc_MEK2 Catalytic dom 99.5 2E-13 4.3E-18 148.2 14.8 180 299-536 11-196 (331)
81 cd05629 STKc_NDR_like_fungal C 99.5 1.3E-13 2.8E-18 152.4 13.4 190 299-537 7-243 (377)
82 cd05597 STKc_DMPK_like Catalyt 99.5 2.2E-13 4.8E-18 148.0 15.0 185 299-536 7-202 (331)
83 cd05625 STKc_LATS1 Catalytic d 99.5 1.3E-13 2.9E-18 152.5 13.1 190 299-537 7-243 (382)
84 cd07878 STKc_p38beta_MAPK11 Ca 99.5 1E-13 2.2E-18 150.7 11.9 198 282-537 3-211 (343)
85 KOG0659 Cdk activating kinase 99.5 1.6E-13 3.5E-18 142.2 12.5 183 299-536 8-196 (318)
86 KOG0577 Serine/threonine prote 99.5 2.5E-14 5.4E-19 160.1 7.0 187 286-531 21-214 (948)
87 cd05601 STKc_CRIK Catalytic do 99.5 7.5E-14 1.6E-18 151.0 10.5 187 299-536 7-203 (330)
88 cd05621 STKc_ROCK2 Catalytic d 99.5 1.3E-13 2.8E-18 152.8 12.6 186 299-537 49-242 (370)
89 cd05122 PKc_STE Catalytic doma 99.5 4.8E-13 1E-17 136.0 15.5 182 299-536 6-191 (253)
90 cd07862 STKc_CDK6 Catalytic do 99.5 3.1E-13 6.7E-18 142.6 14.5 187 299-536 7-203 (290)
91 cd05622 STKc_ROCK1 Catalytic d 99.5 2.3E-13 4.9E-18 150.8 13.9 184 299-537 49-242 (371)
92 KOG0585 Ca2+/calmodulin-depend 99.5 2.8E-13 6E-18 149.4 14.3 200 299-536 103-313 (576)
93 cd06642 STKc_STK25-YSK1 Cataly 99.5 3.7E-13 8E-18 141.3 14.5 189 290-536 3-195 (277)
94 cd05623 STKc_MRCK_alpha Cataly 99.5 2.9E-13 6.3E-18 147.0 14.0 185 299-536 7-202 (332)
95 cd00192 PTKc Catalytic domain 99.5 5.4E-13 1.2E-17 136.8 15.3 187 299-537 1-202 (262)
96 cd05104 PTKc_Kit Catalytic dom 99.5 4.5E-13 9.7E-18 148.5 15.2 85 446-536 226-310 (375)
97 PTZ00267 NIMA-related protein 99.5 2.7E-13 5.8E-18 155.4 13.8 186 299-537 73-266 (478)
98 cd05607 STKc_GRK7 Catalytic do 99.5 6.8E-13 1.5E-17 140.0 15.8 184 301-537 1-189 (277)
99 PRK09188 serine/threonine prot 99.5 4.9E-13 1.1E-17 148.1 15.2 138 299-489 24-165 (365)
100 KOG0032 Ca2+/calmodulin-depend 99.5 1.7E-13 3.6E-18 152.8 11.6 189 299-539 41-235 (382)
101 cd05064 PTKc_EphR_A10 Catalyti 99.5 4.3E-13 9.4E-18 140.3 14.1 184 299-536 11-202 (266)
102 cd07869 STKc_PFTAIRE1 Catalyti 99.5 2.4E-13 5.2E-18 145.1 12.2 184 299-537 11-199 (303)
103 cd07871 STKc_PCTAIRE3 Catalyti 99.5 3E-13 6.6E-18 143.5 12.8 181 299-536 11-198 (288)
104 cd05082 PTKc_Csk Catalytic dom 99.5 5.3E-13 1.2E-17 138.3 14.3 179 299-536 12-193 (256)
105 cd05605 STKc_GRK4_like Catalyt 99.5 6.1E-13 1.3E-17 140.9 14.9 186 299-537 6-196 (285)
106 cd07848 STKc_CDKL5 Catalytic d 99.5 3E-13 6.5E-18 142.5 12.5 186 299-537 7-196 (287)
107 cd05596 STKc_ROCK Catalytic do 99.5 2.4E-13 5.3E-18 150.4 12.3 186 299-537 49-242 (370)
108 PTZ00283 serine/threonine prot 99.5 2.8E-13 6.1E-18 156.1 13.3 122 410-537 114-240 (496)
109 cd06605 PKc_MAPKK Catalytic do 99.5 7.6E-13 1.6E-17 137.2 15.2 181 299-536 7-193 (265)
110 cd06635 STKc_TAO1 Catalytic do 99.5 1.7E-12 3.8E-17 139.7 18.5 199 280-537 14-219 (317)
111 cd05632 STKc_GRK5 Catalytic do 99.5 7.9E-13 1.7E-17 140.1 15.4 186 299-537 6-196 (285)
112 KOG0201 Serine/threonine prote 99.5 5.8E-14 1.3E-18 153.6 6.8 191 287-536 9-205 (467)
113 KOG0663 Protein kinase PITSLRE 99.5 8.6E-14 1.9E-18 147.9 7.8 187 299-537 82-273 (419)
114 cd08529 STKc_FA2-like Catalyti 99.5 1.8E-12 4E-17 133.4 17.3 185 299-536 6-195 (256)
115 cd06650 PKc_MEK1 Catalytic dom 99.5 7.9E-13 1.7E-17 143.9 15.1 180 299-536 11-196 (333)
116 cd05033 PTKc_EphR Catalytic do 99.5 9.6E-13 2.1E-17 137.1 15.1 185 299-536 10-202 (266)
117 cd05048 PTKc_Ror Catalytic Dom 99.5 7.9E-13 1.7E-17 138.8 14.5 186 299-536 11-220 (283)
118 cd06640 STKc_MST4 Catalytic do 99.5 9.6E-13 2.1E-17 138.3 15.0 180 299-536 10-195 (277)
119 KOG0667 Dual-specificity tyros 99.5 2.3E-13 4.9E-18 155.3 10.9 186 298-537 191-383 (586)
120 cd05619 STKc_nPKC_theta Cataly 99.5 8.6E-13 1.9E-17 142.6 15.0 186 300-537 2-191 (316)
121 cd05570 STKc_PKC Catalytic dom 99.4 1E-12 2.2E-17 141.9 15.5 184 300-537 2-191 (318)
122 cd06917 STKc_NAK1_like Catalyt 99.4 8.7E-13 1.9E-17 138.1 14.5 186 299-537 7-197 (277)
123 cd05063 PTKc_EphR_A2 Catalytic 99.4 7.5E-13 1.6E-17 137.9 13.6 187 299-536 11-204 (268)
124 cd05582 STKc_RSK_N N-terminal 99.4 3.6E-13 7.8E-18 145.1 11.4 184 299-536 2-192 (318)
125 KOG0582 Ste20-like serine/thre 99.4 5.4E-13 1.2E-17 146.3 12.7 187 299-535 32-225 (516)
126 cd05115 PTKc_Zap-70 Catalytic 99.4 9.9E-13 2.2E-17 137.0 14.3 184 301-536 3-192 (257)
127 cd05586 STKc_Sck1_like Catalyt 99.4 3.4E-13 7.4E-18 146.0 11.1 123 405-536 66-191 (330)
128 PF00069 Pkinase: Protein kina 99.4 4.6E-13 1E-17 137.9 11.5 185 299-537 5-194 (260)
129 cd05068 PTKc_Frk_like Catalyti 99.4 9E-13 2E-17 136.9 13.7 183 299-536 12-198 (261)
130 cd05108 PTKc_EGFR Catalytic do 99.4 6.4E-13 1.4E-17 142.9 13.0 184 299-536 13-205 (316)
131 cd05041 PTKc_Fes_like Catalyti 99.4 1E-12 2.2E-17 135.3 13.7 187 299-537 1-190 (251)
132 cd07874 STKc_JNK3 Catalytic do 99.4 1E-12 2.2E-17 143.7 14.4 195 286-537 9-213 (355)
133 cd05049 PTKc_Trk Catalytic dom 99.4 7.7E-13 1.7E-17 138.5 12.8 186 299-536 11-218 (280)
134 cd05040 PTKc_Ack_like Catalyti 99.4 1.3E-12 2.9E-17 134.9 14.3 186 299-536 1-194 (257)
135 KOG0660 Mitogen-activated prot 99.4 2E-13 4.4E-18 146.6 8.3 192 298-537 27-223 (359)
136 cd05090 PTKc_Ror1 Catalytic do 99.4 9.7E-13 2.1E-17 138.5 13.4 184 299-536 11-220 (283)
137 PRK13184 pknD serine/threonine 99.4 9.3E-13 2E-17 159.2 14.9 192 299-537 8-226 (932)
138 cd05109 PTKc_HER2 Catalytic do 99.4 1.2E-12 2.7E-17 137.4 14.1 185 299-536 13-205 (279)
139 cd05112 PTKc_Itk Catalytic dom 99.4 2.1E-12 4.5E-17 133.4 15.3 183 299-536 10-195 (256)
140 cd05114 PTKc_Tec_Rlk Catalytic 99.4 1.7E-12 3.6E-17 134.5 14.6 183 299-536 10-195 (256)
141 cd07872 STKc_PCTAIRE2 Catalyti 99.4 8.4E-13 1.8E-17 141.3 12.6 183 299-537 12-200 (309)
142 cd06629 STKc_MAPKKK_Bck1_like 99.4 2.3E-12 5E-17 134.5 15.6 201 293-537 1-207 (272)
143 KOG0612 Rho-associated, coiled 99.4 2E-13 4.2E-18 162.4 8.4 120 408-536 148-275 (1317)
144 cd06641 STKc_MST3 Catalytic do 99.4 2.1E-12 4.5E-17 135.8 15.3 189 289-536 2-195 (277)
145 KOG0594 Protein kinase PCTAIRE 99.4 1.1E-12 2.4E-17 140.8 13.4 185 300-536 18-215 (323)
146 smart00219 TyrKc Tyrosine kina 99.4 1.9E-12 4.2E-17 132.9 14.8 183 299-536 5-198 (258)
147 cd06627 STKc_Cdc7_like Catalyt 99.4 3.2E-12 6.9E-17 131.0 16.3 184 299-536 6-193 (254)
148 cd06625 STKc_MEKK3_like Cataly 99.4 1.6E-12 3.6E-17 134.5 14.3 190 299-537 8-202 (263)
149 cd06656 STKc_PAK3 Catalytic do 99.4 1.7E-12 3.6E-17 138.6 14.4 182 299-537 25-210 (297)
150 cd07875 STKc_JNK1 Catalytic do 99.4 9.8E-13 2.1E-17 144.5 12.7 188 293-537 23-220 (364)
151 cd00180 PKc Catalytic domain o 99.4 3.3E-12 7.2E-17 124.7 15.1 182 301-535 1-187 (215)
152 cd05630 STKc_GRK6 Catalytic do 99.4 2.4E-12 5.3E-17 136.5 15.3 186 299-537 6-196 (285)
153 cd07859 STKc_TDY_MAPK_plant Ca 99.4 7.3E-13 1.6E-17 142.9 11.5 188 299-537 6-203 (338)
154 cd05103 PTKc_VEGFR2 Catalytic 99.4 2E-12 4.3E-17 141.3 14.9 85 446-536 191-275 (343)
155 cd06619 PKc_MKK5 Catalytic dom 99.4 2.2E-12 4.7E-17 136.0 14.7 178 299-537 7-188 (279)
156 cd05070 PTKc_Fyn_Yrk Catalytic 99.4 3.8E-12 8.3E-17 132.2 16.3 183 299-537 12-198 (260)
157 cd05580 STKc_PKA Catalytic dom 99.4 3.1E-12 6.6E-17 135.6 15.9 183 299-537 7-193 (290)
158 cd05079 PTKc_Jak1_rpt2 Catalyt 99.4 1.7E-12 3.6E-17 137.0 13.6 189 299-537 10-207 (284)
159 cd05633 STKc_GRK3 Catalytic do 99.4 3.1E-12 6.7E-17 135.3 15.7 183 300-536 1-190 (279)
160 cd05039 PTKc_Csk_like Catalyti 99.4 2.8E-12 6.1E-17 132.6 14.9 178 299-536 12-193 (256)
161 cd06631 STKc_YSK4 Catalytic do 99.4 2.5E-12 5.3E-17 133.8 14.5 193 299-536 6-202 (265)
162 cd05072 PTKc_Lyn Catalytic dom 99.4 2.1E-12 4.6E-17 134.0 13.9 183 299-536 12-198 (261)
163 cd06612 STKc_MST1_2 Catalytic 99.4 3.1E-12 6.8E-17 131.7 15.0 180 299-536 9-193 (256)
164 KOG0608 Warts/lats-like serine 99.4 1E-12 2.3E-17 148.2 12.1 188 299-536 635-865 (1034)
165 cd07876 STKc_JNK2 Catalytic do 99.4 1.7E-12 3.8E-17 142.3 13.8 182 299-537 27-217 (359)
166 cd05105 PTKc_PDGFR_alpha Catal 99.4 1.8E-12 4E-17 145.4 14.2 85 446-536 249-333 (400)
167 cd05034 PTKc_Src_like Catalyti 99.4 5.1E-12 1.1E-16 130.9 16.5 181 299-536 12-198 (261)
168 cd06628 STKc_MAPKKK_Byr2_like 99.4 2.7E-12 5.9E-17 133.4 14.4 197 299-537 6-207 (267)
169 cd05037 PTK_Jak_rpt1 Pseudokin 99.4 2E-12 4.3E-17 133.4 13.2 117 408-536 73-200 (259)
170 cd07863 STKc_CDK4 Catalytic do 99.4 1.8E-12 3.9E-17 136.5 13.0 186 299-536 6-201 (288)
171 cd05062 PTKc_IGF-1R Catalytic 99.4 2.8E-12 6.1E-17 134.6 14.2 186 299-536 12-215 (277)
172 cd05097 PTKc_DDR_like Catalyti 99.4 1.9E-12 4.1E-17 137.5 13.0 185 299-537 11-226 (295)
173 cd05059 PTKc_Tec_like Catalyti 99.4 3.2E-12 6.9E-17 132.6 14.4 183 299-536 10-195 (256)
174 cd06623 PKc_MAPKK_plant_like C 99.4 3.8E-12 8.2E-17 131.4 14.7 182 299-537 7-195 (264)
175 cd05054 PTKc_VEGFR Catalytic d 99.4 2.7E-12 5.9E-17 140.2 14.3 86 445-536 184-269 (337)
176 cd06646 STKc_MAP4K5 Catalytic 99.4 4.5E-12 9.8E-17 131.9 15.4 181 299-536 15-203 (267)
177 cd05609 STKc_MAST Catalytic do 99.4 2.2E-12 4.8E-17 137.8 13.1 189 299-536 7-210 (305)
178 cd05071 PTKc_Src Catalytic dom 99.4 3.9E-12 8.5E-17 132.8 14.6 181 299-536 12-197 (262)
179 cd05151 ChoK Choline Kinase (C 99.4 5.6E-12 1.2E-16 122.8 14.6 132 298-488 3-139 (170)
180 cd05606 STKc_beta_ARK Catalyti 99.4 4E-12 8.7E-17 134.2 14.7 183 300-536 1-190 (278)
181 PHA03211 serine/threonine kina 99.4 1.2E-12 2.7E-17 149.5 11.6 178 299-536 175-356 (461)
182 PF07714 Pkinase_Tyr: Protein 99.4 1.1E-12 2.3E-17 137.3 10.1 186 299-536 5-199 (259)
183 cd05083 PTKc_Chk Catalytic dom 99.4 3.3E-12 7E-17 132.2 13.6 177 299-536 12-191 (254)
184 cd08223 STKc_Nek4 Catalytic do 99.4 5.4E-12 1.2E-16 130.2 15.2 186 299-536 6-196 (257)
185 cd05061 PTKc_InsR Catalytic do 99.4 4E-12 8.7E-17 134.5 14.5 186 299-536 12-215 (288)
186 cd08228 STKc_Nek6 Catalytic do 99.4 8.2E-12 1.8E-16 129.8 16.5 186 299-536 8-200 (267)
187 KOG0198 MEKK and related serin 99.4 1.5E-12 3.2E-17 141.1 11.1 183 299-534 23-214 (313)
188 cd06654 STKc_PAK1 Catalytic do 99.4 3.3E-12 7.1E-17 136.3 13.7 182 299-537 26-211 (296)
189 cd08224 STKc_Nek6_Nek7 Catalyt 99.4 5.8E-12 1.2E-16 130.5 15.1 187 299-537 8-201 (267)
190 cd06637 STKc_TNIK Catalytic do 99.4 3.1E-12 6.6E-17 133.4 13.1 193 288-537 3-211 (272)
191 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.4 4.1E-12 8.9E-17 132.8 14.1 183 300-536 2-203 (269)
192 cd05106 PTKc_CSF-1R Catalytic 99.4 2.7E-12 5.9E-17 142.3 13.4 86 445-536 223-308 (374)
193 cd06644 STKc_STK10_LOK Catalyt 99.4 3.3E-12 7.3E-17 135.2 13.5 182 299-536 18-209 (292)
194 cd06645 STKc_MAP4K3 Catalytic 99.4 4.8E-12 1E-16 131.8 14.4 182 299-536 15-203 (267)
195 cd05065 PTKc_EphR_B Catalytic 99.4 3.2E-12 7E-17 133.4 13.2 188 299-536 10-205 (269)
196 PHA03212 serine/threonine kina 99.4 2E-12 4.3E-17 144.6 12.3 176 299-537 98-278 (391)
197 cd05069 PTKc_Yes Catalytic dom 99.4 5.4E-12 1.2E-16 131.2 14.8 182 299-536 12-197 (260)
198 cd05057 PTKc_EGFR_like Catalyt 99.4 3.8E-12 8.3E-17 133.7 13.7 185 299-536 13-205 (279)
199 PHA02988 hypothetical protein; 99.4 6.9E-12 1.5E-16 133.3 15.7 183 297-537 24-217 (283)
200 cd05088 PTKc_Tie2 Catalytic do 99.4 7.1E-12 1.5E-16 134.1 15.9 182 299-536 13-217 (303)
201 cd05581 STKc_PDK1 Catalytic do 99.4 3.1E-12 6.7E-17 133.3 12.8 190 299-536 7-216 (280)
202 KOG0197 Tyrosine kinases [Sign 99.4 1.6E-12 3.5E-17 145.5 11.2 183 300-537 213-399 (468)
203 KOG4721 Serine/threonine prote 99.4 1.5E-12 3.3E-17 145.6 10.8 175 299-537 130-306 (904)
204 cd06611 STKc_SLK_like Catalyti 99.4 7.7E-12 1.7E-16 131.3 15.6 182 299-536 11-202 (280)
205 cd08219 STKc_Nek3 Catalytic do 99.4 5.3E-12 1.2E-16 130.5 14.2 184 299-536 6-194 (255)
206 cd05067 PTKc_Lck_Blk Catalytic 99.4 6.1E-12 1.3E-16 130.6 14.6 182 299-536 12-197 (260)
207 cd05066 PTKc_EphR_A Catalytic 99.4 3.9E-12 8.4E-17 132.8 13.2 187 299-536 10-203 (267)
208 cd05035 PTKc_Axl_like Catalyti 99.4 6.5E-12 1.4E-16 130.6 14.8 122 410-537 82-210 (273)
209 cd05113 PTKc_Btk_Bmx Catalytic 99.4 5.6E-12 1.2E-16 131.1 14.3 181 299-536 10-195 (256)
210 cd06659 STKc_PAK6 Catalytic do 99.4 6.2E-12 1.3E-16 134.3 15.0 179 300-536 28-211 (297)
211 cd05611 STKc_Rim15_like Cataly 99.4 8.9E-12 1.9E-16 129.2 15.7 180 299-536 2-187 (260)
212 cd05146 RIO3_euk RIO kinase fa 99.4 9.9E-12 2.1E-16 126.6 15.5 164 299-491 3-179 (197)
213 cd06643 STKc_SLK Catalytic dom 99.4 8.6E-12 1.9E-16 131.3 15.6 182 299-536 11-202 (282)
214 cd08229 STKc_Nek7 Catalytic do 99.4 5.6E-12 1.2E-16 131.0 14.0 186 299-537 8-201 (267)
215 cd06658 STKc_PAK5 Catalytic do 99.4 2.5E-12 5.4E-17 137.1 11.6 180 299-536 28-212 (292)
216 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.4 5E-12 1.1E-16 133.1 13.8 186 299-537 10-205 (283)
217 cd06624 STKc_ASK Catalytic dom 99.4 7.5E-12 1.6E-16 130.5 14.9 185 299-537 14-206 (268)
218 cd05052 PTKc_Abl Catalytic dom 99.4 7.4E-12 1.6E-16 130.4 14.7 183 299-536 12-199 (263)
219 cd05101 PTKc_FGFR2 Catalytic d 99.4 5E-12 1.1E-16 134.9 13.7 186 299-536 21-233 (304)
220 cd05095 PTKc_DDR2 Catalytic do 99.4 5.1E-12 1.1E-16 134.3 13.7 187 299-537 11-227 (296)
221 KOG1163 Casein kinase (serine/ 99.4 3E-12 6.5E-17 131.3 11.3 137 299-487 21-165 (341)
222 cd06615 PKc_MEK Catalytic doma 99.4 9.3E-12 2E-16 133.5 15.7 182 299-537 7-193 (308)
223 PHA03209 serine/threonine kina 99.4 2.7E-12 5.9E-17 141.2 11.8 176 299-537 72-251 (357)
224 PTZ00284 protein kinase; Provi 99.4 2.7E-12 5.8E-17 146.4 12.1 185 299-537 135-340 (467)
225 cd05578 STKc_Yank1 Catalytic d 99.4 6.6E-12 1.4E-16 130.1 13.8 182 299-536 6-193 (258)
226 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.4 5.2E-12 1.1E-16 133.2 13.3 119 407-535 88-214 (274)
227 cd05075 PTKc_Axl Catalytic dom 99.4 5.5E-12 1.2E-16 131.5 13.3 188 299-536 5-208 (272)
228 PRK09605 bifunctional UGMP fam 99.4 7E-12 1.5E-16 145.8 15.5 143 297-488 337-479 (535)
229 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.4 5E-12 1.1E-16 133.0 12.8 187 299-537 10-206 (284)
230 cd05036 PTKc_ALK_LTK Catalytic 99.4 7.8E-12 1.7E-16 131.4 14.3 186 299-536 12-215 (277)
231 cd07847 STKc_CDKL1_4 Catalytic 99.4 7.4E-12 1.6E-16 131.3 14.0 184 299-536 7-195 (286)
232 cd05042 PTKc_Aatyk Catalytic d 99.4 1.2E-11 2.6E-16 129.1 15.4 183 300-536 2-203 (269)
233 cd05038 PTKc_Jak_rpt2 Catalyti 99.4 5.3E-12 1.2E-16 132.0 12.8 186 299-537 10-207 (284)
234 cd06632 STKc_MEKK1_plant Catal 99.4 1.3E-11 2.7E-16 127.1 15.3 187 298-536 5-196 (258)
235 cd06613 STKc_MAP4K3_like Catal 99.4 1.1E-11 2.4E-16 128.1 14.9 183 299-537 9-199 (262)
236 cd06620 PKc_MAPKK_Byr1_like Ca 99.4 1E-11 2.2E-16 131.0 14.9 181 299-536 11-196 (284)
237 cd05091 PTKc_Ror2 Catalytic do 99.4 9E-12 2E-16 131.0 14.5 186 299-536 11-220 (283)
238 cd07873 STKc_PCTAIRE1 Catalyti 99.3 5.2E-12 1.1E-16 134.6 12.6 182 299-536 12-199 (301)
239 cd06606 STKc_MAPKKK Catalytic 99.3 1.5E-11 3.2E-16 125.6 15.4 187 299-537 6-198 (260)
240 cd05579 STKc_MAST_like Catalyt 99.3 1.2E-11 2.6E-16 127.4 14.8 127 407-536 65-195 (265)
241 cd05577 STKc_GRK Catalytic dom 99.3 8.2E-12 1.8E-16 131.3 13.8 182 301-536 1-188 (277)
242 cd05574 STKc_phototropin_like 99.3 8.4E-12 1.8E-16 133.7 14.1 190 299-536 7-226 (316)
243 cd05073 PTKc_Hck Catalytic dom 99.3 1.2E-11 2.6E-16 128.6 14.9 182 299-536 12-197 (260)
244 cd07853 STKc_NLK Catalytic dom 99.3 3.3E-12 7.1E-17 140.9 11.2 186 299-537 6-200 (372)
245 cd05111 PTK_HER3 Pseudokinase 99.3 7.3E-12 1.6E-16 132.1 13.3 123 408-536 81-205 (279)
246 cd05060 PTKc_Syk_like Catalyti 99.3 1.6E-11 3.4E-16 127.3 15.6 182 300-536 2-192 (257)
247 cd06609 STKc_MST3_like Catalyt 99.3 9.7E-12 2.1E-16 130.1 14.1 183 299-537 7-193 (274)
248 cd05098 PTKc_FGFR1 Catalytic d 99.3 8.5E-12 1.9E-16 133.4 13.9 186 299-536 24-236 (307)
249 cd06610 STKc_OSR1_SPAK Catalyt 99.3 1.2E-11 2.7E-16 127.8 14.7 187 299-537 7-202 (267)
250 cd07880 STKc_p38gamma_MAPK12 C 99.3 4E-12 8.8E-17 138.8 11.5 198 281-536 2-210 (343)
251 cd05047 PTKc_Tie Catalytic dom 99.3 1.5E-11 3.1E-16 128.9 15.2 182 299-536 1-205 (270)
252 cd05051 PTKc_DDR Catalytic dom 99.3 9.9E-12 2.1E-16 131.4 14.1 124 407-536 91-226 (296)
253 cd06614 STKc_PAK Catalytic dom 99.3 1.4E-11 3.1E-16 129.9 15.2 182 299-537 25-211 (286)
254 cd06655 STKc_PAK2 Catalytic do 99.3 8.1E-12 1.7E-16 133.4 13.4 182 299-537 25-210 (296)
255 cd05044 PTKc_c-ros Catalytic d 99.3 6.4E-12 1.4E-16 130.7 12.4 185 300-536 2-207 (269)
256 cd06648 STKc_PAK_II Catalytic 99.3 1.8E-11 4E-16 129.6 16.0 182 299-537 25-210 (285)
257 cd05077 PTK_Jak1_rpt1 Pseudoki 99.3 1.2E-11 2.6E-16 129.4 14.4 118 407-536 76-203 (262)
258 cd05572 STKc_cGK_PKG Catalytic 99.3 1.6E-11 3.4E-16 127.5 15.1 182 301-536 1-186 (262)
259 cd08215 STKc_Nek Catalytic dom 99.3 2E-11 4.3E-16 125.0 15.6 185 299-536 6-197 (258)
260 cd08221 STKc_Nek9 Catalytic do 99.3 2E-11 4.3E-16 126.1 15.7 185 299-536 6-195 (256)
261 cd05089 PTKc_Tie1 Catalytic do 99.3 1.3E-11 2.8E-16 131.5 14.6 183 299-536 8-212 (297)
262 cd07832 STKc_CCRK Catalytic do 99.3 6.4E-12 1.4E-16 131.7 12.2 184 299-536 6-195 (286)
263 PHA03207 serine/threonine kina 99.3 3.9E-12 8.5E-17 141.8 11.0 178 299-537 98-282 (392)
264 KOG1095 Protein tyrosine kinas 99.3 4.9E-12 1.1E-16 152.6 12.2 186 299-537 698-899 (1025)
265 cd06621 PKc_MAPKK_Pek1_like Ca 99.3 2E-11 4.4E-16 129.1 15.6 183 299-537 7-198 (287)
266 cd06630 STKc_MEKK1 Catalytic d 99.3 1.5E-11 3.3E-16 127.6 14.3 194 299-537 6-203 (268)
267 cd05032 PTKc_InsR_like Catalyt 99.3 1.3E-11 2.9E-16 128.9 13.9 184 299-536 12-215 (277)
268 cd05058 PTKc_Met_Ron Catalytic 99.3 1.2E-11 2.5E-16 128.3 13.3 127 406-536 68-196 (262)
269 PLN03225 Serine/threonine-prot 99.3 8.8E-12 1.9E-16 145.9 13.7 124 407-536 207-373 (566)
270 KOG0588 Serine/threonine prote 99.3 9.7E-12 2.1E-16 141.8 13.3 183 299-536 18-206 (786)
271 cd06617 PKc_MKK3_6 Catalytic d 99.3 1.7E-11 3.6E-16 128.6 14.4 183 299-537 7-202 (283)
272 cd08220 STKc_Nek8 Catalytic do 99.3 1.8E-11 4E-16 125.9 14.3 185 299-536 6-195 (256)
273 cd06622 PKc_MAPKK_PBS2_like Ca 99.3 1.2E-11 2.6E-16 130.3 13.1 180 299-536 7-201 (286)
274 cd05116 PTKc_Syk Catalytic dom 99.3 1.5E-11 3.2E-16 127.8 13.6 185 300-536 2-192 (257)
275 KOG0580 Serine/threonine prote 99.3 1.8E-12 4E-17 132.8 6.6 188 294-537 22-217 (281)
276 cd07844 STKc_PCTAIRE_like Cata 99.3 9E-12 2E-16 131.5 12.1 184 299-537 11-199 (291)
277 cd05055 PTKc_PDGFR Catalytic d 99.3 1.2E-11 2.6E-16 132.5 13.2 186 299-536 41-237 (302)
278 cd05110 PTKc_HER4 Catalytic do 99.3 8.9E-12 1.9E-16 133.2 12.2 184 299-536 13-205 (303)
279 cd05050 PTKc_Musk Catalytic do 99.3 1.6E-11 3.5E-16 129.6 14.0 186 299-536 11-226 (288)
280 cd05613 STKc_MSK1_N N-terminal 99.3 1.7E-11 3.6E-16 129.6 14.0 188 299-536 6-202 (290)
281 cd05107 PTKc_PDGFR_beta Cataly 99.3 1.6E-11 3.5E-16 138.0 14.7 85 446-536 251-335 (401)
282 cd05583 STKc_MSK_N N-terminal 99.3 2.2E-11 4.7E-16 128.6 14.8 188 299-536 6-202 (288)
283 cd07868 STKc_CDK8 Catalytic do 99.3 1.6E-11 3.5E-16 131.6 14.0 189 297-537 5-211 (317)
284 KOG0658 Glycogen synthase kina 99.3 1.7E-12 3.7E-17 139.8 6.3 181 297-537 28-221 (364)
285 cd06636 STKc_MAP4K4_6 Catalyti 99.3 1E-11 2.3E-16 130.5 12.1 182 299-537 22-221 (282)
286 cd05148 PTKc_Srm_Brk Catalytic 99.3 1.6E-11 3.5E-16 127.2 13.3 183 299-536 12-198 (261)
287 cd05099 PTKc_FGFR4 Catalytic d 99.3 2.1E-11 4.6E-16 130.9 14.7 185 299-536 18-230 (314)
288 cd07850 STKc_JNK Catalytic dom 99.3 2.6E-11 5.6E-16 132.7 15.5 189 292-537 14-212 (353)
289 cd06607 STKc_TAO Catalytic dom 99.3 2.6E-11 5.7E-16 129.7 15.1 182 299-537 21-209 (307)
290 cd06633 STKc_TAO3 Catalytic do 99.3 4.7E-11 1E-15 128.5 17.1 193 285-536 15-214 (313)
291 PHA03390 pk1 serine/threonine- 99.3 3.3E-11 7.1E-16 126.6 15.5 118 407-537 81-201 (267)
292 PF06176 WaaY: Lipopolysacchar 99.3 3.1E-11 6.6E-16 124.4 14.7 99 378-486 83-184 (229)
293 cd06638 STKc_myosinIIIA Cataly 99.3 1.7E-11 3.8E-16 128.8 13.4 181 299-536 24-223 (286)
294 cd05045 PTKc_RET Catalytic dom 99.3 2E-11 4.3E-16 129.2 13.7 185 299-536 6-223 (290)
295 cd06634 STKc_TAO2 Catalytic do 99.3 5.7E-11 1.2E-15 127.4 17.5 193 285-536 9-208 (308)
296 cd06639 STKc_myosinIIIB Cataly 99.3 3.2E-11 6.9E-16 127.5 15.3 183 299-536 28-227 (291)
297 cd07839 STKc_CDK5 Catalytic do 99.3 7.6E-12 1.6E-16 131.5 10.4 184 299-537 6-195 (284)
298 cd06652 STKc_MEKK2 Catalytic d 99.3 2.5E-11 5.4E-16 126.4 14.2 188 299-536 8-203 (265)
299 cd07841 STKc_CDK7 Catalytic do 99.3 1.8E-11 3.8E-16 129.8 13.2 188 299-537 6-198 (298)
300 cd07870 STKc_PFTAIRE2 Catalyti 99.3 1.3E-11 2.7E-16 130.6 12.0 185 298-537 10-199 (291)
301 cd05094 PTKc_TrkC Catalytic do 99.3 1.3E-11 2.9E-16 130.8 12.2 185 299-536 11-219 (291)
302 cd06626 STKc_MEKK4 Catalytic d 99.3 2.2E-11 4.8E-16 125.9 13.5 189 299-537 6-201 (264)
303 KOG0611 Predicted serine/threo 99.3 1.3E-11 2.8E-16 133.8 11.8 183 299-536 59-247 (668)
304 PTZ00036 glycogen synthase kin 99.3 1.6E-11 3.5E-16 139.3 13.4 120 410-538 142-267 (440)
305 cd05120 APH_ChoK_like Aminogly 99.3 3E-11 6.6E-16 112.9 13.0 133 299-488 4-141 (155)
306 cd08217 STKc_Nek2 Catalytic do 99.3 2.9E-11 6.2E-16 124.5 14.0 184 299-537 6-205 (265)
307 cd07861 STKc_CDK1_euk Catalyti 99.3 1.5E-11 3.3E-16 129.0 12.0 184 299-537 6-197 (285)
308 cd05056 PTKc_FAK Catalytic dom 99.3 3.5E-11 7.5E-16 125.7 14.6 184 299-536 12-202 (270)
309 cd07836 STKc_Pho85 Catalytic d 99.3 2.2E-11 4.8E-16 127.7 13.2 184 299-537 6-196 (284)
310 PRK12274 serine/threonine prot 99.3 2.6E-11 5.7E-16 124.5 13.2 158 299-515 8-166 (218)
311 KOG0610 Putative serine/threon 99.3 2.3E-11 4.9E-16 132.8 13.2 140 299-486 83-229 (459)
312 cd05053 PTKc_FGFR Catalytic do 99.3 2.9E-11 6.2E-16 127.8 13.8 186 299-536 18-228 (293)
313 cd07867 STKc_CDC2L6 Catalytic 99.3 2.3E-11 5.1E-16 130.0 13.2 189 297-537 5-211 (317)
314 cd05123 STKc_AGC Catalytic dom 99.3 3.7E-11 8.1E-16 123.2 14.1 182 301-537 1-188 (250)
315 KOG1989 ARK protein kinase fam 99.3 1.7E-11 3.7E-16 143.9 13.0 191 299-535 43-251 (738)
316 cd06647 STKc_PAK_I Catalytic d 99.3 2.6E-11 5.6E-16 129.2 13.4 182 299-537 25-210 (293)
317 KOG0589 Serine/threonine prote 99.3 5.3E-12 1.2E-16 140.7 8.2 185 299-536 10-200 (426)
318 cd06608 STKc_myosinIII_like Ca 99.3 7.5E-11 1.6E-15 122.3 16.3 182 299-537 12-213 (275)
319 cd07843 STKc_CDC2L1 Catalytic 99.3 2.7E-11 5.8E-16 128.2 13.0 183 299-536 11-201 (293)
320 COG3642 Mn2+-dependent serine/ 99.3 8E-11 1.7E-15 117.7 15.2 139 299-485 2-140 (204)
321 cd05093 PTKc_TrkB Catalytic do 99.3 3.3E-11 7.1E-16 127.6 13.4 185 299-536 11-216 (288)
322 cd06653 STKc_MEKK3_like_1 Cata 99.3 5E-11 1.1E-15 124.2 14.5 191 299-536 8-203 (264)
323 cd07879 STKc_p38delta_MAPK13 C 99.3 2.3E-11 4.9E-16 132.7 12.4 194 284-536 5-209 (342)
324 cd08218 STKc_Nek1 Catalytic do 99.3 9.2E-11 2E-15 121.1 16.2 184 299-536 6-195 (256)
325 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.3 1.8E-11 3.9E-16 127.3 11.0 118 407-536 71-199 (258)
326 cd07840 STKc_CDK9_like Catalyt 99.3 2.1E-11 4.5E-16 127.5 11.5 187 299-537 5-197 (287)
327 cd06651 STKc_MEKK3 Catalytic d 99.3 5.5E-11 1.2E-15 124.1 14.7 191 299-537 8-204 (266)
328 cd07833 STKc_CDKL Catalytic do 99.3 2.4E-11 5.1E-16 127.6 11.9 185 299-536 7-196 (288)
329 cd07837 STKc_CdkB_plant Cataly 99.3 3.9E-11 8.4E-16 126.8 13.6 186 299-536 7-206 (295)
330 PHA02882 putative serine/threo 99.3 2.4E-11 5.2E-16 129.6 12.0 138 395-536 81-227 (294)
331 cd07846 STKc_CDKL2_3 Catalytic 99.3 2.7E-11 5.8E-16 127.2 12.1 184 299-536 7-195 (286)
332 cd05092 PTKc_TrkA Catalytic do 99.3 3.5E-11 7.7E-16 126.8 12.9 185 299-536 11-218 (280)
333 cd08227 PK_STRAD_alpha Pseudok 99.3 5.2E-11 1.1E-15 128.8 14.5 191 300-537 5-205 (327)
334 cd08530 STKc_CNK2-like Catalyt 99.3 6.7E-11 1.4E-15 121.6 14.4 182 299-536 6-195 (256)
335 KOG0194 Protein tyrosine kinas 99.3 1.4E-11 3.1E-16 139.4 10.2 184 299-535 163-355 (474)
336 smart00220 S_TKc Serine/Threon 99.3 5.4E-11 1.2E-15 119.8 13.2 176 305-536 1-180 (244)
337 KOG0196 Tyrosine kinase, EPH ( 99.3 6.8E-12 1.5E-16 144.8 7.2 213 265-530 603-822 (996)
338 cd05100 PTKc_FGFR3 Catalytic d 99.2 5.6E-11 1.2E-15 129.0 13.9 186 299-536 18-230 (334)
339 cd07877 STKc_p38alpha_MAPK14 C 99.2 3.5E-11 7.5E-16 131.6 12.2 190 289-536 12-212 (345)
340 PLN00009 cyclin-dependent kina 99.2 7E-11 1.5E-15 125.1 14.1 186 299-537 8-199 (294)
341 cd07851 STKc_p38 Catalytic dom 99.2 5.5E-11 1.2E-15 129.8 13.7 199 284-537 5-211 (343)
342 cd07831 STKc_MOK Catalytic dom 99.2 7.4E-11 1.6E-15 123.4 14.1 182 299-536 5-193 (282)
343 smart00221 STYKc Protein kinas 99.2 1.1E-10 2.3E-15 117.0 14.6 185 299-536 5-194 (225)
344 cd07864 STKc_CDK12 Catalytic d 99.2 4.1E-11 8.8E-16 127.1 12.1 186 299-536 13-212 (302)
345 cd05610 STKc_MASTL Catalytic d 99.2 5.3E-11 1.1E-15 142.1 14.3 143 299-488 10-156 (669)
346 cd07845 STKc_CDK10 Catalytic d 99.2 5.5E-11 1.2E-15 127.2 12.8 186 299-537 13-204 (309)
347 cd07860 STKc_CDK2_3 Catalytic 99.2 2.1E-11 4.5E-16 128.1 9.2 185 299-537 6-196 (284)
348 cd07865 STKc_CDK9 Catalytic do 99.2 5.7E-11 1.2E-15 126.0 12.5 190 299-537 18-219 (310)
349 COG1718 RIO1 Serine/threonine 99.2 4.2E-10 9.1E-15 117.3 18.4 184 300-519 55-242 (268)
350 cd05118 STKc_CMGC Catalytic do 99.2 9.3E-11 2E-15 122.6 13.8 185 299-537 5-194 (283)
351 cd08528 STKc_Nek10 Catalytic d 99.2 7.7E-11 1.7E-15 122.8 13.0 194 299-537 6-208 (269)
352 PTZ00266 NIMA-related protein 99.2 1.1E-10 2.4E-15 142.2 15.6 188 299-537 19-238 (1021)
353 cd08225 STKc_Nek5 Catalytic do 99.2 1.2E-10 2.6E-15 120.0 13.5 186 299-536 6-196 (257)
354 cd06616 PKc_MKK4 Catalytic dom 99.2 1.4E-10 3E-15 122.3 14.2 181 299-536 10-204 (288)
355 cd05086 PTKc_Aatyk2 Catalytic 99.2 1.6E-10 3.4E-15 121.2 14.5 123 408-536 68-202 (268)
356 cd07830 STKc_MAK_like Catalyti 99.2 8.5E-11 1.8E-15 123.2 12.5 184 299-537 5-194 (283)
357 cd05043 PTK_Ryk Pseudokinase d 99.2 1.3E-10 2.9E-15 121.9 13.9 186 299-536 12-213 (280)
358 cd07866 STKc_BUR1 Catalytic do 99.2 4.2E-11 9.1E-16 127.1 10.1 192 299-537 14-222 (311)
359 cd06618 PKc_MKK7 Catalytic dom 99.2 1.4E-10 3.1E-15 123.2 13.9 184 299-537 21-213 (296)
360 PRK10345 hypothetical protein; 99.2 1.4E-10 3E-15 119.5 13.1 142 298-486 7-159 (210)
361 PHA03210 serine/threonine kina 99.2 5.9E-11 1.3E-15 137.0 11.6 148 376-537 209-363 (501)
362 KOG3653 Transforming growth fa 99.2 6.3E-11 1.4E-15 131.1 10.8 177 299-530 216-404 (534)
363 cd07838 STKc_CDK4_6_like Catal 99.2 2.6E-10 5.7E-15 119.4 15.2 188 299-537 5-201 (287)
364 cd05046 PTK_CCK4 Pseudokinase 99.2 1.8E-10 3.9E-15 120.4 13.8 183 299-536 11-212 (275)
365 cd05074 PTKc_Tyro3 Catalytic d 99.2 1.9E-10 4.2E-15 119.9 13.7 185 299-536 5-209 (273)
366 cd07857 STKc_MPK1 Catalytic do 99.2 1.1E-10 2.4E-15 126.5 12.3 186 299-536 6-204 (332)
367 cd07829 STKc_CDK_like Catalyti 99.2 1.8E-10 3.9E-15 120.3 13.3 184 299-537 5-194 (282)
368 PLN03224 probable serine/threo 99.2 1.7E-10 3.6E-15 133.2 13.9 79 408-488 258-361 (507)
369 KOG1094 Discoidin domain recep 99.2 4.8E-11 1E-15 134.3 9.1 187 299-538 544-735 (807)
370 cd07835 STKc_CDK1_like Catalyt 99.2 1E-10 2.2E-15 122.8 10.3 185 299-537 5-195 (283)
371 cd07849 STKc_ERK1_2_like Catal 99.2 8.7E-11 1.9E-15 127.6 10.0 186 299-537 11-205 (336)
372 cd08226 PK_STRAD_beta Pseudoki 99.1 3.4E-10 7.4E-15 122.5 13.8 187 303-537 10-205 (328)
373 cd05576 STKc_RPK118_like Catal 99.1 2.1E-10 4.5E-15 118.3 11.5 118 408-537 58-177 (237)
374 PRK01723 3-deoxy-D-manno-octul 99.1 1E-09 2.2E-14 115.2 16.1 149 299-488 37-194 (239)
375 cd08216 PK_STRAD Pseudokinase 99.1 5.7E-10 1.2E-14 119.3 14.5 128 407-536 71-204 (314)
376 cd07834 STKc_MAPK Catalytic do 99.1 1.4E-10 2.9E-15 125.2 9.7 185 299-536 6-201 (330)
377 KOG0587 Traf2- and Nck-interac 99.1 3.2E-10 6.9E-15 132.9 13.1 162 299-515 25-196 (953)
378 cd08222 STKc_Nek11 Catalytic d 99.1 3.5E-10 7.6E-15 117.3 11.9 121 407-536 74-199 (260)
379 KOG0199 ACK and related non-re 99.1 7.1E-11 1.5E-15 135.0 6.9 186 299-536 116-309 (1039)
380 cd07856 STKc_Sty1_Hog1 Catalyt 99.1 3.2E-10 7E-15 123.2 11.7 181 299-537 16-201 (328)
381 KOG4645 MAPKKK (MAP kinase kin 99.1 2.6E-11 5.6E-16 146.4 3.2 184 299-533 1241-1432(1509)
382 cd07858 STKc_TEY_MAPK_plant Ca 99.1 3.9E-10 8.6E-15 122.6 11.6 184 299-536 11-203 (337)
383 cd07852 STKc_MAPK15 Catalytic 99.1 4.2E-10 9.2E-15 122.1 11.8 189 299-537 13-208 (337)
384 cd07855 STKc_ERK5 Catalytic do 99.1 4.1E-10 8.9E-15 122.2 11.3 188 299-536 11-206 (334)
385 cd07842 STKc_CDK8_like Catalyt 99.1 6.6E-10 1.4E-14 118.4 12.3 193 299-537 6-211 (316)
386 PTZ00024 cyclin-dependent prot 99.1 4.2E-10 9.1E-15 121.9 10.5 201 299-537 15-229 (335)
387 cd07854 STKc_MAPK4_6 Catalytic 99.1 6.8E-10 1.5E-14 121.1 11.9 121 409-536 90-213 (342)
388 KOG0664 Nemo-like MAPK-related 99.1 1.2E-10 2.5E-15 121.3 5.2 87 445-537 167-253 (449)
389 KOG0690 Serine/threonine prote 99.1 5.8E-10 1.3E-14 118.5 10.0 191 294-537 168-363 (516)
390 KOG1164 Casein kinase (serine/ 99.1 1.5E-09 3.3E-14 118.3 13.7 186 298-529 23-224 (322)
391 KOG0586 Serine/threonine prote 99.0 5.1E-10 1.1E-14 127.3 10.0 182 299-537 62-250 (596)
392 KOG1035 eIF-2alpha kinase GCN2 99.0 1.6E-10 3.4E-15 139.1 6.1 129 410-541 671-817 (1351)
393 KOG0599 Phosphorylase kinase g 99.0 6.1E-10 1.3E-14 116.1 9.3 197 291-537 14-223 (411)
394 KOG0607 MAP kinase-interacting 99.0 6.9E-10 1.5E-14 117.8 9.5 189 298-541 83-290 (463)
395 KOG1166 Mitotic checkpoint ser 99.0 9.7E-10 2.1E-14 132.9 11.8 140 299-486 704-851 (974)
396 COG0478 RIO-like serine/threon 99.0 4.7E-09 1E-13 110.6 14.7 180 299-518 97-277 (304)
397 PLN00113 leucine-rich repeat r 99.0 1.8E-09 3.8E-14 133.8 13.8 170 299-537 696-873 (968)
398 KOG0986 G protein-coupled rece 99.0 2.9E-09 6.2E-14 117.5 13.5 186 299-538 191-382 (591)
399 KOG1167 Serine/threonine prote 99.0 8.1E-10 1.8E-14 121.0 8.9 163 251-488 13-185 (418)
400 KOG0696 Serine/threonine prote 99.0 2.7E-10 5.8E-15 123.9 4.9 186 299-537 355-545 (683)
401 KOG0603 Ribosomal protein S6 k 99.0 9E-10 2E-14 125.9 9.3 122 407-539 388-510 (612)
402 KOG0984 Mitogen-activated prot 99.0 1.1E-09 2.4E-14 110.5 8.4 172 300-531 53-241 (282)
403 KOG4717 Serine/threonine prote 99.0 2.8E-09 6.1E-14 118.7 12.2 183 299-536 24-213 (864)
404 KOG1165 Casein kinase (serine/ 99.0 2.7E-09 5.8E-14 114.1 10.8 142 299-491 34-185 (449)
405 KOG1006 Mitogen-activated prot 99.0 5.6E-10 1.2E-14 116.2 5.2 139 299-489 70-221 (361)
406 KOG0668 Casein kinase II, alph 98.9 7.8E-10 1.7E-14 113.0 5.6 225 299-602 44-274 (338)
407 KOG0579 Ste20-like serine/thre 98.9 1.2E-09 2.6E-14 123.7 7.4 101 406-514 100-202 (1187)
408 KOG3087 Serine/threonine prote 98.9 2E-08 4.3E-13 100.5 14.5 148 297-484 11-164 (229)
409 KOG2052 Activin A type IB rece 98.9 3.1E-09 6.7E-14 117.1 9.6 169 299-518 217-396 (513)
410 KOG0596 Dual specificity; seri 98.9 5.1E-09 1.1E-13 117.9 10.9 183 299-536 367-566 (677)
411 KOG0695 Serine/threonine prote 98.9 4.4E-09 9.6E-14 112.1 9.9 241 293-613 249-495 (593)
412 KOG0662 Cyclin-dependent kinas 98.9 1.6E-09 3.4E-14 107.2 5.9 141 299-490 8-155 (292)
413 KOG0670 U4/U6-associated splic 98.9 7.9E-09 1.7E-13 115.5 12.0 173 300-535 439-628 (752)
414 KOG1026 Nerve growth factor re 98.9 2.1E-09 4.6E-14 126.3 6.7 184 299-535 492-698 (774)
415 KOG0983 Mitogen-activated prot 98.9 4E-09 8.7E-14 110.3 7.8 73 434-515 188-264 (391)
416 KOG1027 Serine/threonine prote 98.9 5E-09 1.1E-13 122.6 9.5 180 298-536 514-708 (903)
417 PRK15123 lipopolysaccharide co 98.9 4.8E-08 1E-12 104.4 16.3 104 376-485 74-194 (268)
418 cd05154 ACAD10_11_like Acyl-Co 98.9 1.8E-08 3.9E-13 101.9 11.8 146 297-488 2-209 (223)
419 KOG1025 Epidermal growth facto 98.8 7.7E-09 1.7E-13 120.5 8.6 185 298-536 701-894 (1177)
420 KOG0033 Ca2+/calmodulin-depend 98.8 1.7E-09 3.7E-14 111.5 1.7 188 299-539 17-209 (355)
421 KOG4279 Serine/threonine prote 98.8 2.7E-08 5.8E-13 114.2 11.0 176 299-530 581-766 (1226)
422 KOG0614 cGMP-dependent protein 98.8 4.7E-09 1E-13 117.0 4.8 145 369-536 465-613 (732)
423 KOG1151 Tousled-like protein k 98.7 9.4E-08 2E-12 105.2 12.0 189 299-532 469-674 (775)
424 KOG1152 Signal transduction se 98.7 4.7E-08 1E-12 110.7 9.9 184 299-531 567-758 (772)
425 KOG0576 Mitogen-activated prot 98.7 6.1E-09 1.3E-13 119.3 2.8 173 299-529 21-202 (829)
426 KOG0604 MAP kinase-activated p 98.7 1.2E-08 2.7E-13 107.8 4.7 187 297-540 66-261 (400)
427 KOG4257 Focal adhesion tyrosin 98.6 1.1E-07 2.3E-12 108.5 10.5 183 299-536 395-586 (974)
428 KOG0666 Cyclin C-dependent kin 98.6 2.4E-08 5.2E-13 106.1 5.0 197 289-536 20-234 (438)
429 KOG2345 Serine/threonine prote 98.6 1.5E-07 3.2E-12 97.7 10.0 128 407-536 95-235 (302)
430 KOG0584 Serine/threonine prote 98.6 1.2E-07 2.5E-12 108.7 10.0 193 286-536 34-237 (632)
431 PF06293 Kdo: Lipopolysacchari 98.6 3.4E-07 7.4E-12 93.8 11.6 105 376-488 57-173 (206)
432 COG0515 SPS1 Serine/threonine 98.5 7.9E-07 1.7E-11 91.0 12.7 184 299-530 6-199 (384)
433 PF01636 APH: Phosphotransfera 98.5 1.3E-06 2.9E-11 88.4 13.7 140 299-488 3-200 (239)
434 KOG0669 Cyclin T-dependent kin 98.5 1.9E-08 4.1E-13 104.2 -0.2 186 299-533 23-220 (376)
435 KOG0665 Jun-N-terminal kinase 98.5 5.9E-08 1.3E-12 103.6 3.4 129 397-538 83-213 (369)
436 PRK10593 hypothetical protein; 98.5 6.3E-06 1.4E-10 89.4 18.5 94 275-422 2-100 (297)
437 KOG4278 Protein tyrosine kinas 98.5 2.5E-07 5.5E-12 105.2 7.4 179 299-532 273-456 (1157)
438 cd05150 APH Aminoglycoside 3'- 98.4 8.4E-06 1.8E-10 84.9 17.9 164 300-518 5-226 (244)
439 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 1.6E-06 3.5E-11 90.3 12.3 136 299-488 7-185 (226)
440 KOG0200 Fibroblast/platelet-de 98.4 1.8E-06 3.9E-11 102.4 13.5 180 300-535 303-514 (609)
441 KOG1345 Serine/threonine kinas 98.4 5.9E-07 1.3E-11 94.2 7.9 120 407-531 94-214 (378)
442 PRK05231 homoserine kinase; Pr 98.4 6.4E-06 1.4E-10 89.4 14.8 50 270-325 5-54 (319)
443 KOG2270 Serine/threonine prote 98.3 1.1E-05 2.4E-10 88.5 14.4 188 299-520 150-341 (520)
444 PLN00181 protein SPA1-RELATED; 98.2 7.7E-07 1.7E-11 108.6 4.7 128 409-537 54-210 (793)
445 PRK09550 mtnK methylthioribose 98.2 6.6E-05 1.4E-09 84.7 19.2 111 271-422 6-118 (401)
446 cd05155 APH_ChoK_like_1 Unchar 98.2 3.5E-05 7.6E-10 80.2 15.9 35 452-488 163-197 (235)
447 KOG0671 LAMMER dual specificit 98.2 2.8E-06 6.1E-11 92.8 7.5 180 299-532 95-299 (415)
448 COG2112 Predicted Ser/Thr prot 98.2 1.7E-05 3.6E-10 79.5 12.2 125 299-484 28-154 (201)
449 TIGR02721 ycfN_thiK thiamine k 98.1 0.00011 2.3E-09 77.4 17.3 138 299-489 2-179 (256)
450 PLN02756 S-methyl-5-thioribose 98.1 6.4E-05 1.4E-09 84.7 15.9 110 267-419 4-119 (418)
451 PRK12396 5-methylribose kinase 98.1 5.9E-05 1.3E-09 84.6 14.6 114 267-422 5-120 (409)
452 cd05153 HomoserineK_II Homoser 97.9 5.5E-05 1.2E-09 81.0 11.4 32 453-486 175-206 (296)
453 PF03881 Fructosamin_kin: Fruc 97.9 5.4E-05 1.2E-09 81.9 10.0 94 274-420 2-97 (288)
454 PRK06148 hypothetical protein; 97.9 0.0003 6.5E-09 88.3 17.6 55 265-327 4-59 (1013)
455 KOG2268 Serine/threonine prote 97.8 2.5E-05 5.4E-10 84.6 6.1 162 299-494 98-260 (465)
456 PRK09902 hypothetical protein; 97.8 0.00041 8.9E-09 71.8 14.5 147 296-485 21-179 (216)
457 TIGR00938 thrB_alt homoserine 97.7 0.00031 6.7E-09 76.1 13.2 34 452-487 186-219 (307)
458 cd05157 ETNK_euk Ethanolamine 97.7 0.00035 7.6E-09 72.2 13.0 35 453-488 170-204 (235)
459 PF14531 Kinase-like: Kinase-l 97.7 0.00023 5E-09 76.9 10.9 42 447-490 158-199 (288)
460 PRK06149 hypothetical protein; 97.7 0.00041 9E-09 86.7 14.6 58 262-327 7-64 (972)
461 PLN02876 acyl-CoA dehydrogenas 97.7 0.00042 9E-09 85.3 14.3 107 271-423 17-132 (822)
462 KOG1290 Serine/threonine prote 97.5 0.00053 1.1E-08 77.4 10.6 138 288-469 70-223 (590)
463 TIGR01767 MTRK 5-methylthiorib 97.5 0.0013 2.7E-08 73.3 13.4 83 301-422 3-87 (370)
464 cd05156 ChoK_euk Choline Kinas 97.3 0.001 2.3E-08 71.6 10.0 35 453-488 179-216 (302)
465 COG2334 Putative homoserine ki 97.2 0.0025 5.4E-08 70.4 11.8 29 455-485 199-228 (331)
466 cd05152 MPH2' Macrolide 2'-Pho 97.2 0.0096 2.1E-07 64.1 15.9 35 453-489 185-220 (276)
467 smart00750 KIND kinase non-cat 97.0 0.0016 3.5E-08 63.6 7.5 96 421-537 2-99 (176)
468 PF10707 YrbL-PhoP_reg: PhoP r 97.0 0.01 2.2E-07 61.0 13.2 150 298-479 6-165 (199)
469 PRK11768 serine/threonine prot 97.0 0.0096 2.1E-07 65.4 13.8 31 452-486 195-225 (325)
470 PLN02236 choline kinase 97.0 0.01 2.3E-07 65.8 13.8 35 453-488 200-234 (344)
471 COG3001 Uncharacterized protei 97.0 0.013 2.7E-07 61.5 13.1 96 274-423 2-99 (286)
472 COG3173 Predicted aminoglycosi 96.9 0.0038 8.2E-08 68.5 9.3 35 453-489 198-232 (321)
473 KOG1033 eIF-2alpha kinase PEK/ 96.9 0.00031 6.7E-09 80.0 0.7 124 410-540 331-460 (516)
474 KOG0603 Ribosomal protein S6 k 96.7 0.0016 3.5E-08 75.7 4.9 124 394-532 56-181 (612)
475 KOG1240 Protein kinase contain 96.5 0.00062 1.4E-08 83.0 -0.2 46 436-484 123-168 (1431)
476 PLN02421 phosphotransferase, a 96.4 0.024 5.1E-07 62.6 11.6 34 455-489 184-217 (330)
477 KOG0590 Checkpoint kinase and 96.3 0.004 8.6E-08 74.1 5.2 71 414-487 400-471 (601)
478 KOG4158 BRPK/PTEN-induced prot 96.1 0.0086 1.9E-07 66.5 5.9 75 409-485 317-394 (598)
479 KOG0606 Microtubule-associated 95.4 0.011 2.3E-07 72.6 3.2 91 446-538 155-254 (1205)
480 PF04655 APH_6_hur: Aminoglyco 95.3 0.037 7.9E-07 59.0 6.9 30 299-328 8-38 (253)
481 PF13095 FTA2: Kinetochore Sim 95.0 0.19 4.2E-06 51.9 10.7 25 299-323 43-68 (207)
482 KOG2269 Serine/threonine prote 95.0 0.13 2.9E-06 56.4 9.8 193 292-519 252-459 (531)
483 PRK10271 thiK thiamine kinase; 94.8 0.022 4.8E-07 58.0 3.2 34 453-489 77-110 (188)
484 KOG1024 Receptor-like protein 93.6 0.41 8.8E-06 53.6 10.0 124 407-536 360-492 (563)
485 COG5072 ALK1 Serine/threonine 93.1 0.23 4.9E-06 55.5 7.1 81 395-485 285-370 (488)
486 COG4857 Predicted kinase [Gene 92.9 0.4 8.8E-06 51.7 8.4 49 452-503 227-277 (408)
487 PTZ00384 choline kinase; Provi 92.5 1.7 3.6E-05 49.3 13.3 32 453-487 227-258 (383)
488 PF12260 PIP49_C: Protein-kina 92.2 0.39 8.4E-06 48.9 7.0 86 398-488 21-114 (188)
489 TIGR02906 spore_CotS spore coa 91.7 0.12 2.5E-06 55.7 2.8 31 452-485 186-216 (313)
490 PTZ00296 choline kinase; Provi 91.6 2.2 4.7E-05 49.3 13.1 32 454-488 285-316 (442)
491 PF07914 DUF1679: Protein of u 91.2 3.8 8.2E-05 47.0 14.4 34 455-488 270-306 (414)
492 smart00587 CHK ZnF_C4 abd HLH 90.2 0.22 4.7E-06 50.8 2.9 38 452-489 119-159 (196)
493 KOG0590 Checkpoint kinase and 89.0 0.064 1.4E-06 64.0 -2.3 119 406-529 92-217 (601)
494 PF02958 EcKinase: Ecdysteroid 88.3 0.75 1.6E-05 49.3 5.5 35 454-488 216-253 (294)
495 PF01633 Choline_kinase: Choli 88.0 0.24 5.1E-06 50.7 1.4 35 453-488 143-177 (211)
496 COG0510 ycfN Thiamine kinase a 84.5 0.71 1.5E-05 49.7 2.9 33 454-488 154-186 (269)
497 TIGR02904 spore_ysxE spore coa 83.2 0.62 1.3E-05 50.6 1.8 33 452-486 195-227 (309)
498 KOG1023 Natriuretic peptide re 83.0 3 6.4E-05 48.6 7.2 124 408-538 20-154 (484)
499 cd05124 AFK Actin-Fragmin Kina 78.8 24 0.00051 37.5 11.4 74 407-480 89-172 (238)
500 KOG0601 Cyclin-dependent kinas 77.0 2.4 5.1E-05 49.7 3.9 156 286-489 105-276 (524)
No 1
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-85 Score=746.69 Aligned_cols=387 Identities=43% Similarity=0.772 Sum_probs=368.5
Q ss_pred HHHHHHHHHHHHHHhhCCceeehhhHHhhCccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCccc
Q 004234 221 RRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEP 300 (766)
Q Consensus 221 ~~~~~a~~lr~~le~lGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~P 300 (766)
++...+++|+++|++|||||||+||+||||+|++|++|+++|++|||+|||+|+++++++|++++|.+++++|++|+++|
T Consensus 53 ~~~~~~~rL~~~L~~LGPtfIK~GQ~LStR~Dl~p~e~~~eL~~LQD~vpp~~~~~~~~iie~eLG~~iee~F~eF~~~P 132 (517)
T COG0661 53 LREKRAERLRLALEELGPTFIKLGQILSTRPDLVPPEYAEELAKLQDRVPPFPFEEAERIIEEELGRPIEELFSEFEPEP 132 (517)
T ss_pred HhHhHHHHHHHHHHHhCCchhhhhhHHhcCccccCHHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCCCHHHHHHHcCCCc
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQ 379 (766)
Q Consensus 301 IgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~ 379 (766)
+|+||+||||+|++ +|++|||||||||+++.+..|+.+|+.++++++++.|. +..+++.++++|+.+++..|+||++
T Consensus 133 iAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~--~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 133 IASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPG--GRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred hhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCc--cccCChHHHHHHHHHHHHHHhCHHH
Confidence 99999999999999 69999999999999999999999999999999998774 3468999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccC
Q 004234 380 EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHAD 459 (766)
Q Consensus 380 EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaD 459 (766)
||+|+++|++||++++.|+||+|||+||+++||||||++|++++++..++..|.|++.++..++++|++|++++||||||
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~dgffHaD 290 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLRDGFFHAD 290 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHhcCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Q 004234 460 PHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 539 (766)
Q Consensus 460 pHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~ 539 (766)
||||||+|+. +|+++++||||++++++++|..++++++++.++|++.+++.+.++|.+++..|...+..+++.+++.+
T Consensus 291 pHpGNi~v~~--~g~i~~lDfGi~g~l~~~~r~~l~~~~~a~~~rD~~~v~~~~~~~G~~~~~~~~~~~~~~i~~~~~~~ 368 (517)
T COG0661 291 PHPGNILVRS--DGRIVLLDFGIVGRLDPKFRRYLAELLLAFLNRDYDRVAELHVELGYVPPDTDRDPLAAAIRAVLEPI 368 (517)
T ss_pred CCccceEEec--CCcEEEEcCcceecCCHHHHHHHHHHHHHHHhhCHHHHHHHHHHhCCCCCccchHHHHHHHHHHHHhh
Confidence 9999999996 89999999999999999999999999999999999999999999999999999999999988887765
Q ss_pred HHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHhhhhcccCCCC
Q 004234 540 EERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRF 619 (766)
Q Consensus 540 ~~~l~~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP~~ 619 (766)
. +.++. +++++.+..+++++++++++++|++++++.|++.++||++++|||++
T Consensus 369 ~-------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~r~p~~l~ll~r~~~~vEg~~~~ldp~~ 421 (517)
T COG0661 369 Y-------------------GKPLE--------EISFGEILDKLFEVARRFPMRLPPELVLLQRTLLLVEGVGRQLDPRF 421 (517)
T ss_pred h-------------------CCChh--------hccHHHHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHHHHHhhCccc
Confidence 3 33432 46788999999999999999999999999999999999999999999
Q ss_pred ChHHhHHHHHHHHHHhhhh
Q 004234 620 DITEIAKPYAMELLKFREA 638 (766)
Q Consensus 620 ~i~~~a~P~~~~~l~~~~~ 638 (766)
|++..+.||+.+++..+..
T Consensus 422 ~~~~~a~p~~~~~~~~~~~ 440 (517)
T COG0661 422 NLWAVAQPLLAKWLKKQLS 440 (517)
T ss_pred cHHHHhhHHHHHHHHHhhh
Confidence 9999999999999886654
No 2
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=100.00 E-value=2.4e-84 Score=740.70 Aligned_cols=416 Identities=31% Similarity=0.551 Sum_probs=380.5
Q ss_pred HHHHHHHHHHHhhCCceeehhhHHhhCccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccc
Q 004234 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 303 (766)
Q Consensus 224 ~~a~~lr~~le~lGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgs 303 (766)
..|++||.+|++|||+|||+||+||||+|++|++|+++|++|||+|||+|+++++++++++||.+++++|.+||++|+|+
T Consensus 50 ~~~~rlr~aLe~LGp~fIKlGQ~LStR~DllP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~~Plas 129 (537)
T PRK04750 50 PRGERLRLALEELGPIFVKFGQMLSTRRDLFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDIKPLAS 129 (537)
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHcCcccCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcChhhhcC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEee-c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHH
Q 004234 304 ASLGQVHRARL-K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEA 381 (766)
Q Consensus 304 aSiGQVhrA~l-~-G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA 381 (766)
||+||||+|++ + |++|||||+||++.+.|+.|+++|+.++.+++++.|. ...+++.++++|+.+.+.+|+||.+|+
T Consensus 130 aSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~--~~~l~~~~~v~e~~~~l~~ElD~~~Ea 207 (537)
T PRK04750 130 ASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPD--GRRLKPREVVAEFEKTLHDELDLMREA 207 (537)
T ss_pred CCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcc--cccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence 99999999999 5 9999999999999999999999999999999998875 345789999999999999999999999
Q ss_pred HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCC
Q 004234 382 ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPH 461 (766)
Q Consensus 382 ~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaDpH 461 (766)
+|+.+|+++|.+.+.++||+|||+||+++||||||++|++++++..+...+.+++.+++.+++.|+.|+|++||||+|||
T Consensus 208 ~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpH 287 (537)
T PRK04750 208 ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMH 287 (537)
T ss_pred HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 99999999999999999999999999999999999999999998777788899999999999999999999999999999
Q ss_pred CCcEEEeecCCC----cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 462 PGNIAVDDVNGG----RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 462 PGNILV~~~~~g----~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
||||+++. +| +++++|||+++.+++++|+.+++++.|+.++|++.+++.+.++|.+.+..|...++.++..+++
T Consensus 288 PGNIlv~~--~g~~~~~i~llDFGivg~l~~~~r~~l~~~~~a~~~~D~~~v~~~~~~~g~~~~~~~~~~l~~~i~~~~~ 365 (537)
T PRK04750 288 PGNIFVSY--DPPENPRYIALDFGIVGSLNKEDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTRVEELEFAIRAVCE 365 (537)
T ss_pred hHHeEEec--CCCCCCeEEEEecceEEECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 99999985 55 9999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHhhhhcccCC
Q 004234 538 SFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP 617 (766)
Q Consensus 538 ~~~~~l~~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP 617 (766)
.|. ..|++ +++++.++.++++++++|++++|++++++.|+++++||++++|||
T Consensus 366 ~~~-------------------~~~l~--------~i~~~~~l~~l~~~~r~~~~~ip~~l~ll~ktl~~lEG~~r~LdP 418 (537)
T PRK04750 366 PIF-------------------DKPLA--------EISFGHVLLRLFNTARRFNVEIQPQLVLLQKTLLNVEGLGRQLDP 418 (537)
T ss_pred HHh-------------------CCCcc--------cccHHHHHHHHHHHHHHCCCcccHHHHHHHHHHHHHHHHHHHhCC
Confidence 763 34554 467889999999999999999999999999999999999999999
Q ss_pred CCChHHhHHHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Q 004234 618 RFDITEIAKPYAMELLKFREAGVEVILKDFRNRWDRQTRAFYNLFRQADRVEKLAETIQR 677 (766)
Q Consensus 618 ~~~i~~~a~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~l~~ 677 (766)
+||+++.|+||+++++.++. ++....+.+.+.+..+... +.++|. .+.++++.
T Consensus 419 ~~d~~~~a~p~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~lP~---~l~~~l~~ 471 (537)
T PRK04750 419 QLDLWKTAKPFLERWMKEQV-GPRALVRALKEEAPFWAEK---LPELPR---LVHDSLRQ 471 (537)
T ss_pred CCCHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHH---HHHhHH---HHHHHHHh
Confidence 99999999999999998766 4444555555544433322 233444 55566664
No 3
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=100.00 E-value=2.5e-77 Score=673.65 Aligned_cols=383 Identities=36% Similarity=0.628 Sum_probs=360.2
Q ss_pred HHHHHHHHHHHhhCCceeehhhHHhhCccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccc
Q 004234 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 303 (766)
Q Consensus 224 ~~a~~lr~~le~lGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgs 303 (766)
..|++++++|++|||+|||+||++|||+|++|++||++|++|||++||+|+++++++++++||.+++++|.+||++|+|+
T Consensus 48 ~~~~~l~~~l~~lGp~fiKlGQ~lS~r~dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd~~plas 127 (437)
T TIGR01982 48 SRGERLRLALEELGPTFIKFGQTLSTRADLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFEEKPLAA 127 (437)
T ss_pred cHHHHHHHHHHHcCchhHHHhHHHHhCcccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCCCcceee
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Q 004234 304 ASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAA 382 (766)
Q Consensus 304 aSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~ 382 (766)
||+||||+|++ +|++||||||||++.+.+..|+.+|+.++.+++++.|.. ..+++.++++|+...+.+|+||.+||+
T Consensus 128 aSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~--~~~~~~~~~~e~~~~l~~Eldf~~Ea~ 205 (437)
T TIGR01982 128 ASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDS--RRLRPTEVVKEFEKTLRRELDLRREAA 205 (437)
T ss_pred eehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccc--cccCHHHHHHHHHHHHHHHHCHHHHHH
Confidence 99999999999 799999999999999999999999999999999987653 356899999999999999999999999
Q ss_pred HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 004234 383 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHP 462 (766)
Q Consensus 383 Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaDpHP 462 (766)
|+.+|++++++.+.+++|++|+++|++++|||||++|.+++++......+.++..++..++..++.|+|.+|+||+||||
T Consensus 206 n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hP 285 (437)
T TIGR01982 206 NASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHP 285 (437)
T ss_pred HHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCc
Confidence 99999999999999999999999999999999999999999987666666788899999999999999999999999999
Q ss_pred CcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004234 463 GNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEER 542 (766)
Q Consensus 463 GNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~~~ 542 (766)
|||++++ +|+++++|||+++.++++.+..+.+++.++..+|++.+++.+.++|...+..|...+..++..+++.|.
T Consensus 286 gNilv~~--~g~i~liDfG~~~~l~~~~r~~l~~l~~a~~~~D~~~l~~~l~~~g~~~~~~d~~~~~~~~~~~~~~~~-- 361 (437)
T TIGR01982 286 GNIFVLK--DGKIIALDFGIVGRLSEEDRRYLAEILYGFLNRDYRRVAEVHFDAGYVPSDTDMAEFEQAIRAIGEPIF-- 361 (437)
T ss_pred ccEEECC--CCcEEEEeCCCeeECCHHHHHHHHHHHHHHHhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHh--
Confidence 9999975 899999999999999999999999999999999999999999999999999999999999988887763
Q ss_pred HHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHhhhhcccCCCCChH
Q 004234 543 LAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDIT 622 (766)
Q Consensus 543 l~~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP~~~i~ 622 (766)
+.++. +.++++++.++++++++|++++|++|+++.|+++++||+++.|||+||++
T Consensus 362 -----------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~r~l~~leg~~~~L~p~~~~~ 416 (437)
T TIGR01982 362 -----------------GQPLK--------EISVGRLLAGLFKITRDFNMELQPQLLLLQKTLLTVEGVGRQLDPDLNMW 416 (437)
T ss_pred -----------------CCChh--------hCCHHHHHHHHHHHHHHCCccCCHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 12322 35677889999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhh
Q 004234 623 EIAKPYAMELLKFRE 637 (766)
Q Consensus 623 ~~a~P~~~~~l~~~~ 637 (766)
++++||+.+++..+.
T Consensus 417 ~~~~p~~~~~~~~~~ 431 (437)
T TIGR01982 417 KVAEPFVKRWIRKRL 431 (437)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999987654
No 4
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-67 Score=595.65 Aligned_cols=383 Identities=42% Similarity=0.638 Sum_probs=318.1
Q ss_pred HHHHHHHHHHHhhCCceeehhhHHhhCccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccc
Q 004234 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAA 303 (766)
Q Consensus 224 ~~a~~lr~~le~lGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgs 303 (766)
..|++|+++++.|||+|||+||.+|||+|++|+||.++|+.|||++||+|++++.+++++|+|.+++++|.+||++|||+
T Consensus 92 ~~a~~L~e~~~~nGg~yIKlGQ~lst~~dllP~Eyv~~L~~LqD~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~~~piaa 171 (538)
T KOG1235|consen 92 SAAERLLELFLRNGGTYIKLGQHLSTRPDLLPKEYVKTLSELQDQAPPFPWEEAFKIFEEELGAPIEDIFSEFDEEPIAA 171 (538)
T ss_pred HHHHHHHHHHHHcCCeEEEechhhccccccCcHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHHHHhcCcchhhh
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Q 004234 304 ASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAA 382 (766)
Q Consensus 304 aSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~ 382 (766)
||+||||+|++ +|+.|||||||||+++.+..|+.+++.++.+++++.|. +++..+++|+.+.+.+|+||.+||+
T Consensus 172 ASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~-----~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 172 ASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPD-----FDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred cchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcC-----CchhhHHHHHHhhhHhhcchHHHHH
Confidence 99999999999 79999999999999999999999999999999999886 4699999999999999999999999
Q ss_pred HHHHHHHhcCCCC---ccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccC
Q 004234 383 NAELFASNFKDMD---YVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHAD 459 (766)
Q Consensus 383 Nl~~f~~~f~~~~---~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaD 459 (766)
|+++|+++|++.+ .|+||+|||++|+++|||||||+|++++|+..++..|+++..++..+.++|++|||.+||||||
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~~GffHaD 326 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFKTGFFHAD 326 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHhcCCccCC
Confidence 9999999999988 7999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEeec--CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 460 PHPGNIAVDDV--NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 460 pHPGNILV~~~--~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
||||||+|++. .+++++++|||+++.+++..|..|++++++++..|...|.+...++|... +.+...+..++.. +.
T Consensus 327 PHPGNilv~~~~~~~~~ivllDhGl~~~is~~~r~~~~~~~~a~~~~d~~~~~~~~~~~g~~~-d~~~~~fa~~l~~-~~ 404 (538)
T KOG1235|consen 327 PHPGNILVRPNPEGDEEIVLLDHGLYAVISHKTRKDYAELWLALVFEDEKAMQALAEQLGLGL-DDLYPLFATALTG-RP 404 (538)
T ss_pred CCCCcEEEecCCCCCccEEEEcccccccccHHHHHHHHHHHHHHhcccHHHHHHHHHHhcccc-chhhhhhHHHHhC-Cc
Confidence 99999999952 36789999999999999999999999999999977777777777777654 3333333322211 00
Q ss_pred HHHHHHH-HHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHhhhhcccC
Q 004234 538 SFEERLA-AQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLD 616 (766)
Q Consensus 538 ~~~~~l~-~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~Ld 616 (766)
+..... .+.+. + ....++... ......+.+..+...+. ++|..+.++.|+...+.|+...+.
T Consensus 405 -~~s~~~~~~~~~---------~--~~~~~~~~~-~~~~~~~~~~~~~~~L~----~~p~~i~li~k~~~l~r~~~~~l~ 467 (538)
T KOG1235|consen 405 -WDSVIGAGITKY---------L--KGLEEDADE-NQKIASAKFPGISQLLR----RMPREILLILKTNDLLRGLSSNLG 467 (538)
T ss_pred -hhhccccchhhh---------h--hhhhhhhhh-HHHHHHHHhhHHHHHHH----hchHhhhhhcccHHHHHhHHHHhc
Confidence 000000 00000 0 000000011 11222333334443333 359999999999999888887775
Q ss_pred CC----CChHHhHHHHHH
Q 004234 617 PR----FDITEIAKPYAM 630 (766)
Q Consensus 617 P~----~~i~~~a~P~~~ 630 (766)
-. +++...++..+.
T Consensus 468 ~~~~~~~~f~~~~~~~~~ 485 (538)
T KOG1235|consen 468 IPSSLERSFLEMARLCLR 485 (538)
T ss_pred cccccchHHHHHHHHHHH
Confidence 44 455566666655
No 5
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=100.00 E-value=4e-54 Score=462.38 Aligned_cols=377 Identities=24% Similarity=0.377 Sum_probs=334.1
Q ss_pred HHHHHHHHHHHhhCCceeehhhHHhhCccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCC-ChhhhhhccCccccc
Q 004234 224 ALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGA-PLDDVFERFDVEPIA 302 (766)
Q Consensus 224 ~~a~~lr~~le~lGptfIKlGQ~lStR~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~-~~eeiF~~fd~~PIg 302 (766)
-+.+.|..+||..||||||+|||+|||+|++|+++|.+|++|+.+|+|+++...++.+..++|. .++++|.+|+++|||
T Consensus 119 lW~~~L~kaLE~aGPtFIKLGQWAsTR~DlFs~afC~qLSKLHs~vt~Hs~a~T~k~l~qa~~~~~~~eiF~efn~~PIG 198 (565)
T KOG1236|consen 119 LWLRLLLKALETAGPTFIKLGQWASTRRDLFSKAFCAQLSKLHSNVTPHSFAFTKKKLRQAFGVKKIEEIFSEFNREPIG 198 (565)
T ss_pred HHHHHHHHHHHhcCCceEEecccccccccccCHHHHHHHHHHhccCCCCchHHHHHHHHHHHCcCcHHHHHHhcCCcccc
Confidence 4578899999999999999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred ccceeEEEEEeec-----------------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004234 303 AASLGQVHRARLK-----------------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (766)
Q Consensus 303 saSiGQVhrA~l~-----------------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~ 365 (766)
+|||||||+|+++ .+.|||||.+|+++++|+.|+.||+..|++.+.+ |.. .-.++...++
T Consensus 199 sG~IAQVY~atl~~a~lekd~~~~~~~~~~tq~~AiKv~Hp~V~~~ir~Dl~Il~f~Akl~~~v-P~l--~wL~l~~~vk 275 (565)
T KOG1236|consen 199 SGCIAQVYRATLKTAYLEKDSGKEYVQKLGTQSCAIKVLHPNVEKQIRLDLGILGFGAKLINNV-PDL--SWLSLPLEVK 275 (565)
T ss_pred cchhhhhhhhhhhHHHhhcccchhhhcCCccceeeeeccCccHHHHHHHHHHHHhhhhhhhhhc-Ccc--ccccCcchHH
Confidence 9999999999861 1479999999999999999999999999999854 331 2345677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC-CHHHHHHHHHH
Q 004234 366 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV-DRKRLGRYAVE 444 (766)
Q Consensus 366 E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~-d~~~la~~lv~ 444 (766)
.|.-.+..++|.++||.|+.+|..||+....|.+|+++..+.++.||+-+|.+|.++.....-..... -.++++..+++
T Consensus 276 qF~v~ln~QvdL~~EA~hL~rF~~NF~~s~~V~fP~P~~~~~~~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~ 355 (565)
T KOG1236|consen 276 QFSVGLNAQVDLRQEALHLPRFTNNFSGSKKVLFPKPIAPLHTDLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVN 355 (565)
T ss_pred HHHHHHHhhcchhhhhhhhHHHHHhcccceeecCCcccccccccceeeeeccccccHHhhhhcccChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998654322211 35678888999
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCC-----------------------------------------CcEEEEeecce
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNG-----------------------------------------GRLIFYDFGMM 483 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~-----------------------------------------g~l~LiDFGlv 483 (766)
++++|++.++|+|+|+|||||++...++ .+++++|-|++
T Consensus 356 AllkMl~vDNFvHaDlHPGNVlirf~~t~~~~~~~~~~e~~~~i~~~L~~~~~e~~d~~~~~~~~~~~~P~lvflDtGiv 435 (565)
T KOG1236|consen 356 ALLKMLIVDNFVHADLHPGNVLIRFNKTEDNLRGVHKAEKASAIKRGLEWFRSEVRDARFTDSPDLEYEPTLVFLDTGIV 435 (565)
T ss_pred HHHHHHHhhcceecccCCCcEEEEecCCCccccccccchhhhHHhhhhhhhhhhhhhhhhhccccccCCCeEEEecchhh
Confidence 9999999999999999999999975434 57999999999
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCC
Q 004234 484 GSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPL 563 (766)
Q Consensus 484 ~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~~~l~~~r~~~~~~~~~~~f~~~l 563 (766)
..+++.++.++..+|.|+++.|...+.+.+++........|.+.|.+.++.++..... +
T Consensus 436 ~kLs~qn~~N~l~lF~av~~~~Gy~ag~lml~~Sr~q~~~d~e~F~~kvEklv~~~~s------------t--------- 494 (565)
T KOG1236|consen 436 TKLSHQNQMNLLSLFRAVARFDGYDAGELMLERSRQQQCIDPERFARKVEKLVLKARS------------T--------- 494 (565)
T ss_pred hccChhhHHHHHHHHHHHHHhcchhHHHHHHhhcccccCCCHHHHHHHHHHHHHHhhh------------h---------
Confidence 9999999999999999999999999999999987777778999998888877765421 0
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHhhhhcccCCCCChHHhHHHHH
Q 004234 564 SKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA 629 (766)
Q Consensus 564 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lEGi~~~LdP~~~i~~~a~P~~ 629 (766)
.+.+..++++++.++++++++|++++.++|+.++-+++++||++++|||++|++....+|+
T Consensus 495 -----~sl~tl~i~~ll~em~tmvreH~V~ids~f~tvvlsilvlEG~gRqLdP~lDl~~~~~~~l 555 (565)
T KOG1236|consen 495 -----KSLRTLNIGDLLSEMFTMVREHHVRIDSNFTTVVLSILVLEGFGRQLDPDLDLFQLRTFLL 555 (565)
T ss_pred -----cccCcCcHHHHHHHHHHHHHHhheeeccchHHHHHHHHHHhhhccccCCCcchhhhHHHHH
Confidence 0112457899999999999999999999999999999999999999999999999444443
No 6
>KOG1234 consensus ABC (ATP binding cassette) 1 protein [General function prediction only]
Probab=100.00 E-value=3.7e-35 Score=302.34 Aligned_cols=349 Identities=24% Similarity=0.317 Sum_probs=287.3
Q ss_pred HhhC-ccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEe
Q 004234 247 FSTR-VDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQ 324 (766)
Q Consensus 247 lStR-~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVq 324 (766)
||-+ ..++|+...+.|++.++.+..||..++.+++..++|.+|.+-|++||..|.+++|+||||+|++ +|.+||||+|
T Consensus 2 LSiQD~~ll~p~l~qi~erVrqsAd~MP~~Ql~~vm~~~lG~nW~~Kf~~fd~~P~AaASIGQVHrArl~~g~eVavKiQ 81 (363)
T KOG1234|consen 2 LSIQDGSLLPPTLGQILERVRQSADFMPPKQLEPVMWGELGGNWAQKFSSFDDGPFAAASIGQVHRARLADGPEVAVKIQ 81 (363)
T ss_pred cccccCCccCHHHHHHHHHhcCccccCChhhhhHHHhhhhchhHHHHHHhhccCccccccHHHHHHHHhcCCCeeeeecC
Confidence 3444 3589999999999999999999999999999999999999999999999999999999999999 7999999999
Q ss_pred cCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee
Q 004234 325 RPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW 404 (766)
Q Consensus 325 rP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~ 404 (766)
+||+.+.|+.|+..+..++++-.- .|+. .-+...++-.++.+..|+||.+||..+.+|+..+++++.++||.|+.
T Consensus 82 YPGva~sI~SD~~nl~~lLn~s~l-lPkG----LFLd~~i~~ArkEL~~ECDYqrEA~~~~kFr~LLs~~p~f~VP~Vv~ 156 (363)
T KOG1234|consen 82 YPGVARSIDSDANNLSRLLNFSGL-LPKG----LFLDVLIEVARKELKWECDYQREAASALKFRPLLSDDPNFYVPRVVD 156 (363)
T ss_pred CCchhhhccCcHHHHHHHHhhccc-cccc----ccHHHHHHHHHHhcccccchHHHHHHHhhhHHHhcCCCCcchhHHHH
Confidence 999999999999999998876543 3331 12455667778889999999999999999999999999999999999
Q ss_pred ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 405 EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 405 e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
++||.++++||++.|.++.....+.+ ..+..|+..++..+++.||...|++.||+.+|++++. ...+|.|+|||.++
T Consensus 157 Elct~rvlt~el~~G~pid~~~~~sQ--~~rn~i~~~~l~lcLrEif~f~fMQTDPNWsNFly~~-~tk~i~LlDFGAsr 233 (363)
T KOG1234|consen 157 ELCTVRVLTLELGQGLPIDKTAKLSQ--ETRNYIGYKLLELCLREIFEFRFMQTDPNWSNFLYNG-RTKKIELLDFGASR 233 (363)
T ss_pred hhccchhhhhhhhcCccchhhhcccH--HHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHhccCC-CcceEEEEeccccc
Confidence 99999999999999999987644332 3578899999999999999999999999999999985 56789999999999
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCCc
Q 004234 485 SISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLS 564 (766)
Q Consensus 485 ~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~~~l~~~r~~~~~~~~~~~f~~~l~ 564 (766)
.+++++...|++++.+...+|.+.+.+--.++|+++... ...-.| ...+.... ..+.-.....++|++
T Consensus 234 ~y~~~F~d~Y~~~~~aaa~~dr~~v~e~S~~lgfLtg~E--s~~m~D------AHv~sv~i-lgepfa~~~pydF~~--- 301 (363)
T KOG1234|consen 234 EYGEKFIDKYIRLLKAAADRDREGVIEMSRELGFLTGYE--SKVMED------AHVESVMI-LGEPFASDGPYDFGD--- 301 (363)
T ss_pred cccHHHHHHHHHHHHHHHhcchHHHHHHHHHhcccccch--HHHHHH------HhhhHhhh-ccccccCCCCcCcCc---
Confidence 999999999999999999999999999999999987532 211111 11111000 000000112334433
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCc-hhhhhhhhhhhHhhhhcccCCCCChHHh
Q 004234 565 KEEKIEKKKQRLAAIGEDLLAIAADQPFRFPA-TFTFVVRAFSVLDGIGKGLDPRFDITEI 624 (766)
Q Consensus 565 ~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~-~~~ll~Ral~~lEGi~~~LdP~~~i~~~ 624 (766)
+.+..-+.+++.++.+|++..|| +-..+.|-+...-=+|..|...+.-.+.
T Consensus 302 ---------q~~t~ri~~lipvmL~hRL~pPPeEtYsLHRklsG~fL~cakl~A~v~C~~l 353 (363)
T KOG1234|consen 302 ---------QTVTDRIQNLIPVMLRHRLCPPPEETYSLHRKLSGAFLLCAKLGATVPCRDL 353 (363)
T ss_pred ---------cHHHHHHHhhhHHHHhccCCCCcHHHHHHHHHhhhHHHHHHHhcCCCcHHHH
Confidence 34455567778888899998876 7778999998888888888887765443
No 7
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=99.94 E-value=3.5e-27 Score=221.30 Aligned_cols=118 Identities=49% Similarity=0.820 Sum_probs=112.8
Q ss_pred HHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchH
Q 004234 283 EELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWV 361 (766)
Q Consensus 283 ~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~ 361 (766)
++||.+++++|++||++|+||||+||||+|++ +|++||||||||++.+.+..|+.+|+.++++++++.+.. .+++.
T Consensus 1 e~lG~~~~~~F~~fd~~PlasASiaQVh~a~l~~g~~VaVKV~rP~i~~~i~~Dl~~l~~~~~~~~~~~~~~---~~~~~ 77 (119)
T PF03109_consen 1 EELGKPIDEIFDEFDPEPLASASIAQVHRARLKDGEEVAVKVQRPGIEEQIEADLRILRRLARLLERLPPFR---RLDLE 77 (119)
T ss_pred CCcCCCHHHHHHHCCcchhhheehhhheeeeecccchhhhhhcchHHHHHHHHHHHHHHHHHHHHHHccccc---ccCHH
Confidence 47999999999999999999999999999999 799999999999999999999999999999999887643 67999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceee
Q 004234 362 AIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIF 403 (766)
Q Consensus 362 ~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~ 403 (766)
.+++|+.+.+.+|+||++||+|+++|+++|.+.+.|+||+||
T Consensus 78 ~~~~e~~~~l~~ElDf~~Ea~n~~~~~~~~~~~~~v~vP~vy 119 (119)
T PF03109_consen 78 EIVDEFRDSLLEELDFRREAANLERFRKNFADSPRVYVPKVY 119 (119)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCEecCCCC
Confidence 999999999999999999999999999999999999999987
No 8
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.4e-19 Score=177.42 Aligned_cols=180 Identities=17% Similarity=0.177 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.+||+|++|+||+|++ +|+.||||+.+|+.... ..+.+.+.....+... ....++..+..+ .+
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---------~~ 66 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSF-KDRDKYIEGDPRFRSR------YSKSNPRKLVFA---------WA 66 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceE-eeHHHHhcCCcccccc------cccCCHHHHHHH---------HH
Confidence 5899999999999999 69999999999985432 1111111100000000 001223332222 23
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCH---HHHHHHHHHHHHHHHHh-C
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAVESYLEQILS-H 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~---~~la~~lv~~~l~qI~~-~ 453 (766)
..|.+|+.++.. +++.+|.++.. ...+|||||++|..+.... +.....+. ..++..++.. +.++|. .
T Consensus 67 ~~E~~~l~~l~~-----~~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~-l~~~~~~~~~~~~i~~~l~~~-l~~lH~~~ 137 (190)
T cd05145 67 EKEFRNLKRLYE-----AGVPVPEPILL--KKNVLVMEFIGDDGSPAPR-LKDVPLEEEEAEELYEQVVEQ-MRRLYQEA 137 (190)
T ss_pred HHHHHHHHHHHh-----CCCCCceEEEe--cCCEEEEEEecCCCchhhh-hhhccCCHHHHHHHHHHHHHH-HHHHHHhC
Confidence 578889988864 46778888853 4569999999998544321 22223332 3344444433 667777 9
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 513 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l 513 (766)
|++|+||||+||+++ +++++|+|||++..++... ..+++.+|++.+...+
T Consensus 138 givHrDlkP~NIll~---~~~~~liDFG~a~~~~~~~-------~~~~~~~~~~~~~~~~ 187 (190)
T cd05145 138 GLVHGDLSEYNILYH---DGKPYIIDVSQAVELDHPN-------ALEFLRRDIRNINRFF 187 (190)
T ss_pred CEecCCCChhhEEEE---CCCEEEEEcccceecCCCC-------HHHHHHHHHHHHHHHh
Confidence 999999999999997 6889999999999987652 2445667877776654
No 9
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.78 E-value=4.3e-18 Score=172.07 Aligned_cols=164 Identities=15% Similarity=0.153 Sum_probs=108.8
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
..||+|++|+||+|.+ +|++||||+.+|+.......| ..+....++-. . ....++..+..++ .
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~-~~~~~~~~~~~-~-----~~~~~~~~~~~~~---------~ 66 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRD-RYVSGEFRFRH-G-----YCKSNPRKMVRTW---------A 66 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHH-HhhcCCchhhc-c-----ccCCCHHHHHHHH---------H
Confidence 4799999999999999 799999999998864332222 11100011000 0 0122444443332 2
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH-HhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI-LSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI-~~~G 454 (766)
..|++|+.++.. +++..|.++. +...+|||||++|..+.... +....++...+...+.+ ..+.++ |..|
T Consensus 67 ~~E~~~l~~l~~-----~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~l~H~~g 138 (190)
T cd05147 67 EKEMRNLKRLVT-----AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPR-LKDAPLSESKARELYLQVIQIMRILYQDCR 138 (190)
T ss_pred HHHHHHHHHHHH-----CCCCCCcEEE--ecCCEEEEEEeCCCCCcchh-hhcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468889988864 3455666663 45569999999997665432 22334566666555533 557777 6899
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
++|+||||+||+++ +++++|+|||++...+..
T Consensus 139 iiHrDlkP~NIli~---~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 139 LVHADLSEYNLLYH---DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred cccCCCCHHHEEEE---CCcEEEEEccccccCCCc
Confidence 99999999999997 478999999999876544
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.77 E-value=3.4e-18 Score=185.22 Aligned_cols=186 Identities=18% Similarity=0.194 Sum_probs=132.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.-||+||||.||+|++ +|..||||-..- ..+..+..+.+..|+-
T Consensus 16 ~~iG~GsfavVykg~h~~~~~~VAIK~i~~----------------------------------~~l~~k~~e~L~~Ei~ 61 (429)
T KOG0595|consen 16 REIGSGSFAVVYKGRHKKSGTEVAIKCIAK----------------------------------KKLNKKLVELLLSEIK 61 (429)
T ss_pred hhccCcceEEEEEeEeccCCceEEeeeehh----------------------------------hccCHHHHHHHHHHHH
Confidence 4499999999999999 599999996511 1112334445566666
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l---v~~~l~qI~~~ 453 (766)
+..|.+ +..-|.+-.+. +..+..+||||||+|+.|+++..-. ..+++. .++.. +...++-+++.
T Consensus 62 iLkel~----------H~nIV~l~d~~-~~~~~i~lVMEyC~gGDLs~yi~~~-~~l~e~-t~r~Fm~QLA~alq~L~~~ 128 (429)
T KOG0595|consen 62 ILKELK----------HPNIVRLLDCI-EDDDFIYLVMEYCNGGDLSDYIRRR-GRLPEA-TARHFMQQLASALQFLHEN 128 (429)
T ss_pred HHHhcC----------CcceeeEEEEE-ecCCeEEEEEEeCCCCCHHHHHHHc-CCCCHH-HHHHHHHHHHHHHHHHHHC
Confidence 655553 22223333333 3456789999999999999976432 123322 22222 33457778999
Q ss_pred CccccCCCCCcEEEeec-CC---CcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 454 GFFHADPHPGNIAVDDV-NG---GRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 454 GffHaDpHPGNILV~~~-~~---g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|+|||+||.|||+... .. -.+++.|||+++.+.+.. + ...+.+.+-||++++...+-...+.|++++.
T Consensus 129 ~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~---~----a~tlcGSplYMAPEV~~~~~YdAKADLWSiG 201 (429)
T KOG0595|consen 129 NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS---M----AETLCGSPLYMAPEVIMSQQYDAKADLWSIG 201 (429)
T ss_pred CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh---H----HHHhhCCccccCHHHHHhccccchhhHHHHH
Confidence 99999999999999862 11 469999999999998643 2 3445679999999999998889999999999
Q ss_pred HHHHHHHHH
Q 004234 530 RTAQFFLNS 538 (766)
Q Consensus 530 ~~i~~~l~~ 538 (766)
.++..++..
T Consensus 202 ~Ilyq~l~g 210 (429)
T KOG0595|consen 202 TILYQCLTG 210 (429)
T ss_pred HHHHHHHhC
Confidence 988777643
No 11
>smart00090 RIO RIO-like kinase.
Probab=99.68 E-value=5.2e-16 Score=162.32 Aligned_cols=186 Identities=19% Similarity=0.206 Sum_probs=126.4
Q ss_pred ccccccceeEEEEEe--e-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRAR--L-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~--l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
++||.|++|+||+|+ . +|++||||+.+++..+....+. +... .+.......++... .+.
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~---------~~~ 95 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDR--------YVDG-DFRFKYRKINPRKL---------VRL 95 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhh--------hccc-chhhccCCCCHHHH---------HHH
Confidence 589999999999998 3 6999999999876543211110 0000 00000001122111 123
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHH---HHHHHHHHHHHHHHHh
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK---RLGRYAVESYLEQILS 452 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~---~la~~lv~~~l~qI~~ 452 (766)
.+..|++++.++.. ..+.+|+++.. +..+|||||++|..+..... .....+.. .++..+ ...+.++|.
T Consensus 96 ~~~~E~~~L~~L~~-----~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~-~~~~~~~~~~~~i~~qi-~~~l~~LH~ 166 (237)
T smart00090 96 WAEKEFRNLQRLYE-----AGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL-KDVEPEEEEEFELYDDI-LEEMRKLYK 166 (237)
T ss_pred HHHHHHHHHHHHHh-----cCCCCCeeeEe--cCceEEEEEecCCccccccc-ccCCcchHHHHHHHHHH-HHHHHHHHh
Confidence 46788999998864 25778888853 45799999999988765421 11222222 333333 345888999
Q ss_pred CC-ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004234 453 HG-FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 521 (766)
Q Consensus 453 ~G-ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~ 521 (766)
+| ++|+|+||+||+++ +++++++|||++...+.... .++..+|...+...+.+.|..+.
T Consensus 167 ~g~iiH~Dikp~NIli~---~~~i~LiDFg~a~~~~~~~~-------~~~~~~d~~~~~~~~~~~~~~~~ 226 (237)
T smart00090 167 EGELVHGDLSEYNILVH---DGKVVIIDVSQSVELDHPMA-------LEFLERDIRNIIRFFRRKGVDEL 226 (237)
T ss_pred cCCEEeCCCChhhEEEE---CCCEEEEEChhhhccCCcch-------HHHHHHHHHHHHHHHHHcCCCcC
Confidence 99 99999999999997 67899999999998877654 35578999999999999988543
No 12
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.68 E-value=5.1e-16 Score=161.30 Aligned_cols=143 Identities=18% Similarity=0.327 Sum_probs=104.7
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
++++.|.+|+||.+..++..+|||+.+|..... +.+...+...--|.
T Consensus 37 ~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~---------------------------------~~~~~~f~~g~~~e 83 (232)
T PRK10359 37 KVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRT---------------------------------ERFLKSFVKGDYYE 83 (232)
T ss_pred EEecCCCceEEEEEecCCCcEEEEEechhcCch---------------------------------HHHHHhhhhhHHHH
Confidence 689999999999977778899999998875433 00111111122367
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee--------ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHH
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFW--------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQI 450 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~--------e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI 450 (766)
+||+++.++.+ +++..|..+. .+++..+|+|||++|.+|.++... +. .. ...+...+.++
T Consensus 84 ~Ea~~l~rL~~-----~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~-----~~-~~-~~~i~~~l~~l 151 (232)
T PRK10359 84 NLIVQTDRVRS-----EGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEI-----SE-DV-KAKIKASIESL 151 (232)
T ss_pred HHHHHHHHHHH-----CCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhc-----cH-HH-HHHHHHHHHHH
Confidence 89999998854 4566665552 235679999999999999886432 22 22 22445568999
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
|..|++|+|||||||++++ +| ++|+|||.+.....+
T Consensus 152 H~~gi~H~Dikp~Nili~~--~g-i~liDfg~~~~~~e~ 187 (232)
T PRK10359 152 HQHGMVSGDPHKGNFIVSK--NG-LRIIDLSGKRCTAQR 187 (232)
T ss_pred HHcCCccCCCChHHEEEeC--CC-EEEEECCCcccccch
Confidence 9999999999999999985 67 999999999887543
No 13
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=8.6e-16 Score=155.20 Aligned_cols=170 Identities=22% Similarity=0.319 Sum_probs=115.2
Q ss_pred cccccccceeEEEEEee-cCeeEEEEEecCCccch--HHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDL--FDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~--i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
.++||+|++|+||+|.. +|+.||||+.+++.... ...+.+ .... ....++ .-..+
T Consensus 20 ~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~-------~~~~------~~~~~~---------~~~~~ 77 (198)
T cd05144 20 GNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRD-------YLGD------RKHASW---------LYLSR 77 (198)
T ss_pred CCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHH-------HHhc------cccchh---------HHHhH
Confidence 36899999999999999 79999999987654211 000000 0000 000001 01123
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG 454 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~G 454 (766)
..+..|...+..+.. ..+.+|.++. ....+++|||++|.++.++... .....++..++.. +.++|..|
T Consensus 78 ~~~~~E~~~l~~l~~-----~~i~v~~~~~--~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~-l~~lh~~g 145 (198)
T cd05144 78 LAAQKEFAALKALYE-----EGFPVPKPID--WNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEE-IVKAYKHG 145 (198)
T ss_pred HHHHHHHHHHHHHHH-----cCCCCCceee--cCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHH-HHHHHHCC
Confidence 345666666766644 2356777775 3567999999999998875321 2334455555443 56789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH----HHHHHHHhh
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL----LEAFYGIYE 503 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l----~~l~~a~~~ 503 (766)
++|+|+||+||++++ +++++++|||+++.++.+.++.+ ...++++++
T Consensus 146 i~H~Dl~p~Nill~~--~~~~~liDfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (198)
T cd05144 146 IIHGDLSEFNILVDD--DEKIYIIDWPQMVSTDHPNAEELLDRDVENILRFFR 196 (198)
T ss_pred CCcCCCCcccEEEcC--CCcEEEEECCccccCCCccHHHHHHHHHHHHHHHHh
Confidence 999999999999985 88999999999999999888876 555555543
No 14
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.68 E-value=4.5e-17 Score=175.06 Aligned_cols=177 Identities=17% Similarity=0.216 Sum_probs=127.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||+|+-|.||++++ +|+.+|+|+.+-++. .++.+++.+|++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~-----------------------------------~~~~~Qi~rEl~ 129 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNID-----------------------------------PALQKQILRELE 129 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCC-----------------------------------HHHHHHHHHHHH
Confidence 5799999999999999 599999999843332 335566777777
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCC-CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTT-PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st-~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~ 451 (766)
..++.. ++..|++.|.+ .. ...++||||+|++|+++.... ..++...++..... ..+.++|
T Consensus 130 il~~~~spyIV~~ygaF~~-------------~~~~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh 195 (364)
T KOG0581|consen 130 ILRSCQSPYIVGFYGAFYS-------------NGEEISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLH 195 (364)
T ss_pred HHhhCCCCCeeeEeEEEEe-------------CCceEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHh
Confidence 766552 22222222211 23 478999999999999975321 22333333333222 2367788
Q ss_pred h-CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 452 S-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~-~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
+ ++++|||+||.||||+. .|+++|+|||..+.+... ++..+ .++..||+++-++-+-.+-.+|+++|.-
T Consensus 196 ~~~~IIHRDIKPsNlLvNs--kGeVKicDFGVS~~lvnS----~a~tf----vGT~~YMsPERi~g~~Ys~~sDIWSLGL 265 (364)
T KOG0581|consen 196 EERKIIHRDIKPSNLLVNS--KGEVKICDFGVSGILVNS----IANTF----VGTSAYMSPERISGESYSVKSDIWSLGL 265 (364)
T ss_pred hccCeeeccCCHHHeeecc--CCCEEeccccccHHhhhh----hcccc----cccccccChhhhcCCcCCcccceecccH
Confidence 4 99999999999999996 899999999999998765 44444 4588999999999888888899999986
Q ss_pred HHHH
Q 004234 531 TAQF 534 (766)
Q Consensus 531 ~i~~ 534 (766)
.+-+
T Consensus 266 sllE 269 (364)
T KOG0581|consen 266 SLLE 269 (364)
T ss_pred HHHH
Confidence 5433
No 15
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.67 E-value=6.8e-16 Score=172.04 Aligned_cols=195 Identities=21% Similarity=0.295 Sum_probs=127.7
Q ss_pred ccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 295 RFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 295 ~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+|+. ++||.|+||+||.|+- +|+.+|+|+++. .++--.. + -+.+
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkK-------S~M~~~~-------------------------Q-v~hV 188 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKK-------SEMLKKN-------------------------Q-VEHV 188 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccH-------HHHHhhh-------------------------h-HHHH
Confidence 4654 8999999999999998 599999998732 1110000 0 1122
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YL 447 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l 447 (766)
..|-|.+.| ...-.|.+.|..+. ...||+|||++|+.+..++.. ..-+.....--.+++. .+
T Consensus 189 ~aERdiL~~-------------~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI 254 (550)
T KOG0605|consen 189 RAERDILAE-------------VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAI 254 (550)
T ss_pred HHHHHHhhh-------------cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHH
Confidence 233333332 12233455565444 346999999999998876421 1112222222333443 36
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH---------------------------------
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL--------------------------------- 494 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l--------------------------------- 494 (766)
..||.+|++|+||||.|+||+. .|+++|.|||++.-+....+...
T Consensus 255 ~~iH~~gyIHRDIKPdNlLiD~--~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (550)
T KOG0605|consen 255 ESIHQLGYIHRDIKPDNLLIDA--KGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRRE 332 (550)
T ss_pred HHHHHcCcccccCChhheeecC--CCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHH
Confidence 7899999999999999999996 89999999999865543222111
Q ss_pred -HH--------HHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Q 004234 495 -LE--------AFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 539 (766)
Q Consensus 495 -~~--------l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~ 539 (766)
.+ +.+. .-++|+||+++++.---....+|-+++...+.++|-.|
T Consensus 333 ~~~~w~~nrr~~a~S-tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGy 385 (550)
T KOG0605|consen 333 QLQTWKRNRRQLAYS-TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGY 385 (550)
T ss_pred HHHHHHhhhhhhhhc-ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCC
Confidence 00 1111 24789999999886544567889999999998888766
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.67 E-value=1.5e-15 Score=159.05 Aligned_cols=189 Identities=19% Similarity=0.225 Sum_probs=131.7
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004234 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (766)
Q Consensus 294 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 370 (766)
++|+. ..+|.||||.||..+. +|..+|+|++.- ..+++
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k----------------------------------~~vVk----- 84 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDK----------------------------------QKVVK----- 84 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCH----------------------------------HHHHH-----
Confidence 45554 6899999999999999 599999998721 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHHH
Q 004234 371 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESYL 447 (766)
Q Consensus 371 l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~~~l 447 (766)
+.+.-...+|-+-+.... +|. +-+.++ ...+..+|||||++|+.|..+..- ........+.-..-+-..+
T Consensus 85 lKQveH~~nEk~vL~~v~-----~PF--lv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAl 157 (355)
T KOG0616|consen 85 LKQVEHTHNEKRVLKAVS-----HPF--LVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLAL 157 (355)
T ss_pred HHHHHHHhhHHHHHhhcc-----Cce--eEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHH
Confidence 111111223333222221 111 112221 223567999999999999987532 1222223344444455668
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHH
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 527 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~ 527 (766)
+.+|..++++||+||+|||++. +|.|++.|||.+.+++..+- .+.+++++++++.+...-.....|-++
T Consensus 158 eylH~~~iiYRDLKPENiLlD~--~G~iKitDFGFAK~v~~rT~---------TlCGTPeYLAPEii~sk~ynkavDWWa 226 (355)
T KOG0616|consen 158 EYLHSLDIIYRDLKPENLLLDQ--NGHIKITDFGFAKRVSGRTW---------TLCGTPEYLAPEIIQSKGYNKAVDWWA 226 (355)
T ss_pred HHHHhcCeeeccCChHHeeecc--CCcEEEEeccceEEecCcEE---------EecCCccccChHHhhcCCCCcchhHHH
Confidence 9999999999999999999996 89999999999999987632 246899999999999877788899999
Q ss_pred HHHHHHHHHHHH
Q 004234 528 VRRTAQFFLNSF 539 (766)
Q Consensus 528 l~~~i~~~l~~~ 539 (766)
|...+++|+..|
T Consensus 227 lGVLIYEMlaG~ 238 (355)
T KOG0616|consen 227 LGVLIYEMLAGY 238 (355)
T ss_pred HHHHHHHHHcCC
Confidence 999998888765
No 17
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.65 E-value=1.2e-15 Score=168.79 Aligned_cols=185 Identities=18% Similarity=0.179 Sum_probs=136.1
Q ss_pred cccccceeEEEEEeecCee-EEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARLKGEE-VVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 300 PIgsaSiGQVhrA~l~G~~-VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
-+|+|++|+||+|.++|+. ||||+..+.-... .. +-+|.
T Consensus 48 ~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~-----------------------------~~-----------~~~f~ 87 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDD-----------------------------ES-----------RKAFR 87 (362)
T ss_pred hcccCCceeEEEEEeCCceeEEEEEecchhcCh-----------------------------HH-----------HHHHH
Confidence 3999999999999999998 9999874432111 00 34678
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHHHhCC-
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQILSHG- 454 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--l~qI~~~G- 454 (766)
+|+..+.++ ++..-|.+.-+..+-.....|||||++|++|.++... ....++.......+.+.. +..+|..+
T Consensus 88 ~E~~il~~l----~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~ 163 (362)
T KOG0192|consen 88 REASLLSRL----RHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP 163 (362)
T ss_pred HHHHHHHhC----CCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 888877774 2333344444443222246899999999999998754 355677777766665544 77899999
Q ss_pred ccccCCCCCcEEEeecCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH--cCCCCCCCCHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ--MGVLVPTGDTTAVRRT 531 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g-~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~--lG~~~~~~D~~~l~~~ 531 (766)
++|+|+||.|||++. ++ .++++|||+++...... ....-..+++.+|+|++++ -...+..+|+++|.-.
T Consensus 164 iIHrDLK~~NiLv~~--~~~~~KI~DFGlsr~~~~~~------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv 235 (362)
T KOG0192|consen 164 IIHRDLKSDNILVDL--KGKTLKIADFGLSREKVISK------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV 235 (362)
T ss_pred eeecccChhhEEEcC--CCCEEEECCCccceeecccc------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH
Confidence 999999999999986 66 99999999998776532 0111156889999999999 5577888999999876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+-+++
T Consensus 236 lWEl~ 240 (362)
T KOG0192|consen 236 LWELL 240 (362)
T ss_pred HHHHH
Confidence 65544
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.64 E-value=1e-15 Score=170.66 Aligned_cols=189 Identities=21% Similarity=0.322 Sum_probs=128.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+-+|.|||.+|++|+. .++.+||||.-. +- |+.| +-++
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K----------~~------------------------Iike------~Kvk 118 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDK----------RY------------------------IIKE------KKVK 118 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhH----------HH------------------------HHhh------cccc
Confidence 4699999999999999 599999998711 00 0000 0112
Q ss_pred HH-HHHHHHHHHHHhcCCCCccccceeeecc--CCCeEEEEeecCCCChhhhhhhhhcC-CCHH--HHHHHHHHHHHHHH
Q 004234 377 YT-QEAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDELG-VDRK--RLGRYAVESYLEQI 450 (766)
Q Consensus 377 f~-~EA~Nl~~f~~~f~~~~~V~vP~v~~e~--st~~vLVMEyieG~~L~d~~~l~~~g-~d~~--~la~~lv~~~l~qI 450 (766)
|. .|-..|.++. ++|.| -+.|..+ ....|.|+||++++.|-+++. +.| +|.. +.-...+-..++.|
T Consensus 119 YV~~Ek~~l~~L~----~hPgi--vkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleyl 190 (604)
T KOG0592|consen 119 YVTREKEALTQLS----GHPGI--VKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYL 190 (604)
T ss_pred hhhHHHHHHHHhh----CCCCe--EEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHH
Confidence 22 1222233332 33433 2333322 356799999999999988643 222 3322 11122233447899
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHH-------HHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-------LLEAFYGIYEKDADKVLQAMVQMGVLVPTG 523 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~-------l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~ 523 (766)
|..|++|||+||+|||++. ||+++|.|||.+..+++..... .+.-=.+-+-++.+|+.++++.-+...+..
T Consensus 191 H~~GIIHRDlKPENILLd~--dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~s 268 (604)
T KOG0592|consen 191 HSNGIIHRDLKPENILLDK--DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSS 268 (604)
T ss_pred HhcCceeccCChhheeEcC--CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCccc
Confidence 9999999999999999996 9999999999999998865541 111101223468899999999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFLN 537 (766)
Q Consensus 524 D~~~l~~~i~~~l~ 537 (766)
|+++|...++.|+.
T Consensus 269 DiWAlGCilyQmla 282 (604)
T KOG0592|consen 269 DLWALGCILYQMLA 282 (604)
T ss_pred chHHHHHHHHHHhc
Confidence 99999998887764
No 19
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=2.5e-16 Score=170.67 Aligned_cols=194 Identities=17% Similarity=0.214 Sum_probs=128.3
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.+.+|+|.||.|-.|.- +|+.||||+....--. +. +.....+.
T Consensus 177 ~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~------------------------~~-----------s~~~~~~~ 221 (475)
T KOG0615|consen 177 SKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKST------------------------GC-----------SRAIAKTR 221 (475)
T ss_pred eeeecCCceeEEEEEEEcccCcEEEeeeeehhhcc------------------------cc-----------cccccchh
Confidence 36899999999999998 6999999997321000 00 00112234
Q ss_pred HHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhh-hhhhcCCCHHHHHHHHHHHHHHHHHhC
Q 004234 376 DYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQ-SLDELGVDRKRLGRYAVESYLEQILSH 453 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~-~l~~~g~d~~~la~~lv~~~l~qI~~~ 453 (766)
|..+|..-+.++ ++|+ |.+-..| +-....||||||++|+.|-+.. +....+.+..+..-.-+-..++++|+.
T Consensus 222 ~v~~EieILkkL-----~HP~IV~~~d~f-~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~ 295 (475)
T KOG0615|consen 222 DVQNEIEILKKL-----SHPNIVRIKDFF-EVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ 295 (475)
T ss_pred hhHHHHHHHHhc-----CCCCEEEEeeee-ecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc
Confidence 556777766665 2343 3333333 3345569999999999998843 222222332222222233446789999
Q ss_pred CccccCCCCCcEEEeec-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC---CCCHHHHH
Q 004234 454 GFFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP---TGDTTAVR 529 (766)
Q Consensus 454 GffHaDpHPGNILV~~~-~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~---~~D~~~l~ 529 (766)
|+.|||+||+|||+... .+-.+++.|||+++..... .+.+. ..+++.|++|+.+..+-..- ..|++++.
T Consensus 296 GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~---sfm~T----lCGTpsYvAPEVl~~kg~~~~~~kVDiWSlG 368 (475)
T KOG0615|consen 296 GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG---SFMKT----LCGTPSYVAPEVLASKGVEYYPSKVDIWSLG 368 (475)
T ss_pred CcccccCCcceEEeccCCcceEEEecccchhhccccc---eehhh----hcCCccccChhheecCCeecccchheeeecc
Confidence 99999999999999852 2357999999999988642 23333 45699999999987654443 34888888
Q ss_pred HHHHHHHHHH
Q 004234 530 RTAQFFLNSF 539 (766)
Q Consensus 530 ~~i~~~l~~~ 539 (766)
..+...+..|
T Consensus 369 cvLfvcLsG~ 378 (475)
T KOG0615|consen 369 CVLFVCLSGY 378 (475)
T ss_pred ceEEEEeccC
Confidence 7776666554
No 20
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=1e-14 Score=144.86 Aligned_cols=164 Identities=23% Similarity=0.271 Sum_probs=105.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
++||+|++|+||+|+. +|++||||+.+|+.......+..++ ....... ...++..+. ....
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~---------~~~~ 64 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRT---GDYRFGR------KKSNWRYLS---------RLWA 64 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhH---HHHHhcc------CCcchhhhh---------hHHH
Confidence 5799999999999999 5999999999987654322222111 1111110 111222211 1122
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCC-----hhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIK-----INRIQSLDELGVDRKRLGRYAVESYLEQILS 452 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~-----L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~ 452 (766)
..|.+++.++.. ..+.+|+++. +...+|+|||++|.. +.+... . .....++..+ ...+..+|.
T Consensus 65 ~~e~~~l~~l~~-----~~~~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~~~---~-~~~~~~~~~~-~~~l~~lh~ 132 (187)
T cd05119 65 EKEFRNLKRLYE-----AGVPVPKPID--LNRHVLVMEFIGGDGIPAPRLKDVRL---L-EDPEELYDQI-LELMRKLYR 132 (187)
T ss_pred HHHHHHHHHHHH-----cCCCCCceEe--cCCCEEEEEEeCCCCccChhhhhhhh---c-ccHHHHHHHH-HHHHHHHhh
Confidence 345566666644 2356787774 456799999999943 333211 0 1233333333 334667787
Q ss_pred -CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHH
Q 004234 453 -HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL 495 (766)
Q Consensus 453 -~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~ 495 (766)
.|++|+|+||+||+++ ++.++++|||++...+.+....+.
T Consensus 133 ~~~ivH~Dl~p~Nili~---~~~~~liDfg~a~~~~~~~~~~~~ 173 (187)
T cd05119 133 EAGLVHGDLSEYNILVD---DGKVYIIDVPQAVEIDHPNAEEFL 173 (187)
T ss_pred ccCcCcCCCChhhEEEE---CCcEEEEECcccccccCcchHHHH
Confidence 9999999999999997 688999999999998887666554
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.61 E-value=8.5e-16 Score=169.07 Aligned_cols=184 Identities=17% Similarity=0.234 Sum_probs=128.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+-+|.|+||.||+|+- +|+.||||-++-. .+.|. |+-
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~K-----------------------------f~s~e------------e~~ 54 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKK-----------------------------FYSWE------------ECM 54 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhh-----------------------------hccHH------------HHH
Confidence 4589999999999998 6999999954211 11222 233
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~--l~qI~~~G 454 (766)
=.+|.+.+.++. .+..-|.+-.|+.+-....++|||||+- .|.++...+..-+....+-..+.+.+ +.+||.+|
T Consensus 55 nLREvksL~kln---~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G 130 (538)
T KOG0661|consen 55 NLREVKSLRKLN---PHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG 130 (538)
T ss_pred HHHHHHHHHhcC---CCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 344555444432 2333456666776655578999999984 56666554544455666655555544 88899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
|||||+||+||||.. ...|+|.|||+++.+.... .|.+.+-. -...+-+.+++-|..+...|++++...+.+
T Consensus 131 fFHRDlKPENiLi~~--~~~iKiaDFGLARev~Skp--PYTeYVST----RWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 131 FFHRDLKPENILISG--NDVIKIADFGLAREVRSKP--PYTEYVST----RWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred cccccCChhheEecc--cceeEecccccccccccCC--Ccchhhhc----ccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 999999999999985 5689999999999985432 23333222 234556788899999999999999987665
Q ss_pred H
Q 004234 535 F 535 (766)
Q Consensus 535 ~ 535 (766)
+
T Consensus 203 l 203 (538)
T KOG0661|consen 203 L 203 (538)
T ss_pred H
Confidence 4
No 22
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.60 E-value=2.2e-14 Score=145.21 Aligned_cols=144 Identities=19% Similarity=0.314 Sum_probs=106.2
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
++||+|++|.||+|+..|..|+||+..|.....-..| .. .....+.
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~-----------------------------~~-----~~~~~~~ 47 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELD-----------------------------ER-----IRRERTR 47 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHH-----------------------------HH-----HHHHHHH
Confidence 4789999999999999999999998866543221111 00 1123566
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcccc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 458 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHa 458 (766)
+|++++..+.. +++.+|.++....+..+++|||++|.+|.++..... .....++..+. ..+.++|..|++|+
T Consensus 48 ~E~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~--~~~~~i~~~i~-~~l~~lH~~~i~H~ 119 (211)
T PRK14879 48 REARIMSRARK-----AGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG--MEELELSREIG-RLVGKLHSAGIIHG 119 (211)
T ss_pred HHHHHHHHHHH-----CCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc--HHHHHHHHHHH-HHHHHHHhCCcccC
Confidence 77777777643 458889988766788899999999999998753211 12334444433 46788999999999
Q ss_pred CCCCCcEEEeecCCCcEEEEeecceeccC
Q 004234 459 DPHPGNIAVDDVNGGRLIFYDFGMMGSIS 487 (766)
Q Consensus 459 DpHPGNILV~~~~~g~l~LiDFGlv~~L~ 487 (766)
|+||+||+++ ++.++++|||+++..+
T Consensus 120 Dl~p~Nil~~---~~~~~liDf~~a~~~~ 145 (211)
T PRK14879 120 DLTTSNMILS---GGKIYLIDFGLAEFSK 145 (211)
T ss_pred CCCcccEEEE---CCCEEEEECCcccCCC
Confidence 9999999997 6789999999988754
No 23
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.59 E-value=2.1e-14 Score=150.86 Aligned_cols=183 Identities=17% Similarity=0.213 Sum_probs=125.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|.||+|.||+++. +|+-||||.-.-.-. | ..+.+...+|+.
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-----------------------------d-----~~VkKIAlREIr 53 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-----------------------------D-----PVVKKIALREIR 53 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCc-----------------------------c-----HHHHHHHHHHHH
Confidence 3589999999999999 599999996521100 1 123444566776
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHh
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILS 452 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~--l~qI~~ 452 (766)
+....+ |+..+-+.|+. ..+..||.||||-.-|.++.. -..|.+...+-..+.+.. ++.+|.
T Consensus 54 mLKqLkH~NLVnLiEVFrr-------------krklhLVFE~~dhTvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk 119 (396)
T KOG0593|consen 54 MLKQLKHENLVNLIEVFRR-------------KRKLHLVFEYCDHTVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHK 119 (396)
T ss_pred HHHhcccchHHHHHHHHHh-------------cceeEEEeeecchHHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhh
Confidence 666554 56555555543 345689999999988888764 345677666655554433 566789
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
++++|||+||+|||++. .|.++|+|||.++.++. .-+.|.+.+..-..+.++.++- =--..+..|++++.-.+
T Consensus 120 ~n~IHRDIKPENILit~--~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvG----DtqYG~pVDiWAiGCv~ 192 (396)
T KOG0593|consen 120 NNCIHRDIKPENILITQ--NGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVG----DTQYGKPVDIWAIGCVF 192 (396)
T ss_pred cCeecccCChhheEEec--CCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcc----cCcCCCcccchhhhHHH
Confidence 99999999999999997 89999999999999984 2345666544333343333321 11234567999988765
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 193 aEl~ 196 (396)
T KOG0593|consen 193 AELL 196 (396)
T ss_pred HHHh
Confidence 5544
No 24
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.59 E-value=8.2e-15 Score=161.18 Aligned_cols=190 Identities=18% Similarity=0.176 Sum_probs=123.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+..... -.+... .
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------------------------------~~~~~~------~ 47 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML---------------------------------EKEQVG------H 47 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH---------------------------------HhhHHH------H
Confidence 6799999999999998 5899999987321000 000111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+..|...+.++ +++ .+++.+.. .....+|||||++|+.|.++... ...++...+...+.+ ..+..+|.
T Consensus 48 ~~~E~~il~~~-----~~~--~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~ 119 (363)
T cd05628 48 IRAERDILVEA-----DSL--WVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQ 119 (363)
T ss_pred HHHHHHHHHhC-----CCC--CcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 22333333322 122 23333332 23457999999999999886532 223444443333322 34788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHH-----------------------------HHHHhh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA-----------------------------FYGIYE 503 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l-----------------------------~~a~~~ 503 (766)
.|++|+|+||.||+++. ++.++|+|||++..+....+..+... ......
T Consensus 120 ~givHrDlKp~NILi~~--~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (363)
T cd05628 120 LGFIHRDIKPDNLLLDS--KGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTV 197 (363)
T ss_pred CCeEecCCCHHHeEECC--CCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 99999999999999986 88999999999987654322111000 001124
Q ss_pred cCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 504 KDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 504 ~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
+++.++++++...+......|++++...+.+++.
T Consensus 198 Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~ 231 (363)
T cd05628 198 GTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI 231 (363)
T ss_pred CCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh
Confidence 6788999999877767788999999988776653
No 25
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=9.3e-15 Score=161.89 Aligned_cols=186 Identities=16% Similarity=0.131 Sum_probs=132.0
Q ss_pred hccCc-ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 294 ERFDV-EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 294 ~~fd~-~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..|+. .-||.|+||.||+|.+ +|+.||||...++....
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---------------------------------------- 114 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---------------------------------------- 114 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc----------------------------------------
Confidence 46765 7899999999999999 67999999664332110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCC-CeEEEEeecCCCChhhhhhhhhc-CCCH---HHHHHHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTT-PQILTMEYVPGIKINRIQSLDEL-GVDR---KRLGRYAVESY 446 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st-~~vLVMEyieG~~L~d~~~l~~~-g~d~---~~la~~lv~~~ 446 (766)
+-+|.+|...+.+++ ++++.--.-|....+ +++||+||++.++|.+....... .++. -+||..+++.
T Consensus 115 --~~eF~~Ei~~ls~l~-----H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~g- 186 (361)
T KOG1187|consen 115 --EREFLNEVEILSRLR-----HPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARG- 186 (361)
T ss_pred --hhHHHHHHHHHhcCC-----CcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHH-
Confidence 224777777777664 233322233333334 48999999999999997654333 3333 3444444443
Q ss_pred HHHHHhC---CccccCCCCCcEEEeecCCCcEEEEeecceeccCh-hhHHHHHHHHHHHh-hcCHHHHHHHHHHcCCCCC
Q 004234 447 LEQILSH---GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP-NIREGLLEAFYGIY-EKDADKVLQAMVQMGVLVP 521 (766)
Q Consensus 447 l~qI~~~---GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~-~~r~~l~~l~~a~~-~~D~~~v~~~l~~lG~~~~ 521 (766)
+..+|.. -++|+|+||.|||++. +...++.|||++...+. .... ... .++..++++++...|.++.
T Consensus 187 L~yLH~~~~~~iiHrDiKssNILLD~--~~~aKlsDFGLa~~~~~~~~~~-------~~~~~gt~gY~~PEy~~~g~lt~ 257 (361)
T KOG1187|consen 187 LAYLHEGCPPPIIHRDIKSSNILLDE--DFNAKLSDFGLAKLGPEGDTSV-------STTVMGTFGYLAPEYASTGKLTE 257 (361)
T ss_pred HHHHccCCCCCEecCCCCHHHeeECC--CCCEEccCccCcccCCccccce-------eeecCCCCccCChhhhccCCcCc
Confidence 7777764 3999999999999986 89999999999965544 2111 111 6788899999999999999
Q ss_pred CCCHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFL 536 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l 536 (766)
..|+++|...+.+++
T Consensus 258 KsDVySFGVvllEli 272 (361)
T KOG1187|consen 258 KSDVYSFGVVLLELI 272 (361)
T ss_pred ccccccchHHHHHHH
Confidence 999999998766554
No 26
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.58 E-value=2e-14 Score=147.90 Aligned_cols=185 Identities=19% Similarity=0.208 Sum_probs=124.7
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
++||+|++|.||+|.+ +++.||+|+.++..... .+.++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~-----------------------------------------~~~~~ 39 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE-----------------------------------------LKIKF 39 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHH-----------------------------------------HHHHH
Confidence 3689999999999998 68899999875433211 12245
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
.+|+..+..+ +++++.-+.-+....+..+++|||++|++|.+.........+...+...+.+ ..+..+|..|+
T Consensus 40 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ 114 (250)
T cd05085 40 LSEARILKQY-----DHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNC 114 (250)
T ss_pred HHHHHHHHhC-----CCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 5666655554 2344333332333446789999999999998865433333455554444333 34677899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|+||+++. ++.++++|||++.......... .........++++++...+..+...|++++...+.++
T Consensus 115 ~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~ 187 (250)
T cd05085 115 IHRDLAARNCLVGE--NNVLKISDFGMSRQEDDGIYSS-----SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWET 187 (250)
T ss_pred eecccChheEEEcC--CCeEEECCCccceecccccccc-----CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHH
Confidence 99999999999985 8899999999987654321110 0011123457788888877777888999998776655
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 188 ~ 188 (250)
T cd05085 188 F 188 (250)
T ss_pred h
Confidence 4
No 27
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=7.1e-15 Score=166.14 Aligned_cols=182 Identities=16% Similarity=0.164 Sum_probs=128.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.-||.|+||+||+|+. +|+.||+||.... .|. + ...++.+.+|+.
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~----------~l~-------k----------------~~~reKv~~EIe 70 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKK----------LLK-------K----------------PKQREKVLNEIE 70 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehH----------Hhc-------C----------------cchHHHHHHHHH
Confidence 6799999999999998 5999999997210 000 0 112233444543
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
..+..+ |+..|.+.| |-++..|||.|+|+-.+|..+.. ....++..+....+.+ ..+..+|.
T Consensus 71 IHr~L~HpnIV~f~~~F-------------EDs~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~ 136 (592)
T KOG0575|consen 71 IHRSLKHPNIVQFYHFF-------------EDSNNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHS 136 (592)
T ss_pred HHHhcCCCcEEeeeeEe-------------ecCCceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 333221 333333333 33566789999999999999865 3333444443333322 34778899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChh-hHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN-IREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~-~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
+|++|||+|-||||+++ +.+++|.|||++..+..+ .|. ....+++.|++|+++.-.-.+..+|++++...
T Consensus 137 ~~IiHRDLKLGNlfL~~--~~~VKIgDFGLAt~le~~~Erk-------~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcv 207 (592)
T KOG0575|consen 137 LGIIHRDLKLGNLFLNE--NMNVKIGDFGLATQLEYDGERK-------KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCV 207 (592)
T ss_pred cCceecccchhheeecC--cCcEEecccceeeeecCccccc-------ceecCCCcccChhHhccCCCCCchhhhhhhhH
Confidence 99999999999999986 779999999999999844 443 22468999999999987667778999999988
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
++-+|
T Consensus 208 mYtLL 212 (592)
T KOG0575|consen 208 MYTLL 212 (592)
T ss_pred HHhhh
Confidence 87765
No 28
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.58 E-value=9e-15 Score=157.36 Aligned_cols=191 Identities=18% Similarity=0.208 Sum_probs=127.9
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004234 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (766)
Q Consensus 294 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 370 (766)
+.|+. +.||.||||+|+..+. +|+-+|+||++.. ..+++ .| .+.
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~----------------~iv~~----------------~e-~~~ 71 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKK----------------KIVEK----------------KE-VRH 71 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhh----------------Hhhhh----------------hh-HHH
Confidence 45665 7899999999999998 5999999987321 00000 00 112
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhhhhh-hhhcCCCHHHHHHHHHHHHHH
Q 004234 371 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVESYLE 448 (766)
Q Consensus 371 l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~-l~~~g~d~~~la~~lv~~~l~ 448 (766)
+..| ..-+.+. ++| +.|.-.|. +-..+.+||+||+.|+.|--... ......++.++-..-+-..+.
T Consensus 72 ~~~E------r~IL~~v-----~hP-Fiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~ 139 (357)
T KOG0598|consen 72 TKAE------RNILSKI-----KHP-FIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALG 139 (357)
T ss_pred HHHH------HHHHHhC-----CCC-cEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHH
Confidence 2222 2222221 222 22333332 22356799999999998876432 112223333333333445688
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 527 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~-L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~ 527 (766)
.+|+.|++|||+||+|||++. +|+++|.|||+++. +.......- ..++++||+++++.-.-....+|-++
T Consensus 140 ~LH~~gIiyRDlKPENILLd~--~GHi~LtDFgL~k~~~~~~~~t~t-------fcGT~eYmAPEil~~~gy~~~vDWWs 210 (357)
T KOG0598|consen 140 YLHSKGIIYRDLKPENILLDE--QGHIKLTDFGLCKEDLKDGDATRT-------FCGTPEYMAPEILLGKGYDKAVDWWS 210 (357)
T ss_pred HHHhCCeeeccCCHHHeeecC--CCcEEEeccccchhcccCCCcccc-------ccCCccccChHHHhcCCCCcccchHh
Confidence 999999999999999999996 99999999999984 333222211 45799999999998887888899999
Q ss_pred HHHHHHHHHHH
Q 004234 528 VRRTAQFFLNS 538 (766)
Q Consensus 528 l~~~i~~~l~~ 538 (766)
+...+++++..
T Consensus 211 LGillYeML~G 221 (357)
T KOG0598|consen 211 LGILLYEMLTG 221 (357)
T ss_pred HHHHHHHHhhC
Confidence 99888877643
No 29
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.58 E-value=1.4e-14 Score=157.03 Aligned_cols=183 Identities=20% Similarity=0.187 Sum_probs=122.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|+. +|+.||||+.+...... ....-.
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------------~~~~~~ 47 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK---------------------------------------LNEVRH 47 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------------hhHHHH
Confidence 5799999999999999 58999999874321000 000112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|...+..+ . ++++.-..-+.......+|||||++|++|.++.... ..+....+...+ +-..+..+|..|
T Consensus 48 ~~~e~~~l~~~----~-h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ 121 (333)
T cd05600 48 VLTERDILTTT----K-SEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELG 121 (333)
T ss_pred HHHHHHHHHhC----C-CCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33444433333 1 233222222223345679999999999999875321 223333332222 223477899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++....... ....+.+.++++++......+...|++++...+.+
T Consensus 122 ivH~dlkp~Nil~~~--~~~~kL~Dfg~a~~~~~~~---------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 122 YIHRDLKPENFLIDA--SGHIKLTDFGLSKGIVTYA---------NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred ccccCCCHHHEEECC--CCCEEEEeCcCCccccccc---------CCcccCccccChhHhcCCCCCCccceecchHHHhh
Confidence 999999999999985 8899999999998765411 11235677889998877777788999999987776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 191 ll~ 193 (333)
T cd05600 191 FLC 193 (333)
T ss_pred hhh
Confidence 653
No 30
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.58 E-value=1.5e-14 Score=154.17 Aligned_cols=186 Identities=20% Similarity=0.183 Sum_probs=121.4
Q ss_pred ccccccceeEEEEEee------------------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004234 299 EPIAAASLGQVHRARL------------------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l------------------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~ 360 (766)
+.||+|++|.||+|++ ++..||||+.++.....
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 61 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKN----------------------------- 61 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHH-----------------------------
Confidence 5799999999999975 13479999986653211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------
Q 004234 361 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL--------- 431 (766)
Q Consensus 361 ~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~--------- 431 (766)
...+|.+|.+.+.++. ++++.-..-+....+..+|+|||++|++|.++......
T Consensus 62 ------------~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 124 (304)
T cd05096 62 ------------ARNDFLKEVKILSRLK-----DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGND 124 (304)
T ss_pred ------------HHHHHHHHHHHHhhcC-----CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhcccccccccccc
Confidence 0124555665555442 23332222222334667999999999999886532110
Q ss_pred ---------CCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHH
Q 004234 432 ---------GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYG 500 (766)
Q Consensus 432 ---------g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a 500 (766)
.+....+...+ +...+..+|..|++|+|+||.||+++. ++.++|+|||++..+........ .+
T Consensus 125 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~----~~ 198 (304)
T cd05096 125 AVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRI----QG 198 (304)
T ss_pred ccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcC--CccEEECCCccceecccCceeEe----cC
Confidence 11222222222 223477899999999999999999986 88999999999987644321110 11
Q ss_pred HhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 501 IYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 501 ~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
.......++++++...+..++..|++++.-.+.+++
T Consensus 199 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 199 RAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred cCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 112245678888887777888899999998777665
No 31
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.57 E-value=1.4e-15 Score=167.96 Aligned_cols=194 Identities=17% Similarity=0.193 Sum_probs=138.5
Q ss_pred ChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004234 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (766)
Q Consensus 288 ~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~ 365 (766)
++..+|.-|.++.+|||.||.||-|.. +|+.|||||+..- ++ |.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKl--------------------rF-p~------------- 604 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKL--------------------RF-PT------------- 604 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecc--------------------cC-CC-------------
Confidence 466788888889999999999999998 5999999997110 11 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---
Q 004234 366 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--- 442 (766)
Q Consensus 366 E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--- 442 (766)
.+|-.+++|.+.++.+ ++|.|..-....|-..+.+.|||-+.|--|.-+...+...+ +.++..-+
T Consensus 605 ------kqesqlR~EVaILq~l-----~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL-~er~TkFlvtQ 672 (888)
T KOG4236|consen 605 ------KQESQLRNEVAILQNL-----HHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRL-PERITKFLVTQ 672 (888)
T ss_pred ------chHHHHHHHHHHHHhc-----CCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccc-hHHHHHHHHHH
Confidence 2344566676666554 45666666666666677789999999977765544333222 22322222
Q ss_pred HHHHHHHHHhCCccccCCCCCcEEEeecC-CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004234 443 VESYLEQILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 521 (766)
Q Consensus 443 v~~~l~qI~~~GffHaDpHPGNILV~~~~-~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~ 521 (766)
+-..++.+|..+++|||+||+|||+.... -.+++|+|||.++.+.++. +. --+-+++.|++++.+...-...
T Consensus 673 IL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks---FR----rsVVGTPAYLaPEVLrnkGyNr 745 (888)
T KOG4236|consen 673 ILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS---FR----RSVVGTPAYLAPEVLRNKGYNR 745 (888)
T ss_pred HHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh---hh----hhhcCCccccCHHHHhhccccc
Confidence 33457889999999999999999997522 2589999999999998742 22 2245699999999888766677
Q ss_pred CCCHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQF 534 (766)
Q Consensus 522 ~~D~~~l~~~i~~ 534 (766)
..|++++...++.
T Consensus 746 SLDMWSVGVIiYV 758 (888)
T KOG4236|consen 746 SLDMWSVGVIIYV 758 (888)
T ss_pred cccceeeeEEEEE
Confidence 8899888765543
No 32
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.57 E-value=6.4e-15 Score=168.61 Aligned_cols=194 Identities=20% Similarity=0.212 Sum_probs=135.3
Q ss_pred ccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 295 RFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 295 ~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
.+..+-+|.|++|+||+++. +|+.||||+-++..... + .+...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r---------------------------~--------~e~~~ 59 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR---------------------------P--------RERWC 59 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccc---------------------------h--------HHHHH
Confidence 34456899999999999997 69999999876532100 0 01112
Q ss_pred HHHHHHHHH--HHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh--hhcCCCHHHHHHHHHH--
Q 004234 373 QEIDYTQEA--ANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL--DELGVDRKRLGRYAVE-- 444 (766)
Q Consensus 373 ~ElDf~~EA--~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l--~~~g~d~~~la~~lv~-- 444 (766)
+|++..+.. .|+.+.. .+|..-. --+...||+||||.|++|.....- ...|+....+...+.+
T Consensus 60 ~EieilkKLnh~NIVk~f---------~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~ 130 (732)
T KOG4250|consen 60 REIEILKKLNHPNIVKLF---------DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLV 130 (732)
T ss_pred HHHHHHHHcCchhhhhhc---------ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHH
Confidence 233222221 2333221 1111110 125567999999999999987543 3356777777666644
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCc--EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVP 521 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~--l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~ 521 (766)
..++.++++|++|||+|||||++-...+|+ -+|+|||.++.+++.. . +. -+-++.+|+.|.+.+ -+..+.
T Consensus 131 ~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s---~---~~-S~vGT~~YLhPel~E~q~~y~~ 203 (732)
T KOG4250|consen 131 SALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS---L---FT-SLVGTEEYLHPELYERQKKYTA 203 (732)
T ss_pred HHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC---e---ee-eecCchhhcChHHHhhccCcCc
Confidence 458889999999999999999997645565 5799999999999875 1 22 235799999999999 488888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFLNSF 539 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l~~~ 539 (766)
..|.++|...+++....+
T Consensus 204 tVDLWS~GvtlY~caTG~ 221 (732)
T KOG4250|consen 204 TVDLWSFGVTLYECATGE 221 (732)
T ss_pred eeehhhhhhHHHHHhccC
Confidence 999999999888776543
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.57 E-value=3.2e-14 Score=154.45 Aligned_cols=183 Identities=15% Similarity=0.133 Sum_probs=124.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+..- +. + ....-+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-------~~---------------------------~-----~~~~~~ 64 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE-------IL---------------------------K-----MKQVQH 64 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-------Hh---------------------------h-----hhhHHH
Confidence 6899999999999999 58999999874210 00 0 000012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|...+.++ +++++.-..-+.......+++|||++|++|.+.... ...+....+.... +-..+..+|..|
T Consensus 65 ~~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ 138 (329)
T PTZ00263 65 VAQEKSILMEL-----SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKD 138 (329)
T ss_pred HHHHHHHHHhC-----CCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34455444443 223332222222345677999999999999876432 1223333222222 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++..+..... ...+.+.++++++......+...|++++...+.+
T Consensus 139 ivH~dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 207 (329)
T PTZ00263 139 IIYRDLKPENLLLDN--KGHVKVTDFGFAKKVPDRTF---------TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYE 207 (329)
T ss_pred eeecCCCHHHEEECC--CCCEEEeeccCceEcCCCcc---------eecCChhhcCHHHHcCCCCCCcceeechHHHHHH
Confidence 999999999999985 89999999999988765432 1246788999999887777788999999988776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 208 llt 210 (329)
T PTZ00263 208 FIA 210 (329)
T ss_pred HHc
Confidence 653
No 34
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.57 E-value=2.2e-14 Score=148.06 Aligned_cols=186 Identities=19% Similarity=0.151 Sum_probs=121.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|++ +|+.||+|+.+...... . +-+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~------~~~ 39 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPD-----------------------------------L------KAK 39 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHH-----------------------------------H------HHH
Confidence 3689999999999998 69999999764322111 1 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
|.+|.+.+.++ +++++.-..-+.......++||||++|++|.++........+...+...+.+ ..+..+|..|
T Consensus 40 ~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 114 (252)
T cd05084 40 FLQEARILKQY-----SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH 114 (252)
T ss_pred HHHHHHHHHhC-----CCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34444444333 2233322222223445679999999999999875433333454444333332 3367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|+||+++. ++.++++|||++..+....... ..+.......+++++....+..+...|++++...+.+
T Consensus 115 i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 188 (252)
T cd05084 115 CIHRDLAARNCLVTE--KNVLKISDFGMSREEEDGVYAS----TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188 (252)
T ss_pred ccccccchheEEEcC--CCcEEECccccCcccccccccc----cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHH
Confidence 999999999999985 8899999999988765321110 0011122345788888877777778899999887766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 189 ~~ 190 (252)
T cd05084 189 AF 190 (252)
T ss_pred HH
Confidence 55
No 35
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.56 E-value=5.7e-14 Score=141.12 Aligned_cols=140 Identities=19% Similarity=0.227 Sum_probs=102.0
Q ss_pred ccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQE 380 (766)
Q Consensus 301 IgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~E 380 (766)
||+|++|.||+|.++|.+|+||+..+.....-..| ...+...+.+|
T Consensus 2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~----------------------------------~~~~~~~~~~E 47 (199)
T TIGR03724 2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELD----------------------------------ERIRRERTRNE 47 (199)
T ss_pred CCCCceEEEEEeecCCccEEEEEecCCcCcCchHH----------------------------------HHHHHHHHHHH
Confidence 78999999999999999999998754422110000 00111245667
Q ss_pred HHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCC
Q 004234 381 AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADP 460 (766)
Q Consensus 381 A~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaDp 460 (766)
.+++..+.+ +++.+|.++.......+++|||++|.++.+...... ..++..+ ...+..+|..|++|+|+
T Consensus 48 ~~~l~~l~~-----~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~-----~~~~~~i-~~~l~~lH~~gi~H~Dl 116 (199)
T TIGR03724 48 ARLLSRARK-----AGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGN-----DELLREI-GRLVGKLHKAGIVHGDL 116 (199)
T ss_pred HHHHHHHHH-----CCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcH-----HHHHHHH-HHHHHHHHHCCeecCCC
Confidence 777777654 357889988877778899999999999988643211 1333333 34567899999999999
Q ss_pred CCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 461 HPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 461 HPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
||+||+++ +++++++|||+++...+
T Consensus 117 ~~~Nil~~---~~~~~liDfg~a~~~~~ 141 (199)
T TIGR03724 117 TTSNIIVR---DDKLYLIDFGLGKYSDE 141 (199)
T ss_pred CcceEEEE---CCcEEEEECCCCcCCCc
Confidence 99999997 68899999999887654
No 36
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.56 E-value=2.9e-14 Score=154.80 Aligned_cols=185 Identities=14% Similarity=0.115 Sum_probs=121.9
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|+||+|+. +|+.||||+.++..... .+ ....+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~------~~~~~ 42 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIA---------------------------------KD------EVAHT 42 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHHH
Confidence 589999999999998 58999999985321100 00 01133
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
.+|.+.+..+ +++++.-...+.......++||||++|++|.+.... ...++...+...+ +-..+..+|..|+
T Consensus 43 ~~E~~~l~~l-----~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~i 116 (328)
T cd05593 43 LTESRVLKNT-----RHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKI 116 (328)
T ss_pred HHHHHHHHhC-----CCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 4455444433 223332222223345667999999999999775432 1223443333322 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++...+......|++++...+.++
T Consensus 117 vHrDikp~NIll~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el 188 (328)
T cd05593 117 VYRDLKLENLMLDK--DGHIKITDFGLCKEGITDAAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (328)
T ss_pred EecccCHHHeEECC--CCcEEEecCcCCccCCCcccc------cccccCCcCccChhhhcCCCCCccCCccccchHHHHH
Confidence 99999999999985 889999999998764322111 1112467788999988777777889999999877766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 189 lt 190 (328)
T cd05593 189 MC 190 (328)
T ss_pred hh
Confidence 53
No 37
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.55 E-value=1.5e-15 Score=158.84 Aligned_cols=195 Identities=19% Similarity=0.284 Sum_probs=142.0
Q ss_pred HHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004234 276 TAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (766)
Q Consensus 276 ~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~ 353 (766)
+..+.=+..|.++++++|+-.. .+|.||+|.||+|.+ .|+.||||... ++.
T Consensus 18 ~~~KLd~~sL~K~PEEVFDi~~--KLGEGSYGSV~KAIH~EsG~v~AIK~VP------V~s------------------- 70 (502)
T KOG0574|consen 18 DGFKLDSSALNKPPEEVFDIVG--KLGEGSYGSVHKAIHRESGHVLAIKKVP------VDT------------------- 70 (502)
T ss_pred cccccChhhhcCChHHHHHHHH--HhcCCcchHHHHHHHhccCcEEEEEecC------ccc-------------------
Confidence 3445556778899999988665 599999999999999 69999999541 111
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeecc--CCCeEEEEeecCCCChhhhhhhhhc
Q 004234 354 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDEL 431 (766)
Q Consensus 354 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~--st~~vLVMEyieG~~L~d~~~l~~~ 431 (766)
|+.+|+.|+. +.+++| .-+|.+.|..| .+..++|||||..++++|+..++..
T Consensus 71 -----DLQEIIKEIS--IMQQC~-------------------S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K 124 (502)
T KOG0574|consen 71 -----DLQEIIKEIS--IMQQCK-------------------SKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRK 124 (502)
T ss_pred -----hHHHHHHHHH--HHHHcC-------------------CchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcC
Confidence 3444444432 222221 11233334333 3678999999999999999988887
Q ss_pred CCCHHHHHHHHHHHH--HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHH
Q 004234 432 GVDRKRLGRYAVESY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKV 509 (766)
Q Consensus 432 g~d~~~la~~lv~~~--l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v 509 (766)
.+...+++..+-... ++.+|...-+|||+|.||||++. +|..+|.|||.++++++.+.. ...+-+.+-.|
T Consensus 125 ~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT--~G~AKLADFGVAGQLTDTMAK------RNTVIGTPFWM 196 (502)
T KOG0574|consen 125 PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNT--DGIAKLADFGVAGQLTDTMAK------RNTVIGTPFWM 196 (502)
T ss_pred CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcc--cchhhhhhccccchhhhhHHh------hCccccCcccc
Confidence 788888877765544 78888888999999999999985 899999999999999886543 22345678888
Q ss_pred HHHHHH-cCCCCCCCCHHHHHHHH
Q 004234 510 LQAMVQ-MGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 510 ~~~l~~-lG~~~~~~D~~~l~~~i 532 (766)
++++++ .|+ ....|++++.-..
T Consensus 197 APEVI~EIGY-~~~ADIWSLGITa 219 (502)
T KOG0574|consen 197 APEVIEEIGY-DTKADIWSLGITA 219 (502)
T ss_pred cHHHHHHhcc-chhhhHhhhcchh
Confidence 887765 565 4456888776443
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.55 E-value=2.6e-14 Score=154.61 Aligned_cols=184 Identities=15% Similarity=0.103 Sum_probs=120.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|.||+|+. +|+.||||+.++..... . .+ ...+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------~----~~-------~~~~ 42 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----------------------------K----DE-------VAHT 42 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------h----HH-------HHHH
Confidence 589999999999998 59999999884311000 0 00 0122
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|.+.+.++ +++++.-..-+.+.....+|||||++|++|.+.... ...++...+...+ +-..++.+|..|+
T Consensus 43 ~~e~~~l~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i 116 (323)
T cd05571 43 LTESRVLQNT-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDV 116 (323)
T ss_pred HHHHHHHHhC-----CCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3444444333 223332222223345567999999999999876432 2223333333322 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++......... .....+++.++++++......+...|++++...+.++
T Consensus 117 vHrDlkp~NIll~~--~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 188 (323)
T cd05571 117 VYRDLKLENLMLDK--DGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred EeCCCCHHHEEECC--CCCEEEeeCCCCcccccCCCc------ccceecCccccChhhhcCCCCCccccCcccchhhhhh
Confidence 99999999999985 889999999998754221111 1112467788999988766677789999998877665
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 189 l 189 (323)
T cd05571 189 M 189 (323)
T ss_pred h
Confidence 4
No 39
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.55 E-value=2.1e-14 Score=160.36 Aligned_cols=179 Identities=21% Similarity=0.222 Sum_probs=130.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+-||.||||.||+|+. +++.||+|....--+ -+.| -+.+.+|++
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr--~~k~--------------------------------l~~l~~ev~ 53 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR--NEKE--------------------------------LKNLRQEVR 53 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCC--chHH--------------------------------HHHHHHHHH
Confidence 4699999999999999 589999998721100 0111 134556666
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHH
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQIL 451 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l---v~~~l~qI~ 451 (766)
..++.+ |+..|.+-|.. +++.++|.||+.| .|..+...+. --+++.++.+ +-..++.+|
T Consensus 54 i~r~lkHpniv~m~esfEt-------------~~~~~vVte~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLh 117 (808)
T KOG0597|consen 54 ILRSLKHPNIVEMLESFET-------------SAHLWVVTEYAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLH 117 (808)
T ss_pred HHHhcCCcchhhHHHhhcc-------------cceEEEEehhhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 666654 66666665543 5678999999999 7777654322 1222222222 223488899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..++.|+|+||.||++.. +|.++++|||+++-++... .+..-+.+++-||++++.+-+...-..|++++.-.
T Consensus 118 s~rilhrd~kPqniLl~~--~~~~KlcdFg~Ar~m~~~t------~vltsikGtPlYmAPElv~e~pyd~~sDlWslGci 189 (808)
T KOG0597|consen 118 SNRILHRDMKPQNILLEK--GGTLKLCDFGLARAMSTNT------SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCI 189 (808)
T ss_pred hcCcccccCCcceeeecC--CCceeechhhhhhhcccCc------eeeeeccCcccccCHHHHcCCCccchhhHHHHHHH
Confidence 999999999999999985 8999999999999887643 23445689999999999998888888899999987
Q ss_pred HHHH
Q 004234 532 AQFF 535 (766)
Q Consensus 532 i~~~ 535 (766)
++++
T Consensus 190 lYE~ 193 (808)
T KOG0597|consen 190 LYEL 193 (808)
T ss_pred HHHH
Confidence 7664
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.55 E-value=4.6e-14 Score=149.53 Aligned_cols=185 Identities=16% Similarity=0.105 Sum_probs=124.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||||+........ ...+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------------~~~~~~ 46 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------------RKGEAM 46 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh---------------------------------------hhhHHH
Confidence 5799999999999998 69999999873321100 011223
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|.+.+.++. +..-+.+...+ ......+++|||++|++|.+.... .....+...+...+.+ ..+..+|..
T Consensus 47 ~~~E~~il~~l~----~~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (285)
T cd05631 47 ALNEKRILEKVN----SRFVVSLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE 121 (285)
T ss_pred HHHHHHHHHhcC----CCcEEEEEEEE-ccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445666555542 21112222222 334567999999999999875432 1223444444333322 347788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++|+|||++..++..... .-..+...++++++...+..+...|++++...+.
T Consensus 122 ~iiH~dikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~ 192 (285)
T cd05631 122 RIVYRDLKPENILLDD--RGHIRISDLGLAVQIPEGETV-------RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIY 192 (285)
T ss_pred CEEeCCCCHHHEEECC--CCCEEEeeCCCcEEcCCCCee-------cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHH
Confidence 9999999999999985 789999999999876543211 0123567788999888777788899999998776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 el~ 195 (285)
T cd05631 193 EMI 195 (285)
T ss_pred HHH
Confidence 655
No 41
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.55 E-value=5.1e-14 Score=152.26 Aligned_cols=186 Identities=22% Similarity=0.198 Sum_probs=119.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|+||+|+. +|+.||||+.++..... + ++. . .+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~-----------------------------~~~-~------~~ 42 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ---D-----------------------------DDV-E------CT 42 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---c-----------------------------cHH-H------HH
Confidence 589999999999998 58999999875321000 0 000 0 11
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|...+... .++++|.-..-+.+.....++||||++|++|.+.... ...++...+...+ +-..+..+|..|+
T Consensus 43 ~~e~~~l~~~----~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~i 117 (320)
T cd05590 43 MTEKRILSLA----RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGI 117 (320)
T ss_pred HHHHHHHHhc----cCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 2222222211 1233322111122334567999999999999875432 2234444333333 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++......... .....+++.++++++.......+..|++++...+.++
T Consensus 118 vH~dlkp~NIli~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 189 (320)
T cd05590 118 IYRDLKLDNVLLDH--EGHCKLADFGMCKEGIFNGKT------TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEM 189 (320)
T ss_pred EeCCCCHHHeEECC--CCcEEEeeCCCCeecCcCCCc------ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHH
Confidence 99999999999986 889999999998764322111 1112467889999998777777888999999877766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 190 ~~ 191 (320)
T cd05590 190 LC 191 (320)
T ss_pred hh
Confidence 53
No 42
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.55 E-value=4.2e-14 Score=161.64 Aligned_cols=230 Identities=17% Similarity=0.150 Sum_probs=156.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|.||||.|+.|.+ +++.+|||+++.+.--+ . |++. .
T Consensus 374 ~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~-------------------------~-------d~Ve-~------ 414 (694)
T KOG0694|consen 374 AVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQ-------------------------R-------DEVE-S------ 414 (694)
T ss_pred EEeccCcCceEEEEEEcCCCcEEEEEEeeccceec-------------------------c-------ccHH-H------
Confidence 5799999999999999 58899999996553110 0 1111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcc
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 456 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~Gff 456 (766)
...|.+..+... .+|.+.--..-++-.++.+.||||+.|+.+..+...+.....+.+....-+-..|+.+|++||+
T Consensus 415 ~~~EkrI~~la~----~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~II 490 (694)
T KOG0694|consen 415 LMCEKRIFELAN----RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGII 490 (694)
T ss_pred HHHHHHHHHHhc----cCCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCce
Confidence 122333222221 2333322222233345679999999999977665444443445555555556678999999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~-~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+||+|-.|||++. +|.++|.||||++.-- ...+ .+...+++++|+++.+.-+..+...|-++|...++++
T Consensus 491 YRDlKLdNiLLD~--eGh~kiADFGlcKe~m~~g~~-------TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeM 561 (694)
T KOG0694|consen 491 YRDLKLDNLLLDT--EGHVKIADFGLCKEGMGQGDR-------TSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEM 561 (694)
T ss_pred eeecchhheEEcc--cCcEEecccccccccCCCCCc-------cccccCChhhcChhhhccCcccchhhHHHHHHHHHHH
Confidence 9999999999986 9999999999998743 2222 2345679999999999999999999999999888776
Q ss_pred HHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhhhHh
Q 004234 536 LNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLD 609 (766)
Q Consensus 536 l~~~~~~l~~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~~lE 609 (766)
|-. + .|+.-+. =.++++.|...=..|++.++.+.+.++|.+++-.
T Consensus 562 L~G-----------------q----~PF~gdd--------Eee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~ 606 (694)
T KOG0694|consen 562 LVG-----------------E----SPFPGDD--------EEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKN 606 (694)
T ss_pred HcC-----------------C----CCCCCCC--------HHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccC
Confidence 632 1 1222110 0134455554445688999999999999887654
No 43
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.55 E-value=1.6e-14 Score=158.29 Aligned_cols=192 Identities=17% Similarity=0.172 Sum_probs=122.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+..- + . -.+... .
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~---------~-----------------~~~~~~------~ 47 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-------M---------L-----------------EKEQVA------H 47 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-------h---------h-----------------hhhHHH------H
Confidence 6799999999999998 58999999873210 0 0 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+. ++++.-..-+.......+|||||++|++|.++... ...++...+...+.+ ..+..+|..|
T Consensus 48 ~~~E~~il~~l~-----h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ 121 (364)
T cd05599 48 VRAERDILAEAD-----NPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLG 121 (364)
T ss_pred HHHHHHHHHhCC-----CCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 233333333321 23332222222334567999999999999886532 223444433333322 3477899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHH--------------------------------HHHHh
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA--------------------------------FYGIY 502 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l--------------------------------~~a~~ 502 (766)
++|+|+||+||+++. +|.++|+|||++..+........... .....
T Consensus 122 ivH~Dlkp~NIl~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (364)
T cd05599 122 YIHRDIKPDNLLLDA--KGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYST 199 (364)
T ss_pred eEeccCCHHHeEECC--CCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccccccccc
Confidence 999999999999986 89999999999876643221110000 00012
Q ss_pred hcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 503 EKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 503 ~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
.+++.++++++..-+..+...|++++...+.+++.
T Consensus 200 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 36778899998877667788999999987776653
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.55 E-value=5.3e-14 Score=149.66 Aligned_cols=181 Identities=20% Similarity=0.174 Sum_probs=119.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||||+....-... ....-.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~ 47 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR---------------------------------------LKQEQH 47 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh---------------------------------------hHHHHH
Confidence 6799999999999998 59999999873210000 000112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~ 452 (766)
+.+|...+.++. +++| ++++. ......+++|||++|++|.++.... ..++.......+. -..+..+|.
T Consensus 48 ~~~E~~~l~~l~-----hp~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~ 119 (291)
T cd05612 48 VHNEKRVLKEVS-----HPFI--IRLFWTEHDQRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHS 119 (291)
T ss_pred HHHHHHHHHhCC-----CCcH--hhhHhhhccCCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333443333331 1222 22222 2234578999999999998865322 2233333333222 234788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||+++. +|.++|+|||++..+...... ..+++.++++++......+...|++++...+
T Consensus 120 ~~i~H~dlkp~NIli~~--~~~~kl~Dfg~~~~~~~~~~~---------~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 188 (291)
T cd05612 120 KEIVYRDLKPENILLDK--EGHIKLTDFGFAKKLRDRTWT---------LCGTPEYLAPEVIQSKGHNKAVDWWALGILI 188 (291)
T ss_pred CCeeecCCCHHHeEECC--CCCEEEEecCcchhccCCccc---------ccCChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 99999999999999985 889999999999877543211 2357788899988766667788999999877
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 189 ~~l~~ 193 (291)
T cd05612 189 YEMLV 193 (291)
T ss_pred HHHHh
Confidence 76653
No 45
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.55 E-value=3.1e-14 Score=154.01 Aligned_cols=185 Identities=18% Similarity=0.146 Sum_probs=118.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|.||+|+. +|+.||+|+........ -..+.++
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~~ 42 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK---------------------------------------KKEEKHI 42 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh---------------------------------------hhHHHHH
Confidence 589999999999998 58899999874210000 0011122
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|... +...+. ++++.-...+.......+++|||++|++|.+..... .......+...+ +-..+..+|..|+
T Consensus 43 ~~e~~~---~l~~~~-h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~gi 117 (325)
T cd05602 43 MSERNV---LLKNVK-HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNI 117 (325)
T ss_pred HHHHHH---HHHhCC-CCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222221 112222 233322222223456679999999999998765321 223333322222 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||+||+++. ++.++|+|||++......... .....+++.++++++...+......|++++...+.++
T Consensus 118 iHrDlkp~Nili~~--~~~~kl~DfG~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 189 (325)
T cd05602 118 VYRDLKPENILLDS--QGHIVLTDFGLCKENIEHNGT------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 189 (325)
T ss_pred EecCCCHHHeEECC--CCCEEEccCCCCcccccCCCC------cccccCCccccCHHHHcCCCCCCccccccccHHHHHH
Confidence 99999999999985 889999999998764322110 1112467788999998877777789999998877666
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 190 ~ 190 (325)
T cd05602 190 L 190 (325)
T ss_pred h
Confidence 5
No 46
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.55 E-value=4.8e-14 Score=152.79 Aligned_cols=86 Identities=15% Similarity=0.071 Sum_probs=64.3
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 524 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D 524 (766)
..+..+|..|++|+|+||.||+++. ++.++|+|||++..+....... ..+.......++++++...+..+...|
T Consensus 185 ~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~sD 258 (338)
T cd05102 185 RGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYV----RKGSARLPLKWMAPESIFDKVYTTQSD 258 (338)
T ss_pred HHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchh----cccCCCCCccccCcHHhhcCCCCcccC
Confidence 3478889999999999999999986 8899999999998764332110 011112335678888887777788899
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
++++...+.+++
T Consensus 259 iwslG~il~el~ 270 (338)
T cd05102 259 VWSFGVLLWEIF 270 (338)
T ss_pred HHHHHHHHHHHH
Confidence 999998776654
No 47
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.55 E-value=5.9e-14 Score=151.54 Aligned_cols=186 Identities=21% Similarity=0.150 Sum_probs=119.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|+. +|+.||||+.+.+.... ++.. -.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~------~~~ 42 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ---------------------------------DDDV------DCT 42 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh---------------------------------hhHH------HHH
Confidence 589999999999998 48899999874321100 0000 012
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|.+-+.. ..++++|....-+.+.....+|||||++|++|.+.... ...++...+...+ +-..+..+|..|+
T Consensus 43 ~~e~~il~~----~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i 117 (321)
T cd05591 43 MTEKRILAL----AAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGV 117 (321)
T ss_pred HHHHHHHHh----ccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 223222222 12334332222222334567999999999999875432 2223433333332 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|.||+++. ++.++|+|||++......... .....+...++++++.......+..|++++...+.++
T Consensus 118 vHrDikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (321)
T cd05591 118 IYRDLKLDNILLDA--EGHCKLADFGMCKEGILNGVT------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEM 189 (321)
T ss_pred eccCCCHHHeEECC--CCCEEEeecccceecccCCcc------ccccccCccccCHHHHcCCCCCCccceechhHHHHHH
Confidence 99999999999986 899999999998764322111 1112357788899988776677889999999877766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 190 ~t 191 (321)
T cd05591 190 MA 191 (321)
T ss_pred hc
Confidence 53
No 48
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.54 E-value=3.2e-14 Score=153.87 Aligned_cols=185 Identities=18% Similarity=0.174 Sum_probs=118.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|+. +|+.||||+.+...... .+ ....+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~------~~~~~ 42 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN---------------------------------RK------EQKHI 42 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHHH
Confidence 589999999999998 69999999874321000 00 00111
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|... +.+.+.+ +++.-..-+.+.....+++|||++|+.|.+.... ...++...+...+ +-..+..+|..|+
T Consensus 43 ~~e~~~---~l~~~~h-p~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~gi 117 (325)
T cd05604 43 MAERNV---LLKNVKH-PFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINI 117 (325)
T ss_pred HHHHHH---HHHhCCC-CCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222111 1122222 3322111122345678999999999998765432 2223433333322 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||+||+++. +|.++|+|||++......... .....++..++++++...+......|++++...+.++
T Consensus 118 vH~Dlkp~NIll~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (325)
T cd05604 118 VYRDLKPENILLDS--QGHVVLTDFGLCKEGIAQSDT------TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEM 189 (325)
T ss_pred eecCCCHHHeEECC--CCCEEEeecCCcccCCCCCCC------cccccCChhhCCHHHHcCCCCCCcCccccccceehhh
Confidence 99999999999986 889999999998754221111 0112467889999998877777889999998777665
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 190 ~ 190 (325)
T cd05604 190 L 190 (325)
T ss_pred h
Confidence 5
No 49
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.54 E-value=4.1e-14 Score=157.23 Aligned_cols=188 Identities=18% Similarity=0.203 Sum_probs=127.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||+|+||.|+.|+. +|+.||||+...... ... . ......+.
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~--------------------~~~---~--------~~~~~~i~---- 67 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKV--------------------SSK---S--------QKLDELIK---- 67 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcc--------------------ccc---c--------cccchhhH----
Confidence 6899999999999988 699999997633200 000 0 00111222
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~---~~l~qI~~~ 453 (766)
+|..++.++. .+|+|.--.-+.+..+..++||||+.|+.|-+.... ...+.. ..++..++ ..+.++|..
T Consensus 68 --rEi~~~~~~~----~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~-~g~l~E-~~ar~~F~Qlisav~y~H~~ 139 (370)
T KOG0583|consen 68 --REISILRRLR----SHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVN-KGRLKE-DEARKYFRQLISAVAYCHSR 139 (370)
T ss_pred --HHHHHHHHhc----cCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHH-cCCCCh-HHHHHHHHHHHHHHHHHHhC
Confidence 3445555543 234443333333456678999999999998886543 222222 33443333 336778999
Q ss_pred CccccCCCCCcEEEeecCC-CcEEEEeecceeccC-hhhHHHHHHHHHHHhhcCHHHHHHHHHHc-C-CCCCCCCHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNG-GRLIFYDFGMMGSIS-PNIREGLLEAFYGIYEKDADKVLQAMVQM-G-VLVPTGDTTAVR 529 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~-g~l~LiDFGlv~~L~-~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G-~~~~~~D~~~l~ 529 (766)
|++|||+||+||+++. + +.++|+|||++.... +.. + .....+.+.|++++++.. + +.....|++++.
T Consensus 140 gi~HRDLK~ENilld~--~~~~~Kl~DFG~s~~~~~~~~---~----l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~G 210 (370)
T KOG0583|consen 140 GIVHRDLKPENILLDG--NEGNLKLSDFGLSAISPGEDG---L----LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLG 210 (370)
T ss_pred CEeeCCCCHHHEEecC--CCCCEEEeccccccccCCCCC---c----ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhH
Confidence 9999999999999986 5 899999999999884 221 1 333567999999999987 5 556778999999
Q ss_pred HHHHHHHHH
Q 004234 530 RTAQFFLNS 538 (766)
Q Consensus 530 ~~i~~~l~~ 538 (766)
..++.++..
T Consensus 211 ViLy~ml~G 219 (370)
T KOG0583|consen 211 VILYVLLCG 219 (370)
T ss_pred HHHHHHHhC
Confidence 888776643
No 50
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.54 E-value=1.3e-14 Score=159.26 Aligned_cols=189 Identities=17% Similarity=0.194 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|+. +|+.||||+.++.-.. -.+... .
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------------------------------~~~~~~------~ 47 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML---------------------------------EKEQVA------H 47 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh---------------------------------hhhhHH------H
Confidence 6799999999999998 5899999988421000 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+..|...+..+ . +++ +++.+. +.....+|||||++|++|.++... ...++...+...+.+ ..+..+|.
T Consensus 48 ~~~e~~~l~~l----~-~~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~ 119 (360)
T cd05627 48 IRAERDILVEA----D-GAW--VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQ 119 (360)
T ss_pred HHHHHHHHHhC----C-CCC--EeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23333333322 1 222 333333 233457999999999999886532 222343333332222 34788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHH-----------------------------HHHHhh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA-----------------------------FYGIYE 503 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l-----------------------------~~a~~~ 503 (766)
.|++|+|+||+||+++. +|.++|+|||++..+.......+..- ......
T Consensus 120 ~givHrDLkp~NIli~~--~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (360)
T cd05627 120 LGFIHRDIKPDNLLLDA--KGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTV 197 (360)
T ss_pred CCeEccCCCHHHEEECC--CCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccC
Confidence 99999999999999985 89999999999887643322111000 000123
Q ss_pred cCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 504 KDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 504 ~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
++..++++++..-...+...|++++...+.+++
T Consensus 198 gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 198 GTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred CCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence 677899999887666777889999987766654
No 51
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.54 E-value=3.1e-14 Score=157.70 Aligned_cols=192 Identities=15% Similarity=0.113 Sum_probs=119.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|+. +|+.||||+.+..-.. -.+... .
T Consensus 7 ~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~---------------------------------~~~~~~------~ 47 (381)
T cd05626 7 KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVL---------------------------------NRNQVA------H 47 (381)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh---------------------------------hhHHHH------H
Confidence 5799999999999998 5899999987421000 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|...+.++ +++++.-..-+.......++||||++|+.|.++... ...++...+...+ +-..+..+|..|
T Consensus 48 ~~~E~~il~~l-----~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 48 VKAERDILAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred HHHHHHHHHhc-----CCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444433332 223322222222334567999999999999886432 1223332222222 233478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHH---------------------------------H-----
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL---------------------------------E----- 496 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~---------------------------------~----- 496 (766)
++|+|+||.||+++. +++++|+|||++..+.......+. .
T Consensus 122 ivHrDlKp~Nili~~--~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (381)
T cd05626 122 FIHRDIKPDNILIDL--DGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQ 199 (381)
T ss_pred eeecCCcHHHEEECC--CCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccc
Confidence 999999999999985 889999999997654211100000 0
Q ss_pred ---HHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 497 ---AFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 497 ---l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
.......+...++++++..-.......|++++...+.+++.
T Consensus 200 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ellt 243 (381)
T cd05626 200 HQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLV 243 (381)
T ss_pred ccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHh
Confidence 00011236778999998876666778899999988777654
No 52
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.54 E-value=6.2e-14 Score=151.33 Aligned_cols=185 Identities=17% Similarity=0.123 Sum_probs=118.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|.||+|+. +|+.||||+.+...... . ++.. .+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~-------------------------------~~~~-------~~ 42 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-D-------------------------------DDVE-------CT 42 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-h-------------------------------hhHH-------HH
Confidence 589999999999998 58899999985432100 0 0000 01
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~Gf 455 (766)
..|...+. ...+++++....-+.+.....++||||++|++|.+.... ...++...+...+. -..+..+|..|+
T Consensus 43 ~~e~~~l~----~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i 117 (316)
T cd05592 43 MVERRVLA----LAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGI 117 (316)
T ss_pred HHHHHHHH----hccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 11111111 111233332222122334567999999999999876432 22344444333332 234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++......... .....++..++++++......+...|++++...+.++
T Consensus 118 vH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05592 118 IYRDLKLDNVLLDK--DGHIKIADFGMCKENMNGEGK------ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189 (316)
T ss_pred EeCCCCHHHeEECC--CCCEEEccCcCCeECCCCCCc------cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence 99999999999985 889999999998765332211 1112357788899988766677789999999877666
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 190 l 190 (316)
T cd05592 190 L 190 (316)
T ss_pred H
Confidence 5
No 53
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.54 E-value=7.5e-14 Score=150.86 Aligned_cols=187 Identities=17% Similarity=0.088 Sum_probs=121.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+...... +. ....
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~------~~~~ 46 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---------------------------------DD------DVEC 46 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHH
Confidence 5799999999999998 57899999885321100 00 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+..|.+.+... .+++.+....-+.+.....++||||++|++|.+.... ...++...+...+.+ ..+..+|..|
T Consensus 47 ~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ 121 (323)
T cd05616 47 TMVEKRVLALS----GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKG 121 (323)
T ss_pred HHHHHHHHHhc----cCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22233322222 2233332222222334567899999999999875432 122344443333332 3477889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||+||+++. ++.++|+|||++......... .....+++.++++++...+..+...|++++...+.+
T Consensus 122 ivHrDlkp~Nill~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 193 (323)
T cd05616 122 IIYRDLKLDNVMLDS--EGHIKIADFGMCKENMWDGVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (323)
T ss_pred EEecCCCHHHeEECC--CCcEEEccCCCceecCCCCCc------cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence 999999999999986 889999999998764322111 111346788999999988878888999999988776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 194 llt 196 (323)
T cd05616 194 MLA 196 (323)
T ss_pred HHh
Confidence 653
No 54
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.54 E-value=4.4e-14 Score=152.69 Aligned_cols=185 Identities=18% Similarity=0.191 Sum_probs=117.7
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|+. +|+.||||+..+..... .. ...++
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~------~~~~~ 42 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK---------------------------------KK------EQKHI 42 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------hh------HHHHH
Confidence 589999999999999 59999999874321000 00 00112
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
..|... +.+.+.+ +++ .+-..+ +.....+++|||++|++|.+..... ..++...+...+ +-..+..+|..|
T Consensus 43 ~~e~~~---~~~~l~h-p~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~g 116 (323)
T cd05575 43 MAERNV---LLKNVKH-PFLVGLHYSF-QTADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLN 116 (323)
T ss_pred HHHHHH---HHhhCCC-CCCCCeeEEE-EeCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 222211 1122222 322 222222 3345679999999999998754322 223333333222 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-+..+...|++++...+.+
T Consensus 117 ivH~dikp~NIll~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (323)
T cd05575 117 IIYRDLKPENILLDS--QGHVVLTDFGLCKEGIEHSKT------TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYE 188 (323)
T ss_pred eEeCCCCHHHeEECC--CCcEEEeccCCCcccccCCCc------cccccCChhhcChhhhcCCCCCccccccccchhhhh
Confidence 999999999999986 889999999998754221111 111235778889998877767778999999987776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 189 ll~ 191 (323)
T cd05575 189 MLY 191 (323)
T ss_pred hhc
Confidence 653
No 55
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.54 E-value=4.4e-14 Score=152.96 Aligned_cols=185 Identities=15% Similarity=0.110 Sum_probs=120.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|.||+|+. +|+.||+|+.+...... .+ ...++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~------~~~~~ 42 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIA---------------------------------KD------EVAHT 42 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hH------HHHHH
Confidence 589999999999998 59999999884321100 00 01123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~Gf 455 (766)
..|.+.+..+. ++++.-..-........+|||||++|++|.+.... ...++...+...+. -..+..+|..|+
T Consensus 43 ~~E~~~l~~l~-----hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i 116 (323)
T cd05595 43 VTESRVLQNTR-----HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDV 116 (323)
T ss_pred HHHHHHHHhCC-----CCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 34444444332 23222111122334567999999999999775432 22234443333322 234788899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++......... .....+++.++++++..-+......|++++...+.++
T Consensus 117 vH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 188 (323)
T cd05595 117 VYRDIKLENLMLDK--DGHIKITDFGLCKEGISDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 188 (323)
T ss_pred EecCCCHHHEEEcC--CCCEEecccHHhccccCCCCc------cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHH
Confidence 99999999999985 889999999988753221110 0112467778889888777777888999999877766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 189 l~ 190 (323)
T cd05595 189 MC 190 (323)
T ss_pred Hh
Confidence 53
No 56
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.53 E-value=1.2e-13 Score=146.00 Aligned_cols=185 Identities=15% Similarity=0.116 Sum_probs=121.1
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||+|++|.||++.. +|+.||||+........ . ...-.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---------------------------------~------~~~~~~~ 41 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK---------------------------------R------KGYEGAM 41 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh---------------------------------h------HHHHHHH
Confidence 68999999999998 58999999863211000 0 0001234
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l---~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
.|.+.+..+ +++++....-..+.....+++|||++|++|.+.... ....++...+...+ +-..+..+|..
T Consensus 42 ~E~~il~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 116 (280)
T cd05608 42 VEKRILAKV-----HSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116 (280)
T ss_pred HHHHHHHhC-----CCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 455555444 223332222222334567999999999999875421 11224444433333 22347789999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++++|||++..+....... ....++..+++++....+..+...|++++...+.
T Consensus 117 ~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~ 188 (280)
T cd05608 117 RIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDGQSKT------KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLY 188 (280)
T ss_pred CcccCCCCHHHEEECC--CCCEEEeeCccceecCCCCccc------cccCCCcCccCHHHhcCCCCCccccHHHHHHHHH
Confidence 9999999999999985 7899999999998765432210 1123567788899888777777899999998777
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 189 el~~ 192 (280)
T cd05608 189 EMIA 192 (280)
T ss_pred HHHh
Confidence 6653
No 57
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.53 E-value=8.3e-14 Score=150.80 Aligned_cols=187 Identities=17% Similarity=0.095 Sum_probs=120.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|+||+|.. +|+.||||+.+...... ++ ..-.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------------~~------~~~~ 46 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ---------------------------------DD------DVEC 46 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hh------HHHH
Confidence 5799999999999998 58999999874211000 00 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+..|.+.+... .+++.+..-..+.......+|||||++|++|.+.... ...++...+...+.+ ..+..+|..|
T Consensus 47 ~~~e~~~l~~~----~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ 121 (323)
T cd05615 47 TMVEKRVLALQ----DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRG 121 (323)
T ss_pred HHHHHHHHHhc----cCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333333222 2223322111122334567999999999999876432 122344443333322 3478889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||+||+++. ++.++|+|||++......... .....++..++++++...+..+...|++++...+.+
T Consensus 122 ivHrDikp~Nill~~--~~~ikL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (323)
T cd05615 122 IIYRDLKLDNVMLDS--EGHIKIADFGMCKEHMVDGVT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 193 (323)
T ss_pred eeccCCCHHHeEECC--CCCEEEeccccccccCCCCcc------ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 999999999999986 889999999998764322110 011235778889999887777888999999987776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 194 llt 196 (323)
T cd05615 194 MLA 196 (323)
T ss_pred HHh
Confidence 653
No 58
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=1.5e-14 Score=150.67 Aligned_cols=182 Identities=16% Similarity=0.150 Sum_probs=127.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.||||.||++.. +|..||.|-..=| .+-..-+..+..|++
T Consensus 25 ~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~----------------------------------~md~k~rq~~v~Ei~ 70 (375)
T KOG0591|consen 25 KKIGRGSFGEVYKVQCLLDGKLVALKKIQFG----------------------------------MMDAKARQDCVKEIS 70 (375)
T ss_pred HHHcCCcchheEEeeeccCcchhhhhhcchh----------------------------------hccHHHHHHHHHHHH
Confidence 5799999999999998 7999999844211 111223344566777
Q ss_pred HHHHHH--HHHHHHH-hcCCCCccccceeeeccCCC-eEEEEeecCCCChhhhhhhhhc---CCCHHHHHHHHHHHH--H
Q 004234 377 YTQEAA--NAELFAS-NFKDMDYVKVPTIFWEYTTP-QILTMEYVPGIKINRIQSLDEL---GVDRKRLGRYAVESY--L 447 (766)
Q Consensus 377 f~~EA~--Nl~~f~~-~f~~~~~V~vP~v~~e~st~-~vLVMEyieG~~L~d~~~l~~~---g~d~~~la~~lv~~~--l 447 (766)
..+..+ |+.++.. .|... .+ ..|||||++++.|+++...-+. -+..+.+-...++.+ +
T Consensus 71 lLkQL~HpNIVqYy~~~f~~~-------------~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL 137 (375)
T KOG0591|consen 71 LLKQLNHPNIVQYYAHSFIED-------------NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRAL 137 (375)
T ss_pred HHHhcCCchHHHHHHHhhhcc-------------chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHH
Confidence 776665 6666654 33221 22 4799999999999997643211 133344444444433 3
Q ss_pred HHHHh--CC--ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004234 448 EQILS--HG--FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 523 (766)
Q Consensus 448 ~qI~~--~G--ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~ 523 (766)
..+|. .. ++|||+||+||+++. +|.++|.|||+.+.++.+.. + .+..-++|.+|.|+.+.-.-....+
T Consensus 138 ~~cH~~~~r~~VmHRDIKPaNIFl~~--~gvvKLGDfGL~r~l~s~~t--f----A~S~VGTPyYMSPE~i~~~~Y~~kS 209 (375)
T KOG0591|consen 138 YHCHSKIPRGTVMHRDIKPANIFLTA--NGVVKLGDFGLGRFLSSKTT--F----AHSLVGTPYYMSPERIHESGYNFKS 209 (375)
T ss_pred HHHhccccccceeeccCcchheEEcC--CCceeeccchhHhHhcchhH--H----HHhhcCCCcccCHHHHhcCCCCcch
Confidence 44444 33 999999999999986 89999999999999987643 2 2334579999999999877778899
Q ss_pred CHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFF 535 (766)
Q Consensus 524 D~~~l~~~i~~~ 535 (766)
|++++.-.+.++
T Consensus 210 DiWslGCllyEM 221 (375)
T KOG0591|consen 210 DIWSLGCLLYEM 221 (375)
T ss_pred hHHHHHHHHHHH
Confidence 999999877655
No 59
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.53 E-value=3.7e-14 Score=153.40 Aligned_cols=184 Identities=13% Similarity=0.083 Sum_probs=120.0
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|+||+|.. +|+.||+|+.++..... . .....+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----------------------------~-----------~~~~~~ 42 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----------------------------K-----------DEVAHT 42 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------------------------h-----------hHHHHH
Confidence 589999999999998 68999999884321000 0 001123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-CC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS-HG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~-~G 454 (766)
..|.+.+..+ .++++.....+.......+|||||++|++|.+.... ...++...+...+. ...+..+|. .|
T Consensus 43 ~~e~~~l~~~-----~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ 116 (325)
T cd05594 43 LTENRVLQNS-----RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKN 116 (325)
T ss_pred HHHHHHHHhC-----CCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3444444333 233333222233445667999999999999775432 22344444333332 234778886 79
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++......... .....+...++++++...+......|++++...+.+
T Consensus 117 ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (325)
T cd05594 117 VVYRDLKLENLMLDK--DGHIKITDFGLCKEGIKDGAT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 188 (325)
T ss_pred EEecCCCCCeEEECC--CCCEEEecCCCCeecCCCCcc------cccccCCcccCCHHHHccCCCCCccccccccceeee
Confidence 999999999999986 889999999998754322111 011246778899999877777788999998876655
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 189 l~ 190 (325)
T cd05594 189 MM 190 (325)
T ss_pred ec
Confidence 54
No 60
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=5.3e-14 Score=158.00 Aligned_cols=189 Identities=20% Similarity=0.244 Sum_probs=141.2
Q ss_pred ChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004234 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (766)
Q Consensus 288 ~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~ 365 (766)
++...|..|. -||.|+-|-||.|.- +++.||||.. ++..+ ++
T Consensus 270 dP~~~y~~~~--kigqgaSG~vy~A~~~~~~~~VaiK~m--~l~~Q-------------------~~------------- 313 (550)
T KOG0578|consen 270 DPRSKYTDFK--KIGQGATGGVYVARKISTKQEVAIKRM--DLRKQ-------------------PK------------- 313 (550)
T ss_pred Chhhhhcchh--hhccccccceeeeeeccCCceEEEEEE--EeccC-------------------Cc-------------
Confidence 3444444444 599999999999998 6899999976 11111 00
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH
Q 004234 366 ECASVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV 443 (766)
Q Consensus 366 E~~~~l~~ElDf~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv 443 (766)
++.+..|+..+++.+ |+..|.+.|- +.++.|.||||++|+.|.|+... ...+..+||...-
T Consensus 314 --keLilnEi~Vm~~~~H~NiVnfl~Syl-------------v~deLWVVMEym~ggsLTDvVt~--~~~~E~qIA~Icr 376 (550)
T KOG0578|consen 314 --KELLLNEILVMRDLHHPNIVNFLDSYL-------------VGDELWVVMEYMEGGSLTDVVTK--TRMTEGQIAAICR 376 (550)
T ss_pred --hhhhHHHHHHHHhccchHHHHHHHHhc-------------ccceeEEEEeecCCCchhhhhhc--ccccHHHHHHHHH
Confidence 123445666666553 7777766543 23678999999999999998543 3356666666544
Q ss_pred H--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004234 444 E--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 521 (766)
Q Consensus 444 ~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~ 521 (766)
+ ..|+.+|..|++|+|+|..|||+.. +|.++|.|||++.+++++... .+.+-+.+.+|+++........+
T Consensus 377 e~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFcaqi~~~~~K------R~TmVGTPYWMAPEVvtrk~YG~ 448 (550)
T KOG0578|consen 377 EILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCAQISEEQSK------RSTMVGTPYWMAPEVVTRKPYGP 448 (550)
T ss_pred HHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeeeccccccCc------cccccCCCCccchhhhhhcccCc
Confidence 3 3488899999999999999999986 899999999999999987631 23456799999999999877788
Q ss_pred CCCHHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFLN 537 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l~ 537 (766)
..|+++|.-.+-++++
T Consensus 449 KVDIWSLGIMaIEMve 464 (550)
T KOG0578|consen 449 KVDIWSLGIMAIEMVE 464 (550)
T ss_pred cccchhhhhHHHHHhc
Confidence 9999999977666554
No 61
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.53 E-value=5.6e-14 Score=151.56 Aligned_cols=185 Identities=18% Similarity=0.151 Sum_probs=115.8
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|+. +|+.||||+........ . ..+.++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~------~~~~~~ 42 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK---------------------------------K------KEQNHI 42 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH---------------------------------h------hHHHHH
Confidence 589999999999999 58999999873211000 0 001112
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|... +...+.+ +++.-..-+.+.....++||||++|++|.+.... ...+....+...+ +-..+..+|..|+
T Consensus 43 ~~e~~~---~l~~~~h-~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i 117 (321)
T cd05603 43 MAERNV---LLKNLKH-PFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNI 117 (321)
T ss_pred HHHHHH---HHHhCCC-CCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222211 1112222 3222111112334567999999999999765432 1223333332222 2234788899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. +|.++|+|||++......... .....+.+.++++++......+...|++++...+.++
T Consensus 118 vH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 189 (321)
T cd05603 118 IYRDLKPENILLDS--QGHVVLTDFGLCKEGVEPEET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEM 189 (321)
T ss_pred EeccCCHHHeEECC--CCCEEEccCCCCccCCCCCCc------cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhh
Confidence 99999999999986 899999999998753221110 0112356778889888766677789999998877666
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 190 ~ 190 (321)
T cd05603 190 L 190 (321)
T ss_pred h
Confidence 5
No 62
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.53 E-value=8.5e-14 Score=149.71 Aligned_cols=184 Identities=15% Similarity=0.124 Sum_probs=120.0
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||.|++|.||+|+. +|+.||||+.++.... .. .....+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~----------------------------------~~-----~~~~~~~ 41 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV----------------------------------SR-----SEVTHTL 41 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh----------------------------------hh-----hHHHHHH
Confidence 68999999999998 5899999987421000 00 0011233
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCcc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGFF 456 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~Gff 456 (766)
.|...+.++ +++++.-...+.......++||||++|++|.+.... ...++...+...+. -..+..+|..|++
T Consensus 42 ~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 115 (312)
T cd05585 42 AERTVLAQV-----NCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVI 115 (312)
T ss_pred HHHHHHHhC-----CCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 455444443 223332221222334667999999999999876532 22234433333322 2347889999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
|+|+||.||+++. ++.++++|||++......... .....+.+.++++++......+...|++++...+.+++
T Consensus 116 HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~ 187 (312)
T cd05585 116 YRDLKPENILLDY--QGHIALCDFGLCKLNMKDDDK------TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEML 187 (312)
T ss_pred eCCCCHHHeEECC--CCcEEEEECcccccCccCCCc------cccccCCcccCCHHHHcCCCCCCccceechhHHHHHHH
Confidence 9999999999985 889999999998764332211 11123577788898887666777889999998777665
Q ss_pred H
Q 004234 537 N 537 (766)
Q Consensus 537 ~ 537 (766)
.
T Consensus 188 t 188 (312)
T cd05585 188 T 188 (312)
T ss_pred h
Confidence 3
No 63
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.52 E-value=2e-14 Score=162.15 Aligned_cols=194 Identities=17% Similarity=0.141 Sum_probs=126.9
Q ss_pred hhhhhhccCc-ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH
Q 004234 289 LDDVFERFDV-EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (766)
Q Consensus 289 ~eeiF~~fd~-~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~ 367 (766)
|+..++++.. ++||+|+||.||||.|.|. ||||+..-.- .-++.
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whGd-VAVK~Lnv~~----------------------------------pt~~q 431 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWHGD-VAVKLLNVDD----------------------------------PTPEQ 431 (678)
T ss_pred cccCHHHhhccceeccccccceeecccccc-eEEEEEecCC----------------------------------CCHHH
Confidence 3444444433 7899999999999999874 9999873211 11121
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--H
Q 004234 368 ASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--V 443 (766)
Q Consensus 368 ~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v 443 (766)
.+ .|.+|..|+++-++. .|- .+..++ ....+|+.||+|-+|..........++..++...+ +
T Consensus 432 lq------aFKnEVa~lkkTRH~-------NIl-LFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQi 497 (678)
T KOG0193|consen 432 LQ------AFKNEVAVLKKTRHE-------NIL-LFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQI 497 (678)
T ss_pred HH------HHHHHHHHHhhcchh-------hhe-eeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHH
Confidence 11 355666655554321 111 122222 23478999999999998766555555554443333 3
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC---C
Q 004234 444 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL---V 520 (766)
Q Consensus 444 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~---~ 520 (766)
...+.++|..+|+|+|+|..||++.+ +++++|.|||+++.-+.-... .=+..-.+..-+|+++++.|+-. +
T Consensus 498 aqGM~YLHAK~IIHrDLKSnNIFl~~--~~kVkIgDFGLatvk~~w~g~----~q~~qp~gsilwmAPEvIRmqd~nPfS 571 (678)
T KOG0193|consen 498 AQGMDYLHAKNIIHRDLKSNNIFLHE--DLKVKIGDFGLATVKTRWSGE----QQLEQPHGSLLWMAPEVIRMQDDNPFS 571 (678)
T ss_pred HHhhhhhhhhhhhhhhccccceEEcc--CCcEEEecccceeeeeeeccc----cccCCCccchhhhcHHHHhhcccCCCC
Confidence 33477899999999999999999985 799999999998753221111 11122345677899999998754 3
Q ss_pred CCCCHHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l~ 537 (766)
+..|+|+|.-.+++++.
T Consensus 572 ~qSDVYaFGiV~YELlt 588 (678)
T KOG0193|consen 572 FQSDVYAFGIVWYELLT 588 (678)
T ss_pred cccchhhhhHHHHHHHh
Confidence 45799999988877764
No 64
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=2.4e-14 Score=158.74 Aligned_cols=194 Identities=20% Similarity=0.256 Sum_probs=125.3
Q ss_pred hhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH
Q 004234 290 DDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (766)
Q Consensus 290 eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~ 367 (766)
.+.|+.++ -||.|.|||||+|+. +|+.||+|-.|=+..+ +++
T Consensus 116 ~~~feki~--kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~----------------------------------~~~ 159 (560)
T KOG0600|consen 116 ADSFEKIE--KIGEGTYGQVYKARDLETGKIVALKKVRFDNEK----------------------------------EGF 159 (560)
T ss_pred hHHHHHHH--HhcCcchhheeEeeecccCcEEEEEEeecccCC----------------------------------Ccc
Confidence 34455544 599999999999998 6999999976432211 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--
Q 004234 368 ASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE-- 444 (766)
Q Consensus 368 ~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~-- 444 (766)
-..+.+|+- -++++ .+..-|..-.++. .+++..|||.|||+- .|.-+.......++..++-..+-+
T Consensus 160 ~~t~~REI~------ILr~l----~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl 228 (560)
T KOG0600|consen 160 PITAIREIK------ILRRL----DHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLL 228 (560)
T ss_pred hHHHHHHHH------HHHhc----CCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHH
Confidence 222233322 22222 1212223333333 347788999999984 344333333333444444333322
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 524 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D 524 (766)
..+.++|..||+|||+|..|||++. +|.++|.|||+++.+++.....|..-++.+..+-++.+ +..--..+..|
T Consensus 229 ~Gl~~cH~~gvlHRDIK~SNiLidn--~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELL----LG~t~Yg~aVD 302 (560)
T KOG0600|consen 229 EGLEYCHSRGVLHRDIKGSNILIDN--NGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELL----LGATSYGTAVD 302 (560)
T ss_pred HHHHHHhhcCeeeccccccceEEcC--CCCEEeccccceeeccCCCCcccccceEEeeccChHHh----cCCccccccee
Confidence 2367788999999999999999985 99999999999999999888888777777666666544 22223456779
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
+++..-.+.+++
T Consensus 303 lWS~GCIl~El~ 314 (560)
T KOG0600|consen 303 LWSVGCILAELF 314 (560)
T ss_pred ehhhhHHHHHHH
Confidence 998887665554
No 65
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.52 E-value=1.1e-13 Score=149.31 Aligned_cols=184 Identities=19% Similarity=0.158 Sum_probs=119.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|.||+|+. +|+.||||+.++..... ++-. -.+
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~~~------~~~ 42 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI---------------------------------DDDV------ECT 42 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------cchH------HHH
Confidence 589999999999999 58999999885421100 0000 011
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~ 453 (766)
..|.+.+.. .. +++++ ++.+. ...+..+|||||++|++|.+.... ....+.......+. -..+..+|..
T Consensus 43 ~~e~~~l~~---~~-~~~~i--~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~ 115 (316)
T cd05620 43 MVEKRVLAL---AW-ENPFL--THLYCTFQTKEHLFFVMEFLNGGDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSK 115 (316)
T ss_pred HHHHHHHHh---cc-CCCCc--cCeeEEEEeCCEEEEEECCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 223222221 11 22332 33332 334567999999999999875432 22344443333322 2347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||+||+++. ++.++|+|||++......... .....++..++++++...+..++..|++++...+.
T Consensus 116 ~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (316)
T cd05620 116 GIIYRDLKLDNVMLDR--DGHIKIADFGMCKENVFGDNR------ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLY 187 (316)
T ss_pred CeEecCCCHHHeEECC--CCCEEeCccCCCeecccCCCc------eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHH
Confidence 9999999999999985 889999999998753211110 01124677889999988777788899999998877
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 188 el~~ 191 (316)
T cd05620 188 EMLI 191 (316)
T ss_pred HHHh
Confidence 7653
No 66
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.52 E-value=1.4e-13 Score=150.61 Aligned_cols=183 Identities=14% Similarity=0.054 Sum_probs=121.6
Q ss_pred ccccccceeEEEEEee--c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~-G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+.||+|++|.||+|++ + +..||||+....... ..+ ..-
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~---------------------------------~~~------~~~ 76 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII---------------------------------KQK------QVD 76 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh---------------------------------hhh------hHH
Confidence 7899999999999987 2 368999976311000 000 001
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
.+.+|.+.+..+. ++++.-..-+.......++||||++|++|.++.... ..++...+.... +...+..+|..
T Consensus 77 ~~~~E~~~l~~l~-----hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~ 150 (340)
T PTZ00426 77 HVFSERKILNYIN-----HPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSL 150 (340)
T ss_pred HHHHHHHHHHhCC-----CCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2345555444432 233322222223345679999999999998865322 223333322222 22347888999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||+||+++. +|.++|+|||++..++.... ...+++.++++++......+...|++++...+.
T Consensus 151 ~ivHrDLkp~NILl~~--~~~ikL~DFG~a~~~~~~~~---------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 219 (340)
T PTZ00426 151 NIVYRDLKPENLLLDK--DGFIKMTDFGFAKVVDTRTY---------TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIY 219 (340)
T ss_pred CeEccCCCHHHEEECC--CCCEEEecCCCCeecCCCcc---------eecCChhhcCHHHHhCCCCCccccccchhhHHH
Confidence 9999999999999985 89999999999988764321 124678899999987766777889999998777
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 220 ell~ 223 (340)
T PTZ00426 220 EILV 223 (340)
T ss_pred HHhc
Confidence 6653
No 67
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.52 E-value=8.5e-14 Score=148.47 Aligned_cols=197 Identities=17% Similarity=0.181 Sum_probs=125.8
Q ss_pred HHhCCChhhhhhccCc-------ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004234 283 EELGAPLDDVFERFDV-------EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (766)
Q Consensus 283 ~elG~~~eeiF~~fd~-------~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~ 353 (766)
+|++.+.+-++...+. ..||.|++|+||+|.. +|+.||||..+-...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------------------------ 58 (292)
T cd06657 3 EQFRAALQMVVDPGDPRTYLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ------------------------ 58 (292)
T ss_pred hHhhhhceEeecCCChHHHhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccch------------------------
Confidence 4455444444433333 4699999999999998 699999997521110
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC
Q 004234 354 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV 433 (766)
Q Consensus 354 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~ 433 (766)
..+-.+.+|...+..+ .+..-+.....+ ......+++|||++|.++.++... ...
T Consensus 59 ------------------~~~~~~~~e~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~--~~~ 113 (292)
T cd06657 59 ------------------QRRELLFNEVVIMRDY----QHENVVEMYNSY-LVGDELWVVMEFLEGGALTDIVTH--TRM 113 (292)
T ss_pred ------------------hHHHHHHHHHHHHHhc----CCcchhheeeEE-EeCCEEEEEEecCCCCcHHHHHhc--CCC
Confidence 0112244444434333 121112222222 234567999999999999886432 223
Q ss_pred CHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004234 434 DRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 511 (766)
Q Consensus 434 d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~ 511 (766)
+...+...+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++..+....... ....++..++++
T Consensus 114 ~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~p 185 (292)
T cd06657 114 NEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAP 185 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEcccccceecccccccc------cccccCccccCH
Confidence 44443333322 3478899999999999999999985 7899999999988775433211 112345567788
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 512 AMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 512 ~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+....+..++..|++++...+.+++
T Consensus 186 E~~~~~~~~~~~Dv~slGvil~el~ 210 (292)
T cd06657 186 ELISRLPYGPEVDIWSLGIMVIEMV 210 (292)
T ss_pred HHhcCCCCCchhhHHHHHHHHHHHH
Confidence 8776666677889999987766654
No 68
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.52 E-value=8.2e-14 Score=151.37 Aligned_cols=188 Identities=15% Similarity=0.151 Sum_probs=120.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+....- .... .....
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~----------------------------------~~~~-----~~~~~ 47 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWE----------------------------------MLKR-----AETAC 47 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH----------------------------------HHhh-----HHHHH
Confidence 5799999999999998 58999999873210 0000 00111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+... +++++....-+.+.....+|||||++|++|.++.......++...+...+ +-..++.+|..|
T Consensus 48 ~~~e~~~l~~~-----~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~ 122 (331)
T cd05624 48 FREERNVLVNG-----DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH 122 (331)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22333222221 22333222222233456799999999999998754322233433332222 223478889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCCHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVR 529 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~~~~~~D~~~l~ 529 (766)
++|+|+||+||+++. ++.++|+|||++..+....... .....+...++++++... +......|++++.
T Consensus 123 iiHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlG 195 (331)
T cd05624 123 YVHRDIKPDNVLLDM--NGHIRLADFGSCLKMNQDGTVQ-----SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 195 (331)
T ss_pred eeeccCchHHEEEcC--CCCEEEEeccceeeccCCCcee-----eccccCCcccCCHHHHhccccCCCCCCCcccEEeee
Confidence 999999999999985 8899999999998775432211 112346778888888764 4456778999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 196 vil~ell~ 203 (331)
T cd05624 196 VCMYEMLY 203 (331)
T ss_pred hhhhhhhh
Confidence 87776653
No 69
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.52 E-value=1e-13 Score=150.70 Aligned_cols=186 Identities=15% Similarity=0.101 Sum_probs=119.8
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|+||+|+. +|+.||+|+.+...... .+... .+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~~ 42 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND---------------------------------DEDID------WV 42 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc---------------------------------hhHHH------HH
Confidence 689999999999998 58999999884321110 00000 12
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|...+.+ ..+++++.-..-+....+..++||||++|++|.+.... ...++...+...+ +...+..+|..|+
T Consensus 43 ~~E~~~l~~----~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~i 117 (329)
T cd05618 43 QTEKHVFEQ----ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGI 117 (329)
T ss_pred HHHHHHHHh----cCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 222222221 11233332222222345678999999999999775432 2234443333332 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++......... .....+++.++++++...+......|++++...+.++
T Consensus 118 vH~Dikp~Nili~~--~~~~kL~DfG~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 189 (329)
T cd05618 118 IYRDLKLDNVLLDS--EGHIKLTDYGMCKEGLRPGDT------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM 189 (329)
T ss_pred eeCCCCHHHEEECC--CCCEEEeeCCccccccCCCCc------cccccCCccccCHHHHcCCCCCCccceecccHHHHHH
Confidence 99999999999986 889999999998754221110 0112457788899988877777789999999887766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 190 ~~ 191 (329)
T cd05618 190 MA 191 (329)
T ss_pred hh
Confidence 54
No 70
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.52 E-value=4.6e-14 Score=155.73 Aligned_cols=191 Identities=18% Similarity=0.189 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||.|++|.||+|+. +|+.||||+.+.. +. . ..+... .
T Consensus 7 ~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~-------~~---------~-----------------~~~~~~------~ 47 (376)
T cd05598 7 KTIGIGAFGEVCLVRKVDTNALYAMKTLRKA-------DV---------L-----------------MRNQAA------H 47 (376)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEcHH-------HH---------H-----------------hhhhHH------H
Confidence 6899999999999998 5899999987321 00 0 000111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|...+.++ ++++|.-...........++||||++|++|.++.... ..++...+...+ +-..+..+|..|
T Consensus 48 ~~~E~~il~~l-----~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 121 (376)
T cd05598 48 VKAERDILAEA-----DNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMG 121 (376)
T ss_pred HHHHHHHHHhC-----CCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23344333332 2233322222223356679999999999999875321 122332222222 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhh----------------------------------HHHHHH---H
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI----------------------------------REGLLE---A 497 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~----------------------------------r~~l~~---l 497 (766)
++|+|+||+||+++. ++.++|+|||++..+.... +..... .
T Consensus 122 ivHrDlkp~Nill~~--~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (376)
T cd05598 122 FIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRC 199 (376)
T ss_pred eEeCCCCHHHEEECC--CCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccc
Confidence 999999999999985 8899999999975331000 000000 0
Q ss_pred HHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 498 FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 498 ~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
......+.+.++++++..-...+...|++++...+.+++
T Consensus 200 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 200 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred cccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 001124677889999887666777889999987776654
No 71
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.52 E-value=3.6e-14 Score=154.13 Aligned_cols=191 Identities=17% Similarity=0.135 Sum_probs=123.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +|+.||||+.+...... .+. .-.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~------~~~ 47 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK---------------------------------RNQ------IAH 47 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh---------------------------------ccH------HHH
Confidence 5799999999999999 59999999874211000 000 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+..+. ++++.-...+.......++||||++|++|.++.... ..++...+...+ +-..+..+|..|
T Consensus 48 ~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 121 (350)
T cd05573 48 VRAERDILADAD-----SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLG 121 (350)
T ss_pred HHHHHHHHHhcC-----CCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 333333333321 222211111122345679999999999998865422 234443333332 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH-----------------------HHHHHHHhhcCHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-----------------------LEAFYGIYEKDADKVLQ 511 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l-----------------------~~l~~a~~~~D~~~v~~ 511 (766)
++|+|+||.||+++. ++.++|+|||++..+........ .........+++.++++
T Consensus 122 iiH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (350)
T cd05573 122 FIHRDIKPDNILIDA--DGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAP 199 (350)
T ss_pred eeccCCCHHHeEECC--CCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCH
Confidence 999999999999986 89999999999987765430000 00011123467888999
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 512 AMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 512 ~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
++...+..++..|++++...+.+++
T Consensus 200 E~~~~~~~~~~~DiwSlG~il~ell 224 (350)
T cd05573 200 EVLRGTPYGLECDWWSLGVILYEML 224 (350)
T ss_pred HHHcCCCCCCceeeEecchhhhhhc
Confidence 9988777788899999998776665
No 72
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.51 E-value=1.5e-13 Score=149.07 Aligned_cols=183 Identities=15% Similarity=0.118 Sum_probs=119.2
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|.||+|+. +|+.||||+.++..... .+... .+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~---------------------------------~~~~~------~~ 42 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND---------------------------------DEDID------WV 42 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHH------HH
Confidence 589999999999998 58999999985321100 00000 12
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
..|...+.. ..++++| +.++. +..+..+|+|||++|++|.+.... ...++...+...+.+ ..+..+|..
T Consensus 43 ~~e~~il~~----~~~hp~I--v~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~ 115 (329)
T cd05588 43 QTEKHVFET----ASNHPFL--VGLHSCFQTESRLFFVIEFVSGGDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHER 115 (329)
T ss_pred HHHHHHHHh----ccCCCCC--CceEEEEEcCCEEEEEEeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 223322222 2233333 22232 334567999999999999775432 223444443333322 347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceecc-ChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI-SPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L-~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
|++|+|+||.||+++. ++.++|+|||++... ..... .....++..++++++...+..+...|++++...+
T Consensus 116 ~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l 186 (329)
T cd05588 116 GIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGIRPGDT-------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLM 186 (329)
T ss_pred CeEecCCCHHHeEECC--CCCEEECcCccccccccCCCc-------cccccCCccccCHHHHcCCCCCCccceechHHHH
Confidence 9999999999999986 889999999998753 21111 0112457788899988877777789999999887
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 187 ~el~~ 191 (329)
T cd05588 187 FEMMA 191 (329)
T ss_pred HHHHH
Confidence 77653
No 73
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.51 E-value=1.5e-13 Score=148.52 Aligned_cols=185 Identities=17% Similarity=0.098 Sum_probs=119.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+++.... + ++ .-.
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~---~-----------------------------~~-------~~~ 46 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ---D-----------------------------DD-------VEC 46 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh---h-----------------------------hH-------HHH
Confidence 5799999999999998 47899999875421100 0 00 002
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~ 452 (766)
+..|.+.+..+. +.+. ++..+. ......++||||++|++|.+.... ...+........+. -..+..+|.
T Consensus 47 ~~~e~~~l~~~~----~~~~--i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05587 47 TMVEKRVLALPG----KPPF--LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHS 119 (324)
T ss_pred HHHHHHHHHhcC----CCCc--eeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 233444433321 2222 233322 234567999999999999875432 12233333333322 234788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|+||.||+++. ++.++|+|||++......... .....++..++++++...+..+...|++++...+
T Consensus 120 ~~ivH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 191 (324)
T cd05587 120 KGIIYRDLKLDNVMLDA--EGHIKIADFGMCKENIFGGKT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 191 (324)
T ss_pred CCeEecCCCHHHeEEcC--CCCEEEeecCcceecCCCCCc------eeeecCCccccChhhhcCCCCCcccchhhhHHHH
Confidence 99999999999999986 889999999998653211110 0112356788889988777777788999999877
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 192 ~ellt 196 (324)
T cd05587 192 YEMLA 196 (324)
T ss_pred HHHHh
Confidence 76653
No 74
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.51 E-value=1.5e-13 Score=149.08 Aligned_cols=184 Identities=17% Similarity=0.116 Sum_probs=119.4
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|.. +|+.||||+.+...... .+... .+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~~ 42 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD---------------------------------DEDID------WV 42 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHH------HH
Confidence 589999999999998 58999999984321100 00001 12
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
..|...+.++ .+++.+ +.++. +..+..+|||||++|++|.+.... ...++...+...+.+ ..+..+|..
T Consensus 43 ~~e~~~~~~~----~~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~ 115 (327)
T cd05617 43 QTEKHVFEQA----SSNPFL--VGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHER 115 (327)
T ss_pred HHHHHHHHhh----cCCCCE--eeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2333333222 223332 33332 334567999999999999875432 122444333333222 347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++...+..+...|++++...+.
T Consensus 116 ~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (327)
T cd05617 116 GIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGLGPGDT------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMF 187 (327)
T ss_pred CeeccCCCHHHEEEeC--CCCEEEeccccceeccCCCCc------eecccCCcccCCHHHHCCCCCCchheeehhHHHHH
Confidence 9999999999999986 889999999998753221111 01123577888899887777777899999998877
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 188 ell~ 191 (327)
T cd05617 188 EMMA 191 (327)
T ss_pred HHHh
Confidence 6653
No 75
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.51 E-value=1.3e-13 Score=149.15 Aligned_cols=185 Identities=15% Similarity=0.123 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||+|++|.||+|+. .|+.||||+.+..... .....
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~--------------------------------------~~~~~ 43 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV--------------------------------------RNQKD 43 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH--------------------------------------hhhhh
Confidence 4699999999999986 3789999987421000 00001
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 450 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI 450 (766)
...+..|...+..+. +++|. +-..+ ......+++|||++|++|.+..... ..+....+...+ +-..+..+
T Consensus 44 ~~~~~~E~~il~~l~-----hp~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l 116 (323)
T cd05584 44 TAHTKAERNILEAVK-----HPFIVDLIYAF-QTGGKLYLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHL 116 (323)
T ss_pred HHHHHHHHHHHHhCC-----CCchhceeeEE-ecCCeEEEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 123445555555442 23332 22222 3345679999999999998764321 122332222222 22347889
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|+||.||+++. +|.++|+|||++......... .....+...++++++..........|++++..
T Consensus 117 H~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 188 (323)
T cd05584 117 HQQGIIYRDLKPENILLDA--QGHVKLTDFGLCKESIHEGTV------THTFCGTIEYMAPEILMRSGHGKAVDWWSLGA 188 (323)
T ss_pred HHCCeecCCCCHHHeEECC--CCCEEEeeCcCCeecccCCCc------ccccCCCccccChhhccCCCCCCcceecccHH
Confidence 9999999999999999985 899999999998754322111 11123567788888887666677889999988
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 189 il~ell 194 (323)
T cd05584 189 LMYDML 194 (323)
T ss_pred HHHHHh
Confidence 776665
No 76
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.51 E-value=1.4e-13 Score=148.88 Aligned_cols=189 Identities=15% Similarity=0.137 Sum_probs=120.2
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||+|++|.||+|+. +|+.||+|+.+...... . .. .
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~----------------~----------------~~------~ 47 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ----------------K----------------AK------T 47 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh----------------h----------------hh------H
Confidence 5799999999999986 47899999874211000 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~ 451 (766)
.-.+..|...+..+ .+++++....-+.+.....+++|||++|++|.+.... ...++...+...+ +-..+..+|
T Consensus 48 ~~~~~~e~~~l~~l----~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH 122 (332)
T cd05614 48 VEHTRTERNVLEHV----RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLH 122 (332)
T ss_pred HHHHHHHHHHHHhc----cCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01223344433333 2334333322233344567899999999999876432 2234444443333 223478899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~ 530 (766)
..|++|+|+||.||+++. ++.++|+|||++..+........ ....+...++++++.... ..+...|++++..
T Consensus 123 ~~~ivHrDlkp~Nili~~--~~~~kl~DfG~~~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 195 (332)
T cd05614 123 KLGIVYRDIKLENILLDS--EGHVVLTDFGLSKEFLSEEKERT-----YSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGI 195 (332)
T ss_pred HCCcEecCCCHHHeEECC--CCCEEEeeCcCCccccccCCCcc-----ccccCCccccCHHHhcCCCCCCCccccccchh
Confidence 999999999999999986 88999999999886543221111 012467788889887632 2456789999998
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 196 il~ellt 202 (332)
T cd05614 196 LIFELLT 202 (332)
T ss_pred hhhhhhc
Confidence 7776653
No 77
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.50 E-value=1e-13 Score=151.73 Aligned_cols=181 Identities=14% Similarity=0.115 Sum_probs=115.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+......+. .. -+
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~------~~ 118 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDT-----------------------------------VR------RQ 118 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHH-----------------------------------HH------HH
Confidence 6799999999999998 58999999874332111 11 12
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcc
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 456 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~Gff 456 (766)
+.+|++.+..+. +++|.-..-+.+..+..+++|||++|++|.+...... .....++..++ ..+..+|..|++
T Consensus 119 ~~~E~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~i~~qi~-~aL~~LH~~~iv 190 (353)
T PLN00034 119 ICREIEILRDVN-----HPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADE--QFLADVARQIL-SGIAYLHRRHIV 190 (353)
T ss_pred HHHHHHHHHhCC-----CCCcceeeeEeccCCeEEEEEecCCCCcccccccCCH--HHHHHHHHHHH-HHHHHHHHCCEe
Confidence 344555444432 2332222222344566799999999998875321110 01112333333 347789999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-----CCCCCCHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-----LVPTGDTTAVRRT 531 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~-----~~~~~D~~~l~~~ 531 (766)
|+|+||.||+++. ++.++|+|||++..+....... ....++..++++++..... .....|+++|...
T Consensus 191 HrDlkp~NIll~~--~~~~kL~DfG~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvi 262 (353)
T PLN00034 191 HRDIKPSNLLINS--AKNVKIADFGVSRILAQTMDPC------NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS 262 (353)
T ss_pred ecCCCHHHEEEcC--CCCEEEcccccceecccccccc------cccccCccccCccccccccccCcCCCcchhHHHHHHH
Confidence 9999999999986 8899999999988765432110 1123566778888764321 2236799999987
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 263 l~el~ 267 (353)
T PLN00034 263 ILEFY 267 (353)
T ss_pred HHHHH
Confidence 76654
No 78
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.50 E-value=1.8e-13 Score=138.37 Aligned_cols=176 Identities=25% Similarity=0.341 Sum_probs=113.2
Q ss_pred EEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCC--CcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 004234 309 VHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD--GAKRDWVAIYDECASVLYQEIDYTQEAANAE 385 (766)
Q Consensus 309 VhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~--~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~ 385 (766)
||.|.. +|.+||||+-|.+...- + ........ .+.+. ....+|..+. .....+|++|+.
T Consensus 2 Vy~~~~~~~~~~a~K~~r~~~~~F-k-------~~~~y~~~-~~r~~~~~~~~~~~~~~---------~~~~~~E~~~L~ 63 (188)
T PF01163_consen 2 VYHAIDPDGEEVAVKIYRTGRTSF-K-------RRKKYRDY-DYRFKKYRHKSSWRYLI---------REWAKKEFRNLK 63 (188)
T ss_dssp EEEEEECTTEEEEEEEE-S---SS---------HHHHHTTT-STTSTTC--G--CHHHH---------HHHHHHHHHHHH
T ss_pred EEEEECCCCCEEEEEEeccCceEE-E-------Eeeeeecc-cchhcccccccCHHHHH---------HHHHHHHHHHHH
Confidence 899998 89999999998875332 1 11222221 11110 0112232222 235567889998
Q ss_pred HHHHhcCCCCccccceeeeccCCCeEEEEeecC--CCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 004234 386 LFASNFKDMDYVKVPTIFWEYTTPQILTMEYVP--GIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPG 463 (766)
Q Consensus 386 ~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyie--G~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaDpHPG 463 (766)
++.+ .++.+|++|. .++.+|||||++ |.++..+........+...+...++..+...++..|++|+||++.
T Consensus 64 ~l~~-----~Gv~vP~p~~--~~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~ 136 (188)
T PF01163_consen 64 RLYE-----AGVPVPKPYD--YNRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEY 136 (188)
T ss_dssp HCCC-----TT-SS--EEE--EETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STT
T ss_pred HHHH-----CCccCCcEEE--EeCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChh
Confidence 8743 4688999994 468899999999 988887665443345677888888888888889999999999999
Q ss_pred cEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004234 464 NIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 519 (766)
Q Consensus 464 NILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~ 519 (766)
||++. ++++.+||||.+...+.+.-.. ++.+|...+...+...|..
T Consensus 137 NIlv~---~~~~~iIDf~qav~~~~p~a~~-------~l~RDi~ni~~fF~~~~~~ 182 (188)
T PF01163_consen 137 NILVD---DGKVYIIDFGQAVDSSHPNAEE-------LLRRDIENIIRFFKKKGVQ 182 (188)
T ss_dssp SEEEE---TTCEEE--GTTEEETTSTTHHH-------HHHHHHHHHHHHHHCCC--
T ss_pred hEEee---cceEEEEecCcceecCCccHHH-------HHHHHHHHHHHHHHHhCCC
Confidence 99998 4599999999998887544332 3456888888888887753
No 79
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.50 E-value=1e-13 Score=149.79 Aligned_cols=187 Identities=14% Similarity=0.053 Sum_probs=120.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||||+.++..... .+..+ .
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~~------~ 45 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA---------------------------------RDEVE------S 45 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHHH------H
Confidence 5799999999999998 58999999985321000 00000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+..|.+-+.... .+. ++++.-..-+.+.....++||||++|++|..... ...++...+...+.+ ..+..+|..|
T Consensus 46 l~~e~~~~~~~~-~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ 121 (324)
T cd05589 46 LMCEKRIFETAN-SER-HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENK 121 (324)
T ss_pred HHHHHHHHHhcc-ccC-CCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 222332222211 122 2333222222234567899999999999877542 233454444333332 3477899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++......... .....+.+.++++++..-+......|++++...+.+
T Consensus 122 ivHrdlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e 193 (324)
T cd05589 122 IVYRDLKLDNLLLDT--EGFVKIADFGLCKEGMGFGDR------TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYE 193 (324)
T ss_pred eEecCCCHHHeEECC--CCcEEeCcccCCccCCCCCCc------ccccccCccccCHhHhcCCCCCcccchhhHHHHHHH
Confidence 999999999999986 899999999988754321111 011235778889998877667778899999987766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 194 l~ 195 (324)
T cd05589 194 ML 195 (324)
T ss_pred HH
Confidence 65
No 80
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.50 E-value=2e-13 Score=148.24 Aligned_cols=180 Identities=16% Similarity=0.192 Sum_probs=120.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +|..||+|+.+...... ... .
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~------~ 49 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPA-----------------------------------IRN------Q 49 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHH-----------------------------------HHH------H
Confidence 5799999999999999 58999999885432111 111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS- 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~- 452 (766)
+.+|.+.+..+. ++++ .+..++ ......++||||++|++|.++.... ..++...+..... ...+..+|.
T Consensus 50 ~~~E~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 50 IIRELQVLHECN-----SPYIVGFYGAF-YSDGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred HHHHHHHHHHCC-----CCCCCeEEEEE-EECCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 334444444432 2222 222222 2345679999999999999875322 2233333322222 233666776
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
+|++|+|+||.||+++. ++.++|+|||++..+...... ...++..+++++....+..+...|++++...+
T Consensus 123 ~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~--------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 192 (331)
T cd06649 123 HQIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 192 (331)
T ss_pred CCEEcCCCChhhEEEcC--CCcEEEccCcccccccccccc--------cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHH
Confidence 47999999999999986 889999999999877543221 12356778888888777777888999999877
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 193 ~el~ 196 (331)
T cd06649 193 VELA 196 (331)
T ss_pred HHHH
Confidence 6665
No 81
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.50 E-value=1.3e-13 Score=152.36 Aligned_cols=190 Identities=16% Similarity=0.184 Sum_probs=119.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+....- . .. .+... .
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~--------------~~-----------------~~~~~------~ 47 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE--M--------------FK-----------------KDQLA------H 47 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHH--H--------------HH-----------------hHHHH------H
Confidence 6799999999999998 69999999873210 0 00 00001 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
+.+|.+.+..+ ++++ +++++. ......+|||||++|++|.++... ...++...+...+ +-..+..+|.
T Consensus 48 ~~~E~~il~~l-----~hp~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~ 119 (377)
T cd05629 48 VKAERDVLAES-----DSPW--VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHK 119 (377)
T ss_pred HHHHHHHHHhC-----CCCC--cceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33444444332 2233 333332 334567999999999999886432 1223333322222 2234788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH-HHH----------------------------------
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-LEA---------------------------------- 497 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l-~~l---------------------------------- 497 (766)
.|++|+|+||.||+++. ++.++++|||++..+.......+ ..+
T Consensus 120 ~givHrDlkp~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T cd05629 120 LGFIHRDIKPDNILIDR--GGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATW 197 (377)
T ss_pred CCeeccCCCHHHEEECC--CCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhh
Confidence 99999999999999985 88999999999864432111000 000
Q ss_pred ------HHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 498 ------FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 498 ------~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
...-..+++.++++++......+...|++++...+.+++.
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 243 (377)
T cd05629 198 KKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLI 243 (377)
T ss_pred hhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhc
Confidence 0000236778899998876666778899999887766553
No 82
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.50 E-value=2.2e-13 Score=147.96 Aligned_cols=185 Identities=17% Similarity=0.226 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|+. +|+.||||+.+.. +. .. ..... .
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~-------~~---------~~-----------------~~~~~------~ 47 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKW-------EM---------LK-----------------RAETA------C 47 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHH-------HH---------hh-----------------hhhHH------H
Confidence 5799999999999998 5899999987321 00 00 00001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
|..|...+..+ +++++ +..+. +.....++||||++|++|.++.......+....+...+ +-..+..+|.
T Consensus 48 ~~~e~~~l~~~-----~~~~i--~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 48 FREERDVLVNG-----DRRWI--TNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred HHHHHHHHHhC-----CCCCC--CceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23333333222 22222 22222 23456799999999999998754322233433333322 2234778999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCCHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTA 527 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~~~~~~D~~~ 527 (766)
.|++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.++++++... +......|+++
T Consensus 121 ~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws 193 (331)
T cd05597 121 LGYVHRDIKPDNVLLDK--NGHIRLADFGSCLRLLADGTVQ-----SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWS 193 (331)
T ss_pred CCeEECCCCHHHEEECC--CCCEEEEECCceeecCCCCCcc-----ccceeccccccCHHHHhhccccccCCCCcceeeh
Confidence 99999999999999985 8899999999987765432210 011235677888888762 44566789999
Q ss_pred HHHHHHHHH
Q 004234 528 VRRTAQFFL 536 (766)
Q Consensus 528 l~~~i~~~l 536 (766)
+...+.+++
T Consensus 194 lG~~l~el~ 202 (331)
T cd05597 194 LGVCMYEML 202 (331)
T ss_pred hhhHHHHHh
Confidence 988776665
No 83
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.49 E-value=1.3e-13 Score=152.54 Aligned_cols=190 Identities=16% Similarity=0.187 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +|+.||||+.+.. +. ...+. .-.
T Consensus 7 ~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~-------~~--------------------------~~~~~------~~~ 47 (382)
T cd05625 7 KTLGIGAFGEVCLARKVDTKALYAMKTLRKK-------DV--------------------------LLRNQ------VAH 47 (382)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEeHH-------Hh--------------------------hhHHH------HHH
Confidence 5799999999999998 5899999987321 00 00001 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
+.+|...+..+ ++++ +++.+. ......+|||||++|++|.++... ...++...+...+ +-..+..+|.
T Consensus 48 ~~~E~~il~~~-----~h~~--iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~ 119 (382)
T cd05625 48 VKAERDILAEA-----DNEW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHK 119 (382)
T ss_pred HHHHHHHHHhC-----CCCc--CCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33444434333 2232 233332 224567999999999999886432 1123333222222 2234788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH---------------------------------H----
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL---------------------------------L---- 495 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l---------------------------------~---- 495 (766)
.|++|+|+||.|||++. +|.++|+|||++..+.......+ .
T Consensus 120 ~~ivHrDlKp~NILl~~--~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (382)
T cd05625 120 MGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAA 197 (382)
T ss_pred CCeecCCCCHHHEEECC--CCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhc
Confidence 99999999999999986 89999999999754321000000 0
Q ss_pred ----HHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 496 ----EAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 496 ----~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
........+.+.++++++..-.-.....|++++...+.+++.
T Consensus 198 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ellt 243 (382)
T cd05625 198 RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 243 (382)
T ss_pred cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHh
Confidence 000001235678899998876666778899999988776653
No 84
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.49 E-value=1e-13 Score=150.70 Aligned_cols=198 Identities=20% Similarity=0.217 Sum_probs=124.0
Q ss_pred HHHhCCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCccc
Q 004234 282 EEELGAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKR 358 (766)
Q Consensus 282 e~elG~~~eeiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~ 358 (766)
++|+++...++.+.|.. ++||+|++|+||+|.. +|+.||||+.........
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------------------- 56 (343)
T cd07878 3 RQELNKTVWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLI-------------------------- 56 (343)
T ss_pred HHHHhHHHhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhH--------------------------
Confidence 45566555555555554 7999999999999998 588999998743211100
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceee-----eccCCCeEEEEeecCCCChhhhhhhhhcCC
Q 004234 359 DWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIF-----WEYTTPQILTMEYVPGIKINRIQSLDELGV 433 (766)
Q Consensus 359 d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~-----~e~st~~vLVMEyieG~~L~d~~~l~~~g~ 433 (766)
..-.+.+|.+.+..+. +..-+.+..++ .......+++||++ |.++.++.. ...+
T Consensus 57 --------------~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~--~~~l 115 (343)
T cd07878 57 --------------HARRTYRELRLLKHMK----HENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVK--CQKL 115 (343)
T ss_pred --------------HHHHHHHHHHHHHhcC----CCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHh--cCCC
Confidence 0001223333333321 11111111111 12234568999988 667776543 2234
Q ss_pred CHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004234 434 DRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 511 (766)
Q Consensus 434 d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~ 511 (766)
+...+...+.+ ..+..+|..|++|+|+||+||+++. ++.++|+|||++..++..... ..++..++++
T Consensus 116 ~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~---------~~~t~~y~aP 184 (343)
T cd07878 116 SDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELRILDFGLARQADDEMTG---------YVATRWYRAP 184 (343)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEEEcCCccceecCCCcCC---------ccccccccCc
Confidence 44443333322 3467889999999999999999985 889999999999887653211 1245667777
Q ss_pred HHHHc-CCCCCCCCHHHHHHHHHHHHH
Q 004234 512 AMVQM-GVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 512 ~l~~l-G~~~~~~D~~~l~~~i~~~l~ 537 (766)
++... ...+...|++++...+.+++.
T Consensus 185 E~~~~~~~~~~~~DiwslG~il~el~~ 211 (343)
T cd07878 185 EIMLNWMHYNQTVDIWSVGCIMAELLK 211 (343)
T ss_pred hHhcCCccCCchhhhHhHHHHHHHHHH
Confidence 77654 345667899999988777654
No 85
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.49 E-value=1.6e-13 Score=142.25 Aligned_cols=183 Identities=20% Similarity=0.233 Sum_probs=122.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+-+|.|.+|.||+|+. +|+.||||-.+.+-.+ +.+..+..+|+-
T Consensus 8 ~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k----------------------------------dGi~~talREIK 53 (318)
T KOG0659|consen 8 EKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK----------------------------------DGINRTALREIK 53 (318)
T ss_pred hhhcCcceEEEEEEEecCCCcEEEEEEeeccccc----------------------------------cCccHHHHHHHH
Confidence 5799999999999999 6999999988655211 112334567777
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHh
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILS 452 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~--l~qI~~ 452 (766)
+.+|.+ |+..+.+.|.+ .+...||.||++- .|..+......-+.+..+-..+...+ +..+|.
T Consensus 54 ~Lqel~h~nIi~LiD~F~~-------------~~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~ 119 (318)
T KOG0659|consen 54 LLQELKHPNIIELIDVFPH-------------KSNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHS 119 (318)
T ss_pred HHHHccCcchhhhhhhccC-------------CCceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHh
Confidence 777765 55555554443 3556899999984 45554443444455666555544433 777899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
+.++|||+||.|+|++. +|.+++.|||+++.+.+..+...-+ ++.+= ..+.+.+...--.....|++++...+
T Consensus 120 ~~IlHRDlKPnNLLis~--~g~lKiADFGLAr~f~~p~~~~~~~----V~TRW-YRAPELLfGsr~Yg~~VDmWavGCI~ 192 (318)
T KOG0659|consen 120 KWILHRDLKPNNLLISS--DGQLKIADFGLARFFGSPNRIQTHQ----VVTRW-YRAPELLFGSRQYGTGVDMWAVGCIF 192 (318)
T ss_pred hhhhcccCCccceEEcC--CCcEEeecccchhccCCCCcccccc----eeeee-ccChHHhccchhcCCcchhhhHHHHH
Confidence 99999999999999996 9999999999999998766654322 11111 11122222222334567888888776
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 193 AELl 196 (318)
T KOG0659|consen 193 AELL 196 (318)
T ss_pred HHHH
Confidence 6554
No 86
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=2.5e-14 Score=160.09 Aligned_cols=187 Identities=19% Similarity=0.264 Sum_probs=128.4
Q ss_pred CCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHH
Q 004234 286 GAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAI 363 (766)
Q Consensus 286 G~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i 363 (766)
..+++.+|.+.- -||-||||-||.|+. +.+.||||-+.-.- +...-.|.+|
T Consensus 21 k~DPEklf~dLr--EIGHGSFGAVYfArd~~n~evVAIKKMsySG-------------------------KQs~EKWqDI 73 (948)
T KOG0577|consen 21 KDDPEKLFSDLR--EIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-------------------------KQSNEKWQDI 73 (948)
T ss_pred cCCHHHHHHHHH--HhcCCccceeEEeeccCccceeeeeeccccc-------------------------cccHHHHHHH
Confidence 457788877554 499999999999999 57899999651110 0111135555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH
Q 004234 364 YDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV 443 (766)
Q Consensus 364 ~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv 443 (766)
+.| +.|.+. +.+...|.---+|.. .+..|||||||=|- -+|+...-..++....|+....
T Consensus 74 lKE--------VrFL~~----------l~HPntieYkgCyLr-e~TaWLVMEYClGS-AsDlleVhkKplqEvEIAAi~~ 133 (948)
T KOG0577|consen 74 LKE--------VRFLRQ----------LRHPNTIEYKGCYLR-EHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAITH 133 (948)
T ss_pred HHH--------HHHHHh----------ccCCCcccccceeec-cchHHHHHHHHhcc-HHHHHHHHhccchHHHHHHHHH
Confidence 443 334333 333333333333322 24579999999884 4666555555566666666543
Q ss_pred --HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCC
Q 004234 444 --ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGV 518 (766)
Q Consensus 444 --~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~---lG~ 518 (766)
-..+..+|.++.+|+|+|.||||+++ .|.++|.|||.+...+|.. .| -+++..|+++++- -|-
T Consensus 134 gaL~gLaYLHS~~~IHRDiKAGNILLse--~g~VKLaDFGSAsi~~PAn------sF----vGTPywMAPEVILAMDEGq 201 (948)
T KOG0577|consen 134 GALQGLAYLHSHNRIHRDIKAGNILLSE--PGLVKLADFGSASIMAPAN------SF----VGTPYWMAPEVILAMDEGQ 201 (948)
T ss_pred HHHHHHHHHHHhhHHhhhccccceEecC--CCeeeeccccchhhcCchh------cc----cCCccccchhHheeccccc
Confidence 34588999999999999999999996 8999999999999988843 23 3588888887763 477
Q ss_pred CCCCCCHHHHHHH
Q 004234 519 LVPTGDTTAVRRT 531 (766)
Q Consensus 519 ~~~~~D~~~l~~~ 531 (766)
.....|++++.-.
T Consensus 202 YdgkvDvWSLGIT 214 (948)
T KOG0577|consen 202 YDGKVDVWSLGIT 214 (948)
T ss_pred cCCccceeeccch
Confidence 7788899888744
No 87
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.49 E-value=7.5e-14 Score=150.97 Aligned_cols=187 Identities=17% Similarity=0.211 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+...... .+.. -.
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~~~------~~ 47 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA---------------------------------QETV------SF 47 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh---------------------------------hhHH------HH
Confidence 5799999999999998 59999999874321000 0000 11
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+... +++++.-..-+.+..+..+|||||++|++|.++.......++...+...+ +-..+..+|..|
T Consensus 48 ~~~e~~i~~~~-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ 122 (330)
T cd05601 48 FEEERDILSIS-----NSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG 122 (330)
T ss_pred HHHHHHHHHhC-----CCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22333333221 22332221112233456799999999999998754332334444333332 234578899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH------cCCCCCCCCHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ------MGVLVPTGDTTAV 528 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~------lG~~~~~~D~~~l 528 (766)
++|+|+||.||+++. +|.++|+|||++..+...... ......+++.++++++.. .+..+...|++++
T Consensus 123 i~H~Dlkp~NIll~~--~~~~kL~Dfg~a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl 195 (330)
T cd05601 123 YVHRDIKPENVLIDR--TGHIKLADFGSAARLTANKMV-----NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSL 195 (330)
T ss_pred eEcccCchHheEECC--CCCEEeccCCCCeECCCCCce-----eeecccCCccccCHHHhccccccccCCCCCcceeecc
Confidence 999999999999986 899999999999887643221 011124567788888875 3445567899988
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+.+++
T Consensus 196 G~il~el~ 203 (330)
T cd05601 196 GVIAYEMI 203 (330)
T ss_pred cceeeeec
Confidence 86655543
No 88
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.49 E-value=1.3e-13 Score=152.76 Aligned_cols=186 Identities=19% Similarity=0.173 Sum_probs=120.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||+|+....-. ... ...-.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~----------------------------------~~~-----~~~~~ 89 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM----------------------------------IKR-----SDSAF 89 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh----------------------------------hhh-----hhHHH
Confidence 5799999999999999 589999998731100 000 00011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+..+ +++++.-..-..+.....++||||++|++|.++... ...+...+.... +-..+..+|..|
T Consensus 90 ~~~e~~i~~~~-----~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~ 162 (370)
T cd05621 90 FWEERDIMAFA-----NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMG 162 (370)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22333333222 223322222222334567999999999999987532 233433333222 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCCHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAVRR 530 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l----G~~~~~~D~~~l~~ 530 (766)
++|+|+||+||+++. ++.++|+|||++..+....... .....+++.++++++... +..+...|++++..
T Consensus 163 IvHrDLKp~NILl~~--~~~~kL~DFG~a~~~~~~~~~~-----~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ 235 (370)
T cd05621 163 LIHRDVKPDNMLLDK--HGHLKLADFGTCMKMDETGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (370)
T ss_pred eEecCCCHHHEEECC--CCCEEEEecccceecccCCcee-----cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehH
Confidence 999999999999985 8999999999998875432110 112346788899988763 23566789999998
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 236 ilyell~ 242 (370)
T cd05621 236 FLFEMLV 242 (370)
T ss_pred HHHHHHh
Confidence 7776653
No 89
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.49 E-value=4.8e-13 Score=136.03 Aligned_cols=182 Identities=18% Similarity=0.187 Sum_probs=126.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|+|++|.||+|.. +|+.|++|+.++...+ ..-+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------------------------------~~~~ 43 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKE------------------------------------------KKEK 43 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchh------------------------------------------HHHH
Confidence 6899999999999999 4899999988543320 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+. ++++..+.-........+++|||++|.+|.++.......++...+...+.+ ..+..+|..|
T Consensus 44 ~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 44 IINEIQILKKCK-----HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred HHHHHHHHHhCC-----CCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 334444443332 232222222222346789999999999999876443234555555544433 3478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||++++ ++.++|+|||.+..+..... .....++..++.+++...+..+...|++++...+.+
T Consensus 119 i~h~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~ 189 (253)
T cd05122 119 IIHRDIKAANILLTS--DGEVKLIDFGLSAQLSDTKA-------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIE 189 (253)
T ss_pred EecCCCCHHHEEEcc--CCeEEEeecccccccccccc-------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHH
Confidence 999999999999986 88999999999988876542 011234566778888877777778999999877766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 190 l~ 191 (253)
T cd05122 190 LA 191 (253)
T ss_pred HH
Confidence 55
No 90
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.49 E-value=3.1e-13 Score=142.59 Aligned_cols=187 Identities=19% Similarity=0.186 Sum_probs=117.8
Q ss_pred ccccccceeEEEEEee---cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL---KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l---~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+.||+|++|.||+|+. .|+.||||+.+...... . . ..
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~---------------------------~-------~------~~ 46 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE---------------------------G-------M------PL 46 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC---------------------------C-------c------hH
Confidence 5799999999999987 37899999875332111 0 0 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee----ccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHH--HHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFW----EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVE--SYLE 448 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~----e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~--~~l~ 448 (766)
.+.+|...+..+.. +.+..-+.+..++. +..+..+++|||++| .+.++... ...+++...+...+.+ ..+.
T Consensus 47 ~~~~e~~~l~~l~~-~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 124 (290)
T cd07862 47 STIREVAVLRHLET-FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 124 (290)
T ss_pred HHHHHHHHHHhhcc-cCCCCcceEEEEEecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 12233332332221 12211122222221 123457999999986 56654322 2223444444333322 3478
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
.+|..|++|+|+||.||+++. ++.++|+|||++..++.... .....+...++++++...+..+...|++++
T Consensus 125 ~lH~~~iiH~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Diwsl 195 (290)
T cd07862 125 FLHSHRVVHRDLKPQNILVTS--SGQIKLADFGLARIYSFQMA-------LTSVVVTLWYRAPEVLLQSSYATPVDLWSV 195 (290)
T ss_pred HHHHCCeeeCCCCHHHEEEcC--CCCEEEccccceEeccCCcc-------cccccccccccChHHHhCCCCCCccchHHH
Confidence 899999999999999999985 88999999999987654311 111235667888888877777778899999
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+.+++
T Consensus 196 G~il~el~ 203 (290)
T cd07862 196 GCIFAEMF 203 (290)
T ss_pred HHHHHHHH
Confidence 98776665
No 91
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.48 E-value=2.3e-13 Score=150.78 Aligned_cols=184 Identities=21% Similarity=0.236 Sum_probs=120.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||+|+....- . ..+- ..-.
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~--~--------------------------------~~~~-----~~~~ 89 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE--M--------------------------------IKRS-----DSAF 89 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHH--h--------------------------------hhhH-----HHHH
Confidence 6799999999999999 58999999873210 0 0000 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
+..|...+..+ +++++ ++++. ......++||||++|++|.++... ..++...+...+ +-..+..+|.
T Consensus 90 ~~~e~~i~~~~-----~hp~i--v~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 90 FWEERDIMAFA-----NSPWV--VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred HHHHHHHHHhC-----CCCCC--CeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 23333333322 22332 23332 234557999999999999887532 234433332222 2234788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCCHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAV 528 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l----G~~~~~~D~~~l 528 (766)
.|++|+|+||.||+++. +|.++|+|||++..+....... .....+++.++++++... +..+...|++++
T Consensus 161 ~~ivHrDLkp~NIll~~--~~~ikL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSl 233 (371)
T cd05622 161 MGFIHRDVKPDNMLLDK--SGHLKLADFGTCMKMNKEGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 233 (371)
T ss_pred CCEEeCCCCHHHEEECC--CCCEEEEeCCceeEcCcCCccc-----ccCcccCccccCHHHHhccCCCccCCCccceeeh
Confidence 99999999999999986 8999999999998875432110 012246788899998864 235677899999
Q ss_pred HHHHHHHHH
Q 004234 529 RRTAQFFLN 537 (766)
Q Consensus 529 ~~~i~~~l~ 537 (766)
...+.+++.
T Consensus 234 Gvilyell~ 242 (371)
T cd05622 234 GVFLYEMLV 242 (371)
T ss_pred hHHHHHHHh
Confidence 988777653
No 92
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.48 E-value=2.8e-13 Score=149.37 Aligned_cols=200 Identities=19% Similarity=0.166 Sum_probs=124.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcc-cchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK-RDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~-~d~~~i~~E~~~~l~~El 375 (766)
.-||+|++|.|-.|+. +|+.|||||....-. .+ +...+...... ..+.
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~---------~~------~~~~~~~~a~~~~~~e-------------- 153 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKEL---------RR------QYGFPRQPAMKLMPIE-------------- 153 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhh---------hh------hcccccccccccCcHH--------------
Confidence 4699999999999998 699999999832100 00 00111000000 0011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeec-cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWE-YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQIL 451 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l---v~~~l~qI~ 451 (766)
+.++|...|.++. +..-|..-.|+.+ .++..|||.|||..+.+........ .+. ...++.. +-..|+++|
T Consensus 154 kv~~EIailKkl~----H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~-els-~~~Ar~ylrDvv~GLEYLH 227 (576)
T KOG0585|consen 154 KVRREIAILKKLH----HPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP-ELS-EQQARKYLRDVVLGLEYLH 227 (576)
T ss_pred HHHHHHHHHHhcC----CcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcc-ccc-HHHHHHHHHHHHHHHHHHH
Confidence 2344555555543 2222444444443 3567799999999998876432211 011 2223333 334488999
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC----CCCCCCHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV----LVPTGDTTA 527 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~----~~~~~D~~~ 527 (766)
.+|++|||+||.|+|++. +|+++|.|||.+-......-+..-+.+.. .-+++..+++++...|- .....|+++
T Consensus 228 ~QgiiHRDIKPsNLLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~-tvGTPAF~APE~c~~~~~~~~~g~a~DiWa 304 (576)
T KOG0585|consen 228 YQGIIHRDIKPSNLLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSR-TVGTPAFFAPELCSGGNSFSYSGFALDIWA 304 (576)
T ss_pred hcCeeccccchhheEEcC--CCcEEeeccceeeecccCCccccHHHHhh-cCCCccccchHhhcCCCCccccchhhhhhh
Confidence 999999999999999996 89999999999886632211111111111 46899999999997743 223469999
Q ss_pred HHHHHHHHH
Q 004234 528 VRRTAQFFL 536 (766)
Q Consensus 528 l~~~i~~~l 536 (766)
+...++-|+
T Consensus 305 lGVTLYCll 313 (576)
T KOG0585|consen 305 LGVTLYCLL 313 (576)
T ss_pred hhhhHHHhh
Confidence 998887765
No 93
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.48 E-value=3.7e-13 Score=141.28 Aligned_cols=189 Identities=17% Similarity=0.173 Sum_probs=121.8
Q ss_pred hhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH
Q 004234 290 DDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (766)
Q Consensus 290 eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~ 367 (766)
.+.|..+ +.||+|++|.||+|.+ +|+.||+|+........ .
T Consensus 3 ~~~y~~~--~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~ 45 (277)
T cd06642 3 EELFTKL--ERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAED-----------------------------------E 45 (277)
T ss_pred HHHHHHH--HHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchH-----------------------------------H
Confidence 3444433 4699999999999998 58999999874221110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--H
Q 004234 368 ASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--S 445 (766)
Q Consensus 368 ~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~ 445 (766)
. -++.+|+..+.++ +++++.-..-........++||||++|+++.++.. ........+...+.+ .
T Consensus 46 ~------~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~ 112 (277)
T cd06642 46 I------EDIQQEITVLSQC-----DSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLK--PGPLEETYIATILREILK 112 (277)
T ss_pred H------HHHHHHHHHHHcC-----CCCccHhhhcccccCCceEEEEEccCCCcHHHHhh--cCCCCHHHHHHHHHHHHH
Confidence 0 1234444444433 12222111111123456799999999999988643 222333333332222 3
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 525 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~ 525 (766)
.+..+|..|++|+|+||+||+++. ++.+++.|||++..+....... ....++..+++++....+..+...|+
T Consensus 113 ~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv 184 (277)
T cd06642 113 GLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDFKADI 184 (277)
T ss_pred HHHHHhcCCeeccCCChheEEEeC--CCCEEEccccccccccCcchhh------hcccCcccccCHHHhCcCCCchhhhH
Confidence 367788999999999999999986 8899999999998876543211 11234666778888777667778899
Q ss_pred HHHHHHHHHHH
Q 004234 526 TAVRRTAQFFL 536 (766)
Q Consensus 526 ~~l~~~i~~~l 536 (766)
+++...+.+++
T Consensus 185 ~slG~il~el~ 195 (277)
T cd06642 185 WSLGITAIELA 195 (277)
T ss_pred HHHHHHHHHHH
Confidence 99987766554
No 94
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.48 E-value=2.9e-13 Score=147.00 Aligned_cols=185 Identities=17% Similarity=0.199 Sum_probs=117.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+++. .++.||+|+.... + ..... ....
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~-------~---------------------------~~~~~-----~~~~ 47 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKW-------E---------------------------MLKRA-----ETAC 47 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHH-------H---------------------------HHHhh-----HHHH
Confidence 5799999999999998 4789999987210 0 00000 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
|..|...+..+ ++++ ++.++. +.....+|||||++|++|.++.......++...+...+ +...+..+|.
T Consensus 48 ~~~e~~~l~~~-----~~~~--i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 48 FREERDVLVNG-----DNQW--ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred HHHHHHHHhhC-----CCCC--EeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33333322221 2232 233332 33456799999999999998754322233333332222 2234778999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-----cCCCCCCCCHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-----MGVLVPTGDTTA 527 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-----lG~~~~~~D~~~ 527 (766)
.|++|+|+||.||+++. ++.++|+|||++..+....... .....+...++++++.. .+......|+++
T Consensus 121 ~~iiHrDlkp~Nili~~--~~~~kL~DfG~a~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwS 193 (332)
T cd05623 121 LHYVHRDIKPDNILMDM--NGHIRLADFGSCLKLMEDGTVQ-----SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWS 193 (332)
T ss_pred CCeEecCCCHHHEEECC--CCCEEEeecchheecccCCcce-----ecccccCccccCHHHHhccccCCCCCCCcCCEEe
Confidence 99999999999999985 8899999999987664322110 11124577888888876 234566789999
Q ss_pred HHHHHHHHH
Q 004234 528 VRRTAQFFL 536 (766)
Q Consensus 528 l~~~i~~~l 536 (766)
+...+.+++
T Consensus 194 lGvil~ell 202 (332)
T cd05623 194 LGVCMYEML 202 (332)
T ss_pred eHHHHHHHh
Confidence 988776665
No 95
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.48 E-value=5.4e-13 Score=136.85 Aligned_cols=187 Identities=17% Similarity=0.163 Sum_probs=125.5
Q ss_pred ccccccceeEEEEEeec-----CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-----G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|+||+|... +..|+||+.++..... .
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~ 39 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-----------------------------------------E 39 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-----------------------------------------H
Confidence 36899999999999993 7899999885432211 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh--------hcCCCHHHHHHHHHH-
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--------ELGVDRKRLGRYAVE- 444 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~--------~~g~d~~~la~~lv~- 444 (766)
.-++..|.+.+..+. ++++.-..-+.......+++|||++|++|.+..... ....+...+...+.+
T Consensus 40 ~~~~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 114 (262)
T cd00192 40 RKDFLKEARVMKKLG-----HPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI 114 (262)
T ss_pred HHHHHHHHHHHhhcC-----CCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHH
Confidence 113344444444442 222222221222356679999999999999975433 233455555444433
Q ss_pred -HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004234 445 -SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 523 (766)
Q Consensus 445 -~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~ 523 (766)
..+..+|..|++|+|++|.||+++. ++.++|+|||.+..+....... ...-...+..+++++....+..+...
T Consensus 115 ~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~ 188 (262)
T cd00192 115 AKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLSRDVYDDDYYR----KKTGGKLPIRWMAPESLKDGIFTSKS 188 (262)
T ss_pred HHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccccccccccccc----cccCCCcCccccCHHHhccCCcchhh
Confidence 2368899999999999999999986 7999999999998876543200 00112345667888888777777788
Q ss_pred CHHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFLN 537 (766)
Q Consensus 524 D~~~l~~~i~~~l~ 537 (766)
|++++...+.+++.
T Consensus 189 Di~slG~il~~l~~ 202 (262)
T cd00192 189 DVWSFGVLLWEIFT 202 (262)
T ss_pred ccHHHHHHHHHHHh
Confidence 99999887766653
No 96
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.47 E-value=4.5e-13 Score=148.55 Aligned_cols=85 Identities=15% Similarity=0.062 Sum_probs=64.1
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 525 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~ 525 (766)
.+..+|..|++|+|+||.||++++ ++.++|+|||++..+....... ..+.......+++++....+..+...|+
T Consensus 226 ~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~sDi 299 (375)
T cd05104 226 GMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRNDSNYV----VKGNARLPVKWMAPESIFNCVYTFESDV 299 (375)
T ss_pred HHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccCccccc----ccCCCCCCcceeChhHhcCCCCCCCCCH
Confidence 467889999999999999999985 7889999999998775432211 1111122345788888877778888999
Q ss_pred HHHHHHHHHHH
Q 004234 526 TAVRRTAQFFL 536 (766)
Q Consensus 526 ~~l~~~i~~~l 536 (766)
+++...+.+++
T Consensus 300 ~slG~~l~ell 310 (375)
T cd05104 300 WSYGILLWEIF 310 (375)
T ss_pred HHHHHHHHHHH
Confidence 99998776655
No 97
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.47 E-value=2.7e-13 Score=155.36 Aligned_cols=186 Identities=16% Similarity=0.089 Sum_probs=123.3
Q ss_pred ccccccceeEEEEEee--c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~-G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+.+|.|++|.||+|.. + ++.||+|....+... ...
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~------------------------------------------~~~ 110 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER------------------------------------------QAA 110 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH------------------------------------------HHH
Confidence 6799999999999987 4 688999965211000 011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh--h-hcCCCHHHHHHHH--HHHHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL--D-ELGVDRKRLGRYA--VESYLEQI 450 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l--~-~~g~d~~~la~~l--v~~~l~qI 450 (766)
.+..|+..+..+ ++++|.-..-+.......+|||||++|++|.+.... . ...++...+...+ +...+..+
T Consensus 111 ~~~~E~~~l~~l-----~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 185 (478)
T PTZ00267 111 YARSELHCLAAC-----DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV 185 (478)
T ss_pred HHHHHHHHHHhC-----CCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 233455444433 223332222222334678999999999999875421 1 1224444433332 23447889
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|+||.||+++. ++.++|+|||++..+........ .....+++.+++++....+..+...|++++..
T Consensus 186 H~~~ivHrDlkp~NIll~~--~~~~kL~DFgla~~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~ 259 (478)
T PTZ00267 186 HSRKMMHRDLKSANIFLMP--TGIIKLGDFGFSKQYSDSVSLDV----ASSFCGTPYYLAPELWERKRYSKKADMWSLGV 259 (478)
T ss_pred HhCCEEECCcCHHhEEECC--CCcEEEEeCcCceecCCcccccc----ccccCCCccccCHhHhCCCCCCcHHhHHHHHH
Confidence 9999999999999999985 88999999999988765432111 11223677899999888777778889999998
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 260 ~l~el~t 266 (478)
T PTZ00267 260 ILYELLT 266 (478)
T ss_pred HHHHHHh
Confidence 7776653
No 98
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.47 E-value=6.8e-13 Score=139.96 Aligned_cols=184 Identities=15% Similarity=0.111 Sum_probs=119.4
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||+|++|+||+++. +|+.||+|+........ ...+-.+.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~---------------------------------------~~~~~~~~ 41 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK---------------------------------------KSGEKMAL 41 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc---------------------------------------chhhHHHH
Confidence 68999999999998 59999999873210000 00011122
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
.|...+.++ +++++.-..-+.+.....+++|||++|++|.+.... ...+.+...+...+ +...+..+|..|+
T Consensus 42 ~E~~il~~l-----~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 116 (277)
T cd05607 42 LEKEILEKV-----NSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI 116 (277)
T ss_pred HHHHHHHhc-----CCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 243333333 223332211122334567999999999999875432 22234544444332 2234788899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|.||+++. ++.++|+|||++..+...... ....+...+++++....+..+...|++++...+.++
T Consensus 117 vH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el 187 (277)
T cd05607 117 VYRDMKPENVLLDD--QGNCRLSDLGLAVELKDGKTI-------TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM 187 (277)
T ss_pred EEccCChHhEEEcC--CCCEEEeeceeeeecCCCcee-------eccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHH
Confidence 99999999999986 889999999998876543211 012356678888888777777889999998877766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 188 ~~ 189 (277)
T cd05607 188 VA 189 (277)
T ss_pred Hh
Confidence 53
No 99
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.47 E-value=4.9e-13 Score=148.13 Aligned_cols=138 Identities=16% Similarity=0.148 Sum_probs=95.2
Q ss_pred ccccccceeEEEEEee---cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL---KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l---~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+.||+|+||+||+|++ +|+.||||+..+..... . -+. ..-
T Consensus 24 ~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~-----------------------------~--~~~------~~~ 66 (365)
T PRK09188 24 AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWW-----------------------------S--KPL------ARH 66 (365)
T ss_pred cEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccc-----------------------------c--cHH------HHH
Confidence 6799999999999987 47888999863321100 0 000 112
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCc
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGF 455 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~Gf 455 (766)
.|.+|++.+.++.+ +++ +|.++. ....+|||||++|.+|.... .. ....+...+ ...+.++|..|+
T Consensus 67 ~~~~E~~iL~~L~h-----~~i-v~~l~~--~~~~~LVmE~~~G~~L~~~~---~~--~~~~~~~~i-~~aL~~lH~~gI 132 (365)
T PRK09188 67 LAAREIRALKTVRG-----IGV-VPQLLA--TGKDGLVRGWTEGVPLHLAR---PH--GDPAWFRSA-HRALRDLHRAGI 132 (365)
T ss_pred HHHHHHHHHHhccC-----CCC-CcEEEE--cCCcEEEEEccCCCCHHHhC---cc--chHHHHHHH-HHHHHHHHHCCC
Confidence 36677777766632 233 455664 35689999999999986421 11 112333333 356788999999
Q ss_pred cccCC-CCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 456 FHADP-HPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 456 fHaDp-HPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
+|+|+ ||+||+++. +++++|+|||++..+.+.
T Consensus 133 iHrDL~KP~NILv~~--~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 133 THNDLAKPQNWLMGP--DGEAAVIDFQLASVFRRR 165 (365)
T ss_pred eeCCCCCcceEEEcC--CCCEEEEECccceecccC
Confidence 99999 899999975 789999999999988654
No 100
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.47 E-value=1.7e-13 Score=152.81 Aligned_cols=189 Identities=18% Similarity=0.186 Sum_probs=136.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|.||+||+++. +|+.+|+|+........ . . ..-+
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~------------------------~-~--------------~~~~ 81 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG------------------------K-E--------------DRED 81 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccc------------------------c-c--------------cHHH
Confidence 5799999999999999 59999999873211100 0 0 1125
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
..+|.+.++++.. +..-|.++.+|. ..+..++|||+++|+.|-+..... .+.....+..+ +...++++|..|
T Consensus 82 v~~Ev~il~~l~~---hpniv~l~~~~e-~~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~g 155 (382)
T KOG0032|consen 82 VRREVAILQQLSG---HPNIVQLKDAFE-DPDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLG 155 (382)
T ss_pred HHHHHHHHHhccC---CCCEEEEEEEEE-cCCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5667777766543 333466666663 456789999999999999854322 24433333222 334578899999
Q ss_pred ccccCCCCCcEEEeecCC--CcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNG--GRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~--g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
++|+|+||+|+|+....+ +.++++|||++..+.+..+ ..-..+.+.+++++........+..|++++....
T Consensus 156 vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~-------~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~ 228 (382)
T KOG0032|consen 156 VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGER-------LHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVIL 228 (382)
T ss_pred ceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCce-------EeeecCCccccCchhhcCCCCCcccchhHHHHHH
Confidence 999999999999986333 5899999999999987322 2234679999999999877778889999999988
Q ss_pred HHHHHHH
Q 004234 533 QFFLNSF 539 (766)
Q Consensus 533 ~~~l~~~ 539 (766)
+.++..+
T Consensus 229 yiLL~G~ 235 (382)
T KOG0032|consen 229 YILLSGV 235 (382)
T ss_pred HHHhhCC
Confidence 8887654
No 101
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.47 E-value=4.3e-13 Score=140.29 Aligned_cols=184 Identities=12% Similarity=0.106 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||+|+||+||+|++ .+..||+|+.+.+.... .
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~-----------------------------------------~ 49 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDK-----------------------------------------Q 49 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHH-----------------------------------------H
Confidence 5799999999999986 25789999875432111 1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
+.+|.+|...+.++ .+ +++ .+...+ ......++||||++|++|.++.......++...+...+.+ ..+..+
T Consensus 50 ~~~~~~e~~~l~~l----~h-~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 50 RRGFLAEALTLGQF----DH-SNIVRLEGVI-TRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred HHHHHHHHHHHhcC----CC-CCcCeEEEEE-ecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12344555544443 22 332 222222 3345689999999999999875433233444444333322 346789
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|++|.||+++. ++.+++.|||.......... .. . ........+++++....+..+...|++++.-
T Consensus 124 H~~~iiH~dikp~nili~~--~~~~~l~dfg~~~~~~~~~~--~~-~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 196 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNS--DLVCKISGFRRLQEDKSEAI--YT-T--MSGKSPVLWAAPEAIQYHHFSSASDVWSFGI 196 (266)
T ss_pred HHCCEeeccccHhhEEEcC--CCcEEECCCcccccccccch--hc-c--cCCCCceeecCHHHHhhCCccchhHHHHHHH
Confidence 9999999999999999985 88999999998765432211 00 0 0011224567788777777778889999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 197 ~l~ell 202 (266)
T cd05064 197 VMWEVM 202 (266)
T ss_pred HHHHHh
Confidence 766543
No 102
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.47 E-value=2.4e-13 Score=145.10 Aligned_cols=184 Identities=17% Similarity=0.110 Sum_probs=114.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+...... ....
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------------~~~~ 49 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-----------------------------------------TPFT 49 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-----------------------------------------cchh
Confidence 6899999999999998 58999999874221100 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|+..+..+ . ++++....-+.......++||||++|. +.+.........+...+...+.+ ..+..+|..|
T Consensus 50 ~~~E~~~l~~l----~-h~niv~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 123 (303)
T cd07869 50 AIREASLLKGL----K-HANIVLLHDIIHTKETLTLVFEYVHTD-LCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY 123 (303)
T ss_pred HHHHHHHHhhC----C-CCCcCeEEEEEecCCeEEEEEECCCcC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23444444433 2 233332222223356679999999864 44432222233455544443333 3478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~ 533 (766)
++|+|+||+||+++. ++.++|+|||++...+...... .-..++..++++++..- .......|++++...+.
T Consensus 124 ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 195 (303)
T cd07869 124 ILHRDLKPQNLLISD--TGELKLADFGLARAKSVPSHTY------SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFV 195 (303)
T ss_pred eecCCCCHHHEEECC--CCCEEECCCCcceeccCCCccC------CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHH
Confidence 999999999999986 8899999999987654321110 00123556777776542 33455679999988776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 196 ~l~~ 199 (303)
T cd07869 196 EMIQ 199 (303)
T ss_pred HHHh
Confidence 6553
No 103
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.47 E-value=3e-13 Score=143.46 Aligned_cols=181 Identities=13% Similarity=0.064 Sum_probs=113.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||+|+.+...... . ...
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---------------------------~--------------~~~ 49 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG---------------------------A--------------PCT 49 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCC---------------------------c--------------chh
Confidence 6799999999999998 58999999874321100 0 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
+.+|.+.+.++ . +++| .+++. ......++||||++| ++.+.........+...+...+ +-..+..+|.
T Consensus 50 ~~~E~~~l~~l----~-h~ni--v~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 121 (288)
T cd07871 50 AIREVSLLKNL----K-HANI--VTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK 121 (288)
T ss_pred HHHHHHHHHhC----C-CCCE--eeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23344444443 2 2333 23332 233456899999998 6666543222223333333222 2234678899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~ 531 (766)
.|++|+|+||.||+++. ++.++++|||++.......... .-..+...++++++..- ...+...|++++...
T Consensus 122 ~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~ 193 (288)
T cd07871 122 RKILHRDLKPQNLLINE--KGELKLADFGLARAKSVPTKTY------SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCI 193 (288)
T ss_pred CCcccCCCCHHHEEECC--CCCEEECcCcceeeccCCCccc------cCceecccccChHHhcCCcccCcHHHHHHHHHH
Confidence 99999999999999986 8899999999987654322110 01123556777776643 234566799999877
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 194 l~~l~ 198 (288)
T cd07871 194 LYEMA 198 (288)
T ss_pred HHHHH
Confidence 76654
No 104
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.47 E-value=5.3e-13 Score=138.26 Aligned_cols=179 Identities=14% Similarity=0.150 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+.+|+|++|.||+|..+|+.|++|..+.+.. .-+|.
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~--------------------------------------------~~~~~ 47 (256)
T cd05082 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT--------------------------------------------AQAFL 47 (256)
T ss_pred eeecccCCCeEEEEEEcCCcEEEEEeCCCch--------------------------------------------HHHHH
Confidence 6799999999999999999999997632100 01344
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
+|+..+.++. +..-+.....+.+..+..+++|||++|++|.++...... ..+...+...+.+ ..+..+|..|+
T Consensus 48 ~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 123 (256)
T cd05082 48 AEASVMTQLR----HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF 123 (256)
T ss_pred HHHHHHHhCC----CCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 5555555442 222222222333334567999999999999986543222 1333433333322 34788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|+||++++ ++.++++|||++........ .......++++++...+..+...|++++.-.+.++
T Consensus 124 ~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l 192 (256)
T cd05082 124 VHRDLAARNVLVSE--DNVAKVSDFGLTKEASSTQD---------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192 (256)
T ss_pred eccccchheEEEcC--CCcEEecCCccceeccccCC---------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHH
Confidence 99999999999986 89999999999876543221 11223457888888777777888999998776655
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 193 ~ 193 (256)
T cd05082 193 Y 193 (256)
T ss_pred H
Confidence 4
No 105
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.47 E-value=6.1e-13 Score=140.94 Aligned_cols=186 Identities=17% Similarity=0.098 Sum_probs=122.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.||||+........ -..+..
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~~~~ 46 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------------RKGEAM 46 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh---------------------------------------hhhHHH
Confidence 5699999999999998 58999999873321100 011234
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|++.+.++. +..-+.+...+ ......+++|||++|+.|.+..... ...++...+...+.+ ..+..+|..
T Consensus 47 ~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 121 (285)
T cd05605 47 ALNEKQILEKVN----SRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE 121 (285)
T ss_pred HHHHHHHHHhcC----CCCEeeeeeee-cCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 455666555542 21112222222 2335689999999999998754322 223444444333333 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++++|||++..+...... .-..+...++++++..-+..+...|++++...+.
T Consensus 122 ~ivH~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~ 192 (285)
T cd05605 122 RIVYRDLKPENILLDD--YGHIRISDLGLAVEIPEGETI-------RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIY 192 (285)
T ss_pred CcEecCCCHHHEEECC--CCCEEEeeCCCceecCCCCcc-------ccccCCCCccCcHHhcCCCCCccccchhHHHHHH
Confidence 9999999999999985 789999999998876533211 0112456677888876666677789999987776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 193 el~~ 196 (285)
T cd05605 193 EMIE 196 (285)
T ss_pred HHHH
Confidence 6553
No 106
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.46 E-value=3e-13 Score=142.48 Aligned_cols=186 Identities=16% Similarity=0.171 Sum_probs=119.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+...... +....
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~----------------------------------~~~~~------ 46 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE----------------------------------EVKET------ 46 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccc----------------------------------cchhh------
Confidence 5799999999999999 58999999874321100 00111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+. +..-+.+..++ +.....++||||++|..+..+... ..+.+...+...+.+ ..+..+|..|
T Consensus 47 ~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 47 TLRELKMLRTLK----QENIVELKEAF-RRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred HHHHHHHHHhCC----CccccchhhhE-ecCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 122333332221 11112222222 234567999999999877655322 223444444333332 3477889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||+||+++. ++.++|+|||++..+......... ...++..++++++...+..+...|++++...+.+
T Consensus 121 i~H~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (287)
T cd07848 121 IVHRDIKPENLLISH--NDVLKLCDFGFARNLSEGSNANYT-----EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGE 193 (287)
T ss_pred eecCCCCHHHEEEcC--CCcEEEeeccCccccccccccccc-----ccccccccCCcHHHcCCCCCCchhHHhHHHHHHH
Confidence 999999999999985 889999999999887543222111 1224566788888776667778899999987766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 194 l~~ 196 (287)
T cd07848 194 LSD 196 (287)
T ss_pred HHh
Confidence 653
No 107
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.46 E-value=2.4e-13 Score=150.41 Aligned_cols=186 Identities=19% Similarity=0.211 Sum_probs=119.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+....- + ... ...-.
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-------~---------------------------~~~-----~~~~~ 89 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-------M---------------------------IKR-----SDSAF 89 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-------h---------------------------hhh-----hhHHH
Confidence 6799999999999998 58999999873210 0 000 00112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+..+ +++++.-..-+.+.....++||||++|++|.++.. ...++...+.... +-..+..+|..|
T Consensus 90 ~~~e~~il~~~-----~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ 162 (370)
T cd05596 90 FWEERDIMAHA-----NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMS--NYDIPEKWARFYTAEVVLALDAIHSMG 162 (370)
T ss_pred HHHHHHHHHhC-----CCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33344333332 22332211122233456799999999999988653 2233433333222 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc----CCCCCCCCHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM----GVLVPTGDTTAVRR 530 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l----G~~~~~~D~~~l~~ 530 (766)
++|+|+||.||+++. ++.++|+|||++..+....... .....+.+.++++++..- +..+...|++++..
T Consensus 163 ivHrDLkp~NILl~~--~~~~kL~DfG~~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGv 235 (370)
T cd05596 163 FIHRDVKPDNMLLDK--SGHLKLADFGTCMKMDANGMVR-----CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 235 (370)
T ss_pred eeccCCCHHHEEEcC--CCCEEEEeccceeeccCCCccc-----CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhH
Confidence 999999999999986 8999999999998775432110 012346778888988753 23566789999998
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 236 ilyellt 242 (370)
T cd05596 236 FLYEMLV 242 (370)
T ss_pred HHHHHHh
Confidence 7776653
No 108
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.46 E-value=2.8e-13 Score=156.12 Aligned_cols=122 Identities=12% Similarity=0.128 Sum_probs=88.3
Q ss_pred eEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 410 QILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 410 ~vLVMEyieG~~L~d~~~l~~---~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
.++||||++|++|.+...... ..+....+...+.+ ..++.+|..|++|+|+||.||+++. ++.++|+|||++.
T Consensus 114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~--~~~vkL~DFGls~ 191 (496)
T PTZ00283 114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS--NGLVKLGDFGFSK 191 (496)
T ss_pred EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--CCCEEEEecccCe
Confidence 579999999999988653211 12334443333333 3478899999999999999999986 8899999999998
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 485 SISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 485 ~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
.+......... ....+++.++++++...+..+...|++++...+.+++.
T Consensus 192 ~~~~~~~~~~~----~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt 240 (496)
T PTZ00283 192 MYAATVSDDVG----RTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT 240 (496)
T ss_pred ecccccccccc----ccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH
Confidence 76543221111 11246778899999887777888999999988777654
No 109
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.46 E-value=7.6e-13 Score=137.19 Aligned_cols=181 Identities=19% Similarity=0.249 Sum_probs=121.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.|++|+...+.... .+-+
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~~~~ 45 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEA-----------------------------------------IQKQ 45 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChH-----------------------------------------HHHH
Confidence 5799999999999999 48999999875432211 1112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh-
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS- 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~- 452 (766)
+.+|...+.++. ++++ .+...+ ...+..+++|||++|.+|.++........+...+...+.+ ..+..+|.
T Consensus 46 ~~~e~~~l~~~~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 46 ILRELDILHKCN-----SPYIVGFYGAF-YNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred HHHHHHHHHHCC-----CCchhhhheee-ecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 333433333321 2222 122222 2246679999999999999875432233444444333322 23677888
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|+||++++ ++.++|+|||.+..+....... ..++..++.++...........|++++...+
T Consensus 120 ~~i~H~dl~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~--------~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l 189 (265)
T cd06605 120 HKIIHRDVKPSNILVNS--RGQIKLCDFGVSGQLVNSLAKT--------FVGTSSYMAPERIQGNDYSVKSDIWSLGLSL 189 (265)
T ss_pred CCeecCCCCHHHEEECC--CCCEEEeecccchhhHHHHhhc--------ccCChhccCHHHHcCCCCCchhhHHHHHHHH
Confidence 99999999999999986 8899999999988775433221 3456678888888777677778999998777
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 190 ~~l~ 193 (265)
T cd06605 190 IELA 193 (265)
T ss_pred HHHH
Confidence 6655
No 110
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.46 E-value=1.7e-12 Score=139.73 Aligned_cols=199 Identities=19% Similarity=0.200 Sum_probs=128.8
Q ss_pred HHHHHhCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 004234 280 IVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK 357 (766)
Q Consensus 280 iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~ 357 (766)
+...-++.++++.|.. .+.+|+|++|+||+|+. +|+.||+|+....-...
T Consensus 14 ~~~~~~~~~~~~~f~~--~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~-------------------------- 65 (317)
T cd06635 14 IAELFFKEDPEKLFTD--LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS-------------------------- 65 (317)
T ss_pred HHHHhcCCCchhhhhh--hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCc--------------------------
Confidence 4555677788888764 35799999999999998 58999999873221100
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH
Q 004234 358 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR 437 (766)
Q Consensus 358 ~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~ 437 (766)
.+ ...++.+|++.+.++. +..-+.+...+ ......++||||++| ++.+........++...
T Consensus 66 -------~~------~~~~~~~e~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~ 126 (317)
T cd06635 66 -------NE------KWQDIIKEVKFLQRIK----HPNSIEYKGCY-LREHTAWLVMEYCLG-SASDLLEVHKKPLQEVE 126 (317)
T ss_pred -------hH------HHHHHHHHHHHHHhCC----CCCEEEEEEEE-eeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHH
Confidence 00 1123445555444432 22222222222 234567999999987 56555433333345555
Q ss_pred HHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 438 LGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 438 la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
+...+.+ ..+..+|..|++|+|++|+||+++. ++.++++|||++...+.... ..+...++++++..
T Consensus 127 ~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~ 194 (317)
T cd06635 127 IAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASIASPANS----------FVGTPYWMAPEVIL 194 (317)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCCccccCCccc----------ccCCccccChhhhh
Confidence 4443332 3467889999999999999999985 88999999999876654321 12445567777653
Q ss_pred ---cCCCCCCCCHHHHHHHHHHHHH
Q 004234 516 ---MGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 516 ---lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
.+..++..|++++...+.+++.
T Consensus 195 ~~~~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 195 AMDEGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred cCCCCCCCccccHHHHHHHHHHHHh
Confidence 3556778899999887766553
No 111
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.46 E-value=7.9e-13 Score=140.07 Aligned_cols=186 Identities=16% Similarity=0.089 Sum_probs=123.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||+|+..+..... -..+..
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~ 46 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK---------------------------------------RKGESM 46 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh---------------------------------------hhHHHH
Confidence 5799999999999999 58999999874321100 001123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|.+.+.++. +...+.+...+ ...+..+++|||++|+.+.+..... ...++...+...+.+ ..+..+|..
T Consensus 47 ~~~E~~il~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 47 ALNEKQILEKVN----SQFVVNLAYAY-ETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred HHHHHHHHHHcC----CcCceeEEEEE-ecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445665555543 21122222222 2345678999999999998754322 223555554444333 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||+||++++ ++.++++|||++..++..... ....+...++++++...+..+...|++++...+.
T Consensus 122 ~iiH~dikp~Nili~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 192 (285)
T cd05632 122 NTVYRDLKPENILLDD--YGHIRISDLGLAVKIPEGESI-------RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIY 192 (285)
T ss_pred CeeecCCCHHHEEECC--CCCEEEecCCcceecCCCCcc-------cCCCCCcCccChHHhcCCCCCcccchHHHHHHHH
Confidence 9999999999999985 789999999998776533211 0123566778888887677777889999987766
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 193 ~l~~ 196 (285)
T cd05632 193 EMIE 196 (285)
T ss_pred HHHh
Confidence 6543
No 112
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.46 E-value=5.8e-14 Score=153.64 Aligned_cols=191 Identities=19% Similarity=0.245 Sum_probs=132.3
Q ss_pred CChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHH
Q 004234 287 APLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIY 364 (766)
Q Consensus 287 ~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~ 364 (766)
.+++..|..+ +-||.||||.||+|.. .++.||+|+..-+-.+
T Consensus 9 ~~~~~~~~~~--~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~---------------------------------- 52 (467)
T KOG0201|consen 9 IDPELLYTKL--ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE---------------------------------- 52 (467)
T ss_pred CCcccccccc--hhccccccceeeeeeeccccceEEEEEechhhcc----------------------------------
Confidence 3455666666 4699999999999999 5999999998221111
Q ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH--
Q 004234 365 DECASVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR-- 440 (766)
Q Consensus 365 ~E~~~~l~~ElDf~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~-- 440 (766)
+|. +-+.+|+.+..+.+ |+.+....+ + ..+..+++|||+.|+++.++...... .+...++.
T Consensus 53 deI-ediqqei~~Ls~~~~~~it~yygsy-----------l--~g~~LwiiMey~~gGsv~~lL~~~~~-~~E~~i~~il 117 (467)
T KOG0201|consen 53 DEI-EDIQQEISVLSQCDSPNITEYYGSY-----------L--KGTKLWIIMEYCGGGSVLDLLKSGNI-LDEFEIAVIL 117 (467)
T ss_pred hhh-HHHHHHHHHHHhcCcchHHhhhhhe-----------e--ecccHHHHHHHhcCcchhhhhccCCC-Cccceeeeeh
Confidence 111 12334444444433 333322221 1 14667999999999999997543322 13333332
Q ss_pred HHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004234 441 YAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 520 (766)
Q Consensus 441 ~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~ 520 (766)
..+...+..+|.++.+|+|+|+.||++.. +|.+++.|||.+++++...... ..| -+++-+|+++++..--..
T Consensus 118 re~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa~ql~~~~~rr--~tf----vGTPfwMAPEVI~~~~Y~ 189 (467)
T KOG0201|consen 118 REVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVAGQLTNTVKRR--KTF----VGTPFWMAPEVIKQSGYD 189 (467)
T ss_pred HHHHHHhhhhhhcceecccccccceeEec--cCcEEEEecceeeeeechhhcc--ccc----cccccccchhhhcccccc
Confidence 23445588899999999999999999996 7999999999999998766543 233 358999999999964567
Q ss_pred CCCCHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFL 536 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l 536 (766)
..+|+++|.-.+.++.
T Consensus 190 ~KADIWSLGITaiEla 205 (467)
T KOG0201|consen 190 TKADIWSLGITAIELA 205 (467)
T ss_pred chhhhhhhhHHHHHHh
Confidence 7889999987665543
No 113
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.46 E-value=8.6e-14 Score=147.94 Aligned_cols=187 Identities=16% Similarity=0.147 Sum_probs=122.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+-|++|+||.||||++ +++-||+|-.+++-+.. +. .+ +-.+|++
T Consensus 82 nrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~-----------------------GF--PI---------tsLREIn 127 (419)
T KOG0663|consen 82 NRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE-----------------------GF--PI---------TSLREIN 127 (419)
T ss_pred hhcccCcceeEEEeccCCcceeEEeeecccccccC-----------------------CC--cc---------hhHHHHH
Confidence 5699999999999999 58999999886654322 11 11 1123333
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
.+.+++ +..-|.+-.|+..- -+..+||||||+- .|..+...-...+...++-....+ ..++.+|..
T Consensus 128 ------iLl~~~----H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~ 196 (419)
T KOG0663|consen 128 ------ILLKAR----HPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN 196 (419)
T ss_pred ------HHHhcC----CCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc
Confidence 333332 33345566655432 2457999999985 344332222222333333222222 347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
.++|||+||.|+|+++ .|.+++.|||+++.++.. ...+..+++.+..+-++ .++..-..+...|++++.-.+.
T Consensus 197 wilHRDLK~SNLLm~~--~G~lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPE----LLLG~~tyst~iDMWSvGCI~a 269 (419)
T KOG0663|consen 197 WILHRDLKTSNLLLSH--KGILKIADFGLAREYGSP-LKPYTPLVVTLWYRAPE----LLLGAKTYSTAVDMWSVGCIFA 269 (419)
T ss_pred eeEecccchhheeecc--CCcEEecccchhhhhcCC-cccCcceEEEeeecCHH----HhcCCcccCcchhhhhHHHHHH
Confidence 9999999999999996 899999999999999765 34456666666555554 3344445667789999998877
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 270 E~l~ 273 (419)
T KOG0663|consen 270 ELLT 273 (419)
T ss_pred HHHh
Confidence 7664
No 114
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.46 E-value=1.8e-12 Score=133.37 Aligned_cols=185 Identities=13% Similarity=0.074 Sum_probs=123.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|+||+|+. +|+.|++|......... ...-+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------------------------------~~~~~ 45 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNR----------------------------------------REREE 45 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCH----------------------------------------HHHHH
Confidence 5799999999999998 58999999763210000 01123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|.+.+.++. ++++.-..-+.......+++|||++|.+|.++.... ....+...+...+.+ ..+..+|..
T Consensus 46 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 46 AIDEARVLAKLD-----SSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred HHHHHHHHHhcC-----CCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445555444432 232222221222335679999999999999865432 233444444443322 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.+++.|||++..+....... ....+.+.++++++...+..++..|++++...+.
T Consensus 121 ~i~h~dl~~~nili~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 192 (256)
T cd08529 121 KILHRDIKSLNLFLDA--YDNVKIGDLGVAKLLSDNTNFA------NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLY 192 (256)
T ss_pred CcccCCCCcceEEEeC--CCCEEEcccccceeccCccchh------hccccCccccCHHHhcCCCCCCccchHHHHHHHH
Confidence 9999999999999986 8899999999998876542211 1123456778888888887788899999987766
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 ~l~ 195 (256)
T cd08529 193 ECC 195 (256)
T ss_pred HHH
Confidence 654
No 115
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.45 E-value=7.9e-13 Score=143.93 Aligned_cols=180 Identities=16% Similarity=0.194 Sum_probs=119.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.+ +|+.||+|+.+...... . .-+
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~------~~~ 49 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPA-----------------------------------I------RNQ 49 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHH-----------------------------------H------HHH
Confidence 5799999999999999 58999999875432211 0 112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS- 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~- 452 (766)
+.+|++.+..+. +++| .+..++. .....+|||||++|++|.++.... ...+...+..... -..+..+|.
T Consensus 50 ~~~E~~~l~~l~-----h~~iv~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~ 122 (333)
T cd06650 50 IIRELQVLHECN-----SPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK 122 (333)
T ss_pred HHHHHHHHHHCC-----CCcccceeEEEE-ECCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 445555555442 2332 2223332 346789999999999999875322 1233333222222 223566775
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
+|++|+|+||+||+++. ++.++|+|||++..+..... ....+...++++++......+...|++++...+
T Consensus 123 ~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 192 (333)
T cd06650 123 HKIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMA--------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSL 192 (333)
T ss_pred CCEEecCCChhhEEEcC--CCCEEEeeCCcchhhhhhcc--------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHH
Confidence 58999999999999986 78999999999876643221 112356678888888766667778999998877
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 193 ~~l~ 196 (333)
T cd06650 193 VEMA 196 (333)
T ss_pred HHHH
Confidence 6655
No 116
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.45 E-value=9.6e-13 Score=137.11 Aligned_cols=185 Identities=16% Similarity=0.186 Sum_probs=121.0
Q ss_pred ccccccceeEEEEEeec-----CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-----G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|.||+|++. ...||||+.+++.... .
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~-----------------------------------------~ 48 (266)
T cd05033 10 KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDK-----------------------------------------Q 48 (266)
T ss_pred eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChH-----------------------------------------H
Confidence 68999999999999982 3579999875542211 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
.-+|..|...+.++. + +++ .+...+ ......+++|||++|++|.++.......++...+...+.+ ..+..+
T Consensus 49 ~~~~~~e~~~l~~l~----h-~~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 49 RLDFLTEASIMGQFD----H-PNIIRLEGVV-TKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred HHHHHHHHHHHHhCC----C-CCcceEeEEE-ecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 123445555444442 2 222 222222 2345679999999999999875433333455555444333 336788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|++|.||+++. ++.++++|||++..+......... ........+++++....+..++..|++++..
T Consensus 123 h~~~i~H~di~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~ 196 (266)
T cd05033 123 SEMNYVHRDLAARNILVNS--NLVCKVSDFGLSRRLEDSEATYTT----KGGKIPIRWTAPEAIAYRKFTSASDVWSFGI 196 (266)
T ss_pred HhCCcccCCCCcceEEEcC--CCCEEECccchhhcccccccceec----cCCCCCccccChhhhccCCCccccchHHHHH
Confidence 9999999999999999986 889999999999987522111000 0112234577788777677778889999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 197 ~l~~l~ 202 (266)
T cd05033 197 VMWEVM 202 (266)
T ss_pred HHHHHH
Confidence 766543
No 117
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.45 E-value=7.9e-13 Score=138.80 Aligned_cols=186 Identities=16% Similarity=0.164 Sum_probs=120.1
Q ss_pred ccccccceeEEEEEeec--C-----eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK--G-----EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--G-----~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|.||+|... + ..|++|..+...... .
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~-----------------------------------~---- 51 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPK-----------------------------------V---- 51 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHH-----------------------------------H----
Confidence 67999999999999982 3 579999874322111 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRK 436 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~~ 436 (766)
.-+|.+|.+.+.++. ++++....-+.......+++|||++|++|.++..... ..++..
T Consensus 52 --~~~~~~ei~~l~~l~-----h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (283)
T cd05048 52 --QQEFRQEAELMSDLQ-----HPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCS 124 (283)
T ss_pred --HHHHHHHHHHHHhcC-----CcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHH
Confidence 112444555444432 2332222222233456799999999999988653221 123333
Q ss_pred HHHHHHH--HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004234 437 RLGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 514 (766)
Q Consensus 437 ~la~~lv--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~ 514 (766)
.+...+. ...+..+|..|++|+|++|.||++++ ++.++|+|||++..+......... .....+..+++++..
T Consensus 125 ~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~L~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~ 198 (283)
T cd05048 125 DFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE--GLTVKISDFGLSRDIYSADYYRVQ----SKSLLPVRWMPPEAI 198 (283)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC--CCcEEECCCcceeecccccccccc----CCCcccccccCHHHh
Confidence 3333332 23367889999999999999999986 789999999999876432211100 011224568888888
Q ss_pred HcCCCCCCCCHHHHHHHHHHHH
Q 004234 515 QMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 515 ~lG~~~~~~D~~~l~~~i~~~l 536 (766)
..+..++..|++++...+.+++
T Consensus 199 ~~~~~~~~sDv~slG~il~el~ 220 (283)
T cd05048 199 LYGKFTTESDIWSFGVVLWEIF 220 (283)
T ss_pred ccCcCchhhhHHHHHHHHHHHH
Confidence 7777788899999988777665
No 118
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.45 E-value=9.6e-13 Score=138.34 Aligned_cols=180 Identities=18% Similarity=0.183 Sum_probs=120.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|+||+|.. +|+.||||+....... ...-+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~-----------------------------------------~~~~~ 48 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE-----------------------------------------DEIED 48 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccH-----------------------------------------HHHHH
Confidence 5699999999999998 5899999986311000 01123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+.+|..-+.++ .+ ++ +++++. ......++||||++|++|.+... ....+...+...+.+ ..+..+|.
T Consensus 49 ~~~e~~~l~~l----~h-~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~ 119 (277)
T cd06640 49 IQQEITVLSQC----DS-PY--VTKYYGSYLKGTKLWIIMEYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHS 119 (277)
T ss_pred HHHHHHHHHhC----CC-CC--EeeEEEEEEECCEEEEEEecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 44555444433 12 22 333333 23456899999999999988653 223444444443333 23677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|+||+++. ++.++++|||++..+....... ....++..++++++...+..+...|++++...+
T Consensus 120 ~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 120 EKKIHRDIKAANVLLSE--QGDVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred CCccCcCCChhhEEEcC--CCCEEEcccccceeccCCcccc------ccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 99999999999999985 8899999999998876543211 111244556778877766677788999998777
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 192 ~el~ 195 (277)
T cd06640 192 IELA 195 (277)
T ss_pred HHHH
Confidence 6654
No 119
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.45 E-value=2.3e-13 Score=155.29 Aligned_cols=186 Identities=17% Similarity=0.192 Sum_probs=116.0
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.+.||.|+||||-+|.. +|+.|||||.+-.-.- ..+ +
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f-------------------------------------~~Q---~- 229 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF-------------------------------------LRQ---A- 229 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChHH-------------------------------------HHH---H-
Confidence 36899999999999999 5999999998432110 000 0
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHHHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQI 450 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~l--v~~~l~qI 450 (766)
..|.+-++.+.+ ........+-+.|. .+-+..+||.|.++ ..|.+++.. ...|++...+.... +-..|..+
T Consensus 230 --~~Ei~iL~~ln~-~d~~~~~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L 305 (586)
T KOG0667|consen 230 --QIEIRILELLNK-HDPDDKYNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFL 305 (586)
T ss_pred --HHHHHHHHHHhc-cCCCCCeeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 123334444443 11222334444444 23567799999874 566676433 23345544332222 22346677
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
++.|++|||+||+|||+.+.....|++||||.+...++..-. | +.+-..+- -+.++.+ -.....|+++|.-
T Consensus 306 ~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vyt-Y---iQSRfYRA----PEVILGl-pY~~~IDmWSLGC 376 (586)
T KOG0667|consen 306 HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYT-Y---IQSRFYRA----PEVILGL-PYDTAIDMWSLGC 376 (586)
T ss_pred HhCCeeeccCChhheeeccCCcCceeEEecccccccCCccee-e---eecccccc----chhhccC-CCCCccceeehhh
Confidence 899999999999999998755568999999999988775432 2 12222222 2333333 3456789999998
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.++.-
T Consensus 377 IlAEL~t 383 (586)
T KOG0667|consen 377 ILAELFT 383 (586)
T ss_pred hHHhHhc
Confidence 8776654
No 120
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.45 E-value=8.6e-13 Score=142.58 Aligned_cols=186 Identities=18% Similarity=0.142 Sum_probs=117.7
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|.||+|+. +|+.||||+.++..... . ++. -.+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~-------------------------------~~~-------~~~ 42 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-D-------------------------------DDV-------ECT 42 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-c-------------------------------chH-------HHH
Confidence 589999999999998 48899999885432100 0 000 011
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gf 455 (766)
..|...+.. .+ +++++.-..-+.......+++|||++|++|.+.... ....+...+...+ +...+..+|..|+
T Consensus 43 ~~e~~~l~~---~~-~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i 117 (316)
T cd05619 43 MVEKRVLSL---AW-EHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGI 117 (316)
T ss_pred HHHHHHHHh---cc-CCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 222222211 11 233332111222334567899999999999876432 1223333333222 2234788999999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|+||.||+++. ++.++|+|||++.......... .-..++..++++++......+...|++++...+.++
T Consensus 118 vHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05619 118 VYRDLKLDNILLDT--DGHIKIADFGMCKENMLGDAKT------CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEM 189 (316)
T ss_pred EeCCCCHHHEEECC--CCCEEEccCCcceECCCCCCce------eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHH
Confidence 99999999999986 8899999999987532211100 112356778889988776777889999999887766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 190 ~~ 191 (316)
T cd05619 190 LI 191 (316)
T ss_pred Hh
Confidence 53
No 121
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.45 E-value=1e-12 Score=141.86 Aligned_cols=184 Identities=20% Similarity=0.149 Sum_probs=118.5
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
-||.|++|.||+|+. +|+.||||+.+...... - ++ .-.+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------------------------~----~~-------~~~~ 42 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ----------------------------D----DD-------VECT 42 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh----------------------------h----hH-------HHHH
Confidence 489999999999999 58899999874321000 0 00 0012
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
..|.+.+.... ++++ +++++. +.....++||||++|++|.+.... ...++...+...+.+ ..+..+|..
T Consensus 43 ~~e~~il~~~~----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~ 115 (318)
T cd05570 43 MTEKRVLALAG----KHPF--LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHER 115 (318)
T ss_pred HHHHHHHHhcc----CCCC--ccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 23333333221 2333 233332 334567999999999999875432 223444444333322 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++|+|||++.......... ....+++.++++++...+..+...|++++...+.
T Consensus 116 ~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~ 187 (318)
T cd05570 116 GIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGILGGVTT------STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLY 187 (318)
T ss_pred CeEccCCCHHHeEECC--CCcEEecccCCCeecCcCCCcc------cceecCccccCHHHhcCCCCCcchhhhhHHHHHH
Confidence 9999999999999986 8899999999886532211110 1123577888999887777778889999988776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 188 ~l~~ 191 (318)
T cd05570 188 EMLA 191 (318)
T ss_pred HHhh
Confidence 6653
No 122
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.45 E-value=8.7e-13 Score=138.06 Aligned_cols=186 Identities=18% Similarity=0.183 Sum_probs=121.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|+||+|.. +|+.|+||+.+...... + .-+
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~-------~~~ 45 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDD----------------------------------D-------VSD 45 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCch----------------------------------h-------HHH
Confidence 5799999999999998 58999999875432211 0 002
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|...+.++.. ..++++.-+.-+..-.+..+++|||++|++|.++.... .++...+...+ +...+..+|..|
T Consensus 46 ~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~ 121 (277)
T cd06917 46 IQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVG 121 (277)
T ss_pred HHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3344544444432 12333322222223345679999999999999875332 34433333322 233467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~-~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||++++ ++.++++|||.+..+........ ...+...+++++....|. .+...|++++...+.
T Consensus 122 i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 193 (277)
T cd06917 122 VIHRDIKAANILVTN--TGNVKLCDFGVAALLNQNSSKRS------TFVGTPYWMAPEVITEGKYYDTKADIWSLGITIY 193 (277)
T ss_pred cccCCcCHHHEEEcC--CCCEEEccCCceeecCCCccccc------cccCCcceeCHHHhccCCccccchhHHHHHHHHH
Confidence 999999999999986 88999999999988765432111 112455667777765554 356789999988777
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 194 ~ll~ 197 (277)
T cd06917 194 EMAT 197 (277)
T ss_pred HHHh
Confidence 6653
No 123
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.44 E-value=7.5e-13 Score=137.87 Aligned_cols=187 Identities=16% Similarity=0.199 Sum_probs=119.2
Q ss_pred ccccccceeEEEEEee--cCe---eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE---EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~---~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|+||+|++ +|+ .|+||..+++.... .
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~ 49 (268)
T cd05063 11 KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEK-----------------------------------------Q 49 (268)
T ss_pred eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHH-----------------------------------------H
Confidence 6899999999999998 343 79999875442211 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~ 451 (766)
.-+|.+|++.+.++ .+..-+.+...+ ......+++|||++|++|.++........+...+...+.+ ..+..+|
T Consensus 50 ~~~~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 124 (268)
T cd05063 50 RQDFLSEASIMGQF----SHHNIIRLEGVV-TKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS 124 (268)
T ss_pred HHHHHHHHHHHhcC----CCCCeeEEEEEE-ccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11344455444333 222222222222 2335679999999999998875433223444444433322 3467889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|+||.||+++. ++.++++|||+...+.......... ........++++++...+..+...|++++.-.
T Consensus 125 ~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~i 199 (268)
T cd05063 125 DMNYVHRDLAARNILVNS--NLECKVSDFGLSRVLEDDPEGTYTT---SGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV 199 (268)
T ss_pred HCCeeccccchhhEEEcC--CCcEEECCCccceecccccccceec---cCCCcCceecCHHHhhcCCcChHhHHHHHHHH
Confidence 999999999999999985 8899999999998775433222110 00111234677777776666778899998876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 200 l~ell 204 (268)
T cd05063 200 MWEVM 204 (268)
T ss_pred HHHHH
Confidence 65543
No 124
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.44 E-value=3.6e-13 Score=145.08 Aligned_cols=184 Identities=15% Similarity=0.178 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|.||+++. +|+.||||+.+..... ...
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~----------------------------------------~~~ 41 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK----------------------------------------VRD 41 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh----------------------------------------hhh
Confidence 4689999999999875 4789999987321000 001
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~ 451 (766)
...+.+|.+.+.++. +++|.-..-+.......++||||++|++|.+.... ...++...+...+. ...+..+|
T Consensus 42 ~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH 115 (318)
T cd05582 42 RVRTKMERDILAEVN-----HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLH 115 (318)
T ss_pred HHHHHHHHHHHHhCC-----CCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 112344555554442 23332221222334567999999999999876432 22244444333332 23477899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|+||.||+++. ++.++|+|||++........... ...+.+.+++++...-...+...|++++...
T Consensus 116 ~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 187 (318)
T cd05582 116 SLGIIYRDLKPENILLDE--EGHIKLTDFGLSKESIDHEKKAY------SFCGTVEYMAPEVVNRRGHTQSADWWSFGVL 187 (318)
T ss_pred HCCEecCCCCHHHeEECC--CCcEEEeeccCCcccCCCCCcee------cccCChhhcCHHHHcCCCCCCccceeccceE
Confidence 999999999999999986 88999999999876544321111 1235778888988876666777899998876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 188 l~el~ 192 (318)
T cd05582 188 MFEML 192 (318)
T ss_pred eeeec
Confidence 65544
No 125
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=5.4e-13 Score=146.29 Aligned_cols=187 Identities=18% Similarity=0.181 Sum_probs=125.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|.-|+||+|+. .++.||||+. |+...-+++ -.
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~i----------------------------------nLEkc~~~l-------d~ 70 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKII----------------------------------NLEKCNNDL-------DA 70 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEe----------------------------------ehhhhhhhH-------HH
Confidence 4699999999999998 6999999987 111111111 02
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhh-hhhcCCCHHHHHHHHHHH--HHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS-LDELGVDRKRLGRYAVES--YLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~-l~~~g~d~~~la~~lv~~--~l~qI~~~ 453 (766)
.++|..+|..+ ++|+|.--..---.....|+||-||.|+++.++.. .-..|++...++..+-+. .+.++|.+
T Consensus 71 l~kE~~~msl~-----~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~ 145 (516)
T KOG0582|consen 71 LRKEVQTMSLI-----DHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN 145 (516)
T ss_pred HHHHHHHhhhc-----CCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 35667777665 34444221111123456799999999999999754 334567777776665444 38889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-H-cCCCCCCCCHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-Q-MGVLVPTGDTTAVRRT 531 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~-~-lG~~~~~~D~~~l~~~ 531 (766)
|.+|||+|+||||++. +|.++|.|||....+-..-.++-.++ ....+.+.+|+++++ + .--..-+.|+++|.-.
T Consensus 146 G~IHRdvKAgnILi~~--dG~VkLadFgvsa~l~~~G~R~~~rf--~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGIT 221 (516)
T KOG0582|consen 146 GHIHRDVKAGNILIDS--DGTVKLADFGVSASLFDSGDRQVTRF--NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGIT 221 (516)
T ss_pred CceecccccccEEEcC--CCcEEEcCceeeeeecccCceeeEee--ccccCcccccChHHhhhcccCccchhhhhhhhHH
Confidence 9999999999999996 99999999998877644322221221 334568888888883 2 2122445788887765
Q ss_pred HHHH
Q 004234 532 AQFF 535 (766)
Q Consensus 532 i~~~ 535 (766)
+.++
T Consensus 222 A~EL 225 (516)
T KOG0582|consen 222 ACEL 225 (516)
T ss_pred HHHH
Confidence 5444
No 126
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.44 E-value=9.9e-13 Score=137.05 Aligned_cols=184 Identities=13% Similarity=0.096 Sum_probs=119.6
Q ss_pred ccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 301 IgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
||.|++|.||+|++ ++..||||+..+..... .. -+
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~-----------------------------------~~------~~ 41 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKS-----------------------------------VR------DE 41 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChH-----------------------------------HH------HH
Confidence 89999999999987 25679999875432111 00 13
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~G 454 (766)
|.+|+.-+.++ .+..-+.+..++ .....++||||++|++|.++.......++...+...+.+. .+..+|..|
T Consensus 42 ~~~E~~~l~~l----~h~~ii~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 115 (257)
T cd05115 42 MMREAEIMHQL----DNPYIVRMIGVC--EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN 115 (257)
T ss_pred HHHHHHHHHhc----CCCCeEEEEEEE--cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 44455544443 222223333322 1346799999999999998754333345555554444332 367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||+||+++. ++.++++|||++..+......... .........+++++....+..+...|++++...+.+
T Consensus 116 i~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 190 (257)
T cd05115 116 FVHRDLAARNVLLVN--QHYAKISDFGLSKALGADDSYYKA---RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWE 190 (257)
T ss_pred eeecccchheEEEcC--CCcEEeccCCccccccCCccceec---cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHH
Confidence 999999999999985 789999999999866543221100 000111345777887777777778899999877665
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 191 l~ 192 (257)
T cd05115 191 AF 192 (257)
T ss_pred Hh
Confidence 44
No 127
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.44 E-value=3.4e-13 Score=146.02 Aligned_cols=123 Identities=15% Similarity=0.145 Sum_probs=84.3
Q ss_pred ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecc
Q 004234 405 EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 482 (766)
Q Consensus 405 e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGl 482 (766)
+..+..++||||++|++|.+.... ...++...+...+.+ ..+..+|..|++|+|+||.||+++. ++.++|+|||+
T Consensus 66 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~ 142 (330)
T cd05586 66 QTDSDLYLVTDYMSGGELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGL 142 (330)
T ss_pred ecCCeEEEEEcCCCCChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCc
Confidence 335667999999999998775432 223444444333322 3478899999999999999999986 88999999999
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHHHHHH
Q 004234 483 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 483 v~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i~~~l 536 (766)
+......... .....++..+++++...-+ ......|++++...+.+++
T Consensus 143 a~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ell 191 (330)
T cd05586 143 SKANLTDNKT------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMC 191 (330)
T ss_pred CcCCCCCCCC------ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEec
Confidence 8764322111 0112357788888877532 2466789999886655544
No 128
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.44 E-value=4.6e-13 Score=137.92 Aligned_cols=185 Identities=18% Similarity=0.241 Sum_probs=123.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||+|+....-... .... .
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~----------------------------------~~~~------~ 44 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE----------------------------------EERE------E 44 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH----------------------------------HHHH------H
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc----------------------------------cccc------h
Confidence 5799999999999999 57899999884332111 0000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
...|+..+.++. ++++.-..-+.......+++|||++|.+|.++.. ....++...+...+.+ ..+..+|..|
T Consensus 45 ~~~e~~~~~~l~-----~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~ 118 (260)
T PF00069_consen 45 NIREIKILRRLR-----HPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKG 118 (260)
T ss_dssp HHHHHHHHHHHT-----BTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhcccccc-----cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 112555555552 2333322333333677899999999999988754 2333455544444433 2478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||+++. ++.++|+|||.+..++..... .....++..+.+++... ........|++++...+.
T Consensus 119 i~H~dikp~NIl~~~--~~~~~l~Dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 190 (260)
T PF00069_consen 119 IVHRDIKPENILLDE--NGEVKLIDFGSSVKLSENNEN------FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILY 190 (260)
T ss_dssp EEESSBSGGGEEEST--TSEEEESSGTTTEESTSTTSE------BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHH
T ss_pred ccccccccccccccc--ccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccc
Confidence 999999999999985 899999999998764211110 11123456677788877 666777789999988776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 191 ~l~~ 194 (260)
T PF00069_consen 191 ELLT 194 (260)
T ss_dssp HHHH
T ss_pred cccc
Confidence 6553
No 129
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.44 E-value=9e-13 Score=136.94 Aligned_cols=183 Identities=15% Similarity=0.126 Sum_probs=121.7
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|.||+|.+ +++.||||..+++-.. +-+|
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~-------------------------------------------~~~~ 48 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD-------------------------------------------PKDF 48 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCccc-------------------------------------------HHHH
Confidence 6899999999999998 6788999987543110 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHH--HHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVES--YLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~~--~l~qI~~~G 454 (766)
.+|...+.++. ++++.-..-+.......+++|||++|++|.++..... ...+...+...+.+. .+..+|..|
T Consensus 49 ~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (261)
T cd05068 49 LAEAQIMKKLR-----HPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN 123 (261)
T ss_pred HHHHHHHHHCC-----CCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 45555555542 2333222222334556799999999999998753222 234444444443332 367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||+||++++ ++.++++|||++..+........ .+ ......+++++....+..+...|++++...+.+
T Consensus 124 i~H~dl~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~-~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 196 (261)
T cd05068 124 YIHRDLAARNVLVGE--NNICKVADFGLARVIKEDIYEAR----EG-AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196 (261)
T ss_pred eeeccCCcceEEEcC--CCCEEECCcceEEEccCCccccc----CC-CcCceeccCccccccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 88999999999988763321100 00 011235667777766667778899999877766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 197 l~ 198 (261)
T cd05068 197 IV 198 (261)
T ss_pred HH
Confidence 54
No 130
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.44 E-value=6.4e-13 Score=142.87 Aligned_cols=184 Identities=14% Similarity=0.097 Sum_probs=118.9
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||+|++|+||+|++ +|+ .||||+.++.....
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 51 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK----------------------------------------- 51 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHH-----------------------------------------
Confidence 6899999999999997 344 48999874321111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQ 449 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~q 449 (766)
..-++..|+..+..+ +++++ .+.+. ......+++|||++++++.+........++...+.....+ ..+..
T Consensus 52 ~~~~~~~e~~~l~~l-----~h~ni--v~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~ 124 (316)
T cd05108 52 ANKEILDEAYVMASV-----DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 124 (316)
T ss_pred HHHHHHHHHHHHHhC-----CCCCC--CeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 011344455444433 22333 22222 1235578999999999998865433333444444443333 34788
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..|++|+|+||.||+++. ++.++|+|||++..+......... ........++++++...+..+...|++++.
T Consensus 125 LH~~~iiH~dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~~Di~slG 198 (316)
T cd05108 125 LEERRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLGADEKEYHA----EGGKVPIKWMALESILHRIYTHQSDVWSYG 198 (316)
T ss_pred HHhcCeeccccchhheEecC--CCcEEEccccccccccCCCcceec----cCCccceeecChHHhccCCCCchhhhHHHH
Confidence 99999999999999999985 789999999999887643321100 000112356777777767777888999998
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
..+.+++
T Consensus 199 v~l~el~ 205 (316)
T cd05108 199 VTVWELM 205 (316)
T ss_pred HHHHHHH
Confidence 7776654
No 131
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.44 E-value=1e-12 Score=135.27 Aligned_cols=187 Identities=20% Similarity=0.202 Sum_probs=121.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|.||+|.+ +|+.|++|..+..... +. .-.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~-----------------------------------~~------~~~~ 39 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP-----------------------------------DL------KRKF 39 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH-----------------------------------HH------HHHH
Confidence 3689999999999999 5999999976432111 00 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
.+|.+.+..+ +++++.....+.......+++|||++|.+|.++........+...+.....+ ..+..+|..|+
T Consensus 40 ~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i 114 (251)
T cd05041 40 LQEAEILKQY-----DHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC 114 (251)
T ss_pred HHHHHHHHhC-----CCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 4444444333 2333332222333456689999999999998875433333444444443333 33678899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|.||+++. ++.++|+|||++......... .. .........++.++....+..+...|++++...+.++
T Consensus 115 ~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~~~~-~~---~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l 188 (251)
T cd05041 115 IHRDLAARNCLVGE--NNVLKISDFGMSREEEGGIYT-VS---DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWET 188 (251)
T ss_pred ehhhcCcceEEEcC--CCcEEEeeccccccccCCcce-ec---cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHH
Confidence 99999999999986 889999999999866422100 00 0001112346777777777777888999998877665
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 189 ~t 190 (251)
T cd05041 189 FS 190 (251)
T ss_pred Hh
Confidence 53
No 132
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.43 E-value=1e-12 Score=143.71 Aligned_cols=195 Identities=17% Similarity=0.180 Sum_probs=119.7
Q ss_pred CCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004234 286 GAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (766)
Q Consensus 286 G~~~eeiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~ 362 (766)
|...-.++..|.. +.||.|++|.||+|.. .|+.||||+........
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------- 57 (355)
T cd07874 9 GDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ------------------------------- 57 (355)
T ss_pred CchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-------------------------------
Confidence 3333345555543 7899999999999998 58999999874322111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH
Q 004234 363 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKR 437 (766)
Q Consensus 363 i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~ 437 (766)
.... ++.+|...+..+ .+..-+.+..++. +.....+++|||++|.. .+... ...+...
T Consensus 58 ---~~~~------~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l-~~~~~---~~l~~~~ 120 (355)
T cd07874 58 ---THAK------RAYRELVLMKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANL-CQVIQ---MELDHER 120 (355)
T ss_pred ---HHHH------HHHHHHHHHHHh----CCCchhceeeeeeccccccccceeEEEhhhhcccH-HHHHh---hcCCHHH
Confidence 0001 122233323222 1211122222221 11234689999999853 33221 1234333
Q ss_pred HHHHHH--HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 438 LGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 438 la~~lv--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
+...+. -..+..+|..|++|+|+||+||+++. ++.++|+|||++......... ....++..++++++..
T Consensus 121 ~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~-------~~~~~t~~y~aPE~~~ 191 (355)
T cd07874 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVIL 191 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCCChHHEEECC--CCCEEEeeCcccccCCCcccc-------CCccccCCccCHHHHc
Confidence 333222 23478899999999999999999986 889999999999876543211 1123456678888876
Q ss_pred cCCCCCCCCHHHHHHHHHHHHH
Q 004234 516 MGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 516 lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
.....+..|++++...+.+++.
T Consensus 192 ~~~~~~~~DiwslG~il~el~~ 213 (355)
T cd07874 192 GMGYKENVDIWSVGCIMGEMVR 213 (355)
T ss_pred CCCCCchhhHHHHHHHHHHHHh
Confidence 6566778899999987776653
No 133
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.43 E-value=7.7e-13 Score=138.47 Aligned_cols=186 Identities=17% Similarity=0.121 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEee-c------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|.||+|+. + ++.||||+.+..... +
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~----- 50 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN-----------------------------------D----- 50 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH-----------------------------------H-----
Confidence 5799999999999987 2 378999986322111 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-------------cCCCHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------------LGVDRKRL 438 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------------~g~d~~~l 438 (766)
.+-+|.+|++.+.++. ++++.-..-+.......+++|||++|++|.++..... ..+....+
T Consensus 51 -~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 124 (280)
T cd05049 51 -ARKDFEREAELLTNFQ-----HENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQL 124 (280)
T ss_pred -HHHHHHHHHHHHHhcC-----CCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHH
Confidence 1124556666665552 2333222223334567899999999999998653211 11222222
Q ss_pred HHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004234 439 GRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 516 (766)
Q Consensus 439 a~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l 516 (766)
...+.+ ..+..+|..|++|+|++|+||+++. ++.++|+|||++..+........ .........++++++...
T Consensus 125 ~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~kl~d~g~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~ 198 (280)
T cd05049 125 LQIAVQIASGMVYLASQHFVHRDLATRNCLVGY--DLVVKIGDFGMSRDVYTTDYYRV----GGHTMLPIRWMPPESIMY 198 (280)
T ss_pred HHHHHHHHHHHHHHhhCCeeccccccceEEEcC--CCeEEECCcccceecccCcceec----CCCCcccceecChhhhcc
Confidence 222222 3367889999999999999999986 89999999999876533211000 001112456788888888
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 004234 517 GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 517 G~~~~~~D~~~l~~~i~~~l 536 (766)
+..++..|++++...+.+++
T Consensus 199 ~~~~~~~Di~slG~il~e~~ 218 (280)
T cd05049 199 RKFTTESDVWSFGVVLWEIF 218 (280)
T ss_pred CCcchhhhHHHHHHHHHHHH
Confidence 88888899999987776655
No 134
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.43 E-value=1.3e-12 Score=134.93 Aligned_cols=186 Identities=18% Similarity=0.195 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEee-c--C--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K--G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~--G--~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||+|++|.||+|.+ + | ..||||+.+++... + .
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-----------------------------------~------~ 39 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-----------------------------------D------I 39 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-----------------------------------H------H
Confidence 3689999999999998 2 3 36999988554321 0 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI 450 (766)
.-+|.+|.+.+.++. +..-+.+...+.. ...+++|||++|++|.+...... ...+...+...+.+ ..+..+
T Consensus 40 ~~~~~~e~~~l~~l~----h~~iv~~~~~~~~--~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l 113 (257)
T cd05040 40 MDDFLKEAAIMHSLD----HENLIRLYGVVLT--HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL 113 (257)
T ss_pred HHHHHHHHHHHhhcC----CCCccceeEEEcC--CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH
Confidence 113344444444442 2222333333333 67799999999999998653322 22344444333322 346788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|+||.||+++. ++.++++|||++..+.......... ........++.++.......+...|++++..
T Consensus 114 H~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~---~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~ 188 (257)
T cd05040 114 ESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRALPQNEDHYVME---EHLKVPFAWCAPESLRTRTFSHASDVWMFGV 188 (257)
T ss_pred HhCCccccccCcccEEEec--CCEEEeccccccccccccccceecc---cCCCCCceecCHHHhcccCcCchhhhHHHHH
Confidence 9999999999999999986 7999999999998875532211000 0122345678888877667777889999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 189 ~l~el~ 194 (257)
T cd05040 189 TLWEMF 194 (257)
T ss_pred HHHHHH
Confidence 766554
No 135
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.43 E-value=2e-13 Score=146.62 Aligned_cols=192 Identities=18% Similarity=0.197 Sum_probs=115.5
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.+|||.|++|.|+.|.. +|+.||||-. .+.++. .-..+...+|+
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi------------------~~~F~~----------------~~~akRtlREl 72 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKI------------------LNPFEN----------------QIDAKRTLREL 72 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhh------------------hhhhhc----------------hHHHHHHHHHH
Confidence 48999999999999999 6999999944 111110 00123334454
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH--HHHHHHHHHHHHHHhC
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR--LGRYAVESYLEQILSH 453 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~--la~~lv~~~l~qI~~~ 453 (766)
-+.+..+ .+|+.....|..|....+ -...++|+|++ +..|..+....+. +.... ..-.-+-..++.+|..
T Consensus 73 klLr~~~-----HeNIi~l~di~~p~~~~~-f~DvYiV~elM-etDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiHSA 144 (359)
T KOG0660|consen 73 KLLRHLR-----HENIIGLLDIFRPPSRDK-FNDVYLVFELM-ETDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIHSA 144 (359)
T ss_pred HHHHHhc-----CCCcceEEeecccccccc-cceeEEehhHH-hhHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhhcc
Confidence 4433322 112222223444422222 24579999999 4566665432220 22222 2222222336778899
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~-l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
|++|||+||+|++++. +..++++|||+++.+++..... +.+.+..-.-+. .+.+..+.-.+...|++++.-.+
T Consensus 145 nViHRDLKPsNll~n~--~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRA----PElll~~~~Yt~aiDiWSvGCI~ 218 (359)
T KOG0660|consen 145 NVIHRDLKPSNLLLNA--DCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRA----PELLLNSSEYTKAIDIWSVGCIL 218 (359)
T ss_pred cccccccchhheeecc--CCCEEeccccceeeccccCcccchhcceeeeeecC----HHHHhccccccchhhhhhhhHHH
Confidence 9999999999999986 8899999999999997531111 122222212233 34445556667888999999888
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 219 AEmL~ 223 (359)
T KOG0660|consen 219 AEMLT 223 (359)
T ss_pred HHHHc
Confidence 77764
No 136
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.43 E-value=9.7e-13 Score=138.53 Aligned_cols=184 Identities=15% Similarity=0.141 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||.|++|+||+|++ .+..|++|..++.....
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------------- 49 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQ----------------------------------------- 49 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHH-----------------------------------------
Confidence 6799999999999985 35789999774321100
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc----------------CCC
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL----------------GVD 434 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~----------------g~d 434 (766)
..-+|.+|+..+.++. +++ +++++. ......+++|||++|++|.++...... .++
T Consensus 50 ~~~~~~~E~~~l~~l~-----h~n--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 50 QWGEFQQEASLMAELH-----HPN--IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred HHHHHHHHHHHHhhCC-----CCC--eeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 0113445555444442 233 233332 234567999999999999886532211 122
Q ss_pred HHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHH
Q 004234 435 RKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQA 512 (766)
Q Consensus 435 ~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~ 512 (766)
...+...+.+ ..+..+|..|++|+|++|.||++++ ++.+++.|||++..+........ ......+..+++++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE 196 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE--QLHVKISDLGLSREIYSADYYRV----QPKSLLPIRWMPPE 196 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC--CCcEEeccccccccccCCcceec----ccCCCccceecChH
Confidence 3333222222 3478899999999999999999986 78899999999987644321110 01112244577888
Q ss_pred HHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 513 MVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 513 l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
...-+..++..|++++...+.+++
T Consensus 197 ~~~~~~~~~~~Dv~slG~il~el~ 220 (283)
T cd05090 197 AIMYGKFSSDSDIWSFGVVLWEIF 220 (283)
T ss_pred HhccCCCCchhhhHHHHHHHHHHH
Confidence 777677788899999988776655
No 137
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.43 E-value=9.3e-13 Score=159.21 Aligned_cols=192 Identities=18% Similarity=0.132 Sum_probs=123.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+...... ... .-+
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~---------------------------------e~~------~~r 48 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN---------------------------------PLL------KKR 48 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccC---------------------------------HHH------HHH
Confidence 6799999999999998 58999999885432211 000 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh--h--------cCCCHHHHHHHH--H
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--E--------LGVDRKRLGRYA--V 443 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~--~--------~g~d~~~la~~l--v 443 (766)
|.+|++.+.++. ++++ .+..++ ......+++|||++|++|.++.... . ...+...+...+ +
T Consensus 49 flrEi~ILs~L~-----HPNIVkl~~v~-~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QI 122 (932)
T PRK13184 49 FLREAKIAADLI-----HPGIVPVYSIC-SDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI 122 (932)
T ss_pred HHHHHHHHHhCC-----CcCcCeEEEEE-eeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHH
Confidence 455655554442 2332 222222 2345679999999999998865321 0 111122222222 2
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH-----------HHH-HHHHhhcCHHHHHH
Q 004234 444 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL-----------LEA-FYGIYEKDADKVLQ 511 (766)
Q Consensus 444 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l-----------~~l-~~a~~~~D~~~v~~ 511 (766)
...+..+|..|++|+|+||+||+++. +|.++++|||++..+........ ... ..+-..+++.+++|
T Consensus 123 a~AL~yLHs~GIIHRDLKPeNILLd~--dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 123 CATIEYVHSKGVLHRDLKPDNILLGL--FGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHCCccccCCchheEEEcC--CCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 23477889999999999999999986 88999999999987732111000 000 00112367888999
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 512 AMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 512 ~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
+...-+..+...|++++...+.+++.
T Consensus 201 E~l~g~~~S~kSDIWSLGVILyELLT 226 (932)
T PRK13184 201 ERLLGVPASESTDIYALGVILYQMLT 226 (932)
T ss_pred HHhcCCCCCcHhHHHHHHHHHHHHHH
Confidence 98877777778899999988877664
No 138
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.43 E-value=1.2e-12 Score=137.43 Aligned_cols=185 Identities=15% Similarity=0.084 Sum_probs=118.0
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||.|++|.||+|++ +|+ +||||+.+......
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~----------------------------------------- 51 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK----------------------------------------- 51 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHH-----------------------------------------
Confidence 6899999999999997 455 58999874322111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
.+-++.+|...+..+ +++++....-+ ......+++|||++++++.+........+....+...+.+ ..+..+
T Consensus 52 ~~~~~~~e~~~l~~~-----~~~~i~~~~~~-~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~l 125 (279)
T cd05109 52 ANKEILDEAYVMAGV-----GSPYVCRLLGI-CLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYL 125 (279)
T ss_pred HHHHHHHHHHHHHhc-----CCCCCceEEEE-EcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 011234444444333 22333222212 2245578999999999998865432223444444443333 347788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|+||+||++.+ ++.++|+|||++..++........ .-......++.++....+..+...|++++.-
T Consensus 126 H~~~iiH~dlkp~Nil~~~--~~~~kL~dfG~~~~~~~~~~~~~~----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~ 199 (279)
T cd05109 126 EEVRLVHRDLAARNVLVKS--PNHVKITDFGLARLLDIDETEYHA----DGGKVPIKWMALESILHRRFTHQSDVWSYGV 199 (279)
T ss_pred HHCCeeccccccceEEEcC--CCcEEECCCCceeecccccceeec----CCCccchhhCCHHHhccCCCCchhHHHHHHH
Confidence 9999999999999999975 789999999999877543221000 0011234577777776666677789999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 200 ~l~el~ 205 (279)
T cd05109 200 TVWELM 205 (279)
T ss_pred HHHHHH
Confidence 766554
No 139
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.43 E-value=2.1e-12 Score=133.45 Aligned_cols=183 Identities=14% Similarity=0.085 Sum_probs=119.8
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||+|++|+||+|.+ +++.+|||+.+.+... +-+|
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~-------------------------------------------~~~~ 46 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS-------------------------------------------EEDF 46 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCC-------------------------------------------HHHH
Confidence 6799999999999998 5889999987433210 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
..|.+.+.++. ++++.-..-+....+..+++|||++|+.|.++............+.....+ ..+..+|..|+
T Consensus 47 ~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i 121 (256)
T cd05112 47 IEEAQVMMKLS-----HPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV 121 (256)
T ss_pred HHHHHHHHhCC-----CCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 45555555542 232221111223346789999999999998865432222344443333322 33677899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|+||+++. ++.++++|||++..+....... .........++++++...+..+...|++++...+.++
T Consensus 122 ~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el 194 (256)
T cd05112 122 IHRDLAARNCLVGE--NQVVKVSDFGMTRFVLDDQYTS-----STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEV 194 (256)
T ss_pred cccccccceEEEcC--CCeEEECCCcceeecccCcccc-----cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHH
Confidence 99999999999985 7899999999988764331100 0001123456778877767777778999988766654
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 195 ~ 195 (256)
T cd05112 195 F 195 (256)
T ss_pred H
Confidence 4
No 140
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.43 E-value=1.7e-12 Score=134.51 Aligned_cols=183 Identities=14% Similarity=0.102 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|.||+|++ ++..||+|..+.+-. .+-+|
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-------------------------------------------~~~~~ 46 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-------------------------------------------SEEDF 46 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCc-------------------------------------------cHHHH
Confidence 5699999999999999 577899997632210 01244
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
.+|+.-+.++. ++++.-..-+.......+++|||++|++|.+.........+...+...+.+ ..+..+|..|+
T Consensus 47 ~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 121 (256)
T cd05114 47 IEEAKVMMKLS-----HPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF 121 (256)
T ss_pred HHHHHHHHHCC-----CCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 55555555442 233322222233455679999999999998865432223444443333322 34678899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|+||+++. ++.+++.|||.+..+.......- ........+++++.......+...|++++...+.++
T Consensus 122 ~H~dl~p~ni~i~~--~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el 194 (256)
T cd05114 122 IHRDLAARNCLVSS--TGVVKVSDFGMTRYVLDDEYTSS-----SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEV 194 (256)
T ss_pred cccccCcceEEEcC--CCeEEECCCCCccccCCCceecc-----CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHH
Confidence 99999999999985 78999999999887643221100 001123457777777665566778999988776655
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 195 ~ 195 (256)
T cd05114 195 F 195 (256)
T ss_pred H
Confidence 4
No 141
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.42 E-value=8.4e-13 Score=141.32 Aligned_cols=183 Identities=13% Similarity=0.075 Sum_probs=113.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +++.||||+.+...... .+..
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------------~~~~ 50 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-----------------------------------------APCT 50 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-----------------------------------------cchh
Confidence 6799999999999998 58899999874322111 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
+.+|...+.++. + +++ .+-..+ ......++||||+++ .+.+.........+...+.... +-..+..+|..
T Consensus 51 ~~~E~~~l~~l~----h-~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (309)
T cd07872 51 AIREVSLLKDLK----H-ANIVTLHDIV-HTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123 (309)
T ss_pred HHHHHHHHHhCC----C-CCcceEEEEE-eeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 233444444432 2 332 222222 334568999999997 5555432222223333333222 22347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|+||+||+++. ++.++|+|||++.......... ........+++++.... +..+...|++++...+
T Consensus 124 ~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 195 (309)
T cd07872 124 KVLHRDLKPQNLLINE--RGELKLADFGLARAKSVPTKTY------SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIF 195 (309)
T ss_pred CeecCCCCHHHEEECC--CCCEEECccccceecCCCcccc------ccccccccccCCHHHhCCCCCCcHHHHHHHHHHH
Confidence 9999999999999986 8899999999987654322110 00122455667776543 3345667999988777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 196 ~el~t 200 (309)
T cd07872 196 FEMAS 200 (309)
T ss_pred HHHHh
Confidence 66553
No 142
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.42 E-value=2.3e-12 Score=134.53 Aligned_cols=201 Identities=16% Similarity=0.069 Sum_probs=121.4
Q ss_pred hhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004234 293 FERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (766)
Q Consensus 293 F~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 370 (766)
|.++..+++|+|++|+||+|.. +|+.||||..+........ ......+..+
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~--------------------------~~~~~~~~~~- 53 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGR--------------------------HDSRQKDMVK- 53 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcc--------------------------cchHHHHHHH-
Confidence 4556678999999999999987 6999999976432111100 0000011111
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHH
Q 004234 371 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLE 448 (766)
Q Consensus 371 l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~--lv~~~l~ 448 (766)
.+..|+..+..+ . ++++.-..-+.+.....++||||++|++|.+..... ..++...+... -+-..+.
T Consensus 54 -----~~~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~ 122 (272)
T cd06629 54 -----ALRSEIETLKDL----D-HLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLA 122 (272)
T ss_pred -----HHHHHHHHHHhc----C-CCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHH
Confidence 233444444433 1 233221112223346679999999999998865322 22333332222 1223467
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCCHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTT 526 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~--~~~~~D~~ 526 (766)
.+|..|++|+|++|+||+++. ++.++++|||+........... ......+...+++++...... .+...|++
T Consensus 123 ~lH~~~i~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~ 196 (272)
T cd06629 123 YLHSKGILHRDLKADNLLVDA--DGICKISDFGISKKSDDIYDND----QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIW 196 (272)
T ss_pred HHhhCCeeecCCChhhEEEcC--CCeEEEeecccccccccccccc----ccccccCCccccCHHHhccccCCCCccchhH
Confidence 889999999999999999985 8899999999987654321110 011123455666777765443 56678999
Q ss_pred HHHHHHHHHHH
Q 004234 527 AVRRTAQFFLN 537 (766)
Q Consensus 527 ~l~~~i~~~l~ 537 (766)
++...+.+++.
T Consensus 197 slG~~l~~l~~ 207 (272)
T cd06629 197 SLGCVVLEMFA 207 (272)
T ss_pred HHHHHHHHHHh
Confidence 99877665543
No 143
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=2e-13 Score=162.44 Aligned_cols=120 Identities=20% Similarity=0.257 Sum_probs=89.5
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcC-CCH--HHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 408 TPQILTMEYVPGIKINRIQSLDELG-VDR--KRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~g-~d~--~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
...||||||++|+.|-.+.. ..+ ++. .+.-..-+-..+..+|..|++|||+||.|||++. .|+|+|.|||.+-
T Consensus 148 ~~LYlVMdY~pGGDlltLlS--k~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLS--KFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHHh--hcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccchhHH
Confidence 34689999999999887643 222 222 2222222334578899999999999999999986 8999999999998
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCCHHHHHHHHHHHH
Q 004234 485 SISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 485 ~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~~~~~~D~~~l~~~i~~~l 536 (766)
.++.+-.- -..+.-|+|+|+.|++++. |...+..|-+++...+++++
T Consensus 224 km~~dG~V-----~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMl 275 (1317)
T KOG0612|consen 224 KMDADGTV-----RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEML 275 (1317)
T ss_pred hcCCCCcE-----EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHH
Confidence 88743211 1233458999999998873 56678889999999888877
No 144
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.42 E-value=2.1e-12 Score=135.82 Aligned_cols=189 Identities=17% Similarity=0.205 Sum_probs=122.7
Q ss_pred hhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHH
Q 004234 289 LDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDE 366 (766)
Q Consensus 289 ~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E 366 (766)
++++|.... .||+|++|.||+|.. +|+.||||+.......
T Consensus 2 ~~~~~~~~~--~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~------------------------------------ 43 (277)
T cd06641 2 PEELFTKLE--KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE------------------------------------ 43 (277)
T ss_pred HHHhhhhhe--eEeecCCeEEEEEEECCCCcEEEEEEeccccch------------------------------------
Confidence 345555443 699999999999987 5899999976211000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH-
Q 004234 367 CASVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE- 444 (766)
Q Consensus 367 ~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~- 444 (766)
...-++.+|...+.++. ++++ .+...+ ......++||||++|+++.++.. ....+...+...+.+
T Consensus 44 -----~~~~~~~~e~~~l~~l~-----h~~iv~~~~~~-~~~~~~~lv~e~~~~~~l~~~i~--~~~~~~~~~~~~~~~l 110 (277)
T cd06641 44 -----DEIEDIQQEITVLSQCD-----SPYVTKYYGSY-LKDTKLWIIMEYLGGGSALDLLE--PGPLDETQIATILREI 110 (277)
T ss_pred -----HHHHHHHHHHHHHHhcC-----CCCEeEEEEEE-EeCCeEEEEEEeCCCCcHHHHHh--cCCCCHHHHHHHHHHH
Confidence 00123455555554432 2332 222222 33466899999999999988643 223455544443333
Q ss_pred -HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004234 445 -SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 523 (766)
Q Consensus 445 -~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~ 523 (766)
..+..+|..|++|+|++|+||+++. ++.++++|||++..+....... ....++..++.++....+...+..
T Consensus 111 ~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~ 182 (277)
T cd06641 111 LKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAGQLTDTQIKR------NTFVGTPFWMAPEVIKQSAYDSKA 182 (277)
T ss_pred HHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccceecccchhhh------ccccCCccccChhhhccCCCCchh
Confidence 2367789999999999999999985 7899999999988776532111 112234556777777666667778
Q ss_pred CHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFL 536 (766)
Q Consensus 524 D~~~l~~~i~~~l 536 (766)
|++++...+.+++
T Consensus 183 Dv~slG~~l~~l~ 195 (277)
T cd06641 183 DIWSLGITAIELA 195 (277)
T ss_pred hHHHHHHHHHHHH
Confidence 9999887665543
No 145
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.42 E-value=1.1e-12 Score=140.85 Aligned_cols=185 Identities=17% Similarity=0.265 Sum_probs=114.6
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
-+|.|++|.||+|+. +|+.||+|.++-.-.+. -.| .+..+|+.+
T Consensus 18 klGeGtyg~Vykar~~~~g~~VALKkirl~~~~E-----------------G~P-----------------~taiREisl 63 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEE-----------------GVP-----------------STAIREISL 63 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEEEEEEecccccc-----------------CCC-----------------chhhHHHHH
Confidence 499999999999998 69999999985432211 011 123345444
Q ss_pred HHHHHHHHHHHHhcCCCC-ccccceeeeccC-----CCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHHHH--HH
Q 004234 378 TQEAANAELFASNFKDMD-YVKVPTIFWEYT-----TPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAVE--SY 446 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~-~V~vP~v~~e~s-----t~~vLVMEyieG~~L~d~~~l~~---~g~d~~~la~~lv~--~~ 446 (766)
.++.+ +.. -|..-.++...+ +..+||+||++- +|.++..... .+.+...+-..+.+ ..
T Consensus 64 lk~L~----------~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~g 132 (323)
T KOG0594|consen 64 LKRLS----------HANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRG 132 (323)
T ss_pred HHHhC----------CCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHH
Confidence 44433 222 234444444333 256899999984 4555433222 35555322222222 22
Q ss_pred HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHH
Q 004234 447 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 526 (766)
Q Consensus 447 l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~ 526 (766)
+..+|.+|++|||+||.||+|++ +|.++|+|||+++.++-..+. +..-+..+..+-++- ++..-..++..|++
T Consensus 133 l~~~H~~~IlHRDLKPQNlLi~~--~G~lKlaDFGlAra~~ip~~~-yt~evvTlWYRaPEv----LlGs~~Ys~~vDiW 205 (323)
T KOG0594|consen 133 LAFLHSHGILHRDLKPQNLLISS--SGVLKLADFGLARAFSIPMRT-YTPEVVTLWYRAPEV----LLGSTSYSTSVDIW 205 (323)
T ss_pred HHHHHhCCeecccCCcceEEECC--CCcEeeeccchHHHhcCCccc-ccccEEEeeccCHHH----hcCCCcCCCCcchH
Confidence 66788999999999999999996 999999999999977744443 222223333333333 33333467788999
Q ss_pred HHHHHHHHHH
Q 004234 527 AVRRTAQFFL 536 (766)
Q Consensus 527 ~l~~~i~~~l 536 (766)
++.-.+.+++
T Consensus 206 s~GcIfaEm~ 215 (323)
T KOG0594|consen 206 SLGCIFAEMF 215 (323)
T ss_pred hHHHHHHHHH
Confidence 9987766554
No 146
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.42 E-value=1.9e-12 Score=132.94 Aligned_cols=183 Identities=17% Similarity=0.187 Sum_probs=120.3
Q ss_pred ccccccceeEEEEEeec--C----eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK--G----EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--G----~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.+|.|++|+||+|+.. + ..||+|+.++.....
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 43 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ----------------------------------------- 43 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH-----------------------------------------
Confidence 57999999999999993 3 889999986542211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcC-CCHHHHHHHHHH--HHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRYAVE--SYL 447 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g-~d~~~la~~lv~--~~l 447 (766)
..-++..|.+.+..+ +++++ ++.+. ...+..+++|||++|.+|.++....... .+...+...+.+ ..+
T Consensus 44 ~~~~~~~e~~~l~~l-----~~~~i--~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l 116 (258)
T smart00219 44 QIEEFLREARIMRKL-----DHPNI--VKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGM 116 (258)
T ss_pred HHHHHHHHHHHHHhc-----CCCch--heEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHH
Confidence 011333444444333 22322 23332 2335789999999999999875432222 455444443332 236
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHH
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 527 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~ 527 (766)
..+|..|++|+|++|+||+++. ++.++++|||++........ +.. ........+++++....+..+...|+++
T Consensus 117 ~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~--~~~---~~~~~~~~y~~Pe~~~~~~~~~~~Di~s 189 (258)
T smart00219 117 EYLESKNFIHRDLAARNCLVGE--NLVVKISDFGLSRDLYDDDY--YKK---KGGKLPIRWMAPESLKDGKFTSKSDVWS 189 (258)
T ss_pred HHHhcCCeeecccccceEEEcc--CCeEEEcccCCceecccccc--ccc---ccCCCcccccChHHhccCCCCcchhHHH
Confidence 7889999999999999999986 78999999999987765411 000 0011335567777777777788899999
Q ss_pred HHHHHHHHH
Q 004234 528 VRRTAQFFL 536 (766)
Q Consensus 528 l~~~i~~~l 536 (766)
+...+.+++
T Consensus 190 lG~i~~~l~ 198 (258)
T smart00219 190 FGVLLWEIF 198 (258)
T ss_pred HHHHHHHHH
Confidence 987665554
No 147
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.42 E-value=3.2e-12 Score=131.02 Aligned_cols=184 Identities=15% Similarity=0.124 Sum_probs=122.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|.||+|+. +|+.|+||........ +.... +
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~------~ 45 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK----------------------------------EEALK------S 45 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccC----------------------------------HHHHH------H
Confidence 6899999999999998 5899999987433110 00001 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|++.+.++. ++++.-+.-+.......+++|||++|.+|.++.... ...+...+...+.+ ..+..+|..|
T Consensus 46 ~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 46 IMQEIDLLKNLK-----HPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred HHHHHHHHHhCC-----CCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 334444444432 233222222223346679999999999998865322 23444443333322 2367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|+||+++. ++.++++|||++..+...... .....++..+++++...........|++++...+.+
T Consensus 120 i~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~ 191 (254)
T cd06627 120 VIHRDIKAANILTTK--DGVVKLADFGVATKLNDVSKD------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIE 191 (254)
T ss_pred cccCCCCHHHEEECC--CCCEEEeccccceecCCCccc------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHH
Confidence 999999999999986 789999999999988765432 122245667788888776666677899998877665
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 192 l~ 193 (254)
T cd06627 192 LL 193 (254)
T ss_pred HH
Confidence 54
No 148
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.42 E-value=1.6e-12 Score=134.51 Aligned_cols=190 Identities=15% Similarity=0.065 Sum_probs=122.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|++|++|+.+...... .. ..+-.+
T Consensus 8 ~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~------------------------------~~-------~~~~~~ 50 (263)
T cd06625 8 KLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSP------------------------------ET-------KKEVNA 50 (263)
T ss_pred ceecCCCceEEEEEEEcCCCcEEEEEEEeecccch------------------------------hh-------HHHHHH
Confidence 6899999999999998 58999999874332111 00 000113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~---la~~lv~~~l~qI~~~ 453 (766)
+.+|+..+.++ +++++....-+.+.....+++|||++|++|.+..... ...+... ++..++ ..+..+|..
T Consensus 51 ~~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~-~~l~~lH~~ 123 (263)
T cd06625 51 LECEIQLLKNL-----QHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQIL-EGVEYLHSN 123 (263)
T ss_pred HHHHHHHHHhC-----CCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHH-HHHHHHHhC
Confidence 45555555444 2344433333334456789999999999998864321 1223222 222222 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||+||+++. +++++|+|||++..+........ ......+...++++++..........|++++...+.
T Consensus 124 ~i~H~dl~p~nilv~~--~~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (263)
T cd06625 124 MIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICSSGT---GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVV 198 (263)
T ss_pred CeecCCCCHHHEEEcC--CCCEEEeecccceeccccccccc---cccCCCcCccccCcceeccCCCCchhhhHHHHHHHH
Confidence 9999999999999985 88999999999987654321110 001122345677777776666677789999988776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 199 el~~ 202 (263)
T cd06625 199 EMLT 202 (263)
T ss_pred HHHh
Confidence 6553
No 149
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.42 E-value=1.7e-12 Score=138.59 Aligned_cols=182 Identities=18% Similarity=0.154 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||+|.....-... .-.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~------------------------------------------~~~ 62 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPK------------------------------------------KEL 62 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccch------------------------------------------HHH
Confidence 5799999999999997 69999999763211100 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+ +++++.-+.-+.......+++|||++|+++.++.. ....+...+...+.+ ..+..+|..|
T Consensus 63 ~~~e~~~l~~~-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~ 135 (297)
T cd06656 63 IINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALDFLHSNQ 135 (297)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333333322 22333222222334567899999999999998753 223344444443322 2367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||.+..+.+..... ....+++.++++++...+..++..|++++...+.+
T Consensus 136 i~H~dL~p~Nili~~--~~~~~l~Dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~ 207 (297)
T cd06656 136 VIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (297)
T ss_pred cccCCCCHHHEEECC--CCCEEECcCccceEccCCccCc------CcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHH
Confidence 999999999999985 8899999999998776543211 11234566778888777666778899999877766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 208 l~t 210 (297)
T cd06656 208 MVE 210 (297)
T ss_pred HHh
Confidence 553
No 150
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.42 E-value=9.8e-13 Score=144.53 Aligned_cols=188 Identities=16% Similarity=0.173 Sum_probs=116.9
Q ss_pred hhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004234 293 FERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (766)
Q Consensus 293 F~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 369 (766)
...|.. +.||+|++|.||+|.. .++.||||+........ +..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~- 67 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ----------------------------------THA- 67 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc----------------------------------hhH-
Confidence 344433 6899999999999998 58999999874321110 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH-
Q 004234 370 VLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV- 443 (766)
Q Consensus 370 ~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv- 443 (766)
-++.+|...+..+ .+..-+.+..++.. .....++||||++|. +.+... ...+...+...+.
T Consensus 68 -----~~~~~E~~~l~~l----~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~---~~~~~~~~~~~~~q 134 (364)
T cd07875 68 -----KRAYRELVLMKCV----NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQ---MELDHERMSYLLYQ 134 (364)
T ss_pred -----HHHHHHHHHHHhc----CCCCccccceeecccccccccCeEEEEEeCCCCC-HHHHHH---hcCCHHHHHHHHHH
Confidence 1122333333322 12111222222211 123469999999874 433321 1234333333322
Q ss_pred -HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004234 444 -ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 522 (766)
Q Consensus 444 -~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~ 522 (766)
-..+..+|..|++|+|+||.||+++. ++.++|+|||++......... ....+...++++++......++.
T Consensus 135 i~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~ 205 (364)
T cd07875 135 MLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKEN 205 (364)
T ss_pred HHHHHHHHhhCCeecCCCCHHHEEECC--CCcEEEEeCCCccccCCCCcc-------cCCcccCCcCCHHHHhCCCCCch
Confidence 23478889999999999999999986 889999999999876543210 11234567788888877667778
Q ss_pred CCHHHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFFLN 537 (766)
Q Consensus 523 ~D~~~l~~~i~~~l~ 537 (766)
.|++++...+.+++.
T Consensus 206 ~DiwSlG~il~ell~ 220 (364)
T cd07875 206 VDIWSVGCIMGEMIK 220 (364)
T ss_pred hhHHhHHHHHHHHHh
Confidence 999999988776653
No 151
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.42 E-value=3.3e-12 Score=124.66 Aligned_cols=182 Identities=18% Similarity=0.208 Sum_probs=120.0
Q ss_pred ccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||+|++|+||+++.. |++++||+.+++.... .+-.+.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-----------------------------------------~~~~~~ 39 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-----------------------------------------LLEELL 39 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-----------------------------------------HHHHHH
Confidence 689999999999994 9999999986543221 112344
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCcc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFF 456 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gff 456 (766)
+|.+.+.++.+ +++.-+.-+....+..+++|||++|.+|.++........+...+...+.. ..+..+|..|++
T Consensus 40 ~e~~~~~~l~~-----~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~ 114 (215)
T cd00180 40 REIEILKKLNH-----PNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGII 114 (215)
T ss_pred HHHHHHHhcCC-----CCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 55555554432 22333333333345789999999999999875433223454444443322 346889999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i~~~ 535 (766)
|+|++|+||++++ .+++++++|||.+........ ..........++.++....+ ..+...|.+++...+..+
T Consensus 115 H~dl~~~ni~~~~-~~~~~~l~d~~~~~~~~~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 115 HRDLKPENILLDS-DNGKVKLADFGLSKLLTSDKS------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred ccCCCHhhEEEeC-CCCcEEEecCCceEEccCCcc------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 9999999999984 258999999999998876542 01112345556666666655 556677888887655443
No 152
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.42 E-value=2.4e-12 Score=136.49 Aligned_cols=186 Identities=17% Similarity=0.117 Sum_probs=120.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.||||...+..... .+ .+-.
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~---------------------------------~~------~~~~ 46 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK---------------------------------RK------GESM 46 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc---------------------------------hH------HHHH
Confidence 5699999999999999 58999999774321110 00 0111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++. +...+.+...+ ......+++|||++|++|.+.... ...+++...+...+.+ ..+..+|..
T Consensus 47 ~~~E~~il~~l~----~~~i~~~~~~~-~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 121 (285)
T cd05630 47 ALNEKQILEKVN----SRFVVSLAYAY-ETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE 121 (285)
T ss_pred HHHHHHHHHhCC----CCCeeeeeEEE-ecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 234444444332 21112222222 234567999999999999886532 2223444444333332 336778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++++|||++.......... -..+...++++++...+..+...|++++...+.
T Consensus 122 ~iiH~dikp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~ 192 (285)
T cd05630 122 RIVYRDLKPENILLDD--HGHIRISDLGLAVHVPEGQTIK-------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 192 (285)
T ss_pred CEEeCCCCHHHEEECC--CCCEEEeeccceeecCCCcccc-------CCCCCccccChHHHcCCCCCCccccHHHHHHHH
Confidence 9999999999999986 7899999999987765432110 113466788888887777778889999987766
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 193 ~l~~ 196 (285)
T cd05630 193 EMIA 196 (285)
T ss_pred HHHh
Confidence 6543
No 153
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.42 E-value=7.3e-13 Score=142.87 Aligned_cols=188 Identities=18% Similarity=0.186 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+...... .....
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------~~~~~ 45 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV----------------------------------------SDATR 45 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccc----------------------------------------hhHHH
Confidence 5799999999999998 58999999874211100 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC----CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYT----TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s----t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI 450 (766)
+.+|++.+.++. +..-+.+..++.... ...++||||++| .|.++... ...++...+...+. -..+..+
T Consensus 46 ~~~E~~~l~~l~----hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~L 119 (338)
T cd07859 46 ILREIKLLRLLR----HPDIVEIKHIMLPPSRREFKDIYVVFELMES-DLHQVIKA-NDDLTPEHHQFFLYQLLRALKYI 119 (338)
T ss_pred HHHHHHHHHhCC----CCCEeeecceEeccCCCCCceEEEEEecCCC-CHHHHHHh-cccCCHHHHHHHHHHHHHHHHHH
Confidence 445665555442 222222333332111 236999999975 66664321 12244443333322 2347888
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCCHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDTTAV 528 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l--G~~~~~~D~~~l 528 (766)
|..|++|+|+||.||+++. ++.++|+|||++.......... ....-..++..++++++... +..++..|++++
T Consensus 120 H~~~ivH~dlkp~NIll~~--~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSl 194 (338)
T cd07859 120 HTANVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 194 (338)
T ss_pred HHCCeecCCCCHHHeEECC--CCcEEEccCccccccccccCcc---ccccCCCCCCCcCCHHHHhccccccCchhHHHHH
Confidence 9999999999999999986 8999999999998653321111 00111235666788887754 455677899999
Q ss_pred HHHHHHHHH
Q 004234 529 RRTAQFFLN 537 (766)
Q Consensus 529 ~~~i~~~l~ 537 (766)
...+.+++.
T Consensus 195 Gvvl~el~t 203 (338)
T cd07859 195 GCIFAEVLT 203 (338)
T ss_pred HHHHHHHHc
Confidence 987776653
No 154
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.41 E-value=2e-12 Score=141.26 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=61.2
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 525 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~ 525 (766)
.+..+|..|++|+|++|.||+++. ++.++++|||++..+...... .. .+.....+.+++++....+..+...|+
T Consensus 191 al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~--~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di 264 (343)
T cd05103 191 GMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDY--VR--KGDARLPLKWMAPETIFDRVYTIQSDV 264 (343)
T ss_pred HHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcch--hh--cCCCCCCcceECcHHhcCCCCCchhhH
Confidence 367789999999999999999985 789999999998876432110 00 111123345777887766667778899
Q ss_pred HHHHHHHHHHH
Q 004234 526 TAVRRTAQFFL 536 (766)
Q Consensus 526 ~~l~~~i~~~l 536 (766)
+++...+.+++
T Consensus 265 ~slG~~l~el~ 275 (343)
T cd05103 265 WSFGVLLWEIF 275 (343)
T ss_pred HHHHHHHHHHH
Confidence 99987766554
No 155
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.41 E-value=2.2e-12 Score=135.98 Aligned_cols=178 Identities=17% Similarity=0.143 Sum_probs=118.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|.||+|+. +|+.||||+...+.... .+-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-----------------------------------------~~~~ 45 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVE-----------------------------------------LQKQ 45 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChH-----------------------------------------HHHH
Confidence 5799999999999998 68999999874321100 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
+.+|.+.+.++ +++++.-+.-+.......+|+|||++|+++..... .+...+..... -..+..+|..|
T Consensus 46 ~~~E~~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 46 IMSELEILYKC-----DSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRK-----IPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred HHHHHHHHHhC-----CCCCeeeEEEEEEECCEEEEEEecCCCCChHHhhc-----CCHHHHHHHHHHHHHHHHHHHHCC
Confidence 44455544443 22333322222233456789999999998875422 22222222222 22367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||++..+...... ...+...+++++....+..+...|++++...+.+
T Consensus 116 i~H~dlkp~Nill~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~ 185 (279)
T cd06619 116 ILHRDVKPSNMLVNT--RGQVKLCDFGVSTQLVNSIAK--------TYVGTNAYMAPERISGEQYGIHSDVWSLGISFME 185 (279)
T ss_pred EeeCCCCHHHEEECC--CCCEEEeeCCcceeccccccc--------CCCCChhhcCceeecCCCCCCcchHHHHHHHHHH
Confidence 999999999999986 899999999999876543221 1235667788887776667778899999887766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 186 l~~ 188 (279)
T cd06619 186 LAL 188 (279)
T ss_pred HHh
Confidence 553
No 156
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.41 E-value=3.8e-12 Score=132.16 Aligned_cols=183 Identities=16% Similarity=0.163 Sum_probs=121.3
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|+||+|.. .+..||+|..+++... +-+|
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-------------------------------------------PESF 48 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCC-------------------------------------------HHHH
Confidence 5799999999999998 6788999988653211 0124
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
.+|+.-+.++ .+..-+.+...+ .....+++|||++|++|.++.... ....+...+...+.+ ..+..+|..|
T Consensus 49 ~~E~~~l~~l----~~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05070 49 LEEAQIMKKL----RHDKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 122 (260)
T ss_pred HHHHHHHHhc----CCCceEEEEeEE--CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4454444443 222223333332 245679999999999998865321 122344333333322 3367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||++++ ++.++|+|||.+..+........ .-......++++++...+..+...|++++...+.+
T Consensus 123 i~H~di~p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05070 123 YIHRDLRSANILVGD--GLVCKIADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred cccCCCccceEEEeC--CceEEeCCceeeeeccCcccccc-----cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHH
Confidence 999999999999986 78999999999987754321110 00112345778888777777788999999887776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 196 l~~ 198 (260)
T cd05070 196 LVT 198 (260)
T ss_pred HHh
Confidence 653
No 157
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.41 E-value=3.1e-12 Score=135.58 Aligned_cols=183 Identities=19% Similarity=0.135 Sum_probs=122.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||||+.++.-... ....-.
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------~~~~~~ 47 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK---------------------------------------LKQVEH 47 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh---------------------------------------hhHHHH
Confidence 5799999999999998 58999999874210000 001123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|++.+.++. +..-+.+...+ ......+++|||++|++|.+..... ..++...+...+.+ ..+..+|..|
T Consensus 48 ~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 48 VLNEKRILQSIR----HPFLVNLYGSF-QDDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred HHHHHHHHHhCC----CCCccceeeEE-EcCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 445555555442 22122333333 2345679999999999998865322 23444443333222 3467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++..+..... ...+.+.+++++...-+......|++++...+.+
T Consensus 122 i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 190 (290)
T cd05580 122 IVYRDLKPENLLLDS--DGYIKITDFGFAKRVKGRTY---------TLCGTPEYLAPEIILSKGYGKAVDWWALGILIYE 190 (290)
T ss_pred EecCCCCHHHEEECC--CCCEEEeeCCCccccCCCCC---------CCCCCccccChhhhcCCCCCccccHHHHHHHHHH
Confidence 999999999999986 88999999999988765411 1234566778887766666677899999877766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 191 l~~ 193 (290)
T cd05580 191 MLA 193 (290)
T ss_pred HHh
Confidence 553
No 158
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.41 E-value=1.7e-12 Score=137.02 Aligned_cols=189 Identities=19% Similarity=0.175 Sum_probs=121.4
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
..||.|++|.||.|.+ ++..||+|..++......
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~---------------------------------------- 49 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH---------------------------------------- 49 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHH----------------------------------------
Confidence 4699999999999974 378999998765432110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQ 449 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~q 449 (766)
.-++.+|...+..+ .+..-+.+...+... ....++||||++|++|.++........+...+...+. ...+..
T Consensus 50 -~~~~~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~ 124 (284)
T cd05079 50 -IADLKKEIEILRNL----YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDY 124 (284)
T ss_pred -HHHHHHHHHHHHhC----CCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 01234454444443 222222333333222 1346899999999999987543222344444333332 234788
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..|++|+|+||.||+++. ++.++|.|||++..+....... . ......+...+++++....+..++..|++++.
T Consensus 125 lH~~gi~H~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~--~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 199 (284)
T cd05079 125 LGSRQYVHRDLAARNVLVES--EHQVKIGDFGLTKAIETDKEYY--T-VKDDLDSPVFWYAPECLIQSKFYIASDVWSFG 199 (284)
T ss_pred HHHCCeeecccchheEEEcC--CCCEEECCCccccccccCccce--e-ecCCCCCCccccCHHHhccCCCCccccchhhh
Confidence 99999999999999999985 8899999999998775432110 0 01112234456777777666677889999999
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 200 ~il~ellt 207 (284)
T cd05079 200 VTLYELLT 207 (284)
T ss_pred hhhhhhhc
Confidence 87776653
No 159
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.41 E-value=3.1e-12 Score=135.28 Aligned_cols=183 Identities=17% Similarity=0.148 Sum_probs=115.4
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||+|++|.||+|.. +|+.||||+.++.....-. .+..+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~---------------------------------------~~~~~ 41 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---------------------------------------GETLA 41 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccch---------------------------------------HHHHH
Confidence 379999999999998 5899999988543211100 00011
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
..|.. +.++.... +++.+ +..+. ......+++|||++|++|.+.... ...++...+...+.+ ..+..+|..
T Consensus 42 ~~~~~-~~~~~~~~-~~~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~ 116 (279)
T cd05633 42 LNERI-MLSLVSTG-DCPFI--VCMTYAFHTPDKLCFILDLMNGGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNR 116 (279)
T ss_pred HHHHH-HHHHHhhC-CCCcE--eEEEEEEecCCeEEEEEecCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11211 11111111 22333 33332 234567999999999999876432 222444444333322 347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i 532 (766)
|++|+|++|+||+++. ++.++++|||++..++..... ...+...+++++....| ..+...|++++...+
T Consensus 117 ~ivH~dikp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 186 (279)
T cd05633 117 FVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKKPH--------ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCML 186 (279)
T ss_pred CcCCCCCCHHHEEECC--CCCEEEccCCcceeccccCcc--------CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHH
Confidence 9999999999999985 789999999998766543211 12356677888876543 346678999998776
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 187 ~~l~ 190 (279)
T cd05633 187 FKLL 190 (279)
T ss_pred HHHH
Confidence 6654
No 160
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.41 E-value=2.8e-12 Score=132.65 Aligned_cols=178 Identities=13% Similarity=0.123 Sum_probs=118.7
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+.+|+|++|.||+|...|+.||||..+.... ..-.+.
T Consensus 12 ~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-------------------------------------------~~~~~~ 48 (256)
T cd05039 12 ATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-------------------------------------------AAQAFL 48 (256)
T ss_pred eeeecCCCceEEEEEecCcEEEEEEeccchh-------------------------------------------HHHHHH
Confidence 6799999999999999999999998732211 011233
Q ss_pred HHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhc-CCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 379 QEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL-GVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~-g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+|...+.++. ++++ .+...+ ...+..+++|||++|++|.++...... ..+...+...+.+ ..+..+|..|
T Consensus 49 ~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~ 122 (256)
T cd05039 49 AEASVMTTLR-----HPNLVQLLGVV-LQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN 122 (256)
T ss_pred HHHHHHHhcC-----CcceeeeEEEE-cCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3444344331 2222 222222 236778999999999999987543221 2344433333322 3367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|+||+++. ++.++++|||.+......... ......+++++....+...+..|++++...+.+
T Consensus 123 i~H~di~p~Nili~~--~~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~ 191 (256)
T cd05039 123 FVHRDLAARNVLVSE--DLVAKVSDFGLAKEASQGQDS---------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred ccchhcccceEEEeC--CCCEEEccccccccccccccc---------CCCcccccCchhhcCCcCCcHHHHHHHHHHHHH
Confidence 999999999999986 889999999999887443221 122345667777777777778899998876655
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 192 l~ 193 (256)
T cd05039 192 IY 193 (256)
T ss_pred HH
Confidence 44
No 161
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.41 E-value=2.5e-12 Score=133.78 Aligned_cols=193 Identities=13% Similarity=0.051 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|+||+|.. +|+.||||..+...... .. ..+. .-.+
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~-----------------------------~~-~~~~------~~~~ 49 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV-----------------------------LA-AEKE------YEKL 49 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccch-----------------------------hh-HHHH------HHHH
Confidence 5799999999999988 79999999874322111 00 0001 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~Gf 455 (766)
.+|+..+.++. ++++.-..-+.......+++|||++|++|.++.... ...+...+...+. -..+..+|..|+
T Consensus 50 ~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (265)
T cd06631 50 QEEVDLLKSLK-----HVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCV 123 (265)
T ss_pred HHHHHHHHhcC-----CCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 44554444442 222221111222345679999999999999875321 2233333332222 234677899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHH-HHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIRE-GLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~-~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
+|+|++|.||+++. ++.++++|||++..+...... ...... ....+...+++++...-....+..|++++...+.+
T Consensus 124 ~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~ 200 (265)
T cd06631 124 VHRDIKGNNVMLMP--NGIIKLIDFGCARRLAWVGLHGTHSNML-KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFE 200 (265)
T ss_pred ccCCcCHHhEEECC--CCeEEeccchhhHhhhhccccccccccc-cccCCCccccChhhhcCCCCcchhhHHHHHHHHHH
Confidence 99999999999985 889999999998765321100 000000 11234556777777766666778899998876665
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 201 l~ 202 (265)
T cd06631 201 MA 202 (265)
T ss_pred HH
Confidence 54
No 162
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.41 E-value=2.1e-12 Score=133.95 Aligned_cols=183 Identities=16% Similarity=0.143 Sum_probs=121.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|.||+|.. +++.||+|...+.-.. .-++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~-------------------------------------------~~~~ 48 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-------------------------------------------VQAF 48 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchh-------------------------------------------HHHH
Confidence 6799999999999998 6788999986442110 0023
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
.+|...+..+ +++++.-...+.......+++|||++|++|.++.... ....+...+...+. ...+..+|..|
T Consensus 49 ~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~ 123 (261)
T cd05072 49 LEEANLMKTL-----QHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN 123 (261)
T ss_pred HHHHHHHHhC-----CCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4454444443 2233322222233345679999999999998865322 22234334333322 23467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.+++.|||.+..+....... .........+++++....+..++..|++++...+.+
T Consensus 124 i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 196 (261)
T cd05072 124 YIHRDLRAANVLVSE--SLMCKIADFGLARVIEDNEYTA-----REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYE 196 (261)
T ss_pred eeccccchhhEEecC--CCcEEECCCccceecCCCceec-----cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHH
Confidence 999999999999986 8899999999998875432110 001122345778888877777788899999887766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 197 l~ 198 (261)
T cd05072 197 IV 198 (261)
T ss_pred HH
Confidence 65
No 163
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.41 E-value=3.1e-12 Score=131.68 Aligned_cols=180 Identities=19% Similarity=0.203 Sum_probs=121.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+++|++|.||+|.. +|+.|++|..+.... .-+
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------------------------------------~~~ 44 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--------------------------------------------LQE 44 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--------------------------------------------HHH
Confidence 5799999999999999 389999998632100 013
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|.+.+.++ +++++ .+...+ ......+++|||++|.+|.++.......++...+...+.+ ..+..+|..
T Consensus 45 ~~~e~~~~~~l-----~~~~i~~~~~~~-~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 45 IIKEISILKQC-----DSPYIVKYYGSY-FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred HHHHHHHHHhC-----CCCcEeeeeeee-ecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 44444444444 22222 222222 2235678999999999999976543444455444443333 336778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|+||+++. ++.++|.|||++..+....... ....+...++.++.......+...|++++...+.
T Consensus 119 ~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~ 190 (256)
T cd06612 119 KKIHRDIKAGNILLNE--EGQAKLADFGVSGQLTDTMAKR------NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAI 190 (256)
T ss_pred CcccCCCCcceEEECC--CCcEEEcccccchhcccCcccc------ccccCCccccCHHHHhcCCCCchhhHHHHHHHHH
Confidence 9999999999999986 8899999999998876543211 1122455677788777666677789999987766
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 191 ~l~ 193 (256)
T cd06612 191 EMA 193 (256)
T ss_pred HHH
Confidence 554
No 164
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=1e-12 Score=148.19 Aligned_cols=188 Identities=21% Similarity=0.332 Sum_probs=126.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||-|.||.|..++- +...+|+|.+|. .|+ + .+.--..+..|-|
T Consensus 635 k~iGvGAFGeV~Lv~KvDT~~lYAmKTLrK-------aDV---------l-----------------~rnQvaHVKAERD 681 (1034)
T KOG0608|consen 635 KTIGVGAFGEVCLVRKVDTRALYAMKTLRK-------ADV---------L-----------------MRNQVAHVKAERD 681 (1034)
T ss_pred eeecccccceeEEEeecchhhHHHHhhhHH-------HHH---------H-----------------hhhhhhhhhhhhh
Confidence 6899999999999886 344566664421 111 1 1112234556777
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH---HHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA---VESYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l---v~~~l~qI~ 451 (766)
.+.||.| ++ |.+.|..+. ...|.|||||+|+.+-.++ -+.|+-.+.+|+-- +.+.++.+|
T Consensus 682 ILAEADn-----------~W--VVrLyySFQDkdnLYFVMdYIPGGDmMSLL--IrmgIFeE~LARFYIAEltcAiesVH 746 (1034)
T KOG0608|consen 682 ILAEADN-----------EW--VVRLYYSFQDKDNLYFVMDYIPGGDMMSLL--IRMGIFEEDLARFYIAELTCAIESVH 746 (1034)
T ss_pred hHhhcCC-----------cc--eEEEEEEeccCCceEEEEeccCCccHHHHH--HHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 7777743 22 345554443 4569999999999888763 35566666666543 334578899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccC----------------------h------------hhH--HHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS----------------------P------------NIR--EGLL 495 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~----------------------~------------~~r--~~l~ 495 (766)
..||+|||+||.||||+. ||+|+|.|||++.-+. + +.| .+-.
T Consensus 747 kmGFIHRDiKPDNILIDr--dGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~ 824 (1034)
T KOG0608|consen 747 KMGFIHRDIKPDNILIDR--DGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQ 824 (1034)
T ss_pred hccceecccCccceEEcc--CCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhh
Confidence 999999999999999997 9999999999986321 0 001 1112
Q ss_pred HHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 496 EAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 496 ~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
..+...+-+++.+++++++.---.+..+|-+.+...+.+++
T Consensus 825 r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 825 RILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred hhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 23334455788889988887655567789998888776665
No 165
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.41 E-value=1.7e-12 Score=142.30 Aligned_cols=182 Identities=18% Similarity=0.170 Sum_probs=114.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+........ + ....
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~------~~~~ 66 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ----------------------------------T------HAKR 66 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccch----------------------------------h------HHHH
Confidence 7899999999999998 58999999874321110 0 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 449 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~q 449 (766)
+.+|...+..+ .+..-+.+..++.. .....+++|||++|.....+. ..++...+...+ +-..+..
T Consensus 67 ~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~ 138 (359)
T cd07876 67 AYRELVLLKCV----NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKH 138 (359)
T ss_pred HHHHHHHHHhC----CCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHH
Confidence 22333333332 22222223233221 112468999999985333221 123444443333 2234788
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..|++|+|+||.||+++. +|.++|+|||++......... .-..+...+++++........+..|++++.
T Consensus 139 LH~~~ivHrDlkp~NIl~~~--~~~~kl~Dfg~a~~~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG 209 (359)
T cd07876 139 LHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTACTNFMM-------TPYVVTRYYRAPEVILGMGYKENVDIWSVG 209 (359)
T ss_pred HHhCCcccCCCCHHHEEECC--CCCEEEecCCCccccccCccC-------CCCcccCCCCCchhccCCCCCcchhhHHHH
Confidence 99999999999999999986 899999999998765432110 111235567778877666677788999999
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 210 ~il~el~t 217 (359)
T cd07876 210 CIMGELVK 217 (359)
T ss_pred HHHHHHHh
Confidence 88777653
No 166
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.41 E-value=1.8e-12 Score=145.45 Aligned_cols=85 Identities=14% Similarity=0.066 Sum_probs=62.2
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 525 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~ 525 (766)
.+..+|..|++|+|++|.||+++. ++.++++|||++..+.......- .........+++++....+..++..|+
T Consensus 249 aL~~LH~~~ivH~dikp~Nill~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di 322 (400)
T cd05105 249 GMEFLASKNCVHRDLAARNVLLAQ--GKIVKICDFGLARDIMHDSNYVS----KGSTFLPVKWMAPESIFDNLYTTLSDV 322 (400)
T ss_pred HHHHHHhCCeeCCCCChHhEEEeC--CCEEEEEeCCcceeccccccccc----cCCcCCCcceEChhhhcCCCCCchhhH
Confidence 467889999999999999999986 78899999999987643321100 000112345777887777777888999
Q ss_pred HHHHHHHHHHH
Q 004234 526 TAVRRTAQFFL 536 (766)
Q Consensus 526 ~~l~~~i~~~l 536 (766)
+++...+.+++
T Consensus 323 wSlGvil~ell 333 (400)
T cd05105 323 WSYGILLWEIF 333 (400)
T ss_pred HHHHHHHHHHH
Confidence 99988776654
No 167
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.41 E-value=5.1e-12 Score=130.92 Aligned_cols=181 Identities=17% Similarity=0.144 Sum_probs=118.9
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||+|++|.||+|.+ +++.||||+.+++.... -++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~-------------------------------------------~~~ 48 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSP-------------------------------------------EAF 48 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCH-------------------------------------------HHH
Confidence 6899999999999998 57889999875432110 123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHh
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
..|...+.++. +++ +++.+. ......+++|||++|++|.++..... ..++...+...+.+ ..+..+|.
T Consensus 49 ~~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~ 121 (261)
T cd05034 49 LQEAQIMKKLR-----HDK--LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES 121 (261)
T ss_pred HHHHHHHhhCC-----CCC--EeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 34444444432 222 333332 23356799999999999988653221 22344433333222 23678899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||++++ ++.++++|||.+..+......... -......+++++...-+..++..|++++...+
T Consensus 122 ~~i~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~~~-----~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il 194 (261)
T cd05034 122 RNYIHRDLAARNILVGE--NLVCKIADFGLARLIEDDEYTARE-----GAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194 (261)
T ss_pred CCcccCCcchheEEEcC--CCCEEECccccceeccchhhhhhh-----ccCCCccccCHHHhccCCcCchhHHHHHHHHH
Confidence 99999999999999986 899999999999887642211100 01123456777777766677788999998776
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 195 ~~l~ 198 (261)
T cd05034 195 TEIV 198 (261)
T ss_pred HHHH
Confidence 6654
No 168
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.40 E-value=2.7e-12 Score=133.38 Aligned_cols=197 Identities=16% Similarity=0.113 Sum_probs=120.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|+||+|.. +++.||+|+........- ...-..++.+ +
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~---------------------------~~~~~~~~~~------~ 52 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSAS---------------------------SKDRKRSMLD------A 52 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccc---------------------------hhHHHHHHHH------H
Confidence 5799999999999998 589999998743321110 0000111112 3
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
+.+|+..+.++. + +++ .+... .......+++|||++|.+|.++.... ..++...+...+ +...+..+|..
T Consensus 53 ~~~e~~~l~~l~----h-~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~ 125 (267)
T cd06628 53 LAREIALLKELQ----H-ENIVQYLGS-SLDADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNR 125 (267)
T ss_pred HHHHHHHHHhcC----C-CCeeeEEEE-EEeCCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhc
Confidence 344444444432 2 322 22222 23345679999999999998865321 223333322222 22336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++|+|||++..+.................+...+++++....+..+...|++++...+.
T Consensus 126 ~ivH~di~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~ 203 (267)
T cd06628 126 GIIHRDIKGANILVDN--KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVV 203 (267)
T ss_pred CcccccCCHHHEEEcC--CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHH
Confidence 9999999999999985 88999999999987753211000000001122445677788777666677789999987776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 204 ~l~~ 207 (267)
T cd06628 204 EMLT 207 (267)
T ss_pred HHhh
Confidence 6553
No 169
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.40 E-value=2e-12 Score=133.36 Aligned_cols=117 Identities=16% Similarity=0.075 Sum_probs=83.1
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCC-------cEEEE
Q 004234 408 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGG-------RLIFY 478 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g-------~l~Li 478 (766)
...+++|||++|++|.++.......++...+...+ +-..+..+|..|++|+|++|.||+++. ++ .++++
T Consensus 73 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~--~~~~~~~~~~~kl~ 150 (259)
T cd05037 73 DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVAR--YGLNEGYVPFIKLS 150 (259)
T ss_pred CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEec--CccccCCceeEEeC
Confidence 56799999999999998764433344544443332 223467889999999999999999985 44 69999
Q ss_pred eecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCCHHHHHHHHHHHH
Q 004234 479 DFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 479 DFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG--~~~~~~D~~~l~~~i~~~l 536 (766)
|||++..+.... .......++++++...+ ..+...|++++...+.+++
T Consensus 151 Dfg~a~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~ 200 (259)
T cd05037 151 DPGIPITVLSRE----------ERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEIC 200 (259)
T ss_pred CCCccccccccc----------ccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHH
Confidence 999988765411 11234456777777655 5666789999887666554
No 170
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.40 E-value=1.8e-12 Score=136.48 Aligned_cols=186 Identities=18% Similarity=0.171 Sum_probs=115.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||+|+.+...... . . ..+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-----------------------~----~-------------~~~ 45 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-----------------------G----L-------------PLS 45 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-----------------------C----C-------------chH
Confidence 5699999999999998 58999999875432111 0 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec----cCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHH--HHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWE----YTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVE--SYLE 448 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~--~~l~ 448 (766)
+.+|..-+.++.. +. ++++ .+-.++.. .....+++|||++| .+.++... ...+++...+...+.+ ..+.
T Consensus 46 ~~~e~~~l~~l~~-~~-h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 122 (288)
T cd07863 46 TVREVALLKRLEA-FD-HPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122 (288)
T ss_pred HHHHHHHHHHhhh-cC-CCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 1222222222221 11 2222 12222211 12346899999997 55554322 2223454444443333 3477
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
.+|..|++|+|+||+||+++. ++.++|+|||++..++..... ....++..+++++....+..+...|++++
T Consensus 123 ~lH~~~ivH~dikp~Nili~~--~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~Diwsl 193 (288)
T cd07863 123 FLHANCIVHRDLKPENILVTS--GGQVKLADFGLARIYSCQMAL-------TPVVVTLWYRAPEVLLQSTYATPVDMWSV 193 (288)
T ss_pred HHHhCCeecCCCCHHHEEECC--CCCEEECccCccccccCcccC-------CCccccccccCchHhhCCCCCCcchhhhH
Confidence 889999999999999999985 889999999999876543211 01123556778888776677788999999
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+.+++
T Consensus 194 G~~l~~l~ 201 (288)
T cd07863 194 GCIFAEMF 201 (288)
T ss_pred HHHHHHHH
Confidence 98776654
No 171
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.40 E-value=2.8e-12 Score=134.58 Aligned_cols=186 Identities=16% Similarity=0.092 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..||.|++|+||+|.+. ++.||||+.+......
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~---------------------------------------- 51 (277)
T cd05062 12 RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMR---------------------------------------- 51 (277)
T ss_pred eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHH----------------------------------------
Confidence 57999999999999863 4679999763321100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------CCCHHHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGRYA 442 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~---------g~d~~~la~~l 442 (766)
...+|.+|+.-+..+ . ++++.-..-+....+..+++|||++|++|.++...... ..+...+...+
T Consensus 52 -~~~~~~~e~~~l~~l----~-~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (277)
T cd05062 52 -ERIEFLNEASVMKEF----N-CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMA 125 (277)
T ss_pred -HHHHHHHHHHHHHhC----C-CCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHH
Confidence 112344455433332 2 23322112222334678999999999999986532111 12233333332
Q ss_pred --HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004234 443 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 520 (766)
Q Consensus 443 --v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~ 520 (766)
+...+..+|..|++|+|+||.||++++ ++.++++|||++..+........ .........+++++...-+..+
T Consensus 126 ~~l~~~l~~lH~~~~vH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~ 199 (277)
T cd05062 126 GEIADGMAYLNANKFVHRDLAARNCMVAE--DFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMSPESLKDGVFT 199 (277)
T ss_pred HHHHHHHHHHHHCCcccCCcchheEEEcC--CCCEEECCCCCccccCCcceeec----CCCCccCHhhcChhHhhcCCcC
Confidence 223467889999999999999999986 88999999999876543211000 0001124568888888777778
Q ss_pred CCCCHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFL 536 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l 536 (766)
+..|++++...+.+++
T Consensus 200 ~~~Di~slG~~l~el~ 215 (277)
T cd05062 200 TYSDVWSFGVVLWEIA 215 (277)
T ss_pred chhHHHHHHHHHHHHH
Confidence 8889999987766554
No 172
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.40 E-value=1.9e-12 Score=137.55 Aligned_cols=185 Identities=20% Similarity=0.204 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEeec--------------C--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004234 299 EPIAAASLGQVHRARLK--------------G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--------------G--~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~ 362 (766)
+.||.|++|.||+|+.. | ..||||+.+++.....
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~------------------------------ 60 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTA------------------------------ 60 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHH------------------------------
Confidence 57999999999999862 1 2589998866532210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc---------
Q 004234 363 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL--------- 431 (766)
Q Consensus 363 i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~--------- 431 (766)
.-+|.+|.+.+.++. + ++ +++++. ......+++|||++|++|.++......
T Consensus 61 -----------~~~~~~ei~~l~~l~----h-~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 122 (295)
T cd05097 61 -----------RNDFLKEIKIMSRLK----N-PN--IIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANN 122 (295)
T ss_pred -----------HHHHHHHHHHHHhCC----C-CC--cCeEEEEEcCCCccEEEEecCCCCcHHHHHHhcccccccccccc
Confidence 113455555555542 2 22 233322 334667999999999999886532210
Q ss_pred --CCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHH
Q 004234 432 --GVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDAD 507 (766)
Q Consensus 432 --g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~ 507 (766)
..+...+...+.+ ..+..+|..|++|+|+||+||++++ ++.++++|||++..+....... ..+.......
T Consensus 123 ~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~----~~~~~~~~~~ 196 (295)
T cd05097 123 IPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN--HYTIKIADFGMSRNLYSGDYYR----IQGRAVLPIR 196 (295)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcC--CCcEEecccccccccccCccee----ccCcCcCcee
Confidence 1223333333222 3367789999999999999999985 7899999999987664322100 0111122346
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 508 KVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 508 ~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
+++++....+..+...|++++...+.+++.
T Consensus 197 y~aPE~~~~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 197 WMAWESILLGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred ecChhhhccCCcCchhhHHHHHHHHHHHHH
Confidence 777777777777888999999887766553
No 173
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.40 E-value=3.2e-12 Score=132.61 Aligned_cols=183 Identities=15% Similarity=0.125 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.+|.|++|.||+|.+ .+..+|||+.+++... +-+|
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~-------------------------------------------~~~~ 46 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS-------------------------------------------EDDF 46 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCC-------------------------------------------HHHH
Confidence 5799999999999998 5678999987432110 0123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
..|...+..+ +++++.-..-+.......+++|||++|.+|.+.........+...+.....+ ..+..+|..|+
T Consensus 47 ~~e~~~l~~l-----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 121 (256)
T cd05059 47 IEEAKVMMKL-----SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF 121 (256)
T ss_pred HHHHHHHHhC-----CCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3344433333 1233222222223445679999999999999865432223344443333322 33678899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|.||+++. ++.++++|||++....+..... .........++++++...+..+...|++++...+.++
T Consensus 122 ~H~dl~p~ni~i~~--~~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l 194 (256)
T cd05059 122 IHRDLAARNCLVGE--DNVVKVSDFGLARYVLDDQYTS-----SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEV 194 (256)
T ss_pred ccccccHhhEEECC--CCcEEECCcccceecccccccc-----cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 99999999999986 8899999999988664321100 0000112357788887777777788999998766654
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 195 ~ 195 (256)
T cd05059 195 F 195 (256)
T ss_pred h
Confidence 4
No 174
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.39 E-value=3.8e-12 Score=131.43 Aligned_cols=182 Identities=14% Similarity=0.145 Sum_probs=124.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.|+||+.++..... ..-+
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~-----------------------------------------~~~~ 45 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE-----------------------------------------FRKQ 45 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchH-----------------------------------------HHHH
Confidence 6899999999999999 49999999875432110 1123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+.+|.+.+.++. +++ +++.+ .......+++|||++|.+|.++.... ..++...+...+.+ ..+..+|.
T Consensus 46 ~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~ 117 (264)
T cd06623 46 LLRELKTLRSCE-----SPY--VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHT 117 (264)
T ss_pred HHHHHHHHHhcC-----CCC--eeeEEEEEccCCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 445555555443 222 22332 23346789999999999999875422 33444444433322 23678899
Q ss_pred -CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 453 -HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 -~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
.|++|+|++|+||+++. ++.++|+|||+...+....... ....+...+++++....+..+...|++++...
T Consensus 118 ~~~~~H~~l~~~ni~~~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i 189 (264)
T cd06623 118 KRHIIHRDIKPSNLLINS--KGEVKIADFGISKVLENTLDQC------NTFVGTVTYMSPERIQGESYSYAADIWSLGLT 189 (264)
T ss_pred cCCCccCCCCHHHEEECC--CCCEEEccCccceecccCCCcc------cceeecccccCHhhhCCCCCCchhhHHHHHHH
Confidence 99999999999999986 8999999999998775433221 11224556777888777777778899999987
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 190 l~~l~t 195 (264)
T cd06623 190 LLECAL 195 (264)
T ss_pred HHHHHh
Confidence 776653
No 175
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.39 E-value=2.7e-12 Score=140.18 Aligned_cols=86 Identities=15% Similarity=0.064 Sum_probs=64.8
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 524 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D 524 (766)
..+..+|..|++|+|+||.||+++. ++.++|+|||++..+....... -.........++++++..-+..++..|
T Consensus 184 ~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~D 257 (337)
T cd05054 184 RGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYV----RKGDARLPLKWMAPESIFDKVYTTQSD 257 (337)
T ss_pred HHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchh----hccCCCCCccccCcHHhcCCCCCcccc
Confidence 3477889999999999999999986 8899999999998875432110 011122345678888887777888899
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
++++...+.+++
T Consensus 258 i~SlGv~l~el~ 269 (337)
T cd05054 258 VWSFGVLLWEIF 269 (337)
T ss_pred HHHHHHHHHHHH
Confidence 999998776654
No 176
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.39 E-value=4.5e-12 Score=131.92 Aligned_cols=181 Identities=20% Similarity=0.154 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||+|+.+...... .-.
T Consensus 15 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~------------------------------------------~~~ 52 (267)
T cd06646 15 QRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDD------------------------------------------FSL 52 (267)
T ss_pred heeecCCCeEEEEEEECCCCeEEEEEEEecCccch------------------------------------------HHH
Confidence 6799999999999998 68999999885332111 001
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~ 453 (766)
+.+|+..+..+ +++++ .+...+ ......++||||++|++|.++... ....+...+..... ...+..+|..
T Consensus 53 ~~~e~~~l~~~-----~h~~ii~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 53 IQQEIFMVKEC-----KHCNIVAYFGSY-LSREKLWICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred HHHHHHHHHhc-----CCCCeeeeeEEE-EeCCEEEEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 23344433333 22222 222222 234567899999999999886532 22234333333222 2346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCCHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRR 530 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~---lG~~~~~~D~~~l~~ 530 (766)
|++|+|++|+||+++. ++.++++|||++..+....... ....+...+++++... .+..+...|++++..
T Consensus 126 ~i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~ 197 (267)
T cd06646 126 GKMHRDIKGANILLTD--NGDVKLADFGVAAKITATIAKR------KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGI 197 (267)
T ss_pred CccccCCCHHHEEECC--CCCEEECcCccceeeccccccc------CccccCccccCHhHcccccCCCCcchhhHHHHHH
Confidence 9999999999999985 7889999999998775322110 0112445567777653 233455689999887
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 198 il~el~ 203 (267)
T cd06646 198 TAIELA 203 (267)
T ss_pred HHHHHH
Confidence 666654
No 177
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.39 E-value=2.2e-12 Score=137.80 Aligned_cols=189 Identities=17% Similarity=0.112 Sum_probs=115.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.++.|++|.||+|+. .++.|+||...++.... ... .-+
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---------------------------------~~~------~~~ 47 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLIL---------------------------------RNQ------IQQ 47 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhh---------------------------------HHH------HHH
Confidence 6799999999999998 58999999763321000 000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCC--eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~--~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~ 452 (766)
+.+|.+.+..+ +++ .+++++..+++. .++||||++|++|.++.... .......+...+. -..+..+|.
T Consensus 48 ~~~e~~~l~~~-----~~~--~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~ 119 (305)
T cd05609 48 VFVERDILTFA-----ENP--FVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHN 119 (305)
T ss_pred HHHHHHHHHhC-----CCC--CeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33444433332 223 445666544443 49999999999998875322 1223322222221 234788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHH---------HHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL---------EAFYGIYEKDADKVLQAMVQMGVLVPTG 523 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~---------~l~~a~~~~D~~~v~~~l~~lG~~~~~~ 523 (766)
.|++|+|+||+||+++. ++.++++|||++..........+. ........+...+++++...-+..++..
T Consensus 120 ~~i~H~dl~p~NIll~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 197 (305)
T cd05609 120 YGIVHRDLKPDNLLITS--MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPV 197 (305)
T ss_pred CCccccCCchHHEEECC--CCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchh
Confidence 99999999999999985 889999999987632111000000 0000001234456677766556667788
Q ss_pred CHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFL 536 (766)
Q Consensus 524 D~~~l~~~i~~~l 536 (766)
|++++...+.+++
T Consensus 198 Di~slG~vl~el~ 210 (305)
T cd05609 198 DWWAMGIILYEFL 210 (305)
T ss_pred hHHHHHHHHHHHH
Confidence 9999987766554
No 178
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.39 E-value=3.9e-12 Score=132.79 Aligned_cols=181 Identities=15% Similarity=0.122 Sum_probs=119.3
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|.||+|++ ++..||||+.++.-.. +-+|
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~-------------------------------------------~~~~ 48 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-------------------------------------------PEAF 48 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccC-------------------------------------------HHHH
Confidence 4699999999999998 4567999987431100 0134
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
.+|...+.++. ++++ .+...+ .....+++|||++|++|.++.... ....+...+.....+ ..+..+|..
T Consensus 49 ~~E~~~l~~l~-----~~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~ 121 (262)
T cd05071 49 LQEAQVMKKLR-----HEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 121 (262)
T ss_pred HHHHHHHHhCC-----CCCcceEEEEE--CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 55655555542 2322 222222 234579999999999998875422 122343443333322 336778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|+||++++ ++.++|+|||.+..+....... .....++..++.++....+..+...|++++...+.
T Consensus 122 ~i~H~dl~p~Nill~~--~~~~~L~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ 194 (262)
T cd05071 122 NYVHRDLRAANILVGE--NLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (262)
T ss_pred CccccccCcccEEEcC--CCcEEeccCCceeecccccccc-----ccCCcccceecCHhHhccCCCCchhhHHHHHHHHH
Confidence 9999999999999986 8899999999998776433111 01112345678888877777777889999988776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 195 ell 197 (262)
T cd05071 195 ELT 197 (262)
T ss_pred HHH
Confidence 654
No 179
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.39 E-value=5.6e-12 Score=122.83 Aligned_cols=132 Identities=23% Similarity=0.345 Sum_probs=96.6
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.+|++.|..++||+++..|+.|++|+..++.. ...++
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-------------------------------------------~~~~~ 39 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-------------------------------------------LLINR 39 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc-------------------------------------------cccCH
Confidence 36899999999999999999999998754321 01245
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC---
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG--- 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~G--- 454 (766)
..|++++..+.+. ..+|+++....+..+++|||++|.++.+... .+ ...... +...+..+|..+
T Consensus 40 ~~E~~~l~~l~~~------~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~-~~~~~~-l~~~l~~LH~~~~~~ 106 (170)
T cd05151 40 ENEAENSKLAAEA------GIGPKLYYFDPETGVLITEFIEGSELLTEDF-----SD-PENLEK-IAKLLKKLHSSPLPD 106 (170)
T ss_pred HHHHHHHHHHHHh------CCCCceEEEeCCCCeEEEEecCCCccccccc-----cC-HHHHHH-HHHHHHHHhCCCCCC
Confidence 6777777777552 2368888876667899999999998875310 11 122222 334466778776
Q ss_pred --ccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 455 --FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 455 --ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
++|+|+||+||+++ +++++++|||.++.-++
T Consensus 107 ~~~~HgD~~~~Nil~~---~~~~~liDf~~a~~~~~ 139 (170)
T cd05151 107 LVPCHNDLLPGNFLLD---DGRLWLIDWEYAGMNDP 139 (170)
T ss_pred ceeecCCCCcCcEEEE---CCeEEEEecccccCCCh
Confidence 59999999999997 56899999999986543
No 180
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.39 E-value=4e-12 Score=134.20 Aligned_cols=183 Identities=16% Similarity=0.146 Sum_probs=115.1
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|.. +|+.||||+..+.....-. .+..+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~---------------------------------------~~~~~ 41 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ---------------------------------------GETLA 41 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccch---------------------------------------hHHHH
Confidence 479999999999998 5899999987542111000 01112
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
..|...+..... . +++.+ +..+.. .....++||||++|+.|.+.... ...+....+...+.+ ..+..+|..
T Consensus 42 ~~~~~~~~~~~~-~-~~~~i--~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~ 116 (278)
T cd05606 42 LNERIMLSLVST-G-DCPFI--VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNR 116 (278)
T ss_pred HHHHHHHHHHHh-C-CCCcE--eeeeeeeecCCEEEEEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222222222221 1 22322 233222 23457899999999999876532 122344433333322 236778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i 532 (766)
|++|+|++|.||+++. ++.++++|||++..+...... ...+...++++++...+ ..+...|++++...+
T Consensus 117 ~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l 186 (278)
T cd05606 117 FVVYRDLKPANILLDE--HGHVRISDLGLACDFSKKKPH--------ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCML 186 (278)
T ss_pred CEEcCCCCHHHEEECC--CCCEEEccCcCccccCccCCc--------CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHH
Confidence 9999999999999985 789999999998876543221 11345667778877654 356778999998777
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 187 ~~l~ 190 (278)
T cd05606 187 FKLL 190 (278)
T ss_pred HHHH
Confidence 6655
No 181
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.39 E-value=1.2e-12 Score=149.48 Aligned_cols=178 Identities=14% Similarity=0.033 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|.||+|+. .++.||||..... .
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~------------------------------------------------~ 206 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGWYA------------------------------------------------S 206 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccccc------------------------------------------------C
Confidence 5799999999999999 4899999943100 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|++.+.++. +++|.-..-+.......+|+||++.| .+.+........++...+...+.+ ..+..+|..|
T Consensus 207 ~~~E~~iL~~L~-----HpnIv~l~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g 280 (461)
T PHA03211 207 SVHEARLLRRLS-----HPAVLALLDVRVVGGLTCLVLPKYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEG 280 (461)
T ss_pred HHHHHHHHHHCC-----CCCCCcEEEEEEECCEEEEEEEccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 123444444442 23332222222335667999999976 455443222223455554444433 3478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.|||++. ++.++|+|||++..+........ .....+...++++++..-+..+...|++++...+.+
T Consensus 281 IvHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~~----~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~E 354 (461)
T PHA03211 281 IIHRDIKTENVLVNG--PEDICLGDFGAACFARGSWSTPF----HYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354 (461)
T ss_pred EEECcCCHHHEEECC--CCCEEEcccCCceeccccccccc----ccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHH
Confidence 999999999999985 78999999999987654322111 111246778888998877667778899999987776
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 355 l~ 356 (461)
T PHA03211 355 AA 356 (461)
T ss_pred HH
Confidence 54
No 182
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.39 E-value=1.1e-12 Score=137.35 Aligned_cols=186 Identities=20% Similarity=0.262 Sum_probs=124.0
Q ss_pred ccccccceeEEEEEeec------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+-||.|+||.||+|.+. +..|+||+..+.....
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~----------------------------------------- 43 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEE----------------------------------------- 43 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHH-----------------------------------------
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccc-----------------------------------------
Confidence 45899999999999996 6899999985532211
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQ 449 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~q 449 (766)
..-+|.+|++.+.++ +++++.-..-+........++|||+++++|.++.... ...++...+...+.+ ..+..
T Consensus 44 ~~~~~~~e~~~l~~l-----~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~ 118 (259)
T PF07714_consen 44 EEEEFLNEIQILRKL-----RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSY 118 (259)
T ss_dssp HHHHHHHHHHHHHTH-----SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHH
T ss_pred cceeeeecccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 122455566655554 2233332222323456689999999999999976543 344566665555444 34778
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..+++|+|++|.||+++. ++.++|.|||+........... ..........+++++...-+..+..+|+++|.
T Consensus 119 Lh~~~iiH~~l~~~nill~~--~~~~Kl~~f~~~~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG 192 (259)
T PF07714_consen 119 LHSNNIIHGNLSPSNILLDS--NGQVKLSDFGLSRPISEKSKYK----NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFG 192 (259)
T ss_dssp HHHTTEEEST-SGGGEEEET--TTEEEEESTTTGEETTTSSSEE----ESTTSESGGGGS-HHHHHHSEESHHHHHHHHH
T ss_pred cccccccccccccccccccc--cccccccccccccccccccccc----cccccccccccccccccccccccccccccccc
Confidence 99999999999999999986 8899999999998873221110 00111234566788888877778888999999
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
-.+.+++
T Consensus 193 ~~l~ei~ 199 (259)
T PF07714_consen 193 MLLYEIL 199 (259)
T ss_dssp HHHHHHH
T ss_pred ccccccc
Confidence 8776655
No 183
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.39 E-value=3.3e-12 Score=132.22 Aligned_cols=177 Identities=16% Similarity=0.167 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+.+|.|++|+||++..+|+.||+|+.+.... . -.|.
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~--------------------------------------~------~~~~ 47 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVT--------------------------------------A------QAFL 47 (254)
T ss_pred eeeccCCCCceEecccCCCceEEEeecCcch--------------------------------------H------HHHH
Confidence 6799999999999998999999997632110 0 0233
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHH--HHHHHHHHhCCc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAV--ESYLEQILSHGF 455 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv--~~~l~qI~~~Gf 455 (766)
+|...+.++ .+..-+.+...+ .....+++|||++|++|.++..... ...+...+...+. -..+..+|..|+
T Consensus 48 ~e~~~l~~~----~~~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~ 121 (254)
T cd05083 48 EETAVMTKL----HHKNLVRLLGVI--LHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL 121 (254)
T ss_pred HHHHHHHhC----CCCCcCeEEEEE--cCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 444433333 222223333333 2345799999999999998754322 2234443333222 233678899999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|+|++|+||+++. ++.++|+|||.+......... ......+++++....+..+...|++++...+.++
T Consensus 122 ~H~dl~p~nili~~--~~~~kl~Dfg~~~~~~~~~~~---------~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el 190 (254)
T cd05083 122 VHRDLAARNILVSE--DGVAKVSDFGLARVGSMGVDN---------SKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEV 190 (254)
T ss_pred eccccCcceEEEcC--CCcEEECCCccceeccccCCC---------CCCCceecCHHHhccCCcCchhhHHHHHHHHHHH
Confidence 99999999999985 889999999998765432110 1123446677777767777788999998777665
Q ss_pred H
Q 004234 536 L 536 (766)
Q Consensus 536 l 536 (766)
+
T Consensus 191 ~ 191 (254)
T cd05083 191 F 191 (254)
T ss_pred H
Confidence 5
No 184
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.39 E-value=5.4e-12 Score=130.19 Aligned_cols=186 Identities=12% Similarity=0.054 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|.|++|.||+|.. +|+.||||........ .... -.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----------------------------------~~~~------~~ 45 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS----------------------------------RRER------KA 45 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC----------------------------------HHHH------HH
Confidence 5789999999999998 5889999986211100 0000 12
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++ .+...+.+...+.......+++|||++|.++.+..... ....+...+...+.+ ..+..+|..
T Consensus 46 ~~~e~~~l~~l----~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 46 AEQEAQLLSQL----KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred HHHHHHHHHhC----CCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 23344333333 22222222222322233468999999999998865322 122444444333332 336789999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++|+|||++..+...... .....+.+.++++++...+..+...|++++...+.
T Consensus 122 ~i~H~di~p~nil~~~--~~~~~l~df~~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 193 (257)
T cd08223 122 HILHRDLKTQNVFLTR--TNIIKVGDLGIARVLENQCDM------ASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVY 193 (257)
T ss_pred CeeccCCCchhEEEec--CCcEEEecccceEEecccCCc------cccccCCcCccChhHhcCCCCCchhhhHHHHHHHH
Confidence 9999999999999985 889999999999876432210 01123456678888887777777889999987766
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 194 ~l~ 196 (257)
T cd08223 194 EMA 196 (257)
T ss_pred HHH
Confidence 554
No 185
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.39 E-value=4e-12 Score=134.54 Aligned_cols=186 Identities=16% Similarity=0.094 Sum_probs=117.0
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|.||+|..+ +..||||....... .
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-----------------------------------------~ 50 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----------------------------------------L 50 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-----------------------------------------H
Confidence 67999999999999752 45899997632110 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------cCCCHHHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------LGVDRKRLGRYA 442 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------~g~d~~~la~~l 442 (766)
....++.+|...+.++. ++++....-+.......+++|||++|++|.+...... ...+...+...+
T Consensus 51 ~~~~~~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (288)
T cd05061 51 RERIEFLNEASVMKGFT-----CHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 125 (288)
T ss_pred HHHHHHHHHHHHHHhCC-----CCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHH
Confidence 11224455555554442 2333222222233456799999999999998753211 111223333332
Q ss_pred H--HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004234 443 V--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 520 (766)
Q Consensus 443 v--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~ 520 (766)
. ...+..+|..|++|+|+||.||+++. ++.++++|||++..+.......- .........+++++...-+..+
T Consensus 126 ~~l~~~l~~lH~~~i~H~dikp~nili~~--~~~~~L~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~ 199 (288)
T cd05061 126 AEIADGMAYLNAKKFVHRDLAARNCMVAH--DFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGVFT 199 (288)
T ss_pred HHHHHHHHHHHhCCCcCCCCChheEEEcC--CCcEEECcCCccccccccccccc----cCCCcccccccCHHHhccCCCC
Confidence 2 23367889999999999999999986 88999999999886543221000 0001123457778877777777
Q ss_pred CCCCHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFL 536 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l 536 (766)
+..|++++...+.+++
T Consensus 200 ~~~DvwslG~~l~el~ 215 (288)
T cd05061 200 TSSDMWSFGVVLWEIT 215 (288)
T ss_pred hHhHHHHHHHHHHHHH
Confidence 8889999987766554
No 186
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.38 E-value=8.2e-12 Score=129.79 Aligned_cols=186 Identities=13% Similarity=0.051 Sum_probs=119.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||..++-... + ...+.+
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----------------------------~-----------~~~~~~ 48 (267)
T cd08228 8 KKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMM----------------------------D-----------AKARQD 48 (267)
T ss_pred eeeccCCCeeEEEEEEeCCCCEEEEEEeeccccC----------------------------C-----------HHHHHH
Confidence 5799999999999998 6899999976321000 0 011234
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHH--HHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYA--VESYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~--~~g~d~~~la~~l--v~~~l~qI~ 451 (766)
|.+|...+..+. ++++.-+.-+.......+++|||++|++|.++... . ....+...+...+ +...+..+|
T Consensus 49 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08228 49 CVKEIDLLKQLN-----HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123 (267)
T ss_pred HHHHHHHHHhCC-----CcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 455555444432 23222221122234567999999999999886532 1 1123333333332 223367789
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|++|.||+++. ++.++++|||++..+...... .....+...+++++.......+...|++++...
T Consensus 124 ~~~i~H~dl~~~nil~~~--~~~~~l~d~g~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~ 195 (267)
T cd08228 124 SRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL 195 (267)
T ss_pred hCCeeCCCCCHHHEEEcC--CCCEEECccccceeccchhHH------HhcCCCCccccChhhhccCCCCchhhHHHHHHH
Confidence 999999999999999986 889999999999887653321 111235566777887765555667899998876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 196 l~el~ 200 (267)
T cd08228 196 LYEMA 200 (267)
T ss_pred HHHHh
Confidence 66554
No 187
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.38 E-value=1.5e-12 Score=141.08 Aligned_cols=183 Identities=19% Similarity=0.216 Sum_probs=115.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+-||.|++|.||.|.. +|+..|||...-. . .+. .+.+.+|+.
T Consensus 23 ~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~--~----------------------------~~~------~~~l~~Ei~ 66 (313)
T KOG0198|consen 23 KLLGRGSFGSVYLATNKKTGELMAVKSVELE--D----------------------------SPT------SESLEREIR 66 (313)
T ss_pred ccccCccceEEEEEEecCCCcceeeeeeecc--c----------------------------chh------HHHHHHHHH
Confidence 5799999999999999 4999999965110 0 000 223334433
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec---cC-CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE---YT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e---~s-t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI 450 (766)
. +.++ . +++ |.+.|.. .. ....+.|||++|++|.++.......+....+.... +-.-+.++
T Consensus 67 i------L~~l----~-~p~--IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~yl 133 (313)
T KOG0198|consen 67 I------LSRL----N-HPN--IVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYL 133 (313)
T ss_pred H------HHhC----C-CCC--EEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 2222 2 111 1111211 11 14789999999999999764332223433333222 33448889
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC-CCCCHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV-PTGDTTAVR 529 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~-~~~D~~~l~ 529 (766)
|.+||+|||+||.|||++. .++.++|.|||++..+...... .....-..+.+.+|+|+...-|... +..|+.++.
T Consensus 134 Hs~g~vH~DiK~~NiLl~~-~~~~~KlaDFG~a~~~~~~~~~---~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG 209 (313)
T KOG0198|consen 134 HSKGIVHCDIKPANILLDP-SNGDVKLADFGLAKKLESKGTK---SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG 209 (313)
T ss_pred HhCCEeccCcccceEEEeC-CCCeEEeccCcccccccccccc---ccccccccCCccccCchhhcCCCcCCccchhhhcC
Confidence 9999999999999999984 2589999999999988741000 0001123567899999999866433 478999887
Q ss_pred HHHHH
Q 004234 530 RTAQF 534 (766)
Q Consensus 530 ~~i~~ 534 (766)
-.+-+
T Consensus 210 CtVvE 214 (313)
T KOG0198|consen 210 CTVVE 214 (313)
T ss_pred CEEEe
Confidence 65433
No 188
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.38 E-value=3.3e-12 Score=136.25 Aligned_cols=182 Identities=18% Similarity=0.158 Sum_probs=120.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|.||+|+. +|+.|++|......... .-.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~------------------------------------------~~~ 63 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK------------------------------------------KEL 63 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch------------------------------------------HHH
Confidence 5699999999999997 58999999763211100 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+ +++++.-..-+.......++||||++|++|.++.. ....+...+...+.+ ..+..+|..|
T Consensus 64 ~~~e~~~l~~~-----~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 64 IINEILVMREN-----KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred HHHHHHHHHhC-----CCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33444433332 22333222112223457899999999999998753 222344444443322 3367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||+...+.+..... ....+.+.++++++...+..++..|++++...+.+
T Consensus 137 i~H~dLkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~ 208 (296)
T cd06654 137 VIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208 (296)
T ss_pred cccCCCCHHHEEEcC--CCCEEECccccchhcccccccc------CcccCCccccCHHHHcCCCCCccchHHHHHHHHHH
Confidence 999999999999985 8899999999988765543211 11234567788888877777788999999887766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 209 l~~ 211 (296)
T cd06654 209 MIE 211 (296)
T ss_pred HHh
Confidence 653
No 189
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.38 E-value=5.8e-12 Score=130.52 Aligned_cols=187 Identities=14% Similarity=0.072 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||+|..++.-... .. ..-+
T Consensus 8 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---------------------------------~~------~~~~ 48 (267)
T cd08224 8 KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD---------------------------------AK------ARQD 48 (267)
T ss_pred eeeccCCceEEEEEEEcCCCCEEEEEEeecccccc---------------------------------hh------hHHH
Confidence 6799999999999999 59999999874311000 00 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~--~~g~d~~~la~~lv~--~~l~qI~ 451 (766)
+.+|...+.++ .+ +++.-+.-+.......+++|||++|++|.++... . ...++...+...+.+ ..+..+|
T Consensus 49 ~~~ei~~l~~~----~~-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 49 CLKEIDLLKQL----DH-PNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHhC----CC-CCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 33444433333 12 2222222122234567999999999999886432 1 122344444333333 2367789
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|++|.||+++. ++.++++|||++..+........ ...+...+++++.......+...|++++...
T Consensus 124 ~~~i~h~dl~p~nil~~~--~~~~~l~d~~~~~~~~~~~~~~~------~~~~~~~y~apE~~~~~~~~~~~Di~slG~i 195 (267)
T cd08224 124 SKRIMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTAAH------SLVGTPYYMSPERIHENGYNFKSDIWSLGCL 195 (267)
T ss_pred hCCEecCCcChhhEEECC--CCcEEEeccceeeeccCCCcccc------eecCCccccCHHHhccCCCCchhcHHHHHHH
Confidence 999999999999999986 88999999999887654322110 0123445667776665556677899999877
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 196 l~~l~~ 201 (267)
T cd08224 196 LYEMAA 201 (267)
T ss_pred HHHHHH
Confidence 766553
No 190
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.38 E-value=3.1e-12 Score=133.37 Aligned_cols=193 Identities=15% Similarity=0.178 Sum_probs=120.0
Q ss_pred ChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004234 288 PLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (766)
Q Consensus 288 ~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~ 365 (766)
+++..|... +.+|.|++|+||+|.. +++.||||+....-..
T Consensus 3 ~~~~~y~~~--~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----------------------------------- 45 (272)
T cd06637 3 DPAGIFELV--ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----------------------------------- 45 (272)
T ss_pred ChhhhhhHH--HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc-----------------------------------
Confidence 344555433 4699999999999998 5899999987321100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-cccceeeec-----cCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHH
Q 004234 366 ECASVLYQEIDYTQEAANAELFASNFKDMDY-VKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRL 438 (766)
Q Consensus 366 E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~l 438 (766)
+.++..|...+.++. ++++ +.+...+.. .....+++|||+.|++|.++..... ..+....+
T Consensus 46 --------~~~~~~e~~~l~~~~----~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~ 113 (272)
T cd06637 46 --------EEEIKQEINMLKKYS----HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI 113 (272)
T ss_pred --------HHHHHHHHHHHHHhc----CCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHH
Confidence 112333333333331 1222 222222221 1234689999999999998654322 22343333
Q ss_pred HHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004234 439 GRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 516 (766)
Q Consensus 439 a~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l 516 (766)
.... +...+..+|..|++|+|+||+||++++ ++.++++|||++..+....... ....+...++++++...
T Consensus 114 ~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~Dfg~~~~~~~~~~~~------~~~~g~~~y~aPE~~~~ 185 (272)
T cd06637 114 AYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIAC 185 (272)
T ss_pred HHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEccCCCceecccccccC------CcccccccccCHhHhcc
Confidence 3332 223467899999999999999999986 7899999999988765432211 11224556777877652
Q ss_pred -----CCCCCCCCHHHHHHHHHHHHH
Q 004234 517 -----GVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 517 -----G~~~~~~D~~~l~~~i~~~l~ 537 (766)
+..+...|++++...+.+++.
T Consensus 186 ~~~~~~~~~~~~Dv~slGv~l~el~~ 211 (272)
T cd06637 186 DENPDATYDFKSDLWSLGITAIEMAE 211 (272)
T ss_pred ccCcCCCCCchhhHHHHHHHHHHHHh
Confidence 234556899999877766653
No 191
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.38 E-value=4.1e-12 Score=132.79 Aligned_cols=183 Identities=16% Similarity=0.091 Sum_probs=113.3
Q ss_pred cccccceeEEEEEee-c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL-K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 300 PIgsaSiGQVhrA~l-~---G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.||+|++|.||+|.+ + +..||+|..+..... ..+.
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------------~~~~ 40 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV-----------------------------------------QEQM 40 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh-----------------------------------------HHHH
Confidence 589999999999987 2 467999976432110 1233
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc----CCCHHHHHHHH--HHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL----GVDRKRLGRYA--VESYL 447 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~----g~d~~~la~~l--v~~~l 447 (766)
+|.+|...+.++. +++ +++++. ...+..++||||++|++|.++...... ..+...+...+ +...+
T Consensus 41 ~~~~E~~~l~~l~-----h~~--iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al 113 (269)
T cd05087 41 KFLEEAQPYRSLQ-----HSN--LLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGL 113 (269)
T ss_pred HHHHHHHHHHhCC-----CCC--EeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHH
Confidence 5666666555542 233 233332 234567999999999999886532111 12222222221 22346
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-------CCC
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-------VLV 520 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-------~~~ 520 (766)
..+|..|++|+|+||.||+++. ++.++++|||++........... .....+...++++++.... ..+
T Consensus 114 ~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05087 114 LHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYKEDYYVT----PDQLWVPLRWIAPELVDEVHGNLLVVDQT 187 (269)
T ss_pred HHHHHCCEeccccCcceEEEcC--CCcEEECCccccccccCcceeec----CCCcCCcccccCHhHhccccccccccCCC
Confidence 7789999999999999999986 78999999998865433211000 0001123456777776521 135
Q ss_pred CCCCHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFL 536 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l 536 (766)
...|++++...+.+++
T Consensus 188 ~~~DiwslG~~l~el~ 203 (269)
T cd05087 188 KESNVWSLGVTIWELF 203 (269)
T ss_pred ccchhHHHHHHHHHHH
Confidence 5789999987766554
No 192
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.38 E-value=2.7e-12 Score=142.35 Aligned_cols=86 Identities=15% Similarity=0.090 Sum_probs=64.1
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 524 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D 524 (766)
..+..+|..|++|+|++|.||++++ ++.++|+|||++..+....... ..+.......+++++....+..++..|
T Consensus 223 ~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~D 296 (374)
T cd05106 223 QGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSNYV----VKGNARLPVKWMAPESIFDCVYTVQSD 296 (374)
T ss_pred HHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCccee----eccCCCCccceeCHHHhcCCCCCcccc
Confidence 3477889999999999999999985 8899999999998764432111 011112234578888887777888999
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
++++...+.+++
T Consensus 297 vwSlGvil~ell 308 (374)
T cd05106 297 VWSYGILLWEIF 308 (374)
T ss_pred HHHHHHHHHHHH
Confidence 999988776654
No 193
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.38 E-value=3.3e-12 Score=135.24 Aligned_cols=182 Identities=16% Similarity=0.196 Sum_probs=115.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.|++|+......+. .-+
T Consensus 18 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~------------------------------------------~~~ 55 (292)
T cd06644 18 GELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE------------------------------------------LED 55 (292)
T ss_pred heecCCCCeEEEEEEECCCCceEEEEEeccCCHHH------------------------------------------HHH
Confidence 4599999999999998 48999999874321110 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+..|...+..+. ++++ .+...+ ...+..+++|||++|+.+..+.......++...+...+.+ ..+..+|..
T Consensus 56 ~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 56 YMVEIEILATCN-----HPYIVKLLGAF-YWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred HHHHHHHHHhCC-----CCcEeeeEEEE-EeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 444555444432 2222 222222 3456789999999999998754322333454444333322 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCCCCCCHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLVPTGDTTAV 528 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~~~~~~D~~~l 528 (766)
|++|+|+||.||+++. ++.++|+|||++.......... ....++..++++++... ...+...|++++
T Consensus 130 ~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 201 (292)
T cd06644 130 KIIHRDLKAGNVLLTL--DGDIKLADFGVSAKNVKTLQRR------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 201 (292)
T ss_pred CeeecCCCcceEEEcC--CCCEEEccCccceecccccccc------ceecCCccccCceeeccccccCCCCCchhhhHhH
Confidence 9999999999999985 8899999999887643321110 01123455667766532 223446799999
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+.+++
T Consensus 202 G~il~el~ 209 (292)
T cd06644 202 GITLIEMA 209 (292)
T ss_pred HHHHHHHh
Confidence 87776654
No 194
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.38 E-value=4.8e-12 Score=131.76 Aligned_cols=182 Identities=21% Similarity=0.204 Sum_probs=116.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|+. +|+.||+|+.+....... . .
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------------------------------------~------~ 52 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDF------------------------------------A------V 52 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHH------------------------------------H------H
Confidence 5799999999999998 589999998854321110 0 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+ .+..-+.+...+ ......+++|||++|++|.++.... ...+...+.....+ ..+..+|..|
T Consensus 53 ~~~e~~~~~~l----~h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 126 (267)
T cd06645 53 VQQEIIMMKDC----KHSNIVAYFGSY-LRRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKG 126 (267)
T ss_pred HHHHHHHHHhC----CCCCeeeEEEEE-EeCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22233222222 221112222222 2345679999999999999865322 23444444433332 3367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCCHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRRT 531 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~---lG~~~~~~D~~~l~~~ 531 (766)
++|+|++|+||+++. ++.++++|||++..+....... ....++..+++++... .+......|++++...
T Consensus 127 i~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i 198 (267)
T cd06645 127 KMHRDIKGANILLTD--NGHVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT 198 (267)
T ss_pred eecCCCCHHHEEECC--CCCEEECcceeeeEccCccccc------ccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence 999999999999985 7899999999988765422110 1113456677888763 3445667899999876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 199 l~~l~ 203 (267)
T cd06645 199 AIELA 203 (267)
T ss_pred HHHHh
Confidence 65543
No 195
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.38 E-value=3.2e-12 Score=133.37 Aligned_cols=188 Identities=16% Similarity=0.166 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee--cC---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G---~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+-+|.|++|.||+|.+ +| ..||||+......+. .
T Consensus 10 ~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~------ 48 (269)
T cd05065 10 EVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEK-----------------------------------Q------ 48 (269)
T ss_pred eEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHH-----------------------------------H------
Confidence 5699999999999998 34 369999874332111 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~ 451 (766)
.-+|..|+..+..+ +++++.-..-+..-....+++|||++|++|.++.......++...+...+.+ ..+..+|
T Consensus 49 ~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH 123 (269)
T cd05065 49 RRDFLSEASIMGQF-----DHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS 123 (269)
T ss_pred HHHHHHHHHHHHhC-----CCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01344455544443 2233322222223345679999999999998876443333455544443332 3467889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~-l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
..|++|+|+||.||+++. ++.+++.|||....+....... +.... + ......++.++...-+..+...|++++..
T Consensus 124 ~~g~~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~-~-~~~~~~y~~PE~~~~~~~~~~~DvwslG~ 199 (269)
T cd05065 124 EMNYVHRDLAARNILVNS--NLVCKVSDFGLSRFLEDDTSDPTYTSSL-G-GKIPIRWTAPEAIAYRKFTSASDVWSYGI 199 (269)
T ss_pred HCCEeecccChheEEEcC--CCcEEECCCccccccccCcccccccccc-C-CCcceeecCHhHhccCcccchhhhhhhHH
Confidence 999999999999999985 7899999999987664422111 00000 0 00123466777776666677889999887
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 200 ~l~e~l 205 (269)
T cd05065 200 VMWEVM 205 (269)
T ss_pred HHHHHh
Confidence 665543
No 196
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.38 E-value=2e-12 Score=144.63 Aligned_cols=176 Identities=12% Similarity=0.065 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||||+... . .
T Consensus 98 ~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------------------------------------------~------~ 129 (391)
T PHA03212 98 ETFTPGAEGFAFACIDNKTCEHVVIKAGQR------------------------------------------G------G 129 (391)
T ss_pred EEEcCCCCeEEEEEEECCCCCEEEEechhh------------------------------------------h------h
Confidence 6799999999999998 589999995310 0 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|++.+.++ .+ ++| .+-..+ ......+++||++.| .+.+... ....++...+.....+ ..+..+|..
T Consensus 130 ~~~E~~il~~l----~H-pnIv~~~~~~-~~~~~~~lv~e~~~~-~L~~~l~-~~~~l~~~~~~~i~~qi~~aL~ylH~~ 201 (391)
T PHA03212 130 TATEAHILRAI----NH-PSIIQLKGTF-TYNKFTCLILPRYKT-DLYCYLA-AKRNIAICDILAIERSVLRAIQYLHEN 201 (391)
T ss_pred hHHHHHHHHhC----CC-CCCCCEeEEE-EECCeeEEEEecCCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22344444443 22 332 222222 345667999999975 4544332 1223444433333322 347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||+||+++. ++.++|+|||++........... .-..+.+.++++++...+..++..|++++...+.
T Consensus 202 ~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 274 (391)
T PHA03212 202 RIIHRDIKAENIFINH--PGDVCLGDFGAACFPVDINANKY-----YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLF 274 (391)
T ss_pred CcccCCCChHhEEEcC--CCCEEEEeCCccccccccccccc-----ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999999999985 78999999999865432211111 1123566777888877666777889999998887
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 275 ellt 278 (391)
T PHA03212 275 EMAT 278 (391)
T ss_pred HHHH
Confidence 7664
No 197
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.38 E-value=5.4e-12 Score=131.19 Aligned_cols=182 Identities=15% Similarity=0.122 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
..||+|++|+||+|.+ .+..||+|+.+++-.. +-+|
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM-------------------------------------------PEAF 48 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCcc-------------------------------------------HHHH
Confidence 5799999999999998 4568999987543110 0123
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
.+|.+.+.++ .+...+.+...+ .....+++|||++|++|.++..... ...+...+..... -..+..+|..|
T Consensus 49 ~~E~~~l~~l----~h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~ 122 (260)
T cd05069 49 LQEAQIMKKL----RHDKLVPLYAVV--SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN 122 (260)
T ss_pred HHHHHHHHhC----CCCCeeeEEEEE--cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4454444433 222223333333 2355799999999999988654221 1233333333222 23467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|+||++++ ++.++|+|||.+..+........ .-......+++++....+..+...|++++...+.+
T Consensus 123 i~H~dl~~~Nill~~--~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05069 123 YIHRDLRAANILVGD--NLVCKIADFGLARLIEDNEYTAR-----QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred EeecccCcceEEEcC--CCeEEECCCccceEccCCccccc-----CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHH
Confidence 999999999999986 88999999999987654321110 00122345777777776777778899999877766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 196 l~ 197 (260)
T cd05069 196 LV 197 (260)
T ss_pred HH
Confidence 54
No 198
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.38 E-value=3.8e-12 Score=133.73 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=122.1
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||+|++|+||+|.+ +|+ .|++|+..+.... .
T Consensus 13 ~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~-----------------------------------------~ 51 (279)
T cd05057 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP-----------------------------------------K 51 (279)
T ss_pred ceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH-----------------------------------------H
Confidence 6899999999999998 343 6899976433210 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
....+.+|+..+.++. +..-+.+.... .+...+++|||++|++|.+.........+...+...+.+ ..+..+
T Consensus 52 ~~~~~~~e~~~l~~l~----h~~i~~~~~~~--~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~L 125 (279)
T cd05057 52 ANKEILDEAYVMASVD----HPHVVRLLGIC--LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYL 125 (279)
T ss_pred HHHHHHHHHHHHHhCC----CCCcceEEEEE--ecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1124556666665542 22222222222 237789999999999999875433333555555444433 346788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|++|.||+++. ++.++|+|||++..+........ ..-......++.++....+..+...|.+++..
T Consensus 126 H~~~i~H~di~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~ 199 (279)
T cd05057 126 EEKRLVHRDLAARNVLVKT--PQHVKITDFGLAKLLDVDEKEYH----AEGGKVPIKWMALESILHRIYTHKSDVWSYGV 199 (279)
T ss_pred HhCCEEecccCcceEEEcC--CCeEEECCCcccccccCccccee----cCCCcccccccCHHHhhcCCcCchhhHHHHHH
Confidence 9999999999999999985 78999999999987764322110 00011134567777777677777889999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 200 ~l~el~ 205 (279)
T cd05057 200 TVWELM 205 (279)
T ss_pred HHHHHh
Confidence 666554
No 199
>PHA02988 hypothetical protein; Provisional
Probab=99.38 E-value=6.9e-12 Score=133.32 Aligned_cols=183 Identities=10% Similarity=0.018 Sum_probs=119.9
Q ss_pred CcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+...++.|+++.||+|.++|+.||||+.+..-... ..++ -+
T Consensus 24 ~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~-----------------------------~~~~----------~~ 64 (283)
T PHA02988 24 TSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGH-----------------------------KVLI----------DI 64 (283)
T ss_pred CCeEEeeCCceEEEEEEECCEEEEEEecccccccc-----------------------------HHHH----------HH
Confidence 34679999999999999999999999874321100 0000 13
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee---c---cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW---E---YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLE 448 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~---e---~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~ 448 (766)
|.+|+..+.++. + + .+.+.+. + -....+++|||++|++|.++.... ...+.......+.+ ..+.
T Consensus 65 ~~~E~~~l~~l~----h-~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~ 136 (283)
T PHA02988 65 TENEIKNLRRID----S-N--NILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLY 136 (283)
T ss_pred HHHHHHHHHhcC----C-C--CEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHH
Confidence 455666666653 2 2 2333332 2 123568999999999999875422 22333333333222 2366
Q ss_pred HHHh-CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc--CCCCCCCCH
Q 004234 449 QILS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM--GVLVPTGDT 525 (766)
Q Consensus 449 qI~~-~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l--G~~~~~~D~ 525 (766)
.+|. .|++|+|++|.||+++. ++.++++|||++..++..... ..+...++++++..- +..+...|+
T Consensus 137 ~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~k~Di 205 (283)
T PHA02988 137 NLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGLEKILSSPPFK---------NVNFMVYFSYKMLNDIFSEYTIKDDI 205 (283)
T ss_pred HHHhcCCCCCCcCChhhEEECC--CCcEEEcccchHhhhcccccc---------ccCcccccCHHHhhhccccccchhhh
Confidence 7786 59999999999999986 889999999998866543211 123455667777653 456778899
Q ss_pred HHHHHHHHHHHH
Q 004234 526 TAVRRTAQFFLN 537 (766)
Q Consensus 526 ~~l~~~i~~~l~ 537 (766)
+++...+.+++.
T Consensus 206 ~SlGvil~el~~ 217 (283)
T PHA02988 206 YSLGVVLWEIFT 217 (283)
T ss_pred hHHHHHHHHHHH
Confidence 999987776654
No 200
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.38 E-value=7.1e-12 Score=134.10 Aligned_cols=182 Identities=15% Similarity=0.166 Sum_probs=113.6
Q ss_pred ccccccceeEEEEEee--cCeeE--EEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEV--VVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~V--AVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.||.|++|+||+|++ +|..+ ++|.......+. . .
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------~------~ 51 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-----------------------------------D------H 51 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHH-----------------------------------H------H
Confidence 6899999999999998 46554 555432211100 0 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKR 437 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~~~ 437 (766)
-++.+|...+.++. ++++ +++++ ....+..+++|||++|++|.++..... ..++...
T Consensus 52 ~~~~~Ei~~l~~l~----~h~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 125 (303)
T cd05088 52 RDFAGELEVLCKLG----HHPN--IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 125 (303)
T ss_pred HHHHHHHHHHHHhc----CCCC--cceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHH
Confidence 12334444444432 2333 33333 234566799999999999988653211 1133333
Q ss_pred HHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 438 LGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 438 la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
+...+.+ ..+..+|..|++|+|++|.||+++. ++.++|+|||++.......... .......+++++...
T Consensus 126 ~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~ 196 (303)
T cd05088 126 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKT-------MGRLPVRWMAIESLN 196 (303)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccchheEEecC--CCcEEeCccccCcccchhhhcc-------cCCCcccccCHHHHh
Confidence 3333322 3367889999999999999999986 8899999999986432111100 001123467777776
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 004234 516 MGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 516 lG~~~~~~D~~~l~~~i~~~l 536 (766)
....++..|++++...+.+++
T Consensus 197 ~~~~~~~~Di~slG~il~ell 217 (303)
T cd05088 197 YSVYTTNSDVWSYGVLLWEIV 217 (303)
T ss_pred ccCCcccccchhhhhHHHHHH
Confidence 666778899999988777665
No 201
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.38 E-value=3.1e-12 Score=133.26 Aligned_cols=190 Identities=19% Similarity=0.174 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|+||+|+. +|+.|++|+..+..... + ..+-.
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~-----~~~~~ 47 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK----------------------------------E-----KKVKY 47 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccc----------------------------------h-----HHHHH
Confidence 5899999999999999 69999999874311000 0 00112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+..|...+.++. ++++ +++++. ...+..+++|||++|++|.+..... ..++...+.....+ ..+..+|.
T Consensus 48 ~~~e~~~~~~l~----~~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 48 VKIEKEVLTRLN----GHPG--IIKLYYTFQDEENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred HHHHHHHHHhcc----cCCC--chhHHHHhcCCceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 233333333221 1121 222221 1235679999999999998865322 23444444333322 33677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHH--------------HHHHHhhcCHHHHHHHHHHcCC
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE--------------AFYGIYEKDADKVLQAMVQMGV 518 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~--------------l~~a~~~~D~~~v~~~l~~lG~ 518 (766)
.|++|+|++|.||+++. ++.++++|||++..+.......... .......+...++.++....+.
T Consensus 121 ~~~~H~dl~~~ni~i~~--~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~ 198 (280)
T cd05581 121 KGIIHRDLKPENILLDK--DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP 198 (280)
T ss_pred CCeeecCCCHHHeEECC--CCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC
Confidence 99999999999999985 8999999999998876543210000 0001112345566777766666
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l 536 (766)
.+...|++++...+..++
T Consensus 199 ~~~~~Di~slG~~l~~l~ 216 (280)
T cd05581 199 AGKSSDLWALGCIIYQML 216 (280)
T ss_pred CChhhhHHHHHHHHHHHH
Confidence 667788888876555443
No 202
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.38 E-value=1.6e-12 Score=145.53 Aligned_cols=183 Identities=16% Similarity=0.176 Sum_probs=132.8
Q ss_pred cccccceeEEEEEeecCe-eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARLKGE-EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 300 PIgsaSiGQVhrA~l~G~-~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
-||+|-||.||.|.++|. +||||.++++.- .+-+|.
T Consensus 213 ~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-------------------------------------------~~~~f~ 249 (468)
T KOG0197|consen 213 ELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-------------------------------------------SPEAFL 249 (468)
T ss_pred HhcCCccceEEEEEEcCCCcccceEEecccc-------------------------------------------ChhHHH
Confidence 589999999999999876 999999977621 123677
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHHHhCCc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQILSHGF 455 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--l~qI~~~Gf 455 (766)
.||+-|.++++ ..-|..-.|. ......+|||||++-++|.++... ....++..++.....+.+ +..+-++++
T Consensus 250 ~Ea~iMk~L~H----~~lV~l~gV~-~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~ 324 (468)
T KOG0197|consen 250 REAQIMKKLRH----EKLVKLYGVC-TKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNY 324 (468)
T ss_pred HHHHHHHhCcc----cCeEEEEEEE-ecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCc
Confidence 89988887753 2222222222 122347999999999999998654 344466677776666655 667779999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
+|||+-..||||++ +..+++.||||++.+.++.... ..-.+--+..-+|+.+..|..+..+|+.+|.-.+.++
T Consensus 325 IHRDLAARNiLV~~--~~~vKIsDFGLAr~~~d~~Y~~-----~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~ 397 (468)
T KOG0197|consen 325 IHRDLAARNILVDE--DLVVKISDFGLARLIGDDEYTA-----SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWEL 397 (468)
T ss_pred cchhhhhhheeecc--CceEEEcccccccccCCCceee-----cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHH
Confidence 99999999999986 8899999999999665543211 0001122455678888888889999999999877766
Q ss_pred HH
Q 004234 536 LN 537 (766)
Q Consensus 536 l~ 537 (766)
+.
T Consensus 398 fT 399 (468)
T KOG0197|consen 398 FT 399 (468)
T ss_pred hc
Confidence 54
No 203
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.38 E-value=1.5e-12 Score=145.56 Aligned_cols=175 Identities=16% Similarity=0.167 Sum_probs=125.9
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+=+|+|+.|.||+|+++++.||||-. .+.-+.|++-|+
T Consensus 130 eWlGSGaQGAVF~Grl~netVAVKKV----~elkETdIKHLR-------------------------------------- 167 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLHNETVAVKKV----RELKETDIKHLR-------------------------------------- 167 (904)
T ss_pred hhhccCcccceeeeeccCceehhHHH----hhhhhhhHHHHH--------------------------------------
Confidence 56899999999999999999999943 333333443333
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 456 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gff 456 (766)
++. +++|.--+-+..-+--.+++||||.-+.|..+.... ..+.+..++... +..-++++|.|.++
T Consensus 168 -------kLk-----H~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKII 234 (904)
T KOG4721|consen 168 -------KLK-----HPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKII 234 (904)
T ss_pred -------hcc-----CcceeeEeeeecCCceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhHh
Confidence 221 122222222211122248999999999999876432 335666666543 44558889999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
|+|+|.-||||.. +..|+|.|||-...+++.- . .+ -+.++...|++++++..-.+.+.|+++|...+-++|
T Consensus 235 HRDLKSPNiLIs~--~d~VKIsDFGTS~e~~~~S-T---kM---SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmL 305 (904)
T KOG4721|consen 235 HRDLKSPNILISY--DDVVKISDFGTSKELSDKS-T---KM---SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEML 305 (904)
T ss_pred hhccCCCceEeec--cceEEeccccchHhhhhhh-h---hh---hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHH
Confidence 9999999999996 7889999999998887641 1 11 135789999999999998899999999998776665
Q ss_pred H
Q 004234 537 N 537 (766)
Q Consensus 537 ~ 537 (766)
.
T Consensus 306 T 306 (904)
T KOG4721|consen 306 T 306 (904)
T ss_pred h
Confidence 3
No 204
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.37 E-value=7.7e-12 Score=131.30 Aligned_cols=182 Identities=15% Similarity=0.161 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.+ +++.||+|+.+...... .-+
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------------------------------------~~~ 48 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEE------------------------------------------LED 48 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHH------------------------------------------HHH
Confidence 4699999999999998 58999999874321110 113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
|..|+..+.++. ++++ .+...+ ......++||||++|+.|.++.......++...+...+.+ ..+..+|..
T Consensus 49 ~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 49 FMVEIDILSECK-----HPNIVGLYEAY-FYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred HHHHHHHHHhCC-----CCceeEEEEEE-ecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445555444432 2322 222222 2345679999999999998875432233444444433332 336778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----CCCCCCCHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----VLVPTGDTTAV 528 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-----~~~~~~D~~~l 528 (766)
|++|+|++|.||+++. ++.++++|||+........... ....+.+.++.+++...+ ..+...|++++
T Consensus 123 ~i~h~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~sl 194 (280)
T cd06611 123 KVIHRDLKAGNILLTL--DGDVKLADFGVSAKNKSTLQKR------DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSL 194 (280)
T ss_pred CcccCCCChhhEEECC--CCCEEEccCccchhhccccccc------ceeecchhhcCHHHHhhcccCCCCCCccccHHHH
Confidence 9999999999999986 8999999999887654332211 012245567777776422 23456899999
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+.+++
T Consensus 195 G~il~~l~ 202 (280)
T cd06611 195 GITLIELA 202 (280)
T ss_pred HHHHHHHH
Confidence 87665544
No 205
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.37 E-value=5.3e-12 Score=130.50 Aligned_cols=184 Identities=15% Similarity=0.077 Sum_probs=119.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|+||.+.. +|+.||+|..+-..... + .-+
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~-------~~~ 44 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSS----------------------------------A-------VED 44 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchH----------------------------------H-------HHH
Confidence 5799999999999998 58999999863111000 0 002
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv--~~~l~qI~~~ 453 (766)
+.+|...+..+ . ++++.-..-..+..+..+++|||++|+++.+..... ....+...+...+. ...+..+|..
T Consensus 45 ~~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 45 SRKEAVLLAKM----K-HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred HHHHHHHHHhC----C-CCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 23343333332 2 233322222223456789999999999988754321 22234443333332 2347889999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++++|||++..+....... ....++..++++++......++..|++++...+.
T Consensus 120 ~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~ 191 (255)
T cd08219 120 RVLHRDIKSKNIFLTQ--NGKVKLGDFGSARLLTSPGAYA------CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILY 191 (255)
T ss_pred CcccCCCCcceEEECC--CCcEEEcccCcceeeccccccc------ccccCCccccCHHHHccCCcCchhhhhhhchhhe
Confidence 9999999999999986 8899999999998775432211 1123556677888877666777889999887666
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 192 ~l~ 194 (255)
T cd08219 192 ELC 194 (255)
T ss_pred ehh
Confidence 554
No 206
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.37 E-value=6.1e-12 Score=130.64 Aligned_cols=182 Identities=15% Similarity=0.147 Sum_probs=120.7
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||+|++|.||+|.. +|+.||+|..+++... .-+|
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-------------------------------------------PEAF 48 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCc-------------------------------------------HHHH
Confidence 5799999999999998 7899999987432111 0134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
.+|...+.++. +..-+.+..++ .....+++|||++|++|.+..... ....+...+...+.+ ..+..+|..|
T Consensus 49 ~~E~~~l~~l~----h~~i~~~~~~~--~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~ 122 (260)
T cd05067 49 LAEANLMKQLQ----HPRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN 122 (260)
T ss_pred HHHHHHHHhcC----CcCeeeEEEEE--ccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 44554444432 21112222222 134579999999999998865322 223444444333322 3368889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||++++ ++.+++.|||++..+....... .........++.+++...+..++..|++++...+.+
T Consensus 123 i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05067 123 YIHRDLRAANILVSE--TLCCKIADFGLARLIEDNEYTA-----REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 195 (260)
T ss_pred eecccccHHhEEEcC--CCCEEEccCcceeecCCCCccc-----ccCCcccccccCHHHhccCCcCcccchHHHHHHHHH
Confidence 999999999999986 8899999999998876322110 011122345777888777777888999999877766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 196 l~ 197 (260)
T cd05067 196 IV 197 (260)
T ss_pred HH
Confidence 54
No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.37 E-value=3.9e-12 Score=132.82 Aligned_cols=187 Identities=16% Similarity=0.191 Sum_probs=119.4
Q ss_pred ccccccceeEEEEEee--cC---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G---~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||+|.+|.||+|++ +| ..||+|..+++.... .
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~ 48 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEK-----------------------------------------Q 48 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHH-----------------------------------------H
Confidence 6799999999999987 23 379999875432111 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~ 451 (766)
.-+|.+|...+.++ .+..-+.+...+ ......+++|||++|++|.++........+...+...+. ...+..+|
T Consensus 49 ~~~~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 123 (267)
T cd05066 49 RRDFLSEASIMGQF----DHPNIIHLEGVV-TKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS 123 (267)
T ss_pred HHHHHHHHHHHHhC----CCCCcceEEEEE-ecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11344455444443 222223333333 334567999999999999987643323345444443332 23467789
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|+||.||+++. ++.++++|||++..+........ .. .-......+++++....+..++..|.+++...
T Consensus 124 ~~~i~h~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~-~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 198 (267)
T cd05066 124 DMGYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEAAY-TT--RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 198 (267)
T ss_pred HCCEeehhhchhcEEECC--CCeEEeCCCCcccccccccceee-ec--CCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence 999999999999999985 88999999999987754321110 00 00011234667777776667778899999877
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 199 l~ell 203 (267)
T cd05066 199 MWEVM 203 (267)
T ss_pred HHHHh
Confidence 66544
No 208
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.37 E-value=6.5e-12 Score=130.58 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=83.2
Q ss_pred eEEEEeecCCCChhhhhhhhh-----cCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecc
Q 004234 410 QILTMEYVPGIKINRIQSLDE-----LGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 482 (766)
Q Consensus 410 ~vLVMEyieG~~L~d~~~l~~-----~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGl 482 (766)
.+++|||+++++|.+...... ..++...+...+.+ ..+..+|..|++|+|++|.||++++ ++.++++|||+
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~ 159 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTVCVADFGL 159 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeEEECCccc
Confidence 589999999999987653221 12333333333322 3367889999999999999999986 78999999999
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 483 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 483 v~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
+..+......... ........+++++....+..+...|++++...+.+++.
T Consensus 160 ~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~ 210 (273)
T cd05035 160 SKKIYSGDYYRQG----RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 210 (273)
T ss_pred eeecccccccccc----ccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence 8876443211000 01112345667777766677788999999987776553
No 209
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.37 E-value=5.6e-12 Score=131.15 Aligned_cols=181 Identities=14% Similarity=0.130 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEeec-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.+|+|++|.||.|... +..||||..+++-.. +-+|
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~-------------------------------------------~~~~ 46 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-------------------------------------------EDEF 46 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCccc-------------------------------------------HHHH
Confidence 57999999999999984 567999976432100 1134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
.+|...+.++ ++++ +++++. ......+++|||++|++|.+.........+...+...+.+ ..+..+|..
T Consensus 47 ~~e~~~l~~l-----~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 47 IEEAKVMMKL-----SHEK--LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred HHHHHHHhcC-----CCCC--eeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4555555443 2232 334443 2234569999999999998865432223455444444333 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||+||+++. ++.++++|||+...+....-... ........++.+++...+......|++++...+.
T Consensus 120 ~i~H~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~~~-----~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~ 192 (256)
T cd05113 120 QFIHRDLAARNCLVDD--QGCVKVSDFGLSRYVLDDEYTSS-----VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMW 192 (256)
T ss_pred CeeccccCcceEEEcC--CCCEEECCCccceecCCCceeec-----CCCccChhhCCHHHHhcCcccchhHHHHHHHHHH
Confidence 9999999999999985 88999999999876643211000 0011234567777777666777889999987766
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 ~l~ 195 (256)
T cd05113 193 EVY 195 (256)
T ss_pred HHh
Confidence 554
No 210
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.37 E-value=6.2e-12 Score=134.34 Aligned_cols=179 Identities=17% Similarity=0.168 Sum_probs=115.5
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.||.|++|+||+|.. +|+.||||+........ .. .+
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~------------------------------------~~------~~ 65 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR------------------------------------RE------LL 65 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEecccch------------------------------------HH------HH
Confidence 699999999999998 58999999873221100 00 12
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
.+|...+..+ . ++++ .+...+ ......+++|||++|.+|.++... ...+...+...+.+ ..+..+|..|
T Consensus 66 ~~e~~~l~~l----~-hp~i~~~~~~~-~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ 137 (297)
T cd06659 66 FNEVVIMRDY----Q-HQNVVEMYKSY-LVGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQG 137 (297)
T ss_pred HHHHHHHHhC----C-CCchhhhhhhe-eeCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2222222221 1 1221 111111 224567999999999999886432 23344444333322 2367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|+||+++. ++.++|+|||++..+....... ....+...++++++...+..+...|++++...+.+
T Consensus 138 ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 209 (297)
T cd06659 138 VIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKDVPKR------KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIE 209 (297)
T ss_pred eecCCCCHHHeEEcc--CCcEEEeechhHhhcccccccc------cceecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 8999999999987665432211 11234566778888776666778899999877766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 210 l~ 211 (297)
T cd06659 210 MV 211 (297)
T ss_pred HH
Confidence 55
No 211
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.37 E-value=8.9e-12 Score=129.22 Aligned_cols=180 Identities=21% Similarity=0.218 Sum_probs=114.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|+|++|+||+|+. +|+.||||+.+...... .. ...+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~--------------------------------~~-------~~~~ 42 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA--------------------------------KN-------QVTN 42 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH--------------------------------HH-------HHHH
Confidence 4799999999999998 58999999873210000 00 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+..|...+. ... +++ .+++++. +.....+++|||++|++|.++.... ...+...+...+.+ ..+..+|.
T Consensus 43 ~~~e~~~~~---~~~-~~~--~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~ 115 (260)
T cd05611 43 VKAERAIMM---IQG-ESP--YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQ 115 (260)
T ss_pred HHHHHHHHh---hcC-CCC--CeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 122211111 111 222 2333332 2235679999999999999875321 22343333333222 33678899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||+++. ++.++|+|||+....... ....++..++.++....+..+...|++++...+
T Consensus 116 ~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il 183 (260)
T cd05611 116 RGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGLEN----------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVI 183 (260)
T ss_pred CCeecCCCCHHHeEECC--CCcEEEeecccceecccc----------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHH
Confidence 99999999999999986 789999999988765431 112345667777777666567778999998777
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 184 ~~l~ 187 (260)
T cd05611 184 FEFL 187 (260)
T ss_pred HHHH
Confidence 6654
No 212
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.37 E-value=9.9e-12 Score=126.58 Aligned_cols=164 Identities=16% Similarity=0.148 Sum_probs=107.6
Q ss_pred ccccccceeEEEEEee-c-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCC--CcccchHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD--GAKRDWVAIYDECA 368 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~--~~~~d~~~i~~E~~ 368 (766)
.+|++|--+-||.|.. + +.+||||+-|....+- +....++.. .+... ..+.+|..++...+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~F--------k~~~~y~~~-~~rf~~~~~k~~~~~~~~~wa 73 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEF--------KNRDKYIKD-DYRFKDRFSKLNPRKIIRMWA 73 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeE--------cChhhhccC-CcccccCcCCCCHHHHHHHHH
Confidence 4789999999999986 3 3799999998765432 111222211 11111 11234554444332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCC---HHHHHHHHHHH
Q 004234 369 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD---RKRLGRYAVES 445 (766)
Q Consensus 369 ~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d---~~~la~~lv~~ 445 (766)
.+|++|+.++++ .++.+|.++. ..+.+|||||+.|..+... .+.....+ ...+...++..
T Consensus 74 ---------~kE~r~L~rl~~-----~Gv~vP~pi~--~~~~~lvME~Ig~~~~~~~-~Lkd~~~~~~~~~~i~~~i~~~ 136 (197)
T cd05146 74 ---------EKEMHNLKRMQK-----AGIPCPEVVV--LKKHVLVMSFIGDDQVPAP-KLKDAKLNDEEMKNAYYQVLSM 136 (197)
T ss_pred ---------HHHHHHHHHHHH-----cCCCCCeEEE--ecCCEEEEEEcCCCCccch-hhhccccCHHHHHHHHHHHHHH
Confidence 468899999876 3588999995 5889999999987533211 01111122 23334444555
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR 491 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r 491 (766)
+..++|..|++|+||+|.||++. +++++|||||.+-..+....
T Consensus 137 l~~l~H~~glVHGDLs~~NIL~~---~~~v~iIDF~qav~~~hp~a 179 (197)
T cd05146 137 MKQLYKECNLVHADLSEYNMLWH---DGKVWFIDVSQSVEPTHPHG 179 (197)
T ss_pred HHHHHHhCCeecCCCCHHHEEEE---CCcEEEEECCCceeCCCCCH
Confidence 55555899999999999999996 57899999999998876543
No 213
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.37 E-value=8.6e-12 Score=131.28 Aligned_cols=182 Identities=16% Similarity=0.161 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|..|++|......... .-+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------------------------------------------~~~ 48 (282)
T cd06643 11 GELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEE------------------------------------------LED 48 (282)
T ss_pred hhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHH------------------------------------------HHH
Confidence 4699999999999999 47889999763221100 012
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
|.+|...+..+ +++++ .+...+ ......+++|||++|+.+.+........++...+...+.+ ..+..+|..
T Consensus 49 ~~~e~~~l~~l-----~h~~ii~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~ 122 (282)
T cd06643 49 YMVEIDILASC-----DHPNIVKLLDAF-YYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN 122 (282)
T ss_pred HHHHHHHHHHC-----CCCCeeeEEEEE-eeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34454444433 22332 222222 2345679999999999998754322233444444443322 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-----cCCCCCCCCHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-----MGVLVPTGDTTAV 528 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-----lG~~~~~~D~~~l 528 (766)
|++|+|++|.||+++. +++++++|||++......... .....++..++++++.. .+..+...|++++
T Consensus 123 ~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~sl 194 (282)
T cd06643 123 KIIHRDLKAGNILFTL--DGDIKLADFGVSAKNTRTIQR------RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 194 (282)
T ss_pred CeeecCCCcccEEEcc--CCCEEEccccccccccccccc------cccccccccccCHhhccccCCCCCCCCccchhhhH
Confidence 9999999999999985 889999999998766432211 01123456678888763 2234456899998
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+.+++
T Consensus 195 Gvil~el~ 202 (282)
T cd06643 195 GITLIEMA 202 (282)
T ss_pred HHHHHHHc
Confidence 87665543
No 214
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.37 E-value=5.6e-12 Score=131.03 Aligned_cols=186 Identities=17% Similarity=0.117 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|+. +|+.|+||.....- .. + ....-+
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-------------------------------~~---~-----~~~~~~ 48 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-------------------------------LM---D-----AKARAD 48 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehh-------------------------------hh---h-----HHHHHH
Confidence 6799999999999997 69999999652100 00 0 001124
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~--~~g~d~~~la~~lv~--~~l~qI 450 (766)
+.+|.+-+..+. + +++ .+...+ ......+++|||++|++|.++... . ...++...+...+.+ ..+..+
T Consensus 49 ~~~e~~~l~~~~----h-~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L 122 (267)
T cd08229 49 CIKEIDLLKQLN----H-PNVIKYYASF-IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM 122 (267)
T ss_pred HHHHHHHHHHcc----C-Cchhhhhhee-EeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 445554444331 2 222 222222 123457899999999999986532 1 112344443333322 336788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|++|.||+++. ++.++++|||++..+...... .....++..+++++.......+...|++++..
T Consensus 123 H~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~ 194 (267)
T cd08229 123 HSRRVMHRDIKPANVFITA--TGVVKLGDLGLGRFFSSKTTA------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGC 194 (267)
T ss_pred HHCCeecCCCCHHHEEEcC--CCCEEECcchhhhccccCCcc------cccccCCcCccCHHHhcCCCccchhhHHHHHH
Confidence 9999999999999999985 889999999998876543211 01123455667777776666677789999988
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 195 il~~l~~ 201 (267)
T cd08229 195 LLYEMAA 201 (267)
T ss_pred HHHHHHh
Confidence 7766543
No 215
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.37 E-value=2.5e-12 Score=137.07 Aligned_cols=180 Identities=15% Similarity=0.161 Sum_probs=115.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|.||+|.. +|+.||||...-.... -.+ .
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------------------------------------~~~------~ 65 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ------------------------------------RRE------L 65 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHH------------------------------------HHH------H
Confidence 4699999999999998 5899999976211000 001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+..+ . ++++ .+...+ ......+++|||++|.++.++... ...+...+.....+ ..+..+|..
T Consensus 66 ~~~e~~~l~~l----~-h~~ii~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~ 137 (292)
T cd06658 66 LFNEVVIMRDY----H-HENVVDMYNSY-LVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQ 137 (292)
T ss_pred HHHHHHHHHhC----C-CCcHHHHHHhe-ecCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22333332222 1 1221 111122 224567999999999999886532 22344444333332 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++|+|||++..+....... ....+...++++++..-...+...|++++...+.
T Consensus 138 ~ivH~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~ 209 (292)
T cd06658 138 GVIHRDIKSDSILLTS--DGRIKLSDFGFCAQVSKEVPKR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVI 209 (292)
T ss_pred CEeecCCCHHHEEEcC--CCCEEEccCcchhhcccccccC------ceeecCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 9999999999999985 7899999999987654432211 0122456677888876666677889999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 210 el~ 212 (292)
T cd06658 210 EMI 212 (292)
T ss_pred HHH
Confidence 654
No 216
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.37 E-value=5e-12 Score=133.12 Aligned_cols=186 Identities=16% Similarity=0.112 Sum_probs=119.2
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||.|++|+||.+.. +|+.||+|+.+......
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 48 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQ----------------------------------------- 48 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChH-----------------------------------------
Confidence 5799999999988653 47899999875432110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLE 448 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~ 448 (766)
.+-.|.+|.+.+.++ +++++ .+...+... ....+++|||++|++|.+... ...++...+...+.+ ..+.
T Consensus 49 ~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~l~~~~~~~i~~~l~~~l~ 121 (283)
T cd05080 49 NTSGWKKEINILKTL-----YHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLP--KHKLNLAQLLLFAQQICEGMA 121 (283)
T ss_pred HHHHHHHHHHHHHhC-----CCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHH--HcCCCHHHHHHHHHHHHHHHH
Confidence 011344455544443 22322 222222121 123689999999999988753 233555555444433 3378
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
.+|..|++|+|++|.||+++. ++.+++.|||++..+.......- . .........++.++....+..++..|++++
T Consensus 122 ~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~--~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~sl 196 (283)
T cd05080 122 YLHSQHYIHRDLAARNVLLDN--DRLVKIGDFGLAKAVPEGHEYYR--V-REDGDSPVFWYAVECLKENKFSYASDVWSF 196 (283)
T ss_pred HHHHCCeeccccChheEEEcC--CCcEEEeecccccccCCcchhhc--c-CCCCCCCceeeCHhHhcccCCCcccccHHH
Confidence 889999999999999999985 78999999999887754322100 0 000112233567777766777888999999
Q ss_pred HHHHHHHHH
Q 004234 529 RRTAQFFLN 537 (766)
Q Consensus 529 ~~~i~~~l~ 537 (766)
...+.+++.
T Consensus 197 G~~l~el~t 205 (283)
T cd05080 197 GVTLYELLT 205 (283)
T ss_pred HHHHHHHHh
Confidence 988777654
No 217
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.37 E-value=7.5e-12 Score=130.53 Aligned_cols=185 Identities=14% Similarity=0.056 Sum_probs=118.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|.||+|++ +++.|++|......... .-+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~------------------------------------------~~~ 51 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRY------------------------------------------VQP 51 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHH------------------------------------------HHH
Confidence 5799999999999998 57899999764321110 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC--CHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV--DRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~--d~~~la~~l--v~~~l~qI~~ 452 (766)
+.+|+..+.++. ++++.-..-+.......+++|||++|.+|.+......... +...+...+ +...+..+|.
T Consensus 52 ~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 126 (268)
T cd06624 52 LHEEIALHSYLK-----HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD 126 (268)
T ss_pred HHHHHHHHHhcC-----CCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 445555554442 2332211112233456799999999999998654322222 333333322 3344778899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCCHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVRR 530 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~--~~~~~D~~~l~~ 530 (766)
.|++|+|++|.||+++. .++.++|+|||++..+...... .....++..++++++...+. .....|++++..
T Consensus 127 ~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGv 199 (268)
T cd06624 127 NQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGINPC------TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGC 199 (268)
T ss_pred CCEeecCCCHHHEEEcC-CCCeEEEecchhheecccCCCc------cccCCCCccccChhhhccccccCCchhhhHHHHH
Confidence 99999999999999974 3678999999998876432211 01123456677777765433 456789999987
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 200 vl~~l~~ 206 (268)
T cd06624 200 TIVEMAT 206 (268)
T ss_pred HHHHHHh
Confidence 7666543
No 218
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.37 E-value=7.4e-12 Score=130.42 Aligned_cols=183 Identities=15% Similarity=0.091 Sum_probs=119.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +++.||+|+...+... .-+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-------------------------------------------~~~ 48 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-------------------------------------------VEE 48 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchH-------------------------------------------HHH
Confidence 6799999999999998 4899999987432100 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|.+-+.++ .+..-+.+...+ ......+++|||++|++|.+..... ....+...+...+.+ ..+..+|..
T Consensus 49 ~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 123 (263)
T cd05052 49 FLKEAAVMKEI----KHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 123 (263)
T ss_pred HHHHHHHHHhC----CCCChhheEEEE-cCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 33444433333 222122222222 3345678999999999999865322 122344433332222 236788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++++|||++..+........ ........+++++....+..++..|++++...+.
T Consensus 124 ~i~H~dlkp~nil~~~--~~~~kl~df~~~~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 196 (263)
T cd05052 124 NFIHRDLAARNCLVGE--NHLVKVADFGLSRLMTGDTYTAH-----AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 196 (263)
T ss_pred CEeecccCcceEEEcC--CCcEEeCCCccccccccceeecc-----CCCCCccccCCHHHhccCCCCchhHHHHHHHHHH
Confidence 9999999999999985 88999999999987754322110 0011234577888877777778889999988776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 197 el~ 199 (263)
T cd05052 197 EIA 199 (263)
T ss_pred HHH
Confidence 655
No 219
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.37 E-value=5e-12 Score=134.90 Aligned_cols=186 Identities=15% Similarity=0.113 Sum_probs=115.8
Q ss_pred ccccccceeEEEEEee---------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL---------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l---------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 369 (766)
.+||.|++|.||+|+. ++..||+|+.+......
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~-------------------------------------- 62 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEK-------------------------------------- 62 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchH--------------------------------------
Confidence 7899999999999974 24579999874332111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCC
Q 004234 370 VLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGV 433 (766)
Q Consensus 370 ~l~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~ 433 (766)
..-++.+|...+..+. +++++ .+...+ ......+++|||++|++|.++..... ..+
T Consensus 63 ---~~~~~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 134 (304)
T cd05101 63 ---DLSDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQM 134 (304)
T ss_pred ---HHHHHHHHHHHHHhhc----cCCCchheeEEE-ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccc
Confidence 0012333444333331 22332 222222 33456789999999999988654221 112
Q ss_pred CHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004234 434 DRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 511 (766)
Q Consensus 434 d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~ 511 (766)
+...+.... +-..+..+|..|++|+|++|.||+++. ++.++|+|||.+..+........ .......+.++++
T Consensus 135 ~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~--~~~~kl~D~g~~~~~~~~~~~~~----~~~~~~~~~y~aP 208 (304)
T cd05101 135 TFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDVNNIDYYKK----TTNGRLPVKWMAP 208 (304)
T ss_pred cHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC--CCcEEECCCccceeccccccccc----ccCCCCCceeeCc
Confidence 222333222 223367889999999999999999985 88999999999987754322110 0001123457778
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 512 AMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 512 ~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+....+..+...|++++...+.+++
T Consensus 209 E~~~~~~~~~~~Di~slG~~l~el~ 233 (304)
T cd05101 209 EALFDRVYTHQSDVWSFGVLMWEIF 233 (304)
T ss_pred hhhccCCCCchhhHHHHHHHHHHHH
Confidence 7776666677789999987666543
No 220
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.36 E-value=5.1e-12 Score=134.31 Aligned_cols=187 Identities=19% Similarity=0.144 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee------------------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004234 299 EPIAAASLGQVHRARL------------------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l------------------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~ 360 (766)
+.||.|++|.||+|.. ++..||||+.+......
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~----------------------------- 61 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKN----------------------------- 61 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHH-----------------------------
Confidence 5799999999999853 13468899875432111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc---------
Q 004234 361 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL--------- 431 (766)
Q Consensus 361 ~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~--------- 431 (766)
..-+|.+|++.+..+. ++++.-..-+.......+++|||++|++|.++......
T Consensus 62 ------------~~~~~~~E~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~ 124 (296)
T cd05095 62 ------------ARNDFLKEIKIMSRLK-----DPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADV 124 (296)
T ss_pred ------------HHHHHHHHHHHHHhCC-----CCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccc
Confidence 0124555655555442 23322111122334567999999999999886532111
Q ss_pred -CCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHH
Q 004234 432 -GVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADK 508 (766)
Q Consensus 432 -g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~ 508 (766)
..+...+...+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++..+........ .+.......+
T Consensus 125 ~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~ 198 (296)
T cd05095 125 VTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK--NYTIKIADFGMSRNLYSGDYYRI----QGRAVLPIRW 198 (296)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcC--CCCEEeccCcccccccCCcceec----cCcCcCcccc
Confidence 1222233333322 3468899999999999999999985 88999999999887643321100 0111113445
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 509 VLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 509 v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
++++....+..+...|++++...+.+++.
T Consensus 199 ~~pe~~~~~~~~~~~DiwSlG~~l~el~~ 227 (296)
T cd05095 199 MSWESILLGKFTTASDVWAFGVTLWEILT 227 (296)
T ss_pred CCHHHHhcCCccchhhhhHHHHHHHHHHH
Confidence 66766666777888999999988777664
No 221
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.36 E-value=3e-12 Score=131.28 Aligned_cols=137 Identities=20% Similarity=0.287 Sum_probs=96.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.+||+||||-+|.|.. +|++||||+-...+... .
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp--------------------------------------------q 56 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP--------------------------------------------Q 56 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCCCc--------------------------------------------c
Confidence 6899999999999998 79999999875443321 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCC--CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH---HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES---YLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st--~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~---~l~qI~ 451 (766)
+..|++--..+ + ..+-+|.+.+-.+. -.|||||.+ |.+|.++.......++.+.+. .+++. -++.+|
T Consensus 57 L~yEskvY~iL----~--~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvL-MLaDQml~RiEyvH 128 (341)
T KOG1163|consen 57 LLYESKVYRIL----Q--GGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVL-MLADQMLSRIEYVH 128 (341)
T ss_pred hhHHHHHHHHh----c--cCCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHH-HHHHHHHHHHHHHH
Confidence 22344433322 2 35678888875443 459999987 889999877665555544332 12222 267789
Q ss_pred hCCccccCCCCCcEEEee-cCCCcEEEEeecceeccC
Q 004234 452 SHGFFHADPHPGNIAVDD-VNGGRLIFYDFGMMGSIS 487 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~-~~~g~l~LiDFGlv~~L~ 487 (766)
.++|+|+|+||.|+|..- ..-.++.+||||+++.+-
T Consensus 129 ~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~ 165 (341)
T KOG1163|consen 129 LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR 165 (341)
T ss_pred hhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence 999999999999999852 123589999999998763
No 222
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.36 E-value=9.3e-12 Score=133.53 Aligned_cols=182 Identities=16% Similarity=0.169 Sum_probs=118.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|..||+|..+...... ... +
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~------~ 45 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPA-----------------------------------IRN------Q 45 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHH-----------------------------------HHH------H
Confidence 5799999999999998 58899999874332111 111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-C
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS-H 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~-~ 453 (766)
+.+|++.+.++ .+..-+.+...+. .....+++|||++|++|.++.... ..++...+..... -..+..+|. +
T Consensus 46 ~~~E~~~l~~l----~h~~iv~~~~~~~-~~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 46 IIRELKVLHEC----NSPYIVGFYGAFY-SDGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred HHHHHHHHHhC----CCCCCCeEEEEEe-eCCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 33444444443 2222233333332 346779999999999999875322 2233332222222 223566776 6
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++++|||+++.+...... ...+...+++++.......+...|++++...+.
T Consensus 120 ~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~ 189 (308)
T cd06615 120 KIMHRDVKPSNILVNS--RGEIKLCDFGVSGQLIDSMAN--------SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLV 189 (308)
T ss_pred CEEECCCChHHEEEec--CCcEEEccCCCcccccccccc--------cCCCCcCccChhHhcCCCCCccchHHHHHHHHH
Confidence 9999999999999986 889999999998766443211 123455677777776666677889999988776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 190 ~l~~ 193 (308)
T cd06615 190 EMAI 193 (308)
T ss_pred HHHh
Confidence 6653
No 223
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.36 E-value=2.7e-12 Score=141.19 Aligned_cols=176 Identities=11% Similarity=0.047 Sum_probs=113.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +++.||+|+...+..
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~----------------------------------------------- 104 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTT----------------------------------------------- 104 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcccc-----------------------------------------------
Confidence 6899999999999999 478999997532210
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
..|+..+.++ .+..-+.+...+ ......++||||+.| .+.++.......++...+...+. ...+..+|..|
T Consensus 105 -~~E~~~l~~l----~h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 105 -LIEAMLLQNV----NHPSVIRMKDTL-VSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred -HHHHHHHHhC----CCCCCcChhheE-EeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 1122222222 121112222222 224557899999976 45554322223344444433332 23478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|+||.||+++. ++.++|+|||++......... . -..++..++++++...+......|++++...+.+
T Consensus 178 ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~------~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~e 248 (357)
T PHA03209 178 IIHRDVKTENIFIND--VDQVCIGDLGAAQFPVVAPAF------L-GLAGTVETNAPEVLARDKYNSKADIWSAGIVLFE 248 (357)
T ss_pred eecCCCCHHHEEECC--CCCEEEecCccccccccCccc------c-cccccccccCCeecCCCCCCchhhHHHHHHHHHH
Confidence 999999999999986 889999999998753322110 0 1235677788888776667788899999988777
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 249 ll~ 251 (357)
T PHA03209 249 MLA 251 (357)
T ss_pred HHH
Confidence 653
No 224
>PTZ00284 protein kinase; Provisional
Probab=99.36 E-value=2.7e-12 Score=146.41 Aligned_cols=185 Identities=15% Similarity=0.103 Sum_probs=114.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|+||.||+|+. .|+.||||+.+... ........|+.
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-------------------------------------~~~~~~~~e~~ 177 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-------------------------------------KYTRDAKIEIQ 177 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecch-------------------------------------hhHHHHHHHHH
Confidence 5799999999999998 58999999873210 00111223444
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh-C
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS-H 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~-~ 453 (766)
+..+.+.... ......+.+...+..-....++|||++ |..+.++.. ....+....+...+.+ ..+..+|. .
T Consensus 178 ~l~~l~~~~~----~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~-~~~~l~~~~~~~i~~qi~~aL~yLH~~~ 251 (467)
T PTZ00284 178 FMEKVRQADP----ADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIM-KHGPFSHRHLAQIIFQTGVALDYFHTEL 251 (467)
T ss_pred HHHHHhhcCc----ccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHH-HcCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 4333322111 001112223333333334578999988 555655432 1223444444433333 34778887 5
Q ss_pred CccccCCCCCcEEEeecCCC----------------cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC
Q 004234 454 GFFHADPHPGNIAVDDVNGG----------------RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG 517 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g----------------~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG 517 (766)
|++|+|+||+|||++. ++ .++|+|||.+....... ....+...+++++++..+
T Consensus 252 gIiHrDlKP~NILl~~--~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~---------~~~~gt~~Y~APE~~~~~ 320 (467)
T PTZ00284 252 HLMHTDLKPENILMET--SDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR---------TAIVSTRHYRSPEVVLGL 320 (467)
T ss_pred CeecCCCCHHHEEEec--CCcccccccccccCCCCceEEECCCCccccCcccc---------ccccCCccccCcHHhhcC
Confidence 9999999999999975 32 59999999875433221 112456788899988766
Q ss_pred CCCCCCCHHHHHHHHHHHHH
Q 004234 518 VLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 518 ~~~~~~D~~~l~~~i~~~l~ 537 (766)
......|++++...+.+++.
T Consensus 321 ~~~~~~DiwSlGvil~ellt 340 (467)
T PTZ00284 321 GWMYSTDMWSMGCIIYELYT 340 (467)
T ss_pred CCCcHHHHHHHHHHHHHHHh
Confidence 66777899999988777653
No 225
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.36 E-value=6.6e-12 Score=130.05 Aligned_cols=182 Identities=15% Similarity=0.141 Sum_probs=121.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||.|++|.||+|.. +|+.||+|+........ . ...-+
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------~----------~~~~~ 46 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-----------------------------K----------GSVRN 46 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-----------------------------h----------hHHHH
Confidence 6899999999999999 49999999874211000 0 00112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+.+|.+.+.++. ++++ +.++. +-....+++|||++|.+|.+..... ...+...+...+.+ ..+..+|.
T Consensus 47 ~~~e~~~l~~l~-----h~~i--~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~ 118 (258)
T cd05578 47 VLNERRILQELN-----HPFL--VNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHS 118 (258)
T ss_pred HHHHHHHHHhCC-----CCCh--HHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHh
Confidence 333444333331 1221 22211 2245679999999999999865432 23454444443333 23678899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||+++. ++.++++|||.+..+..... .....++..++.++.......+...|++++...+
T Consensus 119 ~~i~h~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 119 KGIIHRDIKPDNILLDE--QGHVHITDFNIATKVTPDTL-------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred CCeeccCCCHHHeEEcC--CCCEEEeecccccccCCCcc-------ccccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 99999999999999986 88999999999887765431 1123456678888887766677889999998777
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 190 ~~l~ 193 (258)
T cd05578 190 YECL 193 (258)
T ss_pred HHHH
Confidence 6655
No 226
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.36 E-value=5.2e-12 Score=133.24 Aligned_cols=119 Identities=13% Similarity=0.035 Sum_probs=79.2
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecC-----CCcEEEEe
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVN-----GGRLIFYD 479 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~-----~g~l~LiD 479 (766)
.+..+|||||++|++|.++.......++.......+.+ ..+..+|..|++|+|+||.||+++... .+.+++.|
T Consensus 88 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d 167 (274)
T cd05076 88 GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD 167 (274)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence 45679999999999998875433333444444333322 346888999999999999999997411 12489999
Q ss_pred ecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHHHH
Q 004234 480 FGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 480 FGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~~~ 535 (766)
||.......... ..++..+++++.... ...++..|++++...+.++
T Consensus 168 ~g~~~~~~~~~~----------~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 168 PGVSFTALSREE----------RVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred Cccccccccccc----------cccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 998754432211 123445667776543 3456778999998766554
No 227
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.36 E-value=5.5e-12 Score=131.47 Aligned_cols=188 Identities=14% Similarity=0.154 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEee--cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~--~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.||+|++|.||+|++ .++ .||||..+...... . .-
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~---------------------------------~-------~~ 44 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTR---------------------------------S-------EM 44 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCH---------------------------------H-------HH
Confidence 4689999999999998 243 69999874432111 0 00
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhh-----cCCCHHHHHHHHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDE-----LGVDRKRLGRYAVE 444 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~-----~g~d~~~la~~lv~ 444 (766)
-+|..|...+..+. +..-+.+..... ......+++|||++|++|.+...... ..++...+...+.+
T Consensus 45 ~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (272)
T cd05075 45 EDFLSEAVCMKEFD----HPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTD 120 (272)
T ss_pred HHHHHHHHHHHhCC----CCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHH
Confidence 13445555555442 211122221111 11234689999999999987643221 11333333333322
Q ss_pred --HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004234 445 --SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 522 (766)
Q Consensus 445 --~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~ 522 (766)
..+..+|..|++|+|+||.||+++. ++.++++|||++..+........ -......+.+++++....+..++.
T Consensus 121 i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~ 194 (272)
T cd05075 121 IASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCVADFGLSKKIYNGDYYRQ----GRIAKMPVKWIAIESLADRVYTTK 194 (272)
T ss_pred HHHHHHHHHHCCeeccccchhheEEcC--CCCEEECCCCcccccCcccceec----CCcccCCcccCCHHHccCCCcChH
Confidence 3468889999999999999999985 88999999999987754321000 011223456777777776667788
Q ss_pred CCHHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFFL 536 (766)
Q Consensus 523 ~D~~~l~~~i~~~l 536 (766)
.|++++...+.+++
T Consensus 195 ~Di~slG~il~el~ 208 (272)
T cd05075 195 SDVWSFGVTMWEIA 208 (272)
T ss_pred HHHHHHHHHHHHHH
Confidence 89999987766554
No 228
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.36 E-value=7e-12 Score=145.83 Aligned_cols=143 Identities=20% Similarity=0.222 Sum_probs=103.2
Q ss_pred CcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+.||.|++|.||+|.+.++.+++|+..+..... . ++...+ ..-.
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~-----------------------------~----~~~~~~-~~~~ 382 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRH-----------------------------P----ELDERL-RTER 382 (535)
T ss_pred ccceeccCCcEEEEEEeecCccceeEEEecccccc-----------------------------h----hHHHHH-HHHH
Confidence 35789999999999999988788888764321111 0 000001 1224
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcc
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFF 456 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~Gff 456 (766)
+.+|++.+..++ .+++.+|.++.......+|||||++|.+|.+... ....++..++ ..+.++|..|++
T Consensus 383 ~~~E~~~l~~l~-----~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~------~~~~~~~~i~-~~L~~lH~~gii 450 (535)
T PRK09605 383 TRAEARLLSEAR-----RAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE------GNPELVRKVG-EIVAKLHKAGIV 450 (535)
T ss_pred HHHHHHHHHhhc-----ccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH------HHHHHHHHHH-HHHHHHHhCCCc
Confidence 667888877774 3557778888766678899999999999988643 1233444433 457889999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
|+|+||+||++. +++++++|||+++..++
T Consensus 451 HrDlkp~NILl~---~~~~~liDFGla~~~~~ 479 (535)
T PRK09605 451 HGDLTTSNFIVR---DDRLYLIDFGLGKYSDL 479 (535)
T ss_pred cCCCChHHEEEE---CCcEEEEeCcccccCCc
Confidence 999999999994 68899999999988654
No 229
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.36 E-value=5e-12 Score=133.04 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=117.0
Q ss_pred ccccccceeEEEEEee------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||+|++|.||+|.. +|+.||||..+......
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------------- 48 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEH----------------------------------------- 48 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHH-----------------------------------------
Confidence 5799999999999984 37899999874321110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccC-CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLE 448 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~s-t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~ 448 (766)
.-+|.+|.+.+.++ . ++++ .+..+..... ...+++|||++|++|.++........+...+.....+ ..+.
T Consensus 49 -~~~~~~e~~~l~~l----~-h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~ 122 (284)
T cd05081 49 -LRDFEREIEILKSL----Q-HDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGME 122 (284)
T ss_pred -HHHHHHHHHHHHhC----C-CCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHH
Confidence 01234444444443 2 2322 1111111111 3468999999999999875432223444443333322 3477
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
.+|..|++|+|++|.||+++. +++++|+|||++..+......... .........+++++....+..+...|++++
T Consensus 123 ~LH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 197 (284)
T cd05081 123 YLGSKRYVHRDLATRNILVES--ENRVKIGDFGLTKVLPQDKEYYKV---REPGESPIFWYAPESLTESKFSVASDVWSF 197 (284)
T ss_pred HHHHCCceeccCCHhhEEECC--CCeEEECCCcccccccCCCcceee---cCCCCCceEeeCHHHhccCCcChHHHHHHH
Confidence 889999999999999999985 889999999999877543211000 000011223566777666666777899999
Q ss_pred HHHHHHHHH
Q 004234 529 RRTAQFFLN 537 (766)
Q Consensus 529 ~~~i~~~l~ 537 (766)
...+.+++.
T Consensus 198 G~~l~el~~ 206 (284)
T cd05081 198 GVVLYELFT 206 (284)
T ss_pred HHHHHHHhh
Confidence 887776653
No 230
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.36 E-value=7.8e-12 Score=131.42 Aligned_cols=186 Identities=16% Similarity=0.114 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
++||.|++|.||+|.+. +..|++|........
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~----------------------------------------- 50 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE----------------------------------------- 50 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH-----------------------------------------
Confidence 68999999999999983 367888866322111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhhc------CCCHHHHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDEL------GVDRKRLGRYAV 443 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~~------g~d~~~la~~lv 443 (766)
..+.+|.+|...+.++. ++++ .+.+ .......+++|||++|++|.++...... .++...+...+.
T Consensus 51 ~~~~~~~~e~~~l~~l~-----~~~i--~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05036 51 QDESDFLMEALIMSKFN-----HQNI--VRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123 (277)
T ss_pred HHHHHHHHHHHHHHhCC-----CCCE--eeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 12335666665555442 2222 2233 2233567999999999999986532221 234444433333
Q ss_pred H--HHHHHHHhCCccccCCCCCcEEEeecC-CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004234 444 E--SYLEQILSHGFFHADPHPGNIAVDDVN-GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 520 (766)
Q Consensus 444 ~--~~l~qI~~~GffHaDpHPGNILV~~~~-~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~ 520 (766)
+ ..+..+|..|++|+|++|.||+++... +..++++|||++..+....-... .+.......+++++....+..+
T Consensus 124 qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~ 199 (277)
T cd05036 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRK----GGRAMLPIKWMPPEAFLDGIFT 199 (277)
T ss_pred HHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceec----CCCCCccHhhCCHHHHhcCCcC
Confidence 2 336788999999999999999998521 23589999999987743211000 0001123467788888777788
Q ss_pred CCCCHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFL 536 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l 536 (766)
...|++++...+.+++
T Consensus 200 ~~~DiwslG~il~el~ 215 (277)
T cd05036 200 SKTDVWSFGVLLWEIF 215 (277)
T ss_pred chhHHHHHHHHHHHHH
Confidence 8899999988776654
No 231
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.35 E-value=7.4e-12 Score=131.25 Aligned_cols=184 Identities=18% Similarity=0.181 Sum_probs=115.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|+|++|+||+|++ +|+.||+|+........ .. +-.
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~------~~~ 46 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP----------------------------------VI------KKI 46 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCc----------------------------------cc------cHH
Confidence 5689999999999999 58999999873221000 00 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|+..+..+ .+..-+.+...+ ......+++|||++|..+..+... ...++...+...+.+ ..+..+|..|
T Consensus 47 ~~~e~~~l~~~----~h~~i~~~~~~~-~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 47 ALREIRMLKQL----KHPNLVNLIEVF-RRKRKLHLVFEYCDHTVLNELEKN-PRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred HHHHHHHHHhC----CCCCEeeeeeEE-eeCCEEEEEEeccCccHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33444444433 222222222333 334567999999999888776432 223444444444333 2367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||+++. ++.++++|||++..+....... ....+...+++++.... ...+...|++++...+.
T Consensus 121 i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~ 192 (286)
T cd07847 121 CIHRDVKPENILITK--QGQIKLCDFGFARILTGPGDDY------TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA 192 (286)
T ss_pred ceecCCChhhEEEcC--CCcEEECccccceecCCCcccc------cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence 999999999999985 7899999999999876543210 00112334555666543 23456789999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 ~l~ 195 (286)
T cd07847 193 ELL 195 (286)
T ss_pred HHH
Confidence 654
No 232
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.35 E-value=1.2e-11 Score=129.10 Aligned_cols=183 Identities=16% Similarity=0.105 Sum_probs=109.3
Q ss_pred cccccceeEEEEEee-c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL-K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 300 PIgsaSiGQVhrA~l-~---G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.||.|+||+||+|.. + ...|++|..+...... .+.
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------------~~~ 40 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPD-----------------------------------------EQL 40 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChH-----------------------------------------HHH
Confidence 489999999999986 3 4578888653321110 112
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcC----CCHHHHHHHH--HHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELG----VDRKRLGRYA--VESYL 447 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g----~d~~~la~~l--v~~~l 447 (766)
.|.+|+..+..+ ++++| .+.+. ......+|+|||++|++|.++....... .+...+.... +-..+
T Consensus 41 ~~~~e~~~~~~l-----~h~ni--i~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l 113 (269)
T cd05042 41 LFLQEVQPYREL-----NHPNV--LQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGL 113 (269)
T ss_pred HHHHHHHHHHhC-----CCCCc--ceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHH
Confidence 344555444333 22332 22222 2345689999999999999865322111 1222222222 22346
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-------CCCC
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-------GVLV 520 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-------G~~~ 520 (766)
..+|..|++|+|+||.||+++. ++.++++|||++........... .........++++++... ...+
T Consensus 114 ~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 187 (269)
T cd05042 114 LWLHQADFIHSDLALRNCQLTA--DLSVKIGDYGLALEQYPEDYYIT----KDCHAVPLRWLAPELVEIRGQDLLPKDQT 187 (269)
T ss_pred HHHHhcCEecccccHhheEecC--CCcEEEeccccccccccchheec----cCCCCCcccccCHHHHhhccccccccccc
Confidence 7889999999999999999986 88999999999865433211000 000112344667776643 1234
Q ss_pred CCCCHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFL 536 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l 536 (766)
...|++++.-.+.+++
T Consensus 188 ~~~DiwslG~~l~el~ 203 (269)
T cd05042 188 KKSNIWSLGVTMWELF 203 (269)
T ss_pred hhhHHHHHHHHHHHHH
Confidence 5678998887666554
No 233
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.35 E-value=5.3e-12 Score=131.98 Aligned_cols=186 Identities=17% Similarity=0.175 Sum_probs=119.3
Q ss_pred ccccccceeEEEEEeec------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||.|++|.||+|+++ |+.||||+.++.... .
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-----------------------------------------~ 48 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-----------------------------------------Q 48 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-----------------------------------------H
Confidence 67999999999999972 689999988543221 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeee--cc--CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SY 446 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~--st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~ 446 (766)
.+-+|.+|.+.+..+. +++ +++.+. .. ....+++|||++|++|.++........+...+...+.+ ..
T Consensus 49 ~~~~~~~ei~~l~~l~-----~~~--i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~a 121 (284)
T cd05038 49 HRSDFEREIEILRTLD-----HEN--IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKG 121 (284)
T ss_pred HHHHHHHHHHHHHhCC-----CCC--hheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHH
Confidence 1123444444443331 222 223221 22 23579999999999999876433323454444433322 23
Q ss_pred HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHH
Q 004234 447 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 526 (766)
Q Consensus 447 l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~ 526 (766)
+..+|..|++|+|++|.||+++. ++.++|.|||++..+......... .........++.++....+..+...|++
T Consensus 122 L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~Di~ 196 (284)
T cd05038 122 MDYLGSQRYIHRDLAARNILVES--EDLVKISDFGLAKVLPEDKDYYYV---KEPGESPIFWYAPECLRTSKFSSASDVW 196 (284)
T ss_pred HHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccccccccccCCcceec---cCCCCCcccccCcHHHccCCCCcccchH
Confidence 67789999999999999999986 799999999999988643221000 0001122335566666666667788999
Q ss_pred HHHHHHHHHHH
Q 004234 527 AVRRTAQFFLN 537 (766)
Q Consensus 527 ~l~~~i~~~l~ 537 (766)
++...+.+++.
T Consensus 197 slG~~l~el~t 207 (284)
T cd05038 197 SFGVTLYELFT 207 (284)
T ss_pred HHhhhhheeec
Confidence 99877766653
No 234
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.35 E-value=1.3e-11 Score=127.11 Aligned_cols=187 Identities=18% Similarity=0.106 Sum_probs=116.3
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.+.||+|++|+||+|+. +|+.|++|+....-.... ..+..+.+.
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-------------------------------~~~~~~~~~--- 50 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQT-------------------------------GQEAVKQLE--- 50 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEcccccc-------------------------------chHHHHHHH---
Confidence 36899999999999998 589999998743211110 011111222
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
+|..-+..+ .+..-+.+... .......+++|||++|.+|.++.... ...+...+...+ +-..+..+|..
T Consensus 51 ---~e~~~l~~~----~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~ 121 (258)
T cd06632 51 ---QEIALLSKL----QHPNIVQYLGT-EREEDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDR 121 (258)
T ss_pred ---HHHHHHHhc----CCCCchheeee-EecCCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 233222222 12111222222 22335679999999999998875322 123433332222 22346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~-~~~~~D~~~l~~~i 532 (766)
|++|+|++|+||+++. ++.++|+|||+...+..... .....++..++.++....+. .+...|++++...+
T Consensus 122 ~i~H~dl~~~ni~~~~--~~~~kl~d~~~~~~~~~~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l 192 (258)
T cd06632 122 NTVHRDIKGANILVDT--NGVVKLADFGMAKQVVEFSF-------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTV 192 (258)
T ss_pred CcccCCCCHHHEEECC--CCCEEEccCccceecccccc-------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHH
Confidence 9999999999999985 88999999999887654331 11123455567777765544 56678999988766
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 193 ~~l~ 196 (258)
T cd06632 193 LEMA 196 (258)
T ss_pred HHHH
Confidence 6554
No 235
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.35 E-value=1.1e-11 Score=128.08 Aligned_cols=183 Identities=19% Similarity=0.169 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|.|++|.||+|.. +++.+++|+........ .. .
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------------~~------~ 46 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDD------------------------------------FE------I 46 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhh------------------------------------HH------H
Confidence 6899999999999998 58899999884321110 01 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++ . ++++ .+...+ ......+++|||++|..|.++.......++...+...+.+ ..+..+|..
T Consensus 47 ~~~e~~~l~~~----~-h~~i~~~~~~~-~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 47 IQQEISMLKEC----R-HPNIVAYFGSY-LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred HHHHHHHHHhC----C-CCChhceEEEE-EeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22333333333 1 2222 222222 3345679999999999999875433234555544433332 236778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC---CCCCCCCHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG---VLVPTGDTTAVRR 530 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG---~~~~~~D~~~l~~ 530 (766)
|++|+|++|.||+++. ++.++++|||++..+....... ....++..++++++.... ..+...|++++..
T Consensus 121 ~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~ 192 (262)
T cd06613 121 GKIHRDIKGANILLTE--DGDVKLADFGVSAQLTATIAKR------KSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGI 192 (262)
T ss_pred CceecCCChhhEEECC--CCCEEECccccchhhhhhhhcc------ccccCCccccCchhhcccccCCcCchhhhHHHHH
Confidence 9999999999999986 8899999999988765432110 011234556777776654 5566789999887
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 193 ~l~~~~t 199 (262)
T cd06613 193 TAIELAE 199 (262)
T ss_pred HHHHHHh
Confidence 7666543
No 236
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.35 E-value=1e-11 Score=131.04 Aligned_cols=181 Identities=19% Similarity=0.233 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.||+|+...+.... ... +
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~------~ 49 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSS-----------------------------------VRK------Q 49 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcch-----------------------------------HHH------H
Confidence 5799999999999998 49999999874332111 111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHh-C
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILS-H 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~-~ 453 (766)
+.+|...+..+ +++++.-..-+.......+|||||++|++|.++.... ..++...+..... ...+..+|. +
T Consensus 50 ~~~E~~~l~~l-----~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~ 123 (284)
T cd06620 50 ILRELQIMHEC-----RSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVH 123 (284)
T ss_pred HHHHHHHHHHc-----CCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 33444444333 2233333333333456789999999999998864321 1233333322222 223566775 7
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ ++.++++|||++..+...... ...+...+++++....+..+...|++++...+.
T Consensus 124 ~i~H~dl~p~nil~~~--~~~~~l~d~gl~~~~~~~~~~--------~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 193 (284)
T cd06620 124 RIMHRDIKPSNILVNS--RGQIKLCDFGVSGELINSIAD--------TFVGTSTYMSPERIQGGKYTVKSDVWSLGISII 193 (284)
T ss_pred CeeccCCCHHHEEECC--CCcEEEccCCcccchhhhccC--------ccccCcccCCHHHHccCCCCccchHHHHHHHHH
Confidence 9999999999999985 889999999998765332211 123456677788776676777889999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 194 ~l~ 196 (284)
T cd06620 194 ELA 196 (284)
T ss_pred HHH
Confidence 655
No 237
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.35 E-value=9e-12 Score=130.99 Aligned_cols=186 Identities=13% Similarity=0.140 Sum_probs=116.9
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|.||+|+.. ++.||||+.+...... ...
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~-- 53 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGP-----------------------------------LRE-- 53 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHH-----------------------------------HHH--
Confidence 46899999999999872 4789999874322110 111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRK 436 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~~ 436 (766)
.|..|...+.. +.+..-+.+.... ......++++||+++..+.++..... ...+..
T Consensus 54 ----~~~~e~~~~~~----l~h~~iv~~~~~~-~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (283)
T cd05091 54 ----EFKHEAMMRSR----LQHPNIVCLLGVV-TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPA 124 (283)
T ss_pred ----HHHHHHHHHhc----CCCCCcCeEEEEE-cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHH
Confidence 12233332222 2222212222222 22356789999999999988653221 112233
Q ss_pred HHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004234 437 RLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 514 (766)
Q Consensus 437 ~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~ 514 (766)
.+...+.+ ..+..+|..|++|+|+||.||++.+ ++.++++|||++..+........ .+.....+.+++++..
T Consensus 125 ~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~kl~Dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~ 198 (283)
T cd05091 125 DFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD--KLNVKISDLGLFREVYAADYYKL----MGNSLLPIRWMSPEAI 198 (283)
T ss_pred HHHHHHHHHHHHHHHHHHcCccccccchhheEecC--CCceEecccccccccccchheee----ccCccCCccccCHHHH
Confidence 33222222 3367889999999999999999985 78999999999887754322110 0111224568888888
Q ss_pred HcCCCCCCCCHHHHHHHHHHHH
Q 004234 515 QMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 515 ~lG~~~~~~D~~~l~~~i~~~l 536 (766)
..+..++..|++++...+.+++
T Consensus 199 ~~~~~~~~~Dv~slG~~l~el~ 220 (283)
T cd05091 199 MYGKFSIDSDIWSYGVVLWEVF 220 (283)
T ss_pred hcCCCCcchhHHHHHHHHHHHH
Confidence 7788888899999988776654
No 238
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.35 E-value=5.2e-12 Score=134.55 Aligned_cols=182 Identities=13% Similarity=0.083 Sum_probs=111.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|.||+|+. +|+.||+|..+....... ..+
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~-----------------------------------------~~~ 50 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA-----------------------------------------PCT 50 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc-----------------------------------------hhH
Confidence 6899999999999998 589999998743321110 001
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++ .+ +++ .+..++ ......+++|||++| ++.+.........+...+...+.+ ..+..+|..
T Consensus 51 ~~~E~~~l~~l----~h-~nI~~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (301)
T cd07873 51 AIREVSLLKDL----KH-ANIVTLHDII-HTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123 (301)
T ss_pred HHHHHHHHHhc----CC-CCcceEEEEE-ecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22344434333 22 322 222222 234567999999986 565543322233444444433322 347788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|+||+||+++. ++.++++|||++..........- .......+++++.... ...+...|++++...+
T Consensus 124 ~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l 195 (301)
T cd07873 124 KVLHRDLKPQNLLINE--RGELKLADFGLARAKSIPTKTYS------NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 195 (301)
T ss_pred CeeCCCCCHHHEEECC--CCcEEECcCcchhccCCCCCccc------ccceeecccCcHHHhCCCCCccHHHHHHHHHHH
Confidence 9999999999999986 88999999999876543221100 0112345666665543 2244567899988776
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 196 ~el~ 199 (301)
T cd07873 196 YEMS 199 (301)
T ss_pred HHHH
Confidence 6654
No 239
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.35 E-value=1.5e-11 Score=125.60 Aligned_cols=187 Identities=17% Similarity=0.092 Sum_probs=123.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||.|++|.||+|.. +|+.|++|+.+..... ... .-.
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~------~~~ 45 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS----------------------------------EEE------LEA 45 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccc----------------------------------hHH------HHH
Confidence 6899999999999999 4999999987433211 000 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+.+|...+.++. ++++.-+.-..... ...+++|||++|.+|.++..... .++...+...+.+ ..+..+|.
T Consensus 46 ~~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~ 119 (260)
T cd06606 46 LEREIRILSSLQ-----HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHS 119 (260)
T ss_pred HHHHHHHHHHcC-----CCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 233333344332 23332222222223 56799999999999998754322 3444444433322 23677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||++++ ++.++|+|||............ ......++..++.++....+..+...|++++...+
T Consensus 120 ~~~~h~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 193 (260)
T cd06606 120 NGIVHRDIKGANILVDS--DGVVKLADFGCAKRLGDIETGE----GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTV 193 (260)
T ss_pred CCccccCCCHHHEEEcC--CCCEEEcccccEEecccccccc----cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHH
Confidence 99999999999999986 8899999999999887654210 01123456677788888777677788999998877
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 194 ~~l~~ 198 (260)
T cd06606 194 IEMAT 198 (260)
T ss_pred HHHHh
Confidence 66654
No 240
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.35 E-value=1.2e-11 Score=127.37 Aligned_cols=127 Identities=24% Similarity=0.204 Sum_probs=84.2
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
....+++|||++|++|.++..... ..+...+...+.+ ..+..+|..|++|+|++|.||++++ ++.++++|||++.
T Consensus 65 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~ 141 (265)
T cd05579 65 KKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSK 141 (265)
T ss_pred CcEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccch
Confidence 345699999999999988653221 3344443333222 2367889999999999999999986 8899999999887
Q ss_pred ccChhhHHH--HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 485 SISPNIREG--LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 485 ~L~~~~r~~--l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
......... ..........++..++.++....+..+...|++++...+.+++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~ 195 (265)
T cd05579 142 VGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFL 195 (265)
T ss_pred hcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHH
Confidence 543321100 0000011123456677787776666677789999987766654
No 241
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.35 E-value=8.2e-12 Score=131.26 Aligned_cols=182 Identities=17% Similarity=0.119 Sum_probs=117.7
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||+|++|.||+|.. +|+.|++|+........ -..+-.+.
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~---------------------------------------~~~~~~~~ 41 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK---------------------------------------RKGEQMAL 41 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh---------------------------------------hhhhHHHH
Confidence 68999999999987 59999999874321000 00122344
Q ss_pred HHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 379 QEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
.|...+.++. ++++ .+..++ +.....+++|||++|++|.+...... ..++...+...+ +-..+..+|..|
T Consensus 42 ~e~~~l~~l~-----~~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~ 115 (277)
T cd05577 42 NEKKILEKVS-----SRFIVSLAYAF-ETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR 115 (277)
T ss_pred HHHHHHHhCC-----CCCEeeeeeEE-ecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5555555442 2332 222222 33456899999999999988653222 234444333322 223467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||++++ ++.++++|||.+..+...... ....+...++.++...-+..+...|++++...+.+
T Consensus 116 i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 116 IVYRDLKPENVLLDD--HGNVRISDLGLAVELKGGKKI-------KGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred cccCCCCHHHEEECC--CCCEEEccCcchhhhccCCcc-------ccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 999999999999985 889999999988766432111 11123455677777766666777899999877665
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 187 l~ 188 (277)
T cd05577 187 MI 188 (277)
T ss_pred Hh
Confidence 54
No 242
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.35 E-value=8.4e-12 Score=133.71 Aligned_cols=190 Identities=17% Similarity=0.178 Sum_probs=120.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||||...+..... .. ..-.
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~---------------------------------~~------~~~~ 47 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK---------------------------------RN------KVKR 47 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccch---------------------------------HH------HHHH
Confidence 5799999999999999 48999999885431110 00 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~l~qI~ 451 (766)
+..|...+..+. +++ +++++. +.....+++|||++|++|.++..... ..++...+...+ +...+..+|
T Consensus 48 ~~~e~~~l~~l~-----~~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 48 VLTEQEILATLD-----HPF--LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred HHHHHHHHHhCC-----CCC--chhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 344444444442 222 333332 33456799999999999998754221 223433333322 223367789
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHH----------------HHH-------HHhhcCHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE----------------AFY-------GIYEKDADK 508 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~----------------l~~-------a~~~~D~~~ 508 (766)
..|++|+|+||.||+++. ++.++|.|||++...+......... ... ....++..+
T Consensus 121 ~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y 198 (316)
T cd05574 121 LLGIVYRDLKPENILLHE--SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEY 198 (316)
T ss_pred HCCeeccCCChHHeEEcC--CCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCC
Confidence 999999999999999986 8899999999988765432111000 000 001234557
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 509 VLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 509 v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+++++..-+..+...|++++...+.+++
T Consensus 199 ~aPE~~~~~~~~~~~Di~slG~ll~~l~ 226 (316)
T cd05574 199 IAPEVISGDGHGSAVDWWTLGILLYEML 226 (316)
T ss_pred cCHHHHcCCCCCchHHHHHHHHHHHHHh
Confidence 7788877666677889999988776654
No 243
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.35 E-value=1.2e-11 Score=128.58 Aligned_cols=182 Identities=17% Similarity=0.171 Sum_probs=120.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.+|.|++|.||+|.+ ++..|++|+.+++-.. .-+|
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~-------------------------------------------~~~~ 48 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-------------------------------------------VEAF 48 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCChhH-------------------------------------------HHHH
Confidence 6899999999999998 6788999987543110 0134
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
.+|+..+.++ .+..-+.+...+.+ ...+++|||++|++|.++.... ....+...+...+. -..+..+|..|
T Consensus 49 ~~e~~~l~~l----~~~~i~~~~~~~~~--~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~ 122 (260)
T cd05073 49 LAEANVMKTL----QHDKLVKLHAVVTK--EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 122 (260)
T ss_pred HHHHHHHHhc----CCCCcceEEEEEcC--CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4455444443 22223444444433 5679999999999998865322 12233333333222 23367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||.+..+........ ........++++++...+..+...|++++...+.+
T Consensus 123 i~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~~-----~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05073 123 YIHRDLRAANILVSA--SLVCKIADFGLARVIEDNEYTAR-----EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 195 (260)
T ss_pred ccccccCcceEEEcC--CCcEEECCCcceeeccCCCcccc-----cCCcccccccCHhHhccCCcCccccchHHHHHHHH
Confidence 999999999999985 88999999999987654221100 00122345777888877777888899999877766
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 196 l~ 197 (260)
T cd05073 196 IV 197 (260)
T ss_pred HH
Confidence 55
No 244
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.34 E-value=3.3e-12 Score=140.91 Aligned_cols=186 Identities=16% Similarity=0.165 Sum_probs=111.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|.. +|+.||||+....... ... .-.
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------------------------~~~-----------~~~ 45 (372)
T cd07853 6 RPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-----------------------------LVS-----------CKR 45 (372)
T ss_pred ceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-----------------------------hHH-----------HHH
Confidence 6799999999999997 6999999976321110 000 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI 450 (766)
+.+|...+..+. +..-+.+-.++.. .....+++|||+++ .+.+... ....++...+...+ +-..+..+
T Consensus 46 ~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~~l~~~~~~~~~~qi~~aL~~L 119 (372)
T cd07853 46 VFRELKMLCFFK----HDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIV-SPQPLSSDHVKVFLYQILRGLKYL 119 (372)
T ss_pred HHHHHHHHHhCC----CCCcCCHhheecCCCccccceEEEEeecccc-CHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHH
Confidence 233444333332 1111122222211 11256999999986 4544331 12223444333332 22347889
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 529 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~ 529 (766)
|..|++|+|+||.||+++. ++.++|+|||++........... .-...+..++++++... ...+...|++++.
T Consensus 120 H~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~a~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 192 (372)
T cd07853 120 HSAGILHRDIKPGNLLVNS--NCVLKICDFGLARVEEPDESKHM-----TQEVVTQYYRAPEILMGSRHYTSAVDIWSVG 192 (372)
T ss_pred HhCCeeCCCCChHHEEECC--CCCEEeccccceeecccCccccC-----CCCCcCCCcCCHHHHcCCCCCCcHHHHHhHH
Confidence 9999999999999999986 88999999999987644321111 00123445677776643 2345667999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 193 ~il~el~~ 200 (372)
T cd07853 193 CIFAELLG 200 (372)
T ss_pred HHHHHHHc
Confidence 87776653
No 245
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.34 E-value=7.3e-12 Score=132.12 Aligned_cols=123 Identities=15% Similarity=0.147 Sum_probs=88.1
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceec
Q 004234 408 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 485 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~ 485 (766)
...+++|||++|++|.++.......++...+.....+ ..+..+|..|++|+|++|.||+++. ++.++++|||++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~Dfg~~~~ 158 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIADFGVADL 158 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEcCCcccee
Confidence 4568999999999999876433333455444433322 3467889999999999999999985 88999999999987
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 486 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 486 L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+.+...... .....+...++.++....+..+...|++++...+.+++
T Consensus 159 ~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~ 205 (279)
T cd05111 159 LYPDDKKYF----YSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMM 205 (279)
T ss_pred ccCCCcccc----cCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHH
Confidence 755432211 11122344577788877777888899999987776655
No 246
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.34 E-value=1.6e-11 Score=127.30 Aligned_cols=182 Identities=16% Similarity=0.130 Sum_probs=118.3
Q ss_pred cccccceeEEEEEee--c---CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--K---GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~---G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
-||.|++|+||+|.+ + +..||+|+.++.... ..+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------------~~~ 40 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-----------------------------------------AGK 40 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccch-----------------------------------------HHH
Confidence 489999999999987 2 268999987433211 012
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHh
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILS 452 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~ 452 (766)
-++.+|...+..+ .+..-+.+...+ .....+++|||++|++|.++..... ..+...+...+.+. .+..+|.
T Consensus 41 ~~~~~e~~~l~~l----~h~~iv~~~~~~--~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~ 113 (257)
T cd05060 41 KEFLREASVMAQL----DHPCIVRLIGVC--KGEPLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLES 113 (257)
T ss_pred HHHHHHHHHHHhc----CCCCeeeEEEEE--cCCceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhh
Confidence 2344454444433 221112222222 2456799999999999998754222 34444444433332 3677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHh--hcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIY--EKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~--~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
.|++|+|++|.||+++. ++.++|+|||++..+....... .+.. .....+++++....+..+...|++++..
T Consensus 114 ~~i~H~di~p~nili~~--~~~~kl~df~~~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 186 (257)
T cd05060 114 KHFVHRDLAARNVLLVN--RHQAKISDFGMSRALGAGSDYY-----RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGV 186 (257)
T ss_pred cCeeccCcccceEEEcC--CCcEEeccccccceeecCCccc-----ccccCccccccccCHHHhcCCCCCccchHHHHHH
Confidence 99999999999999986 8899999999998775432210 1100 1123577888888787888899999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 187 ~l~~~~ 192 (257)
T cd05060 187 TLWEAF 192 (257)
T ss_pred HHHHHH
Confidence 766554
No 247
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.34 E-value=9.7e-12 Score=130.14 Aligned_cols=183 Identities=19% Similarity=0.147 Sum_probs=121.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|+|++|.||+|+. +|+.|++|+...... .. ..-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------------------------------~~-----------~~~~ 45 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA------------------------------ED-----------EIED 45 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeecccc------------------------------ch-----------HHHH
Confidence 5789999999999998 589999998732110 00 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|.+.+..+. ++++.-+..+.......+++|||++|++|.+..... ..+...+...+.+ ..+..+|..|
T Consensus 46 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 46 IQQEIQFLSQCR-----SPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred HHHHHHHHHHcC-----CCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 334444444332 233322222323346679999999999998875432 3444444443332 2356789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||++..+....... ....+...++.++....+..++..|++++...+.+
T Consensus 119 i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~ 190 (274)
T cd06609 119 KIHRDIKAANILLSE--EGDVKLADFGVSGQLTSTMSKR------NTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIE 190 (274)
T ss_pred cccCCCCHHHEEECC--CCCEEEcccccceeeccccccc------ccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 8899999999998886542111 00123455777888777667788999999887766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 191 l~t 193 (274)
T cd06609 191 LAK 193 (274)
T ss_pred HHh
Confidence 553
No 248
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.34 E-value=8.5e-12 Score=133.44 Aligned_cols=186 Identities=15% Similarity=0.107 Sum_probs=117.3
Q ss_pred ccccccceeEEEEEeec---------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~---------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 369 (766)
++||+|++|.||+|... +..||+|+.++.....
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------------------- 65 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEK-------------------------------------- 65 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChH--------------------------------------
Confidence 68999999999999862 2469999886542211
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCC
Q 004234 370 VLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGV 433 (766)
Q Consensus 370 ~l~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~ 433 (766)
..-++..|...+.++. .++++ .+...+ ......+++|||++|++|.++..... ..+
T Consensus 66 ---~~~~~~~e~~~l~~l~----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l 137 (307)
T cd05098 66 ---DLSDLISEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQL 137 (307)
T ss_pred ---HHHHHHHHHHHHHHhc----CCCCEeeEEEEE-ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccC
Confidence 0012333444444332 22322 222222 33456899999999999998754321 113
Q ss_pred CHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004234 434 DRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 511 (766)
Q Consensus 434 d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~ 511 (766)
+...+...+.+ ..+..+|..|++|+|+||.||++++ ++.++|+|||.+..+........ . ........++++
T Consensus 138 ~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~a~~~~~~~~~~~--~--~~~~~~~~y~aP 211 (307)
T cd05098 138 SFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE--DNVMKIADFGLARDIHHIDYYKK--T--TNGRLPVKWMAP 211 (307)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC--CCcEEECCCcccccccccchhhc--c--ccCCCccceeCh
Confidence 33334333333 3467889999999999999999986 78999999999876643211100 0 001112456778
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 512 AMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 512 ~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+....+..+...|++++...+.+++
T Consensus 212 E~~~~~~~~~~~DvwslG~~l~el~ 236 (307)
T cd05098 212 EALFDRIYTHQSDVWSFGVLLWEIF 236 (307)
T ss_pred HHhccCCCCcHHHHHHHHHHHHHHH
Confidence 7776666777889999987766554
No 249
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.34 E-value=1.2e-11 Score=127.82 Aligned_cols=187 Identities=18% Similarity=0.138 Sum_probs=120.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|.|++|+||+|.. +|..|++|+........ ..-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~~~~ 45 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-----------------------------------------SVDE 45 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-----------------------------------------HHHH
Confidence 6799999999999998 58999999873211100 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceee--eccCCCeEEEEeecCCCChhhhhhhhh--cCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIF--WEYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~--~e~st~~vLVMEyieG~~L~d~~~l~~--~g~d~~~la~~lv~--~~l~qI 450 (766)
+.+|+..+..+ . ++++ +.++ .......+++|||++|.++.+...... ..++...+...+.+ ..+..+
T Consensus 46 ~~~e~~~l~~l----~-~~~i--~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l 118 (267)
T cd06610 46 LRKEVQAMSQC----N-HPNV--VKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL 118 (267)
T ss_pred HHHHHHHHHhc----C-CCCE--EEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 33444433332 1 2222 2222 233456799999999999998754321 23444444333322 236778
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVR 529 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~ 529 (766)
|..|++|+|++|.||++++ ++.++|+|||++..+........ . ......+...++.++....+ ..+...|++++.
T Consensus 119 h~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~~~~~~~~~~~~-~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG 194 (267)
T cd06610 119 HSNGQIHRDIKAGNILLGE--DGSVKIADFGVSASLADGGDRTR-K-VRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG 194 (267)
T ss_pred HhCCeecCCCCHHhEEEcC--CCCEEEcccchHHHhccCccccc-c-ccccccCChhhcChHHHccccCcCcccchHhHh
Confidence 9999999999999999986 78999999999987765432210 0 01112245567777777666 566778999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 195 ~i~~~l~~ 202 (267)
T cd06610 195 ITAIELAT 202 (267)
T ss_pred HHHHHHHh
Confidence 77666543
No 250
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.34 E-value=4e-12 Score=138.81 Aligned_cols=198 Identities=18% Similarity=0.211 Sum_probs=121.2
Q ss_pred HHHHhCCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcc
Q 004234 281 VEEELGAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAK 357 (766)
Q Consensus 281 ie~elG~~~eeiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~ 357 (766)
+++|++..+.++...|.. ++||.|++|.||+|.. +|+.||||+........
T Consensus 2 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-------------------------- 55 (343)
T cd07880 2 YRQEVNKTIWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSE-------------------------- 55 (343)
T ss_pred hhhhhhhhhhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccch--------------------------
Confidence 355666666666666644 7899999999999998 69999999864321100
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcC
Q 004234 358 RDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELG 432 (766)
Q Consensus 358 ~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~g 432 (766)
.... .+.+|+..+.++. +..-+.+..++. ......++||||+ |..+.++... ..
T Consensus 56 --------~~~~------~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~ 114 (343)
T cd07880 56 --------LFAK------RAYRELRLLKHMK----HENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EK 114 (343)
T ss_pred --------HHHH------HHHHHHHHHHhcC----CCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhc--CC
Confidence 0011 2233444444332 111122222221 1123458999999 6678776432 22
Q ss_pred CCHHHHHHHHH--HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHH
Q 004234 433 VDRKRLGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVL 510 (766)
Q Consensus 433 ~d~~~la~~lv--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~ 510 (766)
++...+...+. ...+..+|..|++|+|++|.||+++. ++.++++|||++..+...... ......+++
T Consensus 115 l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~a 183 (343)
T cd07880 115 LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCELKILDFGLARQTDSEMTG---------YVVTRWYRA 183 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeecccccccccCccc---------cccCCcccC
Confidence 34333333222 23467889999999999999999985 889999999999876543211 122344556
Q ss_pred HHHHHc-CCCCCCCCHHHHHHHHHHHH
Q 004234 511 QAMVQM-GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 511 ~~l~~l-G~~~~~~D~~~l~~~i~~~l 536 (766)
++.... ...+...|.+++...+.+++
T Consensus 184 PE~~~~~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 184 PEVILNWMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 666543 23456679998887766554
No 251
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.34 E-value=1.5e-11 Score=128.89 Aligned_cols=182 Identities=15% Similarity=0.169 Sum_probs=113.9
Q ss_pred ccccccceeEEEEEee--cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~--~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.+|.|++|.||+|++ +|. .|++|..+...... ..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~-----------------------------------------~~ 39 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD-----------------------------------------DH 39 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHH-----------------------------------------HH
Confidence 3689999999999998 354 46777663221110 01
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKR 437 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~~~ 437 (766)
-+|.+|...+.++. +++++ .+++. ...+..+++|||++|++|.++..... ..+....
T Consensus 40 ~~~~~E~~~l~~l~----~h~~i--v~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~ 113 (270)
T cd05047 40 RDFAGELEVLCKLG----HHPNI--INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 113 (270)
T ss_pred HHHHHHHHHHHhhc----cCCCe--eeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHH
Confidence 13455555555443 22332 22222 23455799999999999988653211 1123333
Q ss_pred HHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 438 LGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 438 la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
+...+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++.......... .......+++++...
T Consensus 114 ~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~--~~~~kl~dfgl~~~~~~~~~~~-------~~~~~~~y~apE~~~ 184 (270)
T cd05047 114 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIADFGLSRGQEVYVKKT-------MGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHHHHHHHHCCEeecccccceEEEcC--CCeEEECCCCCccccchhhhcc-------CCCCccccCChHHHc
Confidence 3333322 3467889999999999999999986 8899999999876432211110 011233477777776
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 004234 516 MGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 516 lG~~~~~~D~~~l~~~i~~~l 536 (766)
....+...|++++...+.+++
T Consensus 185 ~~~~~~~~Di~slG~il~el~ 205 (270)
T cd05047 185 YSVYTTNSDVWSYGVLLWEIV 205 (270)
T ss_pred cCCCCchhhHHHHHHHHHHHH
Confidence 666777889999987766554
No 252
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.34 E-value=9.9e-12 Score=131.36 Aligned_cols=124 Identities=20% Similarity=0.151 Sum_probs=86.8
Q ss_pred CCCeEEEEeecCCCChhhhhhhhh----------cCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCc
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDE----------LGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGR 474 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~----------~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~ 474 (766)
....+++|||++|.+|.++..... ..++...+...+.+ ..+..+|..|++|+|++|.||+++. ++.
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~--~~~ 168 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGK--NYT 168 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecC--CCc
Confidence 367899999999999988653211 12344444444333 2367889999999999999999986 789
Q ss_pred EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 475 LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 475 l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
++++|||++..+........ .........+++++....+..++..|++++...+.+++
T Consensus 169 ~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 169 IKIADFGMSRNLYSSDYYRV----QGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred eEEccccceeecccCcceee----cCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHH
Confidence 99999999886643321110 11112245678888887777888899999987776654
No 253
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.34 E-value=1.4e-11 Score=129.87 Aligned_cols=182 Identities=17% Similarity=0.173 Sum_probs=121.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++++|++|+||+|.+ +++.|++|+.+.... .+-.
T Consensus 25 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------------------------------------------~~~~ 61 (286)
T cd06614 25 EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-------------------------------------------NKEL 61 (286)
T ss_pred HhccCCCCeEEEEEEEccCCcEEEEEEEecCch-------------------------------------------hHHH
Confidence 6899999999999999 489999998843321 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+..+ .+ +++ .+...+ ......+++|||++|.+|.++.......++...+...+.+ ..+..+|..
T Consensus 62 ~~~e~~~l~~l----~~-~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~ 135 (286)
T cd06614 62 IINEILIMKDC----KH-PNIVDYYDSY-LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ 135 (286)
T ss_pred HHHHHHHHHHC----CC-CCeeEEEEEE-EECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 23333333332 12 332 222222 3346789999999999999976543223454444443333 336778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++++|||....+....... ....++..++.++...-+......|++++...+.
T Consensus 136 gi~H~dl~p~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~ 207 (286)
T cd06614 136 NVIHRDIKSDNILLSK--DGSVKLADFGFAAQLTKEKSKR------NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCI 207 (286)
T ss_pred CeeeCCCChhhEEEcC--CCCEEECccchhhhhccchhhh------ccccCCcccCCHhHhcCCCCCCccccHHHHHHHH
Confidence 9999999999999985 8899999999987765432211 1122455667777766555677889999998777
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 208 ~l~~ 211 (286)
T cd06614 208 EMAE 211 (286)
T ss_pred HHHh
Confidence 6653
No 254
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.34 E-value=8.1e-12 Score=133.40 Aligned_cols=182 Identities=18% Similarity=0.161 Sum_probs=119.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|.||+|+. +|+.|+||...-..... .-.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~------------------------------------------~~~ 62 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPK------------------------------------------KEL 62 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCch------------------------------------------HHH
Confidence 5799999999999997 69999999762110000 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+ . ++++.-+.-+.......+++|||++|++|.++... ...+...+...+.+ ..+..+|..|
T Consensus 63 ~~~e~~~l~~l----~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 63 IINEILVMKEL----K-NPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred HHHHHHHHHhc----C-CCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 23333333332 1 23332222122234567999999999999986532 23444444443322 3467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||++..+.+..... ....+...++.++...-+..+...|++++...+.+
T Consensus 136 i~H~dL~p~Nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ 207 (296)
T cd06655 136 VIHRDIKSDNVLLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (296)
T ss_pred cccCCCCHHHEEECC--CCCEEEccCccchhcccccccC------CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHH
Confidence 999999999999985 8899999999988776543211 11234566777887776666778899999877766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 208 llt 210 (296)
T cd06655 208 MVE 210 (296)
T ss_pred HHh
Confidence 553
No 255
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.34 E-value=6.4e-12 Score=130.72 Aligned_cols=185 Identities=17% Similarity=0.107 Sum_probs=117.8
Q ss_pred cccccceeEEEEEeec--------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARLK--------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 300 PIgsaSiGQVhrA~l~--------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
.||.|++|.||+|+.. ++.|+||....+....
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~---------------------------------------- 41 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQ---------------------------------------- 41 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchh----------------------------------------
Confidence 6899999999999972 2678899653321100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh------cCCCHHHHHHHHHH-
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE------LGVDRKRLGRYAVE- 444 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~------~g~d~~~la~~lv~- 444 (766)
..-.|.+|+..+..+ +++++.-..-+.......+++|||++|++|.+...... ...+...+.....+
T Consensus 42 -~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 115 (269)
T cd05044 42 -EKKEFLKEAHLMSNF-----NHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDV 115 (269)
T ss_pred -hHHHHHHHHHHHHhc-----CCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHH
Confidence 011344455544444 22333322222233456899999999999988653211 11333333333322
Q ss_pred -HHHHHHHhCCccccCCCCCcEEEeecCCC-----cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004234 445 -SYLEQILSHGFFHADPHPGNIAVDDVNGG-----RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 518 (766)
Q Consensus 445 -~~l~qI~~~GffHaDpHPGNILV~~~~~g-----~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~ 518 (766)
..+..+|..|++|+|++|.||+++. ++ .++++|||++..+........ .+.......+++++...-+.
T Consensus 116 ~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 189 (269)
T cd05044 116 AKGCVYLEQMHFIHRDLAARNCLVSE--KGYDADRVVKIGDFGLARDIYKSDYYRK----EGEGLLPVRWMAPESLLDGK 189 (269)
T ss_pred HHHHHHHHhCCcccCCCChheEEEec--CCCCCCcceEECCccccccccccccccc----CcccCCCccccCHHHHccCC
Confidence 2367789999999999999999986 44 799999999987643321100 01112235677888888888
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l 536 (766)
.++..|++++...+.+++
T Consensus 190 ~~~~~Dv~slG~il~ell 207 (269)
T cd05044 190 FTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred cccchhHHHHHHHHHHHH
Confidence 888999999998777665
No 256
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.34 E-value=1.8e-11 Score=129.63 Aligned_cols=182 Identities=14% Similarity=0.129 Sum_probs=120.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.|++|+.+-. .. . .+-.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~------------------------------~----------~~~~ 62 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQ------------------------------Q----------RREL 62 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEecc--ch------------------------------h----------HHHH
Confidence 6899999999999997 5899999975210 00 0 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|..-+..+ +++++.-+.-+.......+++|||++|++|.++... ...+...+...+.+ ..+..+|..|
T Consensus 63 ~~~e~~~l~~~-----~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~ 135 (285)
T cd06648 63 LFNEVVIMRDY-----QHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQG 135 (285)
T ss_pred HHHHHHHHHHc-----CCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 23343333332 234333333333445678999999999999986533 23444444433322 2367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++|+|||+...+....... ....+...+++++....+..+...|++++...+.+
T Consensus 136 i~H~dl~p~Nil~~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 207 (285)
T cd06648 136 VIHRDIKSDSILLTS--DGRVKLSDFGFCAQVSKEVPRR------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 207 (285)
T ss_pred eecCCCChhhEEEcC--CCcEEEcccccchhhccCCccc------ccccCCccccCHHHhcCCCCCCcccHHHHHHHHHH
Confidence 999999999999985 8899999999887664432111 01224566778888766666777899999887776
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 208 ll~ 210 (285)
T cd06648 208 MVD 210 (285)
T ss_pred HHh
Confidence 653
No 257
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.34 E-value=1.2e-11 Score=129.39 Aligned_cols=118 Identities=14% Similarity=0.043 Sum_probs=80.4
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCC-------cEEE
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGG-------RLIF 477 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g-------~l~L 477 (766)
....+++|||++|+++..+........+...+...+.+ ..+..+|..|++|+|++|.||++.. ++ .+++
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~~~~~~~~~l 153 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAR--EGIDGECGPFIKL 153 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEec--CCccCCCCceeEe
Confidence 45679999999999998765432233454444333322 3377889999999999999999974 33 3899
Q ss_pred EeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCCHHHHHHHHHHHH
Q 004234 478 YDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 478 iDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~~~D~~~l~~~i~~~l 536 (766)
.|||++..+..... ..++..+++++... .+..+...|++++...+.+++
T Consensus 154 ~d~g~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~ 203 (262)
T cd05077 154 SDPGIPITVLSRQE----------CVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEIC 203 (262)
T ss_pred CCCCCCccccCccc----------ccccccccChhhhcCCCCCCchhHHHHHHHHHHHHH
Confidence 99998876533210 12345577777665 344566789999987766554
No 258
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.34 E-value=1.6e-11 Score=127.54 Aligned_cols=182 Identities=15% Similarity=0.120 Sum_probs=118.9
Q ss_pred ccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||.|++|.||+|+.. |+.||+|+..+..... .+ .+-.+.
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------------~~------~~~~~~ 41 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE---------------------------------TG------QQEHIF 41 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh---------------------------------hh------HHHHHH
Confidence 689999999999993 8999999874321100 00 112344
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCcc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFF 456 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~Gff 456 (766)
+|...+.++ . ++++.-..-+....+..+++|||++|++|.+..... ..+....+...+ +-..+..+|..|++
T Consensus 42 ~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~ 115 (262)
T cd05572 42 SEKEILEEC----N-HPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGII 115 (262)
T ss_pred HHHHHHHhC----C-CCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 555444433 2 232222111223345679999999999998865322 123333333322 23346889999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
|+|++|.||+++. ++.++|+|||.+..+...... ....++..++.+++......+...|++++...+.+++
T Consensus 116 h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~~~~-------~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~ 186 (262)
T cd05572 116 YRDLKPENLLLDS--NGYVKLVDFGFAKKLKSGQKT-------WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186 (262)
T ss_pred cCCCCHHHEEEcC--CCCEEEeeCCcccccCccccc-------ccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence 9999999999986 889999999999988664311 1123455677787776655677789999987766654
No 259
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.34 E-value=2e-11 Score=124.99 Aligned_cols=185 Identities=17% Similarity=0.131 Sum_probs=120.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.|++|+....... .+... .
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~~------~ 45 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS----------------------------------EKERE------D 45 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC----------------------------------hHHHH------H
Confidence 5799999999999999 4899999987322111 00111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYAVES--YLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~---~~g~d~~~la~~lv~~--~l~qI~ 451 (766)
+..|.+.+..+. ++++.-+.-........+++|||++|.+|.+..... ...++...+...+.+. .+..+|
T Consensus 46 ~~~e~~~l~~l~-----~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 46 ALNEVKILKKLN-----HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred HHHHHHHHHhcC-----CCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 223333333332 222222222222346789999999999998865432 1345555554444333 367899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|++|.||++++ ++.++++|||++....... ... ....+++.++.++.......+...|++++...
T Consensus 121 ~~~~~H~dl~~~nil~~~--~~~~~l~d~~~~~~~~~~~--~~~----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 192 (258)
T cd08215 121 SRKILHRDIKPQNIFLTS--NGLVKLGDFGISKVLSSTV--DLA----KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCV 192 (258)
T ss_pred hCCEecccCChHHeEEcC--CCcEEECCccceeecccCc--cee----cceeeeecccChhHhccCCCCccccHHHHHHH
Confidence 999999999999999985 7899999999998875543 111 11234555677777666666778899998876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 193 ~~~l~ 197 (258)
T cd08215 193 LYELC 197 (258)
T ss_pred HHHHH
Confidence 65544
No 260
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.34 E-value=2e-11 Score=126.12 Aligned_cols=185 Identities=16% Similarity=0.084 Sum_probs=120.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||.++. +|+.|++|.....-. +. ...-+
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-----------------------------~~-----------~~~~~ 45 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-----------------------------SE-----------KERRD 45 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeeccc-----------------------------ch-----------hHHHH
Confidence 5799999999999988 689999997521100 00 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++. +..-+.+...+ ......+++|||++|++|.+..... ....+...+...+.+ ..+..+|..
T Consensus 46 ~~~e~~~l~~~~----h~~i~~~~~~~-~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 46 ALNEIVILSLLQ----HPNIIAYYNHF-MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred HHHHHHHHHhCC----CCCeeEEEeEE-ecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445655555542 22222333333 3346679999999999999865432 222444444433322 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||+++. ++.++++|||.+..+...... .....+...++++++......+...|++++...+.
T Consensus 121 ~i~h~dl~p~ni~~~~--~~~~kl~d~~~~~~~~~~~~~------~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~ 192 (256)
T cd08221 121 GILHRDIKTLNIFLTK--AGLIKLGDFGISKILGSEYSM------AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLY 192 (256)
T ss_pred CccccCCChHhEEEeC--CCCEEECcCcceEEccccccc------ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHH
Confidence 9999999999999986 889999999999877554310 01123456677777765544566789999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 ~l~ 195 (256)
T cd08221 193 ELL 195 (256)
T ss_pred HHH
Confidence 654
No 261
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.34 E-value=1.3e-11 Score=131.47 Aligned_cols=183 Identities=14% Similarity=0.156 Sum_probs=114.6
Q ss_pred ccccccceeEEEEEee--cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~--~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.||.|++|+||+|++ +|. .|++|..+...... ..
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~~ 46 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASEN-----------------------------------------DH 46 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHH-----------------------------------------HH
Confidence 5799999999999998 344 46888653211100 01
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRKRL 438 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~~~l 438 (766)
-+|.+|...+.++. +++++ .+... .......+++|||+++++|.++..... ..++...+
T Consensus 47 ~~~~~E~~~l~~l~----~hp~iv~~~~~-~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~ 121 (297)
T cd05089 47 RDFAGELEVLCKLG----HHPNIINLLGA-CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQL 121 (297)
T ss_pred HHHHHHHHHHHhhc----CCCchhheEEE-EccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHH
Confidence 13555666555542 22332 22222 223456799999999999988653211 11233333
Q ss_pred HHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004234 439 GRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 516 (766)
Q Consensus 439 a~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l 516 (766)
...+.+ ..+..+|..|++|+|+||.||+++. ++.++|+|||++.......... .......+++++....
T Consensus 122 ~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~ 192 (297)
T cd05089 122 LQFASDVATGMQYLSEKQFIHRDLAARNVLVGE--NLASKIADFGLSRGEEVYVKKT-------MGRLPVRWMAIESLNY 192 (297)
T ss_pred HHHHHHHHHHHHHHHHCCcccCcCCcceEEECC--CCeEEECCcCCCccccceeccC-------CCCcCccccCchhhcc
Confidence 333322 3478899999999999999999986 7899999999886432211110 0011234667777766
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q 004234 517 GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 517 G~~~~~~D~~~l~~~i~~~l 536 (766)
+..+...|++++...+.+++
T Consensus 193 ~~~~~~~DvwSlG~il~el~ 212 (297)
T cd05089 193 SVYTTKSDVWSFGVLLWEIV 212 (297)
T ss_pred CCCCchhhHHHHHHHHHHHH
Confidence 66677889999988776654
No 262
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.34 E-value=6.4e-12 Score=131.74 Aligned_cols=184 Identities=19% Similarity=0.172 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+........ .. +-+
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~----------------------------------~~------~~~ 45 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG----------------------------------GI------PNQ 45 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccc----------------------------------hh------hHH
Confidence 4689999999999998 58999999874321100 00 113
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++. +++ +.+...+ ......++||||+ |.+|.+........++...+...+.+ ..+..+|..
T Consensus 46 ~~~e~~~l~~~~-----~~~i~~~~~~~-~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 118 (286)
T cd07832 46 ALREIKALQACQ-----HPYVVKLLDVF-PHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN 118 (286)
T ss_pred HHHHHHHHHhCC-----CCCCcceeeEE-ecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344444444332 222 2222222 3356679999999 99998865433333454444433322 346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i 532 (766)
|++|+|+||.||+++. ++.++++|||++..+.......+. ...++..++++++.... ..++..|++++...+
T Consensus 119 ~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 191 (286)
T cd07832 119 GIMHRDLKPANLLISA--DGVLKIADFGLARLFSEEEPRLYS-----HQVATRWYRAPELLYGARKYDPGVDLWAVGCIF 191 (286)
T ss_pred CeecCCcCHHHEEEcC--CCcEEEeeeeecccccCCCCCccc-----cccCcccccCceeeeccccCCchhHHHHHHHHH
Confidence 9999999999999986 889999999999887654321111 11245556667665432 335678999988776
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 192 ~~l~ 195 (286)
T cd07832 192 AELL 195 (286)
T ss_pred HHHH
Confidence 6654
No 263
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.33 E-value=3.9e-12 Score=141.77 Aligned_cols=178 Identities=11% Similarity=0.096 Sum_probs=115.6
Q ss_pred ccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
..||.|++|.||+|.. .++.||||+...+.
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~---------------------------------------------- 131 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK---------------------------------------------- 131 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEeccccc----------------------------------------------
Confidence 5799999999999986 25789999763220
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~ 451 (766)
++.+|.+.+..+. + +++ .+-..+ ......+++||++.| .+.+... ....+....+...+.+ ..+..+|
T Consensus 132 -~~~~E~~il~~l~----h-~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH 202 (392)
T PHA03207 132 -TPGREIDILKTIS----H-RAIINLIHAY-RWKSTVCMVMPKYKC-DLFTYVD-RSGPLPLEQAITIQRRLLEALAYLH 202 (392)
T ss_pred -cHHHHHHHHHhcC----C-CCccceeeeE-eeCCEEEEEehhcCC-CHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0112333333331 2 222 222222 334567999999976 4444331 1223344443333322 3478899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|+||.||+++. ++.++|+|||++..+.......-. ....++..++++++...+..+...|++++...
T Consensus 203 ~~givHrDlkp~Nill~~--~~~~~l~DfG~a~~~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi 276 (392)
T PHA03207 203 GRGIIHRDVKTENIFLDE--PENAVLGDFGAACKLDAHPDTPQC----YGWSGTLETNSPELLALDPYCAKTDIWSAGLV 276 (392)
T ss_pred HCCccccCCCHHHEEEcC--CCCEEEccCccccccCcccccccc----cccccccCccCHhHhcCCCCCchhhHHHHHHH
Confidence 999999999999999986 889999999999876543211100 11235677888998887777788999999988
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 277 l~el~~ 282 (392)
T PHA03207 277 LFEMSV 282 (392)
T ss_pred HHHHHH
Confidence 777653
No 264
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.33 E-value=4.9e-12 Score=152.61 Aligned_cols=186 Identities=15% Similarity=0.175 Sum_probs=134.6
Q ss_pred ccccccceeEEEEEee---cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL---KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l---~G~----~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..||.|.||-||+|+. +|. .||||..++... .
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-----------------------------------------~ 736 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-----------------------------------------E 736 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCC-----------------------------------------H
Confidence 5899999999999998 354 378887644322 2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh------hcCCCHHHHHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD------ELGVDRKRLGRYAVE 444 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~------~~g~d~~~la~~lv~ 444 (766)
.++.||.+||.+|..|. +++| ..--|-.+ ....++++|||+|+.|-.+.+.. ...+...++....++
T Consensus 737 ~~~~~Fl~Ea~~m~~f~-----HpNiv~liGv~l~-~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 737 QEVSDFLKEALLMSKFD-----HPNIVSLIGVCLD-SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred HHHHHHHHHHHHHhcCC-----CcceeeEEEeecC-CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 35679999999999884 3433 22222222 67789999999999999877654 445667777777666
Q ss_pred HH--HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004234 445 SY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 522 (766)
Q Consensus 445 ~~--l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~ 522 (766)
.. ++++.+.+|||||+-..|.|++. ...+++.||||++.+-..+. |..--. ..--...|.++...-|+.+.+
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VKIaDFGlArDiy~~~y--yr~~~~--a~lPvkWm~PEsl~d~iFtsk 884 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDE--RRVVKIADFGLARDIYDKDY--YRKHGE--AMLPVKWMPPESLKDGIFTSK 884 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecc--cCcEEEcccchhHhhhhchh--eeccCc--cccceecCCHHHHhhcccccc
Confidence 54 78889999999999999999986 68899999999995533221 111000 111245677777777888999
Q ss_pred CCHHHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFFLN 537 (766)
Q Consensus 523 ~D~~~l~~~i~~~l~ 537 (766)
+|+++|...+-+++.
T Consensus 885 SDvWsFGVllWEifs 899 (1025)
T KOG1095|consen 885 SDVWSFGVLLWEIFS 899 (1025)
T ss_pred cchhhhHHHHHHHHh
Confidence 999999987766553
No 265
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.33 E-value=2e-11 Score=129.10 Aligned_cols=183 Identities=19% Similarity=0.221 Sum_probs=119.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.+ +++.||+|+..+.... ..+-+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------------------------------------~~~~~ 45 (287)
T cd06621 7 SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP-----------------------------------------DLQKQ 45 (287)
T ss_pred EEeccCCceEEEEEEECCCCeEEEEEEEecCCch-----------------------------------------HHHHH
Confidence 6899999999999999 5899999987432110 01223
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeecc-CCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHHHH--HHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEY-TTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYAVE--SYLEQ 449 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l-~--~~g~d~~~la~~lv~--~~l~q 449 (766)
+.+|.+.+.++. ++++ .+...+... .+..+|||||++|++|.++... . ....+...+...+.+ ..+..
T Consensus 46 ~~~e~~~l~~l~-----h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~ 120 (287)
T cd06621 46 ILRELEINKSCK-----SPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSY 120 (287)
T ss_pred HHHHHHHHHhCC-----CCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 455555554442 2322 222233222 2356999999999999885431 1 112333333333222 23677
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..|++|+|++|.||+++. ++.++++|||++..+...... ...++..+++++....+..+...|++++.
T Consensus 121 lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~y~~pE~~~~~~~~~~~Dv~slG 190 (287)
T cd06621 121 LHSRKIIHRDIKPSNILLTR--KGQVKLCDFGVSGELVNSLAG--------TFTGTSFYMAPERIQGKPYSITSDVWSLG 190 (287)
T ss_pred HHHCCcccCCCCHHHEEEec--CCeEEEeeccccccccccccc--------cccCCccccCHHHhcCCCCCchhhHHHHH
Confidence 89999999999999999986 788999999998776543221 12234556777777666677788999999
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 191 ~il~~l~~ 198 (287)
T cd06621 191 LTLLEVAQ 198 (287)
T ss_pred HHHHHHHh
Confidence 87776653
No 266
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.33 E-value=1.5e-11 Score=127.64 Aligned_cols=194 Identities=14% Similarity=0.104 Sum_probs=120.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.||+|+.++....... ... ..-+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~------------------------------~~~------~~~~ 49 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSE------------------------------QEE------VVEA 49 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchh------------------------------HHH------HHHH
Confidence 5799999999999998 6899999987533211100 000 1123
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|++.+.++. +..-+.+..++ ......+++|||++|++|.++... ....+...+...+ +-..+..+|..|
T Consensus 50 ~~~e~~~l~~l~----h~~iv~~~~~~-~~~~~~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 50 LRKEIRLMARLN----HPHIIRMLGAT-CEDSHFNLFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred HHHHHHHHHHcC----CCceehhhcee-ccCCeEEEEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 445555555542 22222222222 234567999999999999987532 1223433333322 223467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++..++|+|||+...+....... ........+...++++++..-...+...|++++...+.+
T Consensus 124 i~H~~i~~~nil~~~-~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~ 200 (268)
T cd06630 124 IIHRDVKGANLLIDS-TGQRLRIADFGAAARLAAKGTGA--GEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIE 200 (268)
T ss_pred eecCCCCHHHEEEcC-CCCEEEEcccccccccccccccC--CccccccccccceeCHhHhccCCCCcccchHHHHHHHHH
Confidence 999999999999975 23469999999998876431110 000011123456677777655556677899999887766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 201 l~~ 203 (268)
T cd06630 201 MAT 203 (268)
T ss_pred HHh
Confidence 653
No 267
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.33 E-value=1.3e-11 Score=128.90 Aligned_cols=184 Identities=16% Similarity=0.129 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..||.|++|.||+|.+. +..||+|....+...
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~----------------------------------------- 50 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM----------------------------------------- 50 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH-----------------------------------------
Confidence 67999999999999983 268999986432110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc---------CCCHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL---------GVDRKRLGR 440 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~---------g~d~~~la~ 440 (766)
.....+.+|+..+..+. +++ +.+++. ......+++|||++|++|.++...... ..+...+..
T Consensus 51 ~~~~~~~~e~~~l~~~~-----~~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 51 RERIEFLNEASVMKEFN-----CHH--VVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred HHHHHHHHHHHHHHhCC-----CCc--eeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 01224455555554432 222 223332 334668999999999999986532111 122333333
Q ss_pred HHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004234 441 YAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 518 (766)
Q Consensus 441 ~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~ 518 (766)
.+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++..+........ .+.......+++++...-+.
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~ 197 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAE--DLTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPESLKDGV 197 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcC--CCCEEECCcccchhhccCccccc----CCCCCccccccCHHHHhcCC
Confidence 3322 3467889999999999999999986 89999999999876644321000 01111234677888877777
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l 536 (766)
.++..|++++...+.+++
T Consensus 198 ~~~~~Di~slG~il~el~ 215 (277)
T cd05032 198 FTTKSDVWSFGVVLWEMA 215 (277)
T ss_pred CCcccchHHHHHHHHHhh
Confidence 888899999987766554
No 268
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.33 E-value=1.2e-11 Score=128.31 Aligned_cols=127 Identities=13% Similarity=0.093 Sum_probs=84.4
Q ss_pred cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecce
Q 004234 406 YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 483 (766)
Q Consensus 406 ~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv 483 (766)
..+..+++|||+.|++|.++............+...+ +...+..+|..|++|+|++|.||++++ ++.++++|||++
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~--~~~~kl~dfg~~ 145 (262)
T cd05058 68 SEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE--SFTVKVADFGLA 145 (262)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCcccc
Confidence 3445799999999999998754322223333333322 223467889999999999999999986 889999999999
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 484 GSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 484 ~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
..+.......... .........+++++....+..+...|++++...+.+++
T Consensus 146 ~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 196 (262)
T cd05058 146 RDIYDKEYYSVHN--HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 196 (262)
T ss_pred ccccCCcceeecc--cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHH
Confidence 8664422110000 00112234577777776666677789999987766654
No 269
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.32 E-value=8.8e-12 Score=145.94 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=79.3
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCC-----------------CH-HHHHHHH---HHHHHHHHHhCCccccCCCCCcE
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGV-----------------DR-KRLGRYA---VESYLEQILSHGFFHADPHPGNI 465 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~-----------------d~-~~la~~l---v~~~l~qI~~~GffHaDpHPGNI 465 (766)
....+|+|||+++++|.++........ .+ ..++..+ +-..+.++|..|++|+|+||.||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 456799999999999988653221100 00 1111111 12347789999999999999999
Q ss_pred EEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC----------------------CCC
Q 004234 466 AVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV----------------------PTG 523 (766)
Q Consensus 466 LV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~----------------------~~~ 523 (766)
|++. .++.++|+|||++..+....... .....+++.+++++...+.... ...
T Consensus 287 Ll~~-~~~~~KL~DFGlA~~l~~~~~~~-----~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 287 IFSE-GSGSFKIIDLGAAADLRVGINYI-----PKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred EEeC-CCCcEEEEeCCCccccccccccC-----CcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 9984 35789999999998664321110 0112346677888765443222 234
Q ss_pred CHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFL 536 (766)
Q Consensus 524 D~~~l~~~i~~~l 536 (766)
|++++...+.+++
T Consensus 361 DVwSlGviL~el~ 373 (566)
T PLN03225 361 DIYSAGLIFLQMA 373 (566)
T ss_pred ccHHHHHHHHHHH
Confidence 9999998777665
No 270
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=9.7e-12 Score=141.79 Aligned_cols=183 Identities=19% Similarity=0.184 Sum_probs=116.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.||-|.|-.|+. +|+.+|||+..-...- -+..-..+.+|+-
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~---------------------------------s~s~~~~IerEIv 64 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL---------------------------------SSSQPAGIEREIV 64 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeecccccc---------------------------------ccccccchhhhhH
Confidence 5699999999999999 7999999998322100 0000011222221
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~G 454 (766)
.|.. +.+ ++|---.-+|+-..+.+||.||++|+.|-++.- .+.++...+-+....+. .+..+|..+
T Consensus 65 ------iMkL----i~H-pnVl~LydVwe~~~~lylvlEyv~gGELFdylv-~kG~l~e~eaa~ff~QIi~gv~yCH~~~ 132 (786)
T KOG0588|consen 65 ------IMKL----IEH-PNVLRLYDVWENKQHLYLVLEYVPGGELFDYLV-RKGPLPEREAAHFFRQILDGVSYCHAFN 132 (786)
T ss_pred ------HHHH----hcC-CCeeeeeeeeccCceEEEEEEecCCchhHHHHH-hhCCCCCHHHHHHHHHHHHHHHHHhhhc
Confidence 1211 222 333222233455667899999999999998753 33334444434433332 256678999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC--CCCCCHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL--VPTGDTTAVRRTA 532 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~--~~~~D~~~l~~~i 532 (766)
|.|+|+||.|++++. .++|++.||||+..-.+. .+. -...+.+.|++++++. |.. ....|+++=...+
T Consensus 133 icHRDLKpENlLLd~--~~nIKIADFGMAsLe~~g---klL----eTSCGSPHYA~PEIV~-G~pYdG~~sDVWSCGVIL 202 (786)
T KOG0588|consen 133 ICHRDLKPENLLLDV--KNNIKIADFGMASLEVPG---KLL----ETSCGSPHYAAPEIVS-GRPYDGRPSDVWSCGVIL 202 (786)
T ss_pred ceeccCCchhhhhhc--ccCEeeeccceeecccCC---ccc----cccCCCcccCCchhhc-CCCCCCCccccchhHHHH
Confidence 999999999999987 566999999999864432 122 2346799999999884 332 2346888777655
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
..+|
T Consensus 203 fALL 206 (786)
T KOG0588|consen 203 FALL 206 (786)
T ss_pred HHHH
Confidence 5444
No 271
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.32 E-value=1.7e-11 Score=128.56 Aligned_cols=183 Identities=17% Similarity=0.223 Sum_probs=111.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +|+.||||..++..... .+.+
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------------~~~~ 45 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-----------------------------------------EQKR 45 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-----------------------------------------HHHH
Confidence 5799999999999999 59999999875432211 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l---~~~g~d~~~la~~lv~--~~l~qI 450 (766)
+..|.....+ .. +++++ .+...+ ...+..+++|||++| .+.++... ....++...+...+.+ ..+..+
T Consensus 46 ~~~e~~~~~~---~~-~~~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 46 LLMDLDISMR---SV-DCPYTVTFYGAL-FREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred HHHHHHHHHH---Hc-CCCCeeeeeEEE-ecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2222222111 11 22322 222322 235668999999986 45554321 1122444444343333 336778
Q ss_pred HhC-CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC----CCCCCCCH
Q 004234 451 LSH-GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG----VLVPTGDT 525 (766)
Q Consensus 451 ~~~-GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG----~~~~~~D~ 525 (766)
|.. |++|+|+||+||+++. ++.++++|||++..+....... ...+...+++++..... ..+...|+
T Consensus 120 H~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di 190 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINR--NGQVKLCDFGISGYLVDSVAKT-------IDAGCKPYMAPERINPELNQKGYDVKSDV 190 (283)
T ss_pred hhcCCeecCCCCHHHEEECC--CCCEEEeecccccccccccccc-------cccCCccccChhhcCCcccccccCccccc
Confidence 886 9999999999999986 8899999999988765422110 01234456677765432 23566899
Q ss_pred HHHHHHHHHHHH
Q 004234 526 TAVRRTAQFFLN 537 (766)
Q Consensus 526 ~~l~~~i~~~l~ 537 (766)
+++...+.+++.
T Consensus 191 ~slG~~l~~l~~ 202 (283)
T cd06617 191 WSLGITMIELAT 202 (283)
T ss_pred hhhHHHHHHHHh
Confidence 999887766553
No 272
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.32 E-value=1.8e-11 Score=125.95 Aligned_cols=185 Identities=15% Similarity=0.119 Sum_probs=119.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +++.||||.....-.. .+. .-.
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~------~~~ 45 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT----------------------------------KDE------RLA 45 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccc----------------------------------cHH------HHH
Confidence 5799999999999998 5899999987322100 000 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|++.+.++. ++++....-........+++|||++|++|.++..... ...+...+...+.+ ..+..+|..
T Consensus 46 ~~~e~~~l~~~~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 46 AQNECQVLKLLS-----HPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred HHHHHHHHhhCC-----CCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 344555444432 2322222212223456799999999999998754322 22444444443322 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|+||++++ .++.+++.|||++..+....... ...+...+++++.......+...|++++...+.
T Consensus 121 ~i~h~dl~~~nil~~~-~~~~~~l~d~~~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 192 (256)
T cd08220 121 LILHRDLKTQNILLDK-HKMVVKIGDFGISKILSSKSKAY-------TVVGTPCYISPELCEGKPYNQKSDIWALGCVLY 192 (256)
T ss_pred CeecCCCCHHHEEEcC-CCCEEEEccCCCceecCCCcccc-------ccccCCcccCchhccCCCCCcccchHHHHHHHH
Confidence 9999999999999975 34568999999998876542211 012345677777777666677889999987766
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 ~l~ 195 (256)
T cd08220 193 ELA 195 (256)
T ss_pred HHH
Confidence 554
No 273
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.32 E-value=1.2e-11 Score=130.26 Aligned_cols=180 Identities=17% Similarity=0.240 Sum_probs=110.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||+|+.+....+. -...+.+|++
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~-----------------------------------~~~~~~~e~~ 51 (286)
T cd06622 7 DELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDES-----------------------------------KFNQIIMELD 51 (286)
T ss_pred hhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHH-----------------------------------HHHHHHHHHH
Confidence 5789999999999999 59999999774321110 0011122222
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh--hcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD--ELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~--~~g~d~~~la~~lv~--~~l~qI 450 (766)
.....+ |+.++...+. ..+..+++|||++|.+|.++.... ...++...+...+.+ ..+..+
T Consensus 52 ~l~~~~~~~i~~~~~~~~-------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L 118 (286)
T cd06622 52 ILHKAVSPYIVDFYGAFF-------------IEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFL 118 (286)
T ss_pred HHHhcCCCcHHhhhhhee-------------cCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHH
Confidence 222111 2222222211 134578999999999998765432 113444433333322 235667
Q ss_pred Hh-CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC------CCCC
Q 004234 451 LS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL------VPTG 523 (766)
Q Consensus 451 ~~-~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~------~~~~ 523 (766)
|. .|++|+|++|.||+++. ++.++++|||++..+....... ..+...+++++....+.. +...
T Consensus 119 H~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~y~aPE~~~~~~~~~~~~~~~~~ 188 (286)
T cd06622 119 KEEHNIIHRDVKPTNVLVNG--NGQVKLCDFGVSGNLVASLAKT--------NIGCQSYMAPERIKSGGPNQNPTYTVQS 188 (286)
T ss_pred HhcCCEeeCCCCHHHEEECC--CCCEEEeecCCcccccCCcccc--------CCCccCccCcchhcCCCCCccCCCCccc
Confidence 75 69999999999999986 8899999999987764332211 123445667777654432 5567
Q ss_pred CHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFL 536 (766)
Q Consensus 524 D~~~l~~~i~~~l 536 (766)
|++++...+.+++
T Consensus 189 DiwslG~il~~l~ 201 (286)
T cd06622 189 DVWSLGLSILEMA 201 (286)
T ss_pred chHhHHHHHHHHH
Confidence 9999987776654
No 274
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.32 E-value=1.5e-11 Score=127.75 Aligned_cols=185 Identities=14% Similarity=0.091 Sum_probs=116.4
Q ss_pred cccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 300 PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.||+|++|.||+|.+ +++.||||+.+...... . . .-
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~------------------------------~----~------~~ 41 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDP------------------------------A----L------KD 41 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcH------------------------------H----H------HH
Confidence 489999999999976 47899999874332110 0 0 11
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
++..|..-+..+ +++++.-..-+. .....+++|||+++++|.++.... ...+...+...+.+ ..+..+|..
T Consensus 42 ~~~~e~~~l~~l-----~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~ 114 (257)
T cd05116 42 ELLREANVMQQL-----DNPYIVRMIGIC-EAESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEET 114 (257)
T ss_pred HHHHHHHHHHhC-----CCCCcceEEEEE-cCCCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 233444433333 223322111111 134568999999999998875422 23444444333322 346888999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|+||.||++++ ++.++++|||++..+.......... ........+++++....+..+...|++++...+.
T Consensus 115 ~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05116 115 NFVHRDLAARNVLLVT--QHYAKISDFGLSKALGADENYYKAK---THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMW 189 (257)
T ss_pred CEeecccchhhEEEcC--CCeEEECCCccccccCCCCCeeeec---CCCCCCccccCHhHhccCCcCchhHHHHHHHHHH
Confidence 9999999999999986 7899999999998775432211000 0011235677788777677777889999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 190 el~ 192 (257)
T cd05116 190 EAF 192 (257)
T ss_pred HHH
Confidence 654
No 275
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=1.8e-12 Score=132.82 Aligned_cols=188 Identities=22% Similarity=0.227 Sum_probs=128.8
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004234 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (766)
Q Consensus 294 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 370 (766)
++|+- .|+|.|-||+||.|+. ++--||+||.. +..+ +......+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlf-------Ksqi--------------------------~~~~v~~q 68 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLF-------KSQI--------------------------LKTQVEHQ 68 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeee-------HHHH--------------------------HHhcchhh
Confidence 35665 7999999999999999 47899999971 1110 01223344
Q ss_pred HHHHHHHHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHH
Q 004234 371 LYQEIDYTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VES 445 (766)
Q Consensus 371 l~~ElDf~~EA--~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~l--v~~ 445 (766)
+.+|+....-. .|+-++...|.+ +.+.+|++||..++.+-..... ....++...-+..+ +..
T Consensus 69 lrREiEIqs~L~hpnilrlY~~fhd-------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~ 135 (281)
T KOG0580|consen 69 LRREIEIQSHLRHPNILRLYGYFHD-------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLAN 135 (281)
T ss_pred hhheeEeecccCCccHHhhhhheec-------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHH
Confidence 55554433222 266666665544 4567899999998887764331 22223333333333 233
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 525 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~ 525 (766)
.+..+|..+++|||+||.|+|+.. +|.+++.|||-...-+...|..+ .+..+++.+++.+--......|.
T Consensus 136 Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfGwsV~~p~~kR~tl--------cgt~dyl~pEmv~~~~hd~~Vd~ 205 (281)
T KOG0580|consen 136 ALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFGWSVHAPSNKRKTL--------CGTLDYLPPEMVEGRGHDKFVDL 205 (281)
T ss_pred HHHHhccCCcccCCCCHHHhccCC--CCCeeccCCCceeecCCCCceee--------ecccccCCHhhcCCCCccchhhH
Confidence 467789999999999999999986 89999999998887766566544 45677888888877667777899
Q ss_pred HHHHHHHHHHHH
Q 004234 526 TAVRRTAQFFLN 537 (766)
Q Consensus 526 ~~l~~~i~~~l~ 537 (766)
+.+....++|+-
T Consensus 206 w~lgvl~yeflv 217 (281)
T KOG0580|consen 206 WSLGVLCYEFLV 217 (281)
T ss_pred HHHHHHHHHHHh
Confidence 988876666653
No 276
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.32 E-value=9e-12 Score=131.54 Aligned_cols=184 Identities=15% Similarity=0.089 Sum_probs=114.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|.||+|.. +|+.||||..++..... . ...
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~------------------------~-----------------~~~ 49 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG------------------------A-----------------PFT 49 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC------------------------C-----------------chh
Confidence 6899999999999998 58999999875432111 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+. ++++.-..-+.......++||||++| +|.++.......++...+...+.+ ..+..+|..|
T Consensus 50 ~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~ 123 (291)
T cd07844 50 AIREASLLKDLK-----HANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR 123 (291)
T ss_pred HHHHHHHHhhCC-----CcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 223444444432 23332222222334567999999997 777654322233444444443322 3477889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||+++. ++.++++|||.+..........- . ......++++++... ...+...|++++...+.
T Consensus 124 i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~-~-----~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~ 195 (291)
T cd07844 124 VLHRDLKPQNLLISE--RGELKLADFGLARAKSVPSKTYS-N-----EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY 195 (291)
T ss_pred eecccCCHHHEEEcC--CCCEEECccccccccCCCCcccc-c-----cccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence 999999999999986 88999999999876532211100 0 011334555665432 33456679999987776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 196 ~l~~ 199 (291)
T cd07844 196 EMAT 199 (291)
T ss_pred HHHh
Confidence 6653
No 277
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.32 E-value=1.2e-11 Score=132.50 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=120.5
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|+||+|+. .+..||||+.+...... .
T Consensus 41 ~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~-----------------------------------~---- 81 (302)
T cd05055 41 KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSS-----------------------------------E---- 81 (302)
T ss_pred ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChH-----------------------------------H----
Confidence 6899999999999975 24689999874432111 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYL 447 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l 447 (766)
.-++.+|...+.++. +++++ .+.. +.......+++|||+.|++|.++..... ...+...+.....+ ..+
T Consensus 82 --~~~~~~E~~~l~~l~----~h~~iv~~~~-~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l 154 (302)
T cd05055 82 --REALMSELKIMSHLG----NHENIVNLLG-ACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGM 154 (302)
T ss_pred --HHHHHHHHHHHHhcc----CCCCcceEEE-EEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 013445555554442 22222 2222 2233456899999999999988754222 12444444443322 346
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHH
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 527 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~ 527 (766)
..+|..|++|+|++|.||++++ ++.++++|||++..+........ .+.......+++++....+..++..|+++
T Consensus 155 ~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws 228 (302)
T cd05055 155 AFLASKNCIHRDLAARNVLLTH--GKIVKICDFGLARDIMNDSNYVV----KGNARLPVKWMAPESIFNCVYTFESDVWS 228 (302)
T ss_pred HHHHHCCeehhhhccceEEEcC--CCeEEECCCcccccccCCCceee----cCCCCcccccCCHhhhccCCCCcHhHHHH
Confidence 7889999999999999999985 78899999999987654321100 11112345677888887777778889999
Q ss_pred HHHHHHHHH
Q 004234 528 VRRTAQFFL 536 (766)
Q Consensus 528 l~~~i~~~l 536 (766)
+...+.+++
T Consensus 229 lGvil~el~ 237 (302)
T cd05055 229 YGILLWEIF 237 (302)
T ss_pred HHHHHHHHH
Confidence 987766554
No 278
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.32 E-value=8.9e-12 Score=133.21 Aligned_cols=184 Identities=13% Similarity=0.134 Sum_probs=115.2
Q ss_pred ccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+.||+|++|+||+|++ +|+ .||+|+..+.....
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------------- 51 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK----------------------------------------- 51 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHH-----------------------------------------
Confidence 5799999999999998 454 57888764332111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQ 449 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~q 449 (766)
....+.+|...+..+ ++++ +.+...+ ......++|||++++.+.+........++...+.... +...+..
T Consensus 52 ~~~~~~~e~~~~~~l-----~h~niv~~~~~~--~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 124 (303)
T cd05110 52 ANVEFMDEALIMASM-----DHPHLVRLLGVC--LSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMY 124 (303)
T ss_pred HHHHHHHHHHHHHhC-----CCCCcccEEEEE--cCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 011244455444443 1233 2222222 2345689999999999988654322233433333322 2234678
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..|++|+|+||.||+++. ++.++|+|||++..+.......... .......+++++.......+...|++++.
T Consensus 125 LH~~~ivH~dikp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~----~~~~~~~y~~PE~~~~~~~~~~~DiwslG 198 (303)
T cd05110 125 LEERRLVHRDLAARNVLVKS--PNHVKITDFGLARLLEGDEKEYNAD----GGKMPIKWMALECIHYRKFTHQSDVWSYG 198 (303)
T ss_pred HhhcCeeccccccceeeecC--CCceEEccccccccccCcccccccC----CCccccccCCHHHhccCCCChHHHHHHHH
Confidence 89999999999999999975 7899999999998775433211000 01112356667776656666778999998
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
..+.+++
T Consensus 199 ~~l~el~ 205 (303)
T cd05110 199 VTIWELM 205 (303)
T ss_pred HHHHHHH
Confidence 7666554
No 279
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.32 E-value=1.6e-11 Score=129.60 Aligned_cols=186 Identities=18% Similarity=0.099 Sum_probs=115.6
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..||.|++|+||+|.. ++..||+|+.+.+....
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~---------------------------------------- 50 (288)
T cd05050 11 RDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD---------------------------------------- 50 (288)
T ss_pred ccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHH----------------------------------------
Confidence 5799999999999986 35789999874332111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------------
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE--------------------- 430 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~--------------------- 430 (766)
.+-+|.+|...+.++ +++++.-..-+.......+++|||++|++|.+......
T Consensus 51 -~~~~~~~ei~~l~~l-----~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (288)
T cd05050 51 -MQADFQREAALMAEF-----DHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNP 124 (288)
T ss_pred -HHHHHHHHHHHHHhc-----CCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccc
Confidence 011344454444443 22332222222233456799999999999988653211
Q ss_pred cCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHH
Q 004234 431 LGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADK 508 (766)
Q Consensus 431 ~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~ 508 (766)
..++...+...+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++..+....-.. . .........+
T Consensus 125 ~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~---~-~~~~~~~~~y 198 (288)
T cd05050 125 LPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGE--NMVVKIADFGLSRNIYSADYYK---A-SENDAIPIRW 198 (288)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecC--CCceEECccccceecccCcccc---c-cCCCccChhh
Confidence 11222223333222 2367889999999999999999985 8899999999987653321100 0 0000113457
Q ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 509 VLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 509 v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
++++....+..+...|++++...+.+++
T Consensus 199 ~aPE~~~~~~~~~~~Dv~slG~il~el~ 226 (288)
T cd05050 199 MPPESIFYNRYTTESDVWAYGVVLWEIF 226 (288)
T ss_pred cCHHHHhcCCCCchhHHHHHHHHHHHHH
Confidence 7788777677777889999987766554
No 280
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.32 E-value=1.7e-11 Score=129.63 Aligned_cols=188 Identities=16% Similarity=0.166 Sum_probs=116.2
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|.||.|+. +|+.||+|+.+...... . ....+
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~----------------------------~----~~~~~---- 49 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQ----------------------------K----AKTTE---- 49 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhh----------------------------c----chHHH----
Confidence 5689999999999986 48999999874321100 0 00011
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~ 451 (766)
.+.+|.+.+.++. +++++.-....-+.....+++|||++|++|.+..... ..+....+...+ +...+..+|
T Consensus 50 --~~~~e~~~l~~l~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH 122 (290)
T cd05613 50 --HTRTERQVLEHIR----QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLH 122 (290)
T ss_pred --HHHHHHHHHHhcc----cCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 1223433333332 2233222222222345568999999999998865322 234444444333 233478899
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCCHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVR 529 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG--~~~~~~D~~~l~ 529 (766)
..|++|+|++|.||+++. +++++++|||++..+......... ...+...+++++...-+ ......|++++.
T Consensus 123 ~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (290)
T cd05613 123 KLGIIYRDIKLENILLDS--NGHVVLTDFGLSKEFHEDEVERAY-----SFCGTIEYMAPDIVRGGDGGHDKAVDWWSMG 195 (290)
T ss_pred hCCeeccCCCHHHeEECC--CCCEEEeeCccceecccccccccc-----cccCCcccCChhhccCCCCCCCccccHHHHH
Confidence 999999999999999986 889999999999877543211110 11234556667766432 245678999998
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
..+.+++
T Consensus 196 ~~l~~ll 202 (290)
T cd05613 196 VLMYELL 202 (290)
T ss_pred HHHHHHh
Confidence 7766554
No 281
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.32 E-value=1.6e-11 Score=137.97 Aligned_cols=85 Identities=14% Similarity=0.066 Sum_probs=60.7
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCH
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDT 525 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~ 525 (766)
.+..+|..|++|+|++|.||++++ ++.++++|||++..+........ .........+++++....+...+..|+
T Consensus 251 aL~~LH~~~ivHrdlkp~NiLl~~--~~~~kL~DfGla~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 251 GMEFLASKNCVHRDLAARNVLICE--GKLVKICDFGLARDIMRDSNYIS----KGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred HHHHHhcCCcCcccCCcceEEEeC--CCEEEEEecCcceeccccccccc----CCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 367789999999999999999986 78999999999986533211000 000112345677887777777778899
Q ss_pred HHHHHHHHHHH
Q 004234 526 TAVRRTAQFFL 536 (766)
Q Consensus 526 ~~l~~~i~~~l 536 (766)
+++...+.+++
T Consensus 325 wslGvil~e~l 335 (401)
T cd05107 325 WSFGILLWEIF 335 (401)
T ss_pred HHHHHHHHHHH
Confidence 99987666554
No 282
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.32 E-value=2.2e-11 Score=128.64 Aligned_cols=188 Identities=15% Similarity=0.130 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|+||+|+. +|+.||||+.+...... . .+ .
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~----------------------------~----~~------~ 47 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ----------------------------K----AK------T 47 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh----------------------------h----hh------H
Confidence 5799999999999986 36889999874210000 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~ 451 (766)
.-.+.+|...+.++. +++++.............++||||++|++|.+.... ...++...+...+. ...+..+|
T Consensus 48 ~~~~~~E~~~l~~~~----~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH 122 (288)
T cd05583 48 AEHTRTERQVLEAVR----RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLH 122 (288)
T ss_pred HHHHHHHHHHHHhcc----CCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHH
Confidence 112334444444332 233332222222334567899999999999876432 12234343333222 23467889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC--CCCCCCHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV--LVPTGDTTAVR 529 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~--~~~~~D~~~l~ 529 (766)
..|++|+|+||.||+++. ++.++++|||++..+....... .....++..+++++....+. .....|++++.
T Consensus 123 ~~~~~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG 195 (288)
T cd05583 123 QLGIIYRDIKLENILLDS--EGHVVLTDFGLSKEFLAEEEER-----AYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLG 195 (288)
T ss_pred HCCeeccCCCHHHeEECC--CCCEEEEECccccccccccccc-----cccccCCccccCHHHhcCCCCCCcchhhhHHHH
Confidence 999999999999999986 7899999999988765432110 01123456677777765443 45678999988
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
..+.+++
T Consensus 196 ~il~el~ 202 (288)
T cd05583 196 VLTFELL 202 (288)
T ss_pred HHHHHHH
Confidence 7766554
No 283
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.31 E-value=1.6e-11 Score=131.56 Aligned_cols=189 Identities=14% Similarity=0.125 Sum_probs=112.8
Q ss_pred CcccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+...||.|++|.||+|+. +++.||||+....-..
T Consensus 5 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~------------------------------------------ 42 (317)
T cd07868 5 EGCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS------------------------------------------ 42 (317)
T ss_pred cccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc------------------------------------------
Confidence 346799999999999996 3578999976321000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhh--------cCCCHHHHHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDE--------LGVDRKRLGRYAV 443 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~--------~g~d~~~la~~lv 443 (766)
.+..+|++.+.++ .+..-+.+..++... ....+++|||+++ .+.++..... ..++...+...+.
T Consensus 43 --~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 115 (317)
T cd07868 43 --MSACREIALLREL----KHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLY 115 (317)
T ss_pred --HHHHHHHHHHHhc----CCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHH
Confidence 0122344444443 222223333333322 2345899999976 5555432111 1122222222222
Q ss_pred --HHHHHHHHhCCccccCCCCCcEEEee--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CC
Q 004234 444 --ESYLEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GV 518 (766)
Q Consensus 444 --~~~l~qI~~~GffHaDpHPGNILV~~--~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~ 518 (766)
-..+..+|..|++|+|+||.||++.. ..++.++|+|||++..++..... ... ..-..++..++++++... ..
T Consensus 116 qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~-~~~--~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07868 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LAD--LDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc-ccc--cCCccccccccCCHHHcCCCC
Confidence 23467889999999999999999952 13578999999999877543211 000 001123556788887654 33
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l~ 537 (766)
.+...|++++...+.+++.
T Consensus 193 ~~~~~DiwslG~il~el~~ 211 (317)
T cd07868 193 YTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred cCchhhHHHHHHHHHHHHh
Confidence 5667899999987766653
No 284
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.7e-12 Score=139.76 Aligned_cols=181 Identities=22% Similarity=0.270 Sum_probs=105.9
Q ss_pred CcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.+.+|+||||.||+|.+ ++++||||-.-|+-+-. . +|
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-n---------------------------------------rE 67 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-N---------------------------------------RE 67 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-c---------------------------------------HH
Confidence 346899999999999999 58999999664432211 1 12
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCC----eEEEEeecCCCChhhhhhh-h--hcCCC---HHHHHHHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTP----QILTMEYVPGIKINRIQSL-D--ELGVD---RKRLGRYAV 443 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~----~vLVMEyieG~~L~d~~~l-~--~~g~d---~~~la~~lv 443 (766)
+.+++ .. ++++| ..-..|...++. .-||||||+- +|.+.... . ....+ -+-....++
T Consensus 68 l~im~----------~l-~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlf 135 (364)
T KOG0658|consen 68 LQIMR----------KL-DHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLF 135 (364)
T ss_pred HHHHH----------hc-CCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHH
Confidence 22222 11 23332 222222222222 2589999974 45554331 0 11222 222222222
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCC
Q 004234 444 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTG 523 (766)
Q Consensus 444 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~ 523 (766)
..+..+|.+|+.|||+||.||||++ ..|.++|+|||.++.+.+.... ...++.-.-+-|+ .+...--.+...
T Consensus 136 -rgl~yLh~~~IcHRDIKPqNlLvD~-~tg~LKicDFGSAK~L~~~epn--iSYicSRyYRaPE----Lifga~~Yt~~I 207 (364)
T KOG0658|consen 136 -RGLAYLHSHGICHRDIKPQNLLVDP-DTGVLKICDFGSAKVLVKGEPN--ISYICSRYYRAPE----LIFGATEYTTSI 207 (364)
T ss_pred -HHHHHHHhcCcccCCCChheEEEcC-CCCeEEeccCCcceeeccCCCc--eeEEEeccccCHH----HHcCccccCcee
Confidence 2367788999999999999999996 5699999999999999776543 1111111122222 223333345667
Q ss_pred CHHHHHHHHHHHHH
Q 004234 524 DTTAVRRTAQFFLN 537 (766)
Q Consensus 524 D~~~l~~~i~~~l~ 537 (766)
|+++..-.+.+++.
T Consensus 208 DiWSaGCV~aELl~ 221 (364)
T KOG0658|consen 208 DIWSAGCVMAELLK 221 (364)
T ss_pred EEhhhhHHHHHHhc
Confidence 88888777666553
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.31 E-value=1e-11 Score=130.46 Aligned_cols=182 Identities=14% Similarity=0.182 Sum_probs=114.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|+||+|+. +|+.||+|+....-.. .-+
T Consensus 22 ~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~-------------------------------------------~~~ 58 (282)
T cd06636 22 EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDE-------------------------------------------EEE 58 (282)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHH-------------------------------------------HHH
Confidence 5799999999999999 5899999987321000 011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec--------cCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE--------YTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VES 445 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e--------~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~l--v~~ 445 (766)
+..|...+.++. +++++ .+.+.. .....+++|||++|++|.++..... ...+...+...+ +..
T Consensus 59 ~~~e~~~l~~~~----~h~~i--~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~ 132 (282)
T cd06636 59 IKLEINMLKKYS----HHRNI--ATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR 132 (282)
T ss_pred HHHHHHHHHHhc----CCCcE--EEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHH
Confidence 223333333332 22222 222211 1345689999999999998654322 223333333222 233
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCCC
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVLV 520 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~~~ 520 (766)
.+..+|..|++|+|++|.||++++ ++.++|+|||++..+....... ....++..+++++.+.. ...+
T Consensus 133 al~~LH~~~ivH~dl~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~l~~~~~~~~~~~ 204 (282)
T cd06636 133 GLAHLHAHKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDRTVGRR------NTFIGTPYWMAPEVIACDENPDATYD 204 (282)
T ss_pred HHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCcchhhhhccccCC------CcccccccccCHhhcCcccCcCcCCC
Confidence 467889999999999999999986 8899999999988664322110 11234566777877642 2234
Q ss_pred CCCCHHHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~l~ 537 (766)
...|++++...+.+++.
T Consensus 205 ~~~DvwslG~~l~el~~ 221 (282)
T cd06636 205 YRSDIWSLGITAIEMAE 221 (282)
T ss_pred cccchhHHHHHHHHHHh
Confidence 56899999887766653
No 286
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.31 E-value=1.6e-11 Score=127.20 Aligned_cols=183 Identities=12% Similarity=0.059 Sum_probs=117.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||.|++|.||+|.. +++.|++|+.+...... .-++
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~------------------------------------------~~~~ 49 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLK------------------------------------------QQDF 49 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhh------------------------------------------HHHH
Confidence 5689999999999999 68999999863221100 0023
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
..|...+..+. ++++.-..-+.......+++|||++|++|.+...... ...+...+...+.+ ..+..+|..|
T Consensus 50 ~~e~~~l~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 124 (261)
T cd05148 50 QKEVQALKRLR-----HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN 124 (261)
T ss_pred HHHHHHHhcCC-----CcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 33333333331 1222111112233456799999999999998754221 22344444333322 2367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.+++.|||.+..+....... .-......++.++....+..+...|++++...+.+
T Consensus 125 i~h~dl~~~nilv~~--~~~~kl~d~g~~~~~~~~~~~~------~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~ 196 (261)
T cd05148 125 SIHRDLAARNILVGE--DLVCKVADFGLARLIKEDVYLS------SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196 (261)
T ss_pred eeccccCcceEEEcC--CceEEEccccchhhcCCccccc------cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 8899999999998775432110 01122345667777777777778899999877666
Q ss_pred HH
Q 004234 535 FL 536 (766)
Q Consensus 535 ~l 536 (766)
++
T Consensus 197 l~ 198 (261)
T cd05148 197 MF 198 (261)
T ss_pred HH
Confidence 54
No 287
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.31 E-value=2.1e-11 Score=130.94 Aligned_cols=185 Identities=16% Similarity=0.127 Sum_probs=117.2
Q ss_pred ccccccceeEEEEEee---------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL---------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l---------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 369 (766)
+.||.|++|.||+|+. ++..||+|+.+......
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~-------------------------------------- 59 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDK-------------------------------------- 59 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChH--------------------------------------
Confidence 6899999999999975 24579999875432111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhh---------------cC
Q 004234 370 VLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDE---------------LG 432 (766)
Q Consensus 370 ~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~---------------~g 432 (766)
..-++..|.+-+..+ .++++| .+.+. ......+++|||++|++|.++..... ..
T Consensus 60 ---~~~~~~~E~~~l~~l----~~h~~i--v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (314)
T cd05099 60 ---DLADLISEMELMKLI----GKHKNI--INLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130 (314)
T ss_pred ---HHHHHHHHHHHHHhc----cCCCCe--eeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence 001233343333222 223332 22322 23456799999999999998753211 11
Q ss_pred CCHHHHHHHHH--HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHH
Q 004234 433 VDRKRLGRYAV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVL 510 (766)
Q Consensus 433 ~d~~~la~~lv--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~ 510 (766)
++...+...+. ...+..+|..|++|+|++|+||++++ ++.++|+|||.+..+........ . ........+++
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~--~--~~~~~~~~y~a 204 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTE--DNVMKIADFGLARGVHDIDYYKK--T--SNGRLPVKWMA 204 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcC--CCcEEEccccccccccccccccc--c--ccCCCCccccC
Confidence 33333333222 23467889999999999999999986 88999999999987754321110 0 01122345788
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 511 QAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 511 ~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
++....+..+...|++++...+.+++
T Consensus 205 PE~~~~~~~~~~~DiwslG~~l~el~ 230 (314)
T cd05099 205 PEALFDRVYTHQSDVWSFGILMWEIF 230 (314)
T ss_pred HHHHccCCcCccchhhHHHHHHHHHH
Confidence 88887777778899999987766554
No 288
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.31 E-value=2.6e-11 Score=132.74 Aligned_cols=189 Identities=18% Similarity=0.229 Sum_probs=117.0
Q ss_pred hhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHH
Q 004234 292 VFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECA 368 (766)
Q Consensus 292 iF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~ 368 (766)
+...|.. +.||.|++|.||+|+. +|+.||||+..-..... .
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------------------~------ 57 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV------------------------------T------ 57 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh------------------------------h------
Confidence 3344443 7899999999999998 69999999762111000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH
Q 004234 369 SVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV 443 (766)
Q Consensus 369 ~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv 443 (766)
....+.+|...+.++. +..-+.+..++. +.....++||||++| .+.+.... .++...+...+.
T Consensus 58 ----~~~~~~~E~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~ 125 (353)
T cd07850 58 ----HAKRAYRELVLMKLVN----HKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---DLDHERMSYLLY 125 (353)
T ss_pred ----HHHHHHHHHHHHHhcC----CCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhh---cCCHHHHHHHHH
Confidence 0011223444444332 211122222221 111246999999987 45553321 144444333322
Q ss_pred --HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC
Q 004234 444 --ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP 521 (766)
Q Consensus 444 --~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~ 521 (766)
-..+..+|..|++|+|++|+||+++. ++.++|+|||++..+...... ....+...++++++........
T Consensus 126 ql~~aL~~LH~~gi~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~ 196 (353)
T cd07850 126 QMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTLKILDFGLARTAGTSFMM-------TPYVVTRYYRAPEVILGMGYKE 196 (353)
T ss_pred HHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEccCccceeCCCCCCC-------CCCcccccccCHHHHhCCCCCC
Confidence 23478899999999999999999986 889999999999877553221 0112345567788777666778
Q ss_pred CCCHHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFLN 537 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l~ 537 (766)
..|++++...+.+++.
T Consensus 197 ~~DvwslG~~l~~l~~ 212 (353)
T cd07850 197 NVDIWSVGCIMGEMIR 212 (353)
T ss_pred chhhHhHHHHHHHHHH
Confidence 8899999987776653
No 289
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.31 E-value=2.6e-11 Score=129.66 Aligned_cols=182 Identities=20% Similarity=0.195 Sum_probs=114.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|.||+|+. +|+.||+|+........ .+ ..-+
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~---------------------------------~~------~~~~ 61 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS---------------------------------NE------KWQD 61 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc---------------------------------HH------HHHH
Confidence 4699999999999998 58999999873221100 00 0113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+.+|...+..+ .+..-+.+..++ ......++||||++|. +.+.........+...+...+ +-..+..+|..|
T Consensus 62 ~~~Ei~~l~~l----~h~niv~~~~~~-~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~ 135 (307)
T cd06607 62 IIKEVRFLQQL----RHPNTIEYKGCY-LREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE 135 (307)
T ss_pred HHHHHHHHHhC----CCCCEEEEEEEE-EeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34444433333 222222333333 2345679999999874 444332222234444443332 223467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cCCCCCCCCHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRRT 531 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~---lG~~~~~~D~~~l~~~ 531 (766)
++|+|++|+||++++ ++.+++.|||++...++... ..+.+.++++++.. .+..+...|++++...
T Consensus 136 i~H~dl~p~nIl~~~--~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~i 203 (307)
T cd06607 136 RIHRDIKAGNILLTE--PGTVKLADFGSASLVSPANS----------FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203 (307)
T ss_pred ceecCCCcccEEECC--CCCEEEeecCcceecCCCCC----------ccCCccccCceeeeccCCCCCCcccchHHHHHH
Confidence 999999999999986 88999999999987654321 12445566776552 3455677899999877
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 204 l~el~t 209 (307)
T cd06607 204 CIELAE 209 (307)
T ss_pred HHHHHc
Confidence 766543
No 290
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.31 E-value=4.7e-11 Score=128.51 Aligned_cols=193 Identities=18% Similarity=0.191 Sum_probs=120.4
Q ss_pred hCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004234 285 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (766)
Q Consensus 285 lG~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~ 362 (766)
++..++++|..+. .+|.|++|.||+|+. +|+.|++|+........ .
T Consensus 15 ~~~~~~~~~~~~~--~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~-----------------------------~- 62 (313)
T cd06633 15 YKDDPEEIFVGLH--EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT-----------------------------N- 62 (313)
T ss_pred ccCCHHHHhhcce--eeccCCCeEEEEEEECCCCcEEEEEEEeccccCc-----------------------------h-
Confidence 3466777766554 499999999999998 58999999873321100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH
Q 004234 363 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA 442 (766)
Q Consensus 363 i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l 442 (766)
+ ...++..|...+..+. +..-+.+..++ ......+++|||+.| .+.+........++...+...+
T Consensus 63 --~-------~~~~~~~E~~~l~~l~----h~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~ 127 (313)
T cd06633 63 --E-------KWQDIIKEVKFLQQLK----HPNTIEYKGCY-LKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAIT 127 (313)
T ss_pred --H-------HHHHHHHHHHHHHhCC----CCCCccEEEEE-EeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHH
Confidence 0 0112344444444432 22222333333 224567999999987 4544432222334444444333
Q ss_pred --HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cC
Q 004234 443 --VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MG 517 (766)
Q Consensus 443 --v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~---lG 517 (766)
+-..+..+|..|++|+|++|+||+++. ++.++++|||++....+... ..++..++++++.. -+
T Consensus 128 ~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~ 195 (313)
T cd06633 128 HGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSASKSSPANS----------FVGTPYWMAPEVILAMDEG 195 (313)
T ss_pred HHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCCcccCCCCC----------ccccccccChhhccccCCC
Confidence 223467889999999999999999985 78999999998865433211 12445577777763 24
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q 004234 518 VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 518 ~~~~~~D~~~l~~~i~~~l 536 (766)
......|++++...+.+++
T Consensus 196 ~~~~~sDv~slGvil~el~ 214 (313)
T cd06633 196 QYDGKVDVWSLGITCIELA 214 (313)
T ss_pred CCCchhhHHHHHHHHHHHH
Confidence 4566789999987766554
No 291
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.31 E-value=3.3e-11 Score=126.64 Aligned_cols=118 Identities=16% Similarity=0.191 Sum_probs=88.1
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCccccCCCCCcEEEeecCCC-cEEEEeecce
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHADPHPGNIAVDDVNGG-RLIFYDFGMM 483 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~GffHaDpHPGNILV~~~~~g-~l~LiDFGlv 483 (766)
....++||||++|++|.++..... .++...+...+.+. .+..+|..|++|+|++|.||+++. ++ +++++|||++
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~l~dfg~~ 157 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR--AKDRIYLCDYGLC 157 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC--CCCeEEEecCccc
Confidence 456799999999999988754322 44555544444332 368899999999999999999986 55 8999999999
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 484 GSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 484 ~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
..++.... ..+...+++++....+..++..|++++...+.+++.
T Consensus 158 ~~~~~~~~----------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~ 201 (267)
T PHA03390 158 KIIGTPSC----------YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLT 201 (267)
T ss_pred eecCCCcc----------CCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHH
Confidence 87764321 235667788888877777778899999877766553
No 292
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=99.31 E-value=3.1e-11 Score=124.37 Aligned_cols=99 Identities=28% Similarity=0.557 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHH-hcCC--CCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004234 378 TQEAANAELFAS-NFKD--MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~-~f~~--~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~G 454 (766)
.++..|+.+.+. -|.. ++.+..-+-.+.+++..+|+||||+|.++++...+. ..++..+. ..++++|.+|
T Consensus 83 ~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~i~------e~~~~ki~-~~ikqlH~~G 155 (229)
T PF06176_consen 83 SRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIEDID------EDLAEKIV-EAIKQLHKHG 155 (229)
T ss_pred HHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEecCeecccchhcC------HHHHHHHH-HHHHHHHHcC
Confidence 344445555543 2222 223444455567888899999999999999875432 13444444 4689999999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
++|+||||||++++ ++.++++||+..+..
T Consensus 156 ~~HGD~hpgNFlv~---~~~i~iID~~~k~~~ 184 (229)
T PF06176_consen 156 FYHGDPHPGNFLVS---NNGIRIIDTQGKRMS 184 (229)
T ss_pred CccCCCCcCcEEEE---CCcEEEEECcccccc
Confidence 99999999999997 566999999988864
No 293
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.31 E-value=1.7e-11 Score=128.83 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=112.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.||+|+..+.... .-+
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-------------------------------------------~~~ 60 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI-------------------------------------------DEE 60 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccccch-------------------------------------------HHH
Confidence 6899999999999998 5899999986431100 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec-------cCCCeEEEEeecCCCChhhhhhh--h-hcCCCHHHHHHHH--HH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE-------YTTPQILTMEYVPGIKINRIQSL--D-ELGVDRKRLGRYA--VE 444 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-------~st~~vLVMEyieG~~L~d~~~l--~-~~g~d~~~la~~l--v~ 444 (766)
+.+|...+.++. ++++ +++++.. -....+++|||++|++|.++... . ....+...+...+ +-
T Consensus 61 ~~~e~~~l~~l~----~h~~--i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~ 134 (286)
T cd06638 61 IEAEYNILKALS----DHPN--VVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEAL 134 (286)
T ss_pred HHHHHHHHHHHh----cCCC--eeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHH
Confidence 223333333332 1222 2333221 12346999999999999886431 1 1123333222222 22
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GVL 519 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~~ 519 (766)
..+..+|..|++|+|++|+||++++ ++.++++|||++..+....... ....++..+++++.... +..
T Consensus 135 ~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~ 206 (286)
T cd06638 135 MGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQLDSTY 206 (286)
T ss_pred HHHHHHHhCCccccCCCHHhEEECC--CCCEEEccCCceeecccCCCcc------ccccCCCcccChhhhchhhhccccc
Confidence 3467889999999999999999986 7889999999988775432110 11124556677776542 234
Q ss_pred CCCCCHHHHHHHHHHHH
Q 004234 520 VPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 520 ~~~~D~~~l~~~i~~~l 536 (766)
+...|++++...+.+++
T Consensus 207 ~~~~Dv~slGvi~~el~ 223 (286)
T cd06638 207 DARCDVWSLGITAIELG 223 (286)
T ss_pred cchhhhhhHHHHHHHHh
Confidence 56789998887665543
No 294
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.30 E-value=2e-11 Score=129.23 Aligned_cols=185 Identities=14% Similarity=0.103 Sum_probs=114.4
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|.||+|+.. +..|++|+...+....
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~---------------------------------------- 45 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSS---------------------------------------- 45 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHH----------------------------------------
Confidence 57899999999999872 2578999774332110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh--------------------
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------------------- 430 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------------------- 430 (766)
..-++.+|..-+..+ . ++++ .+...+ ...+..+++|||++|++|.++.....
T Consensus 46 -~~~~~~~E~~~l~~l----~-h~~iv~~~~~~-~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 118 (290)
T cd05045 46 -ELRDLLSEFNLLKQV----N-HPHVIKLYGAC-SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118 (290)
T ss_pred -HHHHHHHHHHHHhhC----C-CCCEeeEEEEE-ecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccC
Confidence 011344454444433 2 2332 222222 34566899999999999988643210
Q ss_pred ---cCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcC
Q 004234 431 ---LGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKD 505 (766)
Q Consensus 431 ---~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D 505 (766)
..++...+...+.+ ..+..+|..|++|+|++|.||++++ ++.++|+|||++..+...... ... ......
T Consensus 119 ~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~--~~~~kl~dfg~~~~~~~~~~~--~~~--~~~~~~ 192 (290)
T cd05045 119 PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAE--GRKMKISDFGLSRDVYEEDSY--VKR--SKGRIP 192 (290)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcC--CCcEEeccccccccccCccch--hcc--cCCCCC
Confidence 01222333333222 3368889999999999999999986 789999999998876433211 000 011123
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 506 ADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 506 ~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
..+++++...-...+...|++++...+.+++
T Consensus 193 ~~y~apE~~~~~~~~~~~Di~slG~~l~el~ 223 (290)
T cd05045 193 VKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 223 (290)
T ss_pred ccccCHHHHccCCcchHhHHHHHHHHHHHHH
Confidence 4566677665556677789999887766554
No 295
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.30 E-value=5.7e-11 Score=127.44 Aligned_cols=193 Identities=18% Similarity=0.201 Sum_probs=122.2
Q ss_pred hCCChhhhhhccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004234 285 LGAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (766)
Q Consensus 285 lG~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~ 362 (766)
+...++..|... ..+|.|++|+||+|+. +|+.|+||..+..-...
T Consensus 9 ~~~~~~~~~~~~--~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~------------------------------- 55 (308)
T cd06634 9 FKDDPEKLFSDL--REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS------------------------------- 55 (308)
T ss_pred hcCCcHHHHHHH--HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC-------------------------------
Confidence 344455555533 5699999999999998 58999999764311000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH
Q 004234 363 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA 442 (766)
Q Consensus 363 i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l 442 (766)
.+ ..-++..|.+.+..+. +...+.+...+ ......++||||+.| ++.+........++...+...+
T Consensus 56 --~~------~~~~~~~e~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~ 121 (308)
T cd06634 56 --NE------KWQDIIKEVRFLQKLR----HPNTIQYRGCY-LREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVT 121 (308)
T ss_pred --hH------HHHHHHHHHHHHHhCC----CCCcccEEEEE-EcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHH
Confidence 00 0113344554444432 22222222222 234667999999986 5665443333334555544433
Q ss_pred HH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH---cC
Q 004234 443 VE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ---MG 517 (766)
Q Consensus 443 v~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~---lG 517 (766)
.+ ..+..+|..|++|+|++|.||+++. ++.+++.|||++..+.+... ..++..+++++... .+
T Consensus 122 ~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~----------~~~~~~y~aPE~~~~~~~~ 189 (308)
T cd06634 122 HGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGSASIMAPANX----------FVGTPYWMAPEVILAMDEG 189 (308)
T ss_pred HHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCcccceeecCccc----------ccCCccccCHHHHhhcccC
Confidence 32 3467889999999999999999985 88999999999887765321 12455677777753 24
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q 004234 518 VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 518 ~~~~~~D~~~l~~~i~~~l 536 (766)
..+...|++++...+.+++
T Consensus 190 ~~~~~~Di~slG~il~el~ 208 (308)
T cd06634 190 QYDGKVDVWSLGITCIELA 208 (308)
T ss_pred CCCcccchHHHHHHHHHHH
Confidence 4566789999987766554
No 296
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.30 E-value=3.2e-11 Score=127.52 Aligned_cols=183 Identities=15% Similarity=0.135 Sum_probs=114.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|.||+|.. +|+.||+|+..+.-. . .. +
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~------------------------------~-------~~------~ 64 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD------------------------------V-------DE------E 64 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEeccccc------------------------------H-------HH------H
Confidence 5799999999999998 589999998743200 0 00 1
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeec----cCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHHH--HHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWE----YTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYAV--ESY 446 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l---~~~g~d~~~la~~lv--~~~ 446 (766)
+..|...+.++. +++++ .+...+.. .....++||||++|++|.++... .........+...+. -..
T Consensus 65 ~~~e~~~l~~l~----~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~a 140 (291)
T cd06639 65 IEAEYNILQSLP----NHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLG 140 (291)
T ss_pred HHHHHHHHHHhc----CCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHH
Confidence 223333333332 22222 22222221 12357999999999999886531 112233333333322 234
Q ss_pred HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-----CCC
Q 004234 447 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-----LVP 521 (766)
Q Consensus 447 l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~-----~~~ 521 (766)
+..+|..|++|+|++|+||+++. ++.++++|||.+..+....... ....+...+++++....+. .+.
T Consensus 141 l~~lH~~~ivH~dlkp~nili~~--~~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~~ 212 (291)
T cd06639 141 LQHLHNNRIIHRDVKGNNILLTT--EGGVKLVDFGVSAQLTSTRLRR------NTSVGTPFWMAPEVIACEQQYDYSYDA 212 (291)
T ss_pred HHHHHhCCeeccCCCHHHEEEcC--CCCEEEeecccchhcccccccc------cCccCCccccChhhhcCCCCcccccCC
Confidence 67889999999999999999986 8899999999988765432111 1122455667777765432 356
Q ss_pred CCCHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFL 536 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l 536 (766)
..|++++...+.+++
T Consensus 213 ~~Di~slGvi~~el~ 227 (291)
T cd06639 213 RCDVWSLGITAIELG 227 (291)
T ss_pred ccchHHHHHHHHHHh
Confidence 789999987766554
No 297
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.30 E-value=7.6e-12 Score=131.46 Aligned_cols=184 Identities=16% Similarity=0.154 Sum_probs=112.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|.||+|+. +|+.||+|+.+...... +. +-+
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~----------------------------------~~------~~~ 45 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE----------------------------------GV------PSS 45 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccc----------------------------------cC------ccc
Confidence 5699999999999999 59999999874321110 00 001
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++. + +++ .+...+ ...+..+++|||++| ++.+.........+...+...+.+ ..+..+|..
T Consensus 46 ~~~ei~~l~~l~----h-~~i~~~~~~~-~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~ 118 (284)
T cd07839 46 ALREICLLKELK----H-KNIVRLYDVL-HSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH 118 (284)
T ss_pred hhHHHHHHHhcC----C-CCeeeHHHHh-ccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222333333321 1 211 111111 224567999999987 555543222223454444443333 337788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i 532 (766)
|++|+|+||+||+++. ++.++|+|||++..+....+.. ....++..++++++...+ ..++..|++++...+
T Consensus 119 ~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 190 (284)
T cd07839 119 NVLHRDLKPQNLLINK--NGELKLADFGLARAFGIPVRCY------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 190 (284)
T ss_pred CEecCCCCHHHEEEcC--CCcEEECccchhhccCCCCCCc------CCCccccCCcChHHHhCCcccCcHHHHHHHHHHH
Confidence 9999999999999986 8899999999988664432110 011234456677766433 346678999998777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 191 ~~l~t 195 (284)
T cd07839 191 AELAN 195 (284)
T ss_pred HHHHh
Confidence 76653
No 298
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.30 E-value=2.5e-11 Score=126.41 Aligned_cols=188 Identities=15% Similarity=0.079 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||.|.. +|+.|+||+.+...... +.. . .--.
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~---------------------------~~~---~-------~~~~ 50 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESP---------------------------ETS---K-------EVNA 50 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCc---------------------------ccH---H-------HHHH
Confidence 5799999999999998 58999999864321110 000 0 0013
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc----CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY----TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~----st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI 450 (766)
+.+|++.+.++. ++++ ++.+..+ ....+++|||++|++|.+..... ...+.......+ +...+..+
T Consensus 51 ~~~E~~~l~~l~-----h~~i--~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~l 122 (265)
T cd06652 51 LECEIQLLKNLL-----HERI--VQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYL 122 (265)
T ss_pred HHHHHHHHHhcC-----CCCe--eeEEeEeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH
Confidence 445666555542 2222 2222211 23457999999999998864321 123333322222 22346788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|++|.||+++. ++.++|+|||+...+....... .. .....+...+++++.......++..|++++..
T Consensus 123 H~~~i~H~dl~p~nil~~~--~~~~~l~Dfg~~~~~~~~~~~~-~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 197 (265)
T cd06652 123 HSNMIVHRDIKGANILRDS--VGNVKLGDFGASKRLQTICLSG-TG--MKSVTGTPYWMSPEVISGEGYGRKADIWSVGC 197 (265)
T ss_pred HhCCEecCCCCHHHEEecC--CCCEEECcCccccccccccccc-cc--cccCCCCccccChhhhcCCCCCcchhHHHHHH
Confidence 9999999999999999985 8899999999988664321100 00 00112445677787776666677889999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 198 il~el~ 203 (265)
T cd06652 198 TVVEML 203 (265)
T ss_pred HHHHHh
Confidence 776655
No 299
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.30 E-value=1.8e-11 Score=129.76 Aligned_cols=188 Identities=16% Similarity=0.135 Sum_probs=116.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.|+||..+......- .++. +-.
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~-------------------------------~~~~------~~~ 48 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEA-------------------------------KDGI------NFT 48 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccc-------------------------------cchh------hHH
Confidence 4699999999999998 589999998854332110 0001 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+..|...+.++. +..-+.+...+. .....++||||+ +++|.++.......++...+...+.+ ..+..+|..|
T Consensus 49 ~~~e~~~l~~~~----h~~i~~~~~~~~-~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ 122 (298)
T cd07841 49 ALREIKLLQELK----HPNIIGLLDVFG-HKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW 122 (298)
T ss_pred HHHHHHHHhhcC----CCCChhhhheee-cCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 233444444332 222223333332 245679999999 88888865432223454444433322 3467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|+||+++. ++.++|+|||++..+....... .....+..++++++... ...+...|++++...+.
T Consensus 123 i~H~dl~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 194 (298)
T cd07841 123 ILHRDLKPNNLLIAS--DGVLKLADFGLARSFGSPNRKM------THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFA 194 (298)
T ss_pred eeecCCChhhEEEcC--CCCEEEccceeeeeccCCCccc------cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 999999999999986 8999999999998775432111 00112344566666533 34456689999987776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 195 e~~~ 198 (298)
T cd07841 195 ELLL 198 (298)
T ss_pred HHHc
Confidence 6654
No 300
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.30 E-value=1.3e-11 Score=130.59 Aligned_cols=185 Identities=15% Similarity=0.051 Sum_probs=109.9
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.+.||+|++|.||+|.. +|+.|+||+.+....+. .+.
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------------------------------------~~~ 48 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-----------------------------------------VPF 48 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-----------------------------------------CcH
Confidence 36799999999999998 58999999874322111 011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
.+.+|+..+..+ . ++++.-..-+.......+++|||++|..++.+. ..........+...+ +-..+..+|..
T Consensus 49 ~~~~e~~~l~~l----~-h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 122 (291)
T cd07870 49 TAIREASLLKGL----K-HANIVLLHDIIHTKETLTFVFEYMHTDLAQYMI-QHPGGLHPYNVRLFMFQLLRGLAYIHGQ 122 (291)
T ss_pred HHHHHHHHHHhc----C-CCCEeEEEEEEecCCeEEEEEecccCCHHHHHH-hCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 223444444443 2 233322222223345679999999764333332 112223333332222 22336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|+||.||+++. ++.++|+|||++........... ....+..+++++.... ...+...|++++...+
T Consensus 123 ~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~~~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l 194 (291)
T cd07870 123 HILHRDLKPQNLLISY--LGELKLADFGLARAKSIPSQTYS------SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIF 194 (291)
T ss_pred CcccCCCChHHEEEcC--CCcEEEeccccccccCCCCCCCC------CccccccccCCceeecCCCCCcHHHHHHHHHHH
Confidence 9999999999999985 88999999999876433221100 0112444556665542 2235567999998777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 195 ~~l~~ 199 (291)
T cd07870 195 IEMLQ 199 (291)
T ss_pred HHHHh
Confidence 66543
No 301
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.30 E-value=1.3e-11 Score=130.78 Aligned_cols=185 Identities=15% Similarity=0.077 Sum_probs=118.3
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..||.|++|.||+|.. ++..|++|.......
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------------------------------------------ 48 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL------------------------------------------ 48 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH------------------------------------------
Confidence 5799999999999985 245688887632110
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDRK 436 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~~ 436 (766)
..+-+|.+|+..+.++. ++++.-..-+.......++||||++|++|.++..... ..++..
T Consensus 49 ~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (291)
T cd05094 49 AARKDFQREAELLTNLQ-----HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 123 (291)
T ss_pred HHHHHHHHHHHHHhcCC-----CCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHH
Confidence 11123455655555442 2333322223344566899999999999998754211 112333
Q ss_pred HHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004234 437 RLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 514 (766)
Q Consensus 437 ~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~ 514 (766)
.+...+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++..+........ .+...+...+++++..
T Consensus 124 ~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~dfg~a~~~~~~~~~~~----~~~~~~~~~y~aPE~~ 197 (291)
T cd05094 124 QMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA--NLLVKIGDFGMSRDVYSTDYYRV----GGHTMLPIRWMPPESI 197 (291)
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEECCCCcccccCCCceeec----CCCCCcceeecChHHh
Confidence 33333222 2367889999999999999999986 88999999999876544321111 0111224557778877
Q ss_pred HcCCCCCCCCHHHHHHHHHHHH
Q 004234 515 QMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 515 ~lG~~~~~~D~~~l~~~i~~~l 536 (766)
.....++..|++++...+.+++
T Consensus 198 ~~~~~~~~~Di~slG~il~el~ 219 (291)
T cd05094 198 MYRKFTTESDVWSFGVILWEIF 219 (291)
T ss_pred ccCCCCchhhHHHHHHHHHHHH
Confidence 6666777889999987776654
No 302
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.30 E-value=2.2e-11 Score=125.92 Aligned_cols=189 Identities=20% Similarity=0.177 Sum_probs=118.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|.||+|.. +|+.|++|+.+..... .+.. -.
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~----------------------------------~~~~------~~ 45 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND----------------------------------PKTI------KE 45 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccc----------------------------------hHHH------HH
Confidence 6899999999999998 5899999987543221 0001 12
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+.++. ++++.-..-+.......+++|||++|.+|.++..... ..+...+...+ +-..+..+|..|
T Consensus 46 ~~~e~~~~~~l~-----~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 46 IADEMKVLELLK-----HPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHHHHHHHHhCC-----CCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHHHCC
Confidence 233333333331 1222111112223456799999999999999754321 12333332222 222367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCCHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRRT 531 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~---~~~~~D~~~l~~~ 531 (766)
++|+|++|+||++++ ++.++++|||.+..+....... ...+.+ ..+...++.+++...+. .....|++++...
T Consensus 120 i~H~dl~~~nil~~~--~~~~kl~d~g~~~~~~~~~~~~-~~~~~~-~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~i 195 (264)
T cd06626 120 IVHRDIKPANIFLDH--NGVIKLGDFGCAVKLKNNTTTM-GEEVQS-LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCV 195 (264)
T ss_pred cccCCCCHHHEEECC--CCCEEEcccccccccCCCCCcc-cccccC-CcCCcCccChhhccCCCCCCCCcccchHHHHHH
Confidence 999999999999986 8899999999998876543211 000111 23455677777776554 5667899999877
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 196 l~~l~~ 201 (264)
T cd06626 196 VLEMAT 201 (264)
T ss_pred HHHHHh
Confidence 666553
No 303
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.30 E-value=1.3e-11 Score=133.78 Aligned_cols=183 Identities=19% Similarity=0.229 Sum_probs=119.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|.+|.|-+|+. .|+.||||.+|.+--+. + .|++ .
T Consensus 59 etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkd-e------------------------qDlv--------------h 99 (668)
T KOG0611|consen 59 ETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKD-E------------------------QDLV--------------H 99 (668)
T ss_pred HHhcCCcccceeehhhccCCcEeehhhhhhhhccc-H------------------------HHHH--------------H
Confidence 4699999999999998 59999999775432111 0 1111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCH---HHHHHHHHHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAVESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~---~~la~~lv~~~l~qI~~~ 453 (766)
.++|.+.|..+ .+..-|.|-.|+ +-.++.||||||..|+.|.|+..-.+. +.. ..+.+.++ ...+.+|.+
T Consensus 100 IRREIeIMSsL----NHPhII~IyEVF-ENkdKIvivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIv-SAVhYCHkn 172 (668)
T KOG0611|consen 100 IRREIEIMSSL----NHPHIIQIYEVF-ENKDKIVIVMEYASGGELYDYISERGS-LSEREARHFFRQIV-SAVHYCHKN 172 (668)
T ss_pred HHHHHHHHhhc----CCCceeehhhhh-cCCceEEEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHH-HHHHHHhhc
Confidence 23344434333 122223444444 346788999999999999998643221 111 12222222 335667899
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
+++|+|+|-.|||++. ++.+++.|||+...+.+. .+.+.|+ +.+-|+.+++..- -+..|..|-+++...+
T Consensus 173 rVvHRDLKLENILLD~--N~NiKIADFGLSNly~~~---kfLqTFC----GSPLYASPEIvNG~PY~GPEVDsWsLGvLL 243 (668)
T KOG0611|consen 173 RVVHRDLKLENILLDQ--NNNIKIADFGLSNLYADK---KFLQTFC----GSPLYASPEIVNGTPYKGPEVDSWSLGVLL 243 (668)
T ss_pred cceecccchhheeecC--CCCeeeeccchhhhhccc---cHHHHhc----CCcccCCccccCCCCCCCCccchhhHHHHH
Confidence 9999999999999986 889999999999887553 3455544 4666777766643 2344667888888766
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
+-++
T Consensus 244 YtLV 247 (668)
T KOG0611|consen 244 YTLV 247 (668)
T ss_pred HHHh
Confidence 5543
No 304
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.30 E-value=1.6e-11 Score=139.35 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=78.3
Q ss_pred eEEEEeecCCCChhhhhh-h--hhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 410 QILTMEYVPGIKINRIQS-L--DELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 410 ~vLVMEyieG~~L~d~~~-l--~~~g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
.++||||++|. +.+... . ....++...+.... +-..+..+|..|++|+|+||.||+++. .++.++|+|||++.
T Consensus 142 l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~-~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP-NTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC-CCCceeeeccccch
Confidence 46899999974 444321 1 11223333332222 223478899999999999999999985 34579999999998
Q ss_pred ccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHHHHHHH
Q 004234 485 SISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFLNS 538 (766)
Q Consensus 485 ~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~~~l~~ 538 (766)
.+....... ...+++.++++++..- ...+...|++++...+.+++..
T Consensus 220 ~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG 267 (440)
T PTZ00036 220 NLLAGQRSV-------SYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267 (440)
T ss_pred hccCCCCcc-------cCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 775432211 0124566788887643 2356678999999887776643
No 305
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.30 E-value=3e-11 Score=112.91 Aligned_cols=133 Identities=25% Similarity=0.345 Sum_probs=94.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
++++.|+++.||++..++..++||+.++... +.++.
T Consensus 4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--------------------------------------------~~~~~ 39 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREK--------------------------------------------GADRE 39 (155)
T ss_pred eecccccccceEEEEecCCeEEEEecCCCCc--------------------------------------------hhHHH
Confidence 5799999999999999888999998744321 12455
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh---C
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILS---H 453 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~---~ 453 (766)
.|...+..+.+. ...+|+++.... +..+++|||++|..+.... ......+... +...+..+|. .
T Consensus 40 ~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~-----~~~~~~~~~~-~~~~l~~lh~~~~~ 108 (155)
T cd05120 40 REVAILQLLARK-----GLPVPKVLASGESDGWSYLLMEWIEGETLDEVS-----EEEKEDIAEQ-LAELLAKLHQLPLL 108 (155)
T ss_pred HHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEEecCCeecccCC-----HHHHHHHHHH-HHHHHHHHhCCCce
Confidence 666666666553 356777776443 3689999999998876540 0011222222 3344566665 4
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
|++|+|+||+||++++ ++.++++|||.+...++
T Consensus 109 ~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 109 VLCHGDLHPGNILVDD--GKILGIIDWEYAGYGPP 141 (155)
T ss_pred EEEecCCCcceEEEEC--CcEEEEEecccccCCCh
Confidence 8999999999999985 68999999999987654
No 306
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.29 E-value=2.9e-11 Score=124.52 Aligned_cols=184 Identities=15% Similarity=0.130 Sum_probs=117.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|.||+|.. +|+.||+|+........ +-.. .
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~----------------------------------~~~~------~ 45 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE----------------------------------KEKQ------Q 45 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH----------------------------------HHHH------H
Confidence 5799999999999998 58999999873221100 0001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee----ccCCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHHHH--HHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW----EYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYAVE--SYL 447 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~----e~st~~vLVMEyieG~~L~d~~~l~---~~g~d~~~la~~lv~--~~l 447 (766)
+..|...+..+. + ++ +++.+. ......+++|||++|++|.++.... ...++...+...+.+ ..+
T Consensus 46 ~~~e~~~l~~l~----~-~~--i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l 118 (265)
T cd08217 46 LVSEVNILRELK----H-PN--IVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLAL 118 (265)
T ss_pred HHHHHHHHHhcC----C-Cc--cceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 223333333331 1 22 222222 1123458999999999998865321 122344444333322 336
Q ss_pred HHHH-----hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004234 448 EQIL-----SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 522 (766)
Q Consensus 448 ~qI~-----~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~ 522 (766)
..+| ..|++|+|+||+||+++. ++.++++|||++..+...... . .-..+...+++++....+..+..
T Consensus 119 ~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~kl~d~g~~~~~~~~~~~--~----~~~~~~~~~~~pE~~~~~~~~~~ 190 (265)
T cd08217 119 YECHNRSDPGNTVLHRDLKPANIFLDA--NNNVKLGDFGLAKILGHDSSF--A----KTYVGTPYYMSPEQLNHMSYDEK 190 (265)
T ss_pred HHHhcCccccCcceecCCCHHHEEEec--CCCEEEecccccccccCCccc--c----cccccCCCccChhhhcCCCCCch
Confidence 7788 889999999999999986 899999999999987654310 0 01124556777888777667777
Q ss_pred CCHHHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFFLN 537 (766)
Q Consensus 523 ~D~~~l~~~i~~~l~ 537 (766)
.|++++...+.+++.
T Consensus 191 ~Dv~slG~il~~l~~ 205 (265)
T cd08217 191 SDIWSLGCLIYELCA 205 (265)
T ss_pred hHHHHHHHHHHHHHH
Confidence 899999877766553
No 307
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.29 E-value=1.5e-11 Score=129.01 Aligned_cols=184 Identities=14% Similarity=0.123 Sum_probs=112.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+...... ... -.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~------~~ 45 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE----------------------------------GVP------ST 45 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccC----------------------------------Cch------HH
Confidence 5799999999999998 58999999874321110 000 01
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhh-hh-cCCCHHHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DE-LGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~-~g~d~~~la~~lv~--~~l~qI~ 451 (766)
+.+|...+..+. ++++ .+...+ ......++||||++| .+.+.... .. ..++...+...+.+ ..+..+|
T Consensus 46 ~~~e~~~l~~l~-----h~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH 118 (285)
T cd07861 46 AIREISLLKELQ-----HPNIVCLQDVL-MQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH 118 (285)
T ss_pred HHHHHHHHHhcC-----CCCEeeeEEEE-eeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 233444444432 2222 222222 234567999999986 56554321 11 23444444433332 3367889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~ 530 (766)
..|++|+|++|.||+++. +|.++|+|||++..+....+.. ........+++++..... ..+...|++++..
T Consensus 119 ~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 190 (285)
T cd07861 119 SRRVLHRDLKPQNLLIDN--KGVIKLADFGLARAFGIPVRVY------THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGT 190 (285)
T ss_pred hCCeeecCCCHHHEEEcC--CCcEEECcccceeecCCCcccc------cCCcccccccChHHhcCCCCcCcHHHHHHHHH
Confidence 999999999999999986 8999999999998764432210 001124456667765432 2355679999887
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 191 il~~l~t 197 (285)
T cd07861 191 IFAEMAT 197 (285)
T ss_pred HHHHHHH
Confidence 7666543
No 308
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.29 E-value=3.5e-11 Score=125.69 Aligned_cols=184 Identities=17% Similarity=0.153 Sum_probs=117.2
Q ss_pred ccccccceeEEEEEee-c--C--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K--G--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~--G--~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.+|.|++|.||+|++ + + ..|+||..+...... .
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~-----------------------------------------~ 50 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPS-----------------------------------------V 50 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHH-----------------------------------------H
Confidence 6799999999999997 2 2 368889764322110 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL 451 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~ 451 (766)
.-.|.+|+..+.++ .+..-+.+..++ .....+++|||++|++|.++........+...+...+ +...+..+|
T Consensus 51 ~~~~~~e~~~l~~~----~h~~i~~~~~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH 124 (270)
T cd05056 51 REKFLQEAYIMRQF----DHPHIVKLIGVI--TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE 124 (270)
T ss_pred HHHHHHHHHHHHhC----CCCchhceeEEE--cCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11344455544444 222122222222 2355789999999999998764333334444433332 223467889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~ 531 (766)
..|++|+|++|.||+++. ++.++++|||++..+...... .. ........+++++.......+...|++++...
T Consensus 125 ~~~~~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~--~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 197 (270)
T cd05056 125 SKRFVHRDIAARNVLVSS--PDCVKLGDFGLSRYLEDESYY--KA---SKGKLPIKWMAPESINFRRFTSASDVWMFGVC 197 (270)
T ss_pred hCCeeccccChheEEEec--CCCeEEccCceeeecccccce--ec---CCCCccccccChhhhccCCCCchhhhHHHHHH
Confidence 999999999999999986 789999999999877554210 00 01122345777887766666778899999876
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 198 l~el~ 202 (270)
T cd05056 198 MWEIL 202 (270)
T ss_pred HHHHH
Confidence 65543
No 309
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.29 E-value=2.2e-11 Score=127.73 Aligned_cols=184 Identities=13% Similarity=0.110 Sum_probs=112.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +|+.||||+.+...... . .-.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---------------------------~--------------~~~ 44 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG---------------------------T--------------PST 44 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEeccccccc---------------------------c--------------hHH
Confidence 6799999999999999 59999999875332110 0 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh--cCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE--LGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~--~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
+.+|+..+..+. ++++.-..-+.......+|||||++| .+.++..... ..++...+...+.+ ..+..+|.
T Consensus 45 ~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (284)
T cd07836 45 AIREISLMKELK-----HENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE 118 (284)
T ss_pred HHHHHHHHHhhc-----CCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 233555444442 23332222222334567999999997 5665432211 22444444333332 33678899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~ 531 (766)
.|++|+|++|.||++++ ++.++++|||++..+......... ...+..++.++....+ ..+...|++++...
T Consensus 119 ~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~~~------~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~ 190 (284)
T cd07836 119 NRVLHRDLKPQNLLINK--RGELKLADFGLARAFGIPVNTFSN------EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCI 190 (284)
T ss_pred CCeeeCCCCHHHEEECC--CCcEEEeecchhhhhcCCcccccc------ccccccccChHHhcCCCCCCcHHHHHHHHHH
Confidence 99999999999999985 889999999999766433211000 0123445666655332 33556788888876
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 191 l~~l~~ 196 (284)
T cd07836 191 MAEMIT 196 (284)
T ss_pred HHHHHh
Confidence 665543
No 310
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.29 E-value=2.6e-11 Score=124.49 Aligned_cols=158 Identities=18% Similarity=0.216 Sum_probs=104.5
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+.+++++||+||.+...|++++.+... .. | -| ..... .. -+.
T Consensus 8 ~~l~~~~f~~v~~~~~~~~k~~~~~l~----~~-------------------~-------~~---~~~~~----~~-l~~ 49 (218)
T PRK12274 8 EPLKSDTFGRILLVRGGERKFVRRDLS----AA-------------------P-------WW---LRGVA----WW-LAR 49 (218)
T ss_pred eeecCCCcceEEEeecCCceeeecccc----cc-------------------h-------hh---hhhHH----HH-HHH
Confidence 679999999999777778877766331 00 0 00 00000 11 356
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcccc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 458 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHa 458 (766)
+|++.+.++.+ ...+|.++.- ...+++|||++|.+|.+.... ....+... +...++++|..|++|+
T Consensus 50 rE~~iL~~L~~------~~~vP~ll~~--~~~~lvmeyI~G~~L~~~~~~-----~~~~~~~q-i~~~L~~lH~~GIvHr 115 (218)
T PRK12274 50 REALALRQLDG------LPRTPRLLHW--DGRHLDRSYLAGAAMYQRPPR-----GDLAYFRA-ARRLLQQLHRCGVAHN 115 (218)
T ss_pred HHHHHHHhcCC------CCCCCEEEEE--cCEEEEEeeecCccHHhhhhh-----hhHHHHHH-HHHHHHHHHHCcCccC
Confidence 67777776532 2457888752 567999999999998754211 11222222 2346888999999999
Q ss_pred CC-CCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 459 DP-HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 459 Dp-HPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
|+ ||+||+++. +|.++|+|||++....+..+ . ..-+..+|...+...+..
T Consensus 116 DL~kp~NILv~~--~g~i~LIDFG~A~~~~~~~~--~---~r~L~~rDl~~llk~~~~ 166 (218)
T PRK12274 116 DLAKEANWLVQE--DGSPAVIDFQLAVRGNPRAR--W---MRLLAREDLRHLLKHKRM 166 (218)
T ss_pred CCCCcceEEEcC--CCCEEEEECCCceecCCcch--H---HHHHHHHHHHHHHHHHHh
Confidence 99 799999985 78999999999997765433 1 111234788888887755
No 311
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.29 E-value=2.3e-11 Score=132.77 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=94.1
Q ss_pred ccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.-+|.|.+|.||.|+++ +...|+||+-.. .|.. + +.+ ..
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~----------~l~~------r----------------kKl-------~R 123 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKE----------SLAS------R----------------KKL-------KR 123 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHH----------HHhh------h----------------hHH-------HH
Confidence 56999999999999995 589999998211 1000 0 000 00
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCe--EEEEeecCCCChhhhhhhhhcC-C--CHHHHHHHHHHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQ--ILTMEYVPGIKINRIQSLDELG-V--DRKRLGRYAVESYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~--vLVMEyieG~~L~d~~~l~~~g-~--d~~~la~~lv~~~l~qI~ 451 (766)
-..|...+. ..++-.+|..|..+.+.. +|+||||+|+.|..+.+-.... + +..+.-..-+-..|+++|
T Consensus 124 a~tE~eIL~-------~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH 196 (459)
T KOG0610|consen 124 AQTEREILS-------LLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH 196 (459)
T ss_pred HHHHHHHHH-------hcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH
Confidence 111222222 223346788888877765 8999999999999865432221 1 122222223345588999
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
-.||+.||+||+||||.+ +|+|.|.||-++.+.
T Consensus 197 mlGivYRDLKPENILvre--dGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 197 MLGIVYRDLKPENILVRE--DGHIMLSDFDLSLRC 229 (459)
T ss_pred hhceeeccCCcceeEEec--CCcEEeeeccccccC
Confidence 999999999999999997 999999999987654
No 312
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.29 E-value=2.9e-11 Score=127.84 Aligned_cols=186 Identities=15% Similarity=0.137 Sum_probs=116.8
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.||.|++|.||+|... ...||+|+.+.+....
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~---------------------------------------- 57 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEK---------------------------------------- 57 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHH----------------------------------------
Confidence 68999999999999972 2679999875432111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCCH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVDR 435 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d~ 435 (766)
...++.+|..-+.++. +++++ .+..++ ......+++|||++|++|.++..... ..++.
T Consensus 58 -~~~~~~~E~~~l~~l~----~h~~i~~~~~~~-~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 131 (293)
T cd05053 58 -DLSDLVSEMEMMKMIG----KHKNIINLLGVC-TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQ 131 (293)
T ss_pred -HHHHHHHHHHHHHhhc----CCCCeeeEEEEE-cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCH
Confidence 0112344444343331 22332 232322 33456799999999999988653211 11233
Q ss_pred HHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004234 436 KRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 513 (766)
Q Consensus 436 ~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l 513 (766)
..+...+.+ ..+..+|..|++|+|++|.||++++ ++.++|+|||.+..+......... ........+++++.
T Consensus 132 ~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~ 205 (293)
T cd05053 132 KDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTE--DHVMKIADFGLARDIHHIDYYRKT----TNGRLPVKWMAPEA 205 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcC--CCeEEeCccccccccccccceecc----CCCCCCccccCHHH
Confidence 333333322 3467889999999999999999986 899999999999876543211000 00111234667777
Q ss_pred HHcCCCCCCCCHHHHHHHHHHHH
Q 004234 514 VQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 514 ~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
...+..+...|++++...+.+++
T Consensus 206 ~~~~~~~~~~Di~slG~il~el~ 228 (293)
T cd05053 206 LFDRVYTHQSDVWSFGVLLWEIF 228 (293)
T ss_pred hccCCcCcccceeehhhHHHHHh
Confidence 66666777889999987765543
No 313
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.28 E-value=2.3e-11 Score=129.96 Aligned_cols=189 Identities=14% Similarity=0.119 Sum_probs=112.0
Q ss_pred CcccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+...||.|++|.||+|+. ++..||+|..++.-.
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~------------------------------------------- 41 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI------------------------------------------- 41 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-------------------------------------------
Confidence 345799999999999997 257899997642110
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhh--------hcCCCHHHHHHHH-
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLD--------ELGVDRKRLGRYA- 442 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~--------~~g~d~~~la~~l- 442 (766)
...+.+|++.+.++ .+..-+.+..++... ....+++|||+++ .+.++.... ...++...+...+
T Consensus 42 -~~~~~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 115 (317)
T cd07867 42 -SMSACREIALLREL----KHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLY 115 (317)
T ss_pred -cHHHHHHHHHHHhC----CCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHH
Confidence 00122344433333 222223333333222 2346899999987 444432211 0112332222222
Q ss_pred -HHHHHHHHHhCCccccCCCCCcEEEee--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CC
Q 004234 443 -VESYLEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GV 518 (766)
Q Consensus 443 -v~~~l~qI~~~GffHaDpHPGNILV~~--~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~ 518 (766)
+-..+..+|..|++|+|+||.||++.. ..++.++|+|||++..+....... .. .....++..++++++..- ..
T Consensus 116 qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~-~~--~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 116 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL-AD--LDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-cc--cCcceecccccCcHHhcCCCc
Confidence 223477889999999999999999952 135789999999998775432210 00 011123556778887653 33
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l~ 537 (766)
.+...|++++...+.+++.
T Consensus 193 ~~~~~DiwSlG~il~el~t 211 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred cCcHHHHHhHHHHHHHHHh
Confidence 5667899999987776653
No 314
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.28 E-value=3.7e-11 Score=123.24 Aligned_cols=182 Identities=18% Similarity=0.166 Sum_probs=115.8
Q ss_pred ccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+|.|++|+||++.. +|+.|++|+.+.+....- .....+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~---------------------------------------~~~~~~~ 41 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR---------------------------------------KEVEHTL 41 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch---------------------------------------HHHHHHH
Confidence 68999999999998 489999998754321110 0011222
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
.|...+..+. +++ ++.++. +.....+++|||++|.+|.+..... ..++...+...+. -..+..+|..|
T Consensus 42 ~e~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 42 TERNILSRIN-----HPF--IVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred HHHHHHHHcC-----CCc--HHHHHHHeecCCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3333333221 111 222221 2244569999999999998865322 1344444443332 23467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||++......... .....+...++.++...-...++..|.+++...+.+
T Consensus 114 ~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~ 185 (250)
T cd05123 114 IIYRDLKPENILLDA--DGHIKLTDFGLAKELSSEGSR------TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYE 185 (250)
T ss_pred ceecCCCcceEEEcC--CCcEEEeecCcceecccCCCc------ccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHH
Confidence 999999999999986 889999999999877553210 111234556667777665556677899999877665
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 186 l~~ 188 (250)
T cd05123 186 MLT 188 (250)
T ss_pred HHH
Confidence 553
No 315
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.28 E-value=1.7e-11 Score=143.92 Aligned_cols=191 Identities=14% Similarity=0.110 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee-c-CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K-GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~-G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|+||+||.|++ . |.+||+|.+.-. . ++--+.+.+|++
T Consensus 43 ~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-d-----------------------------------e~~L~~v~~EI~ 86 (738)
T KOG1989|consen 43 KVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-D-----------------------------------EEALNAVKREID 86 (738)
T ss_pred EEEccCCcEEEEEEEecCCCceeeeeeeecC-C-----------------------------------HHHHHHHHHHHH
Confidence 5799999999999999 4 499999977322 1 111123455666
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC----CCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYT----TPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQ 449 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s----t~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--l~q 449 (766)
++...++....-..+... .....+ -+..|.||||.|+.|-|+..- ...++...++...+.+.+ +..
T Consensus 87 ~MK~L~gh~nIV~yidss-------~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~ 159 (738)
T KOG1989|consen 87 IMKLLSGHKNIVSYIDSS-------AINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAA 159 (738)
T ss_pred HHHHhcCCCceeeEeccc-------cccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 555443211111111100 000001 134799999999999887542 233467777777765544 667
Q ss_pred HHhCC--ccccCCCCCcEEEeecCCCcEEEEeecceeccChhh--HHHHHHHHHHHh-hcCH----HHHHHHHHHcCCCC
Q 004234 450 ILSHG--FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI--REGLLEAFYGIY-EKDA----DKVLQAMVQMGVLV 520 (766)
Q Consensus 450 I~~~G--ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~--r~~l~~l~~a~~-~~D~----~~v~~~l~~lG~~~ 520 (766)
+|... ++|||||-+|||+.. +|..+|||||.+....... .....-+=.-+. .-++ ..|++.+..+++ .
T Consensus 160 mH~~~pPiIHRDLKiENvLls~--~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI-~ 236 (738)
T KOG1989|consen 160 MHYLKPPIIHRDLKIENVLLSA--DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPI-G 236 (738)
T ss_pred HhcCCCccchhhhhhhheEEcC--CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCC-c
Confidence 78766 999999999999986 8999999999987542221 111111111111 1122 334455544554 6
Q ss_pred CCCCHHHHHHHHHHH
Q 004234 521 PTGDTTAVRRTAQFF 535 (766)
Q Consensus 521 ~~~D~~~l~~~i~~~ 535 (766)
++.|+++|...++.+
T Consensus 237 eKsDIWALGclLYkL 251 (738)
T KOG1989|consen 237 EKSDIWALGCLLYKL 251 (738)
T ss_pred chhHHHHHHHHHHHH
Confidence 788999999877655
No 316
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.28 E-value=2.6e-11 Score=129.19 Aligned_cols=182 Identities=19% Similarity=0.157 Sum_probs=117.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|.||+|.. +|+.|++|+....-.. ..-.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~------------------------------------------~~~~ 62 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP------------------------------------------KKEL 62 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccch------------------------------------------HHHH
Confidence 6899999999999987 6899999976211000 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|...+..+ . ++++.-..-+.......++||||++|++|.++... ...+...+...+.+ ..+..+|..|
T Consensus 63 ~~~e~~~l~~l----~-hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~g 135 (293)
T cd06647 63 IINEILVMREN----K-HPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQ 135 (293)
T ss_pred HHHHHHHHhhc----C-CCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 23333322222 2 23322222122234568999999999999986532 22333333332222 2367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|++|.||+++. ++.++++|||++..+.+..... ....+...++.+++...+..+...|++++...+.+
T Consensus 136 i~H~dL~p~Nili~~--~~~~kL~dfg~~~~~~~~~~~~------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ 207 (293)
T cd06647 136 VIHRDIKSDNILLGM--DGSVKLTDFGFCAQITPEQSKR------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (293)
T ss_pred EeeccCCHHHEEEcC--CCCEEEccCcceeccccccccc------ccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence 999999999999986 7899999999988776543211 11124456777887777777778999999877766
Q ss_pred HHH
Q 004234 535 FLN 537 (766)
Q Consensus 535 ~l~ 537 (766)
++.
T Consensus 208 ll~ 210 (293)
T cd06647 208 MVE 210 (293)
T ss_pred HHh
Confidence 553
No 317
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.28 E-value=5.3e-12 Score=140.68 Aligned_cols=185 Identities=14% Similarity=0.150 Sum_probs=134.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|+||-++..+. ++..+|+|..+=. ...+..++...+|++
T Consensus 10 ~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~----------------------------------~~t~~~r~~A~~E~~ 55 (426)
T KOG0589|consen 10 RQVGRGAFGSALLVRHKSDDKLYVLKKINLE----------------------------------KLTEPERRSAIQEMD 55 (426)
T ss_pred hhcCccccchhhhhhhccCCceEEEEEEecc----------------------------------ccCchhhHHHHHHHH
Confidence 5799999999988887 5889999976210 011112223334433
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCC-eEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHH--HHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTP-QILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESY--LEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~-~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~~~--l~qI~~ 452 (766)
+. . ...+..-|..+..+.+ .+. .++||+|++|+++.+...-.+ .-++.+++....++.. +..+|+
T Consensus 56 li------s----~~~hP~iv~y~ds~~~-~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~ 124 (426)
T KOG0589|consen 56 LL------S----KLLHPNIVEYKDSFEE-DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE 124 (426)
T ss_pred HH------H----hccCCCeeeeccchhc-CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh
Confidence 32 2 2334334555555443 444 899999999999999654333 4467788888887765 778999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
..++|||+|+.|||++. ++.|+|.|||+++.+.++. .++ ..+-+++.++.+++++---.....|++++.-.+
T Consensus 125 ~~iLHRDlK~~Nifltk--~~~VkLgDfGlaK~l~~~~--~~a----~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~ 196 (426)
T KOG0589|consen 125 NRVLHRDLKCANIFLTK--DKKVKLGDFGLAKILNPED--SLA----STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL 196 (426)
T ss_pred hhhhcccchhhhhhccc--cCceeecchhhhhhcCCch--hhh----heecCCCcccCHHHhCCCCCCccCcchhhcchH
Confidence 99999999999999996 8889999999999998875 222 334579999999999866666788999999877
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
+++.
T Consensus 197 yEm~ 200 (426)
T KOG0589|consen 197 YEMC 200 (426)
T ss_pred HHHH
Confidence 7654
No 318
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.28 E-value=7.5e-11 Score=122.32 Aligned_cols=182 Identities=15% Similarity=0.173 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|+|++|.||+|.. +++.|++|+..+.... +-+
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------------------------------------------~~~ 48 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE-------------------------------------------EEE 48 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCchh-------------------------------------------HHH
Confidence 6899999999999999 5889999987433110 112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc--------CCCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHHH--
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY--------TTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYAV-- 443 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~--------st~~vLVMEyieG~~L~d~~~l~~---~g~d~~~la~~lv-- 443 (766)
+.+|...+.++. ++++ +++++..+ ....+++|||++|++|.++..... ..++...+...+.
T Consensus 49 ~~~e~~~l~~~~----~h~~--i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql 122 (275)
T cd06608 49 IKEEYNILRKYS----NHPN--IATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRET 122 (275)
T ss_pred HHHHHHHHHHhc----CCCC--hheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence 334444444432 1222 22322211 233689999999999988654221 2334443333322
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-----C
Q 004234 444 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-----V 518 (766)
Q Consensus 444 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-----~ 518 (766)
...+..+|..|++|+|++|.||+++. ++.++|+|||++..+....... ....+...++++++.... .
T Consensus 123 ~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~ 194 (275)
T cd06608 123 LRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLVDFGVSAQLDSTLGRR------NTFIGTPYWMAPEVIACDEQPDAS 194 (275)
T ss_pred HHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEECCCccceecccchhhh------cCccccccccCHhHhcccccccCC
Confidence 23367889999999999999999986 7899999999998765432211 112245567777776432 2
Q ss_pred CCCCCCHHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l~ 537 (766)
.....|++++...+.+++.
T Consensus 195 ~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 195 YDARSDVWSLGITAIELAD 213 (275)
T ss_pred ccccccHHHhHHHHHHHHh
Confidence 3456799999877766553
No 319
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.28 E-value=2.7e-11 Score=128.24 Aligned_cols=183 Identities=16% Similarity=0.123 Sum_probs=115.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.|+||..+...... .+ ..+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~------~~~ 50 (293)
T cd07843 11 NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE----------------------------------GF------PIT 50 (293)
T ss_pred hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc----------------------------------cc------hhh
Confidence 6799999999999999 58999999874321110 00 112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccC--CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~ 451 (766)
+.+|...+.++. ++++ .+...+ .-. ...+++|||+++ .|.++.......++...+...+.+ ..+..+|
T Consensus 51 ~~~e~~~l~~l~-----h~ni~~~~~~~-~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 123 (293)
T cd07843 51 SLREINILLKLQ-----HPNIVTVKEVV-VGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH 123 (293)
T ss_pred HHHHHHHHHhcC-----CCCEEEEEEEE-EecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 334444444442 2332 222221 222 678999999987 776654332223455554444433 3478889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~ 530 (766)
..|++|+|++|+||+++. ++.++++|||++..+....... ....++..+++++....+ ..+...|++++..
T Consensus 124 ~~~i~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~~~~------~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~ 195 (293)
T cd07843 124 DNWILHRDLKTSNLLLNN--RGILKICDFGLAREYGSPLKPY------TQLVVTLWYRAPELLLGAKEYSTAIDMWSVGC 195 (293)
T ss_pred HCCeeeccCCHHHEEECC--CCcEEEeecCceeeccCCcccc------ccccccccccCchhhcCCccccchhhHHHHHH
Confidence 999999999999999986 7899999999998776542111 011234456667765432 3456689999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 196 ~l~~l~ 201 (293)
T cd07843 196 IFAELL 201 (293)
T ss_pred HHHHHH
Confidence 766554
No 320
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=8e-11 Score=117.69 Aligned_cols=139 Identities=25% Similarity=0.305 Sum_probs=104.6
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
.+++.|.-+.++.+.+.|.++++|..-|.....-+.|-+ +.+| .-.
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~k---------------------------------lrr~-Rt~ 47 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEK---------------------------------LRRE-RTR 47 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHH---------------------------------HHHH-HHH
Confidence 467889999999998888889999886655444333322 2222 457
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcccc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 458 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHa 458 (766)
+||+.+.+.+. ..|.+|.+|.-......|+|||++|..+.|...-. +..+.+. +-..+.-+|..||+|+
T Consensus 48 ~Earil~~a~~-----~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-----~~~~~r~-vG~~vg~lH~~givHG 116 (204)
T COG3642 48 REARILAKARE-----AGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-----RPDLLRE-VGRLVGKLHKAGIVHG 116 (204)
T ss_pred HHHHHHHHHHH-----cCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-----chHHHHH-HHHHHHHHHhcCeecC
Confidence 89999988876 36899999988888889999999999998764321 1122222 2334567899999999
Q ss_pred CCCCCcEEEeecCCCcEEEEeecceec
Q 004234 459 DPHPGNIAVDDVNGGRLIFYDFGMMGS 485 (766)
Q Consensus 459 DpHPGNILV~~~~~g~l~LiDFGlv~~ 485 (766)
||.+.||++. ++++++||||+...
T Consensus 117 DLTtsNiIl~---~~~i~~IDfGLg~~ 140 (204)
T COG3642 117 DLTTSNIILS---GGRIYFIDFGLGEF 140 (204)
T ss_pred CCccceEEEe---CCcEEEEECCcccc
Confidence 9999999997 56799999999874
No 321
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.27 E-value=3.3e-11 Score=127.58 Aligned_cols=185 Identities=15% Similarity=0.115 Sum_probs=117.5
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+.+|.|++|.||++.. ++..||+|..+-.. ..
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~------------------------------------~~----- 49 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS------------------------------------DN----- 49 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC------------------------------------HH-----
Confidence 5799999999999985 24568888652110 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh------------cCCCHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE------------LGVDRKRLG 439 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~------------~g~d~~~la 439 (766)
..-++.+|+..+.++ . ++++....-+.......+++|||++|++|.++..... ..++...+.
T Consensus 50 -~~~~~~~e~~~l~~l----~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (288)
T cd05093 50 -ARKDFHREAELLTNL----Q-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQML 123 (288)
T ss_pred -HHHHHHHHHHHHHhC----C-CCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHH
Confidence 011344555544443 2 2333222222334567899999999999988653211 113444443
Q ss_pred HHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC
Q 004234 440 RYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG 517 (766)
Q Consensus 440 ~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG 517 (766)
..+.+ ..+..+|..|++|+|++|.||++++ ++.++++|||++..+........ .........+++++....+
T Consensus 124 ~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~ 197 (288)
T cd05093 124 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--NLLVKIGDFGMSRDVYSTDYYRV----GGHTMLPIRWMPPESIMYR 197 (288)
T ss_pred HHHHHHHHHHHHHHhCCeeecccCcceEEEcc--CCcEEeccCCccccccCCceeec----CCCCCccccccCHHHhccC
Confidence 33332 3367889999999999999999986 88999999999887643221100 0011124567888888777
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q 004234 518 VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 518 ~~~~~~D~~~l~~~i~~~l 536 (766)
..++..|++++...+.+++
T Consensus 198 ~~~~~sDiwslG~il~~l~ 216 (288)
T cd05093 198 KFTTESDVWSLGVVLWEIF 216 (288)
T ss_pred CCCchhhHHHHHHHHHHHH
Confidence 7777899999987776654
No 322
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.27 E-value=5e-11 Score=124.24 Aligned_cols=191 Identities=16% Similarity=0.082 Sum_probs=117.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.|++|+...+..... . . ...-+
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--------------------------~-----~------~~~~~ 50 (264)
T cd06653 8 KLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQE--------------------------T-----S------KEVNA 50 (264)
T ss_pred eeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccch--------------------------h-----h------HHHHH
Confidence 6799999999999998 599999997632211100 0 0 01113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
+.+|+..+.++. +..-+.+...+... ....+++|||++|++|.+..... ...+...+.... +...+..+|..
T Consensus 51 ~~~ei~~l~~l~----h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~ 125 (264)
T cd06653 51 LECEIQLLKNLR----HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSN 125 (264)
T ss_pred HHHHHHHHHHcC----CCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445555454442 21112222222221 23468999999999998864321 123333332221 22346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|+||+++. ++.+++.|||.+..+......... .....+...++++++......+...|++++...+.
T Consensus 126 ~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 200 (264)
T cd06653 126 MIVHRDIKGANILRDS--AGNVKLGDFGASKRIQTICMSGTG---IKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVV 200 (264)
T ss_pred CEecCCCCHHHEEEcC--CCCEEECccccccccccccccCcc---ccccCCcccccCHhhhcCCCCCccccHHHHHHHHH
Confidence 9999999999999985 889999999999876432111000 00112455677787776655677789999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 201 ~l~ 203 (264)
T cd06653 201 EML 203 (264)
T ss_pred HHH
Confidence 654
No 323
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.27 E-value=2.3e-11 Score=132.72 Aligned_cols=194 Identities=19% Similarity=0.224 Sum_probs=117.3
Q ss_pred HhCCChhhhhhccC-cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004234 284 ELGAPLDDVFERFD-VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (766)
Q Consensus 284 elG~~~eeiF~~fd-~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~ 360 (766)
+.++.+.++...|. .++||+|++|.||+|+. +|+.||||+.+......
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------- 55 (342)
T cd07879 5 EVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE----------------------------- 55 (342)
T ss_pred hhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-----------------------------
Confidence 45555555556664 48999999999999997 59999999874321100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhhhhhhcCCCH
Q 004234 361 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQSLDELGVDR 435 (766)
Q Consensus 361 ~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~~l~~~g~d~ 435 (766)
.+.. ++..|...+..+. +..-+.+..++.. .....++||||+++ .+.+.. ...+..
T Consensus 56 -----~~~~------~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~---~~~~~~ 116 (342)
T cd07879 56 -----IFAK------RAYRELTLLKHMQ----HENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM---GHPLSE 116 (342)
T ss_pred -----cchh------HHHHHHHHHHhcC----CCCccchhheecccccCCCCceEEEEeccccc-CHHHHH---cCCCCH
Confidence 0001 1222333222221 1111222222211 12345899999975 444432 223444
Q ss_pred HHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004234 436 KRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 513 (766)
Q Consensus 436 ~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l 513 (766)
..+...+.+ ..+..+|..|++|+|++|+||+++. ++.++|+|||++...+..... ..++..+++++.
T Consensus 117 ~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~kL~dfg~~~~~~~~~~~---------~~~~~~y~aPE~ 185 (342)
T cd07879 117 DKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCELKILDFGLARHADAEMTG---------YVVTRWYRAPEV 185 (342)
T ss_pred HHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCCCCcCCCCCCCC---------ceeeecccChhh
Confidence 443333322 3467889999999999999999986 899999999998876443211 122445667776
Q ss_pred HHcC-CCCCCCCHHHHHHHHHHHH
Q 004234 514 VQMG-VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 514 ~~lG-~~~~~~D~~~l~~~i~~~l 536 (766)
...+ ..+...|++++...+.+++
T Consensus 186 ~~~~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 186 ILNWMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred hcCccccCchHHHHHHHHHHHHHH
Confidence 6442 3556789999987776655
No 324
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.27 E-value=9.2e-11 Score=121.15 Aligned_cols=184 Identities=14% Similarity=0.149 Sum_probs=119.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCC-ccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPG-LKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~-i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+.+|+|++|.||.++. +|+.||+|..... ... . ..-
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~-------~~~ 44 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP----------------------------------K-------ERE 44 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh----------------------------------H-------HHH
Confidence 5799999999999998 5899999976210 000 0 001
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHh
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
++.+|...+.++ . ++++.-..-+.+.....+++|||++|++|.+...... ...+...+...+.+ ..+..+|.
T Consensus 45 ~~~~e~~~l~~l----~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~ 119 (256)
T cd08218 45 ESRKEVAVLSNM----K-HPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119 (256)
T ss_pred HHHHHHHHHHhC----C-CCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 233444434333 2 2332211112233456799999999999988653321 23344444333322 23677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||+++. ++.++++|||++..+....... ....+...+++++...-+..+...|++++...+
T Consensus 120 ~~i~h~~l~~~nil~~~--~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~ 191 (256)
T cd08218 120 RKILHRDIKSQNIFLTK--DGTIKLGDFGIARVLNSTVELA------RTCIGTPYYLSPEICENRPYNNKSDIWALGCVL 191 (256)
T ss_pred CCEecCCCCHHHEEEcC--CCCEEEeeccceeecCcchhhh------hhccCCccccCHHHhCCCCCCCccchhHHHHHH
Confidence 99999999999999985 7899999999998776543211 112245567788887767777788999998776
Q ss_pred HHHH
Q 004234 533 QFFL 536 (766)
Q Consensus 533 ~~~l 536 (766)
.+++
T Consensus 192 ~~l~ 195 (256)
T cd08218 192 YEMC 195 (256)
T ss_pred HHHH
Confidence 6554
No 325
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.27 E-value=1.8e-11 Score=127.34 Aligned_cols=118 Identities=14% Similarity=0.063 Sum_probs=81.6
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCC--------cEE
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGG--------RLI 476 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g--------~l~ 476 (766)
....+++|||++|++|.++........+.......+ +-..+..+|..|++|+|++|.||+++. ++ .++
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~~~~~~~~~~ 148 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIR--EEDRKTGNPPFIK 148 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEec--ccccccCCCceEE
Confidence 356799999999999988754333334444433322 223467889999999999999999985 33 379
Q ss_pred EEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHHHHH
Q 004234 477 FYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 477 LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~~~l 536 (766)
++|||......+.. ...++..+++++...- +..+...|++++...+.+++
T Consensus 149 l~d~g~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~ 199 (258)
T cd05078 149 LSDPGISITVLPKE----------ILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIF 199 (258)
T ss_pred ecccccccccCCch----------hccccCCccCchhccCCCCCCchhhHHHHHHHHHHHH
Confidence 99999887654421 1234556777776654 34566789999987766654
No 326
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.27 E-value=2.1e-11 Score=127.50 Aligned_cols=187 Identities=18% Similarity=0.184 Sum_probs=115.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|+||+|+. +|+.||||+.+...... +. ..+
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~----------------------------------~~------~~~ 44 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE----------------------------------GF------PIT 44 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccc----------------------------------cc------hHH
Confidence 4689999999999998 48999999985432100 00 113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+..|...+.++. +..-+.+..++..- ....+++|||+++ ++.++.......++...+...+.+ ..+..+|..
T Consensus 45 ~~~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~ 119 (287)
T cd07840 45 AIREIKLLQKLR----HPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN 119 (287)
T ss_pred HHHHHHHHHhcc----CCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 444555444442 22222333333322 2578999999986 676654322223444443333322 236788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~~~D~~~l~~~i 532 (766)
|++|+|++|.||++++ ++.++++|||++..+.......... ...+..+++++... ....++..|++++...+
T Consensus 120 ~~~h~dl~p~nil~~~--~~~~~l~d~g~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l 192 (287)
T cd07840 120 GILHRDIKGSNILINN--DGVLKLADFGLARPYTKRNSADYTN-----RVITLWYRPPELLLGATRYGPEVDMWSVGCIL 192 (287)
T ss_pred CceeccCcHHHeEEcC--CCCEEEccccceeeccCCCcccccc-----cccccccCCceeeEccccCChHHHHHHHHHHH
Confidence 9999999999999986 8999999999998876543211110 01233445555332 22345667999888776
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 193 ~el~t 197 (287)
T cd07840 193 AELFL 197 (287)
T ss_pred HHHHh
Confidence 66543
No 327
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.27 E-value=5.5e-11 Score=124.07 Aligned_cols=191 Identities=14% Similarity=0.086 Sum_probs=119.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|.||+|.. +|+.|++|+.+......- .. ..-..
T Consensus 8 ~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~-------------------------------~~------~~~~~ 50 (266)
T cd06651 8 KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPE-------------------------------TS------KEVSA 50 (266)
T ss_pred ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCch-------------------------------hH------HHHHH
Confidence 6899999999999998 589999997743221110 00 01113
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
+.+|...+..+. ++++ .+...+.+. ....+++|||++|++|.+..... ...+.......+ +...+..+|.
T Consensus 51 ~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~ 124 (266)
T cd06651 51 LECEIQLLKNLQ-----HERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHS 124 (266)
T ss_pred HHHHHHHHHHcC-----CCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 455555555442 2332 222222221 23468999999999998865321 123433333322 2234677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.|++|+|++|.||+++. ++.++|+|||++..+......... .....+...+++++.......+...|++++...+
T Consensus 125 ~~i~H~~l~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 199 (266)
T cd06651 125 NMIVHRDIKGANILRDS--AGNVKLGDFGASKRLQTICMSGTG---IRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV 199 (266)
T ss_pred CCeeeCCCCHHHEEECC--CCCEEEccCCCccccccccccCCc---cccCCccccccCHHHhCCCCCCchhhhHHHHHHH
Confidence 99999999999999985 789999999998876432111000 0112345567788887766666778999998776
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 200 ~el~~ 204 (266)
T cd06651 200 VEMLT 204 (266)
T ss_pred HHHHH
Confidence 66553
No 328
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.27 E-value=2.4e-11 Score=127.58 Aligned_cols=185 Identities=19% Similarity=0.213 Sum_probs=117.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.|+||+.+...... +... .
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~----------------------------------~~~~------~ 46 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE----------------------------------DVKK------T 46 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc----------------------------------cchh------H
Confidence 5799999999999998 58999999874321100 0111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|.+.+.++. +..-+.+..++.. ....+++|||++|..+..+.. ...+.+...+...+.+ ..+..+|..|
T Consensus 47 ~~~e~~~l~~l~----~~~i~~~~~~~~~-~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 47 ALREVKVLRQLR----HENIVNLKEAFRR-KGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred HHHHHHHHHhcC----CCCeeehhheEEE-CCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 333444444432 2222223333322 456799999999977765432 2233454444443332 3477889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|+||++++ ++.++|+|||++..+......... ...+...++++++.... ..+...|++++...+.
T Consensus 121 i~H~dl~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~~~~-----~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~ 193 (288)
T cd07833 121 IIHRDIKPENILVSE--SGVLKLCDFGFARALRARPASPLT-----DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMA 193 (288)
T ss_pred eecCCCCHHHeEECC--CCCEEEEeeecccccCCCcccccc-----CcccccCCcCCchhcCCCCcCchhhHHHHHHHHH
Confidence 999999999999986 899999999999887654431111 11233446667766555 5566789999887666
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 194 ~l~ 196 (288)
T cd07833 194 ELL 196 (288)
T ss_pred HHH
Confidence 554
No 329
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.27 E-value=3.9e-11 Score=126.76 Aligned_cols=186 Identities=17% Similarity=0.178 Sum_probs=111.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+...... + . .-+
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~---------------------------~-------~------~~~ 46 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE---------------------------G-------I------PPT 46 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhcccc---------------------------C-------C------chH
Confidence 5689999999999998 58999999863321110 0 0 012
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeeccCC----CeEEEEeecCCCChhhhhhhhh----cCCCHHHHHHHHHH--H
Q 004234 377 YTQEAANAELFASNFKDMDY-VKVPTIFWEYTT----PQILTMEYVPGIKINRIQSLDE----LGVDRKRLGRYAVE--S 445 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~st----~~vLVMEyieG~~L~d~~~l~~----~g~d~~~la~~lv~--~ 445 (766)
+.+|...+..+. ++++ +.+..++..... ..+++|||++| .+.+...... ..++...+...+.+ .
T Consensus 47 ~~~E~~~l~~l~----~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~ 121 (295)
T cd07837 47 ALREISLLQMLS----ESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK 121 (295)
T ss_pred HHHHHHHHHHcc----CCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHH
Confidence 333444343332 2222 222222221111 25899999998 5666432211 12344444333333 3
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCC
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGD 524 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D 524 (766)
.+..+|..|++|+|++|+||+++. .++.++++|||++..+......... ..+.+.+++++.... ...+...|
T Consensus 122 ~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~dfg~~~~~~~~~~~~~~------~~~~~~~~aPE~~~~~~~~~~~~D 194 (295)
T cd07837 122 GVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIADLGLGRAFSIPVKSYTH------EIVTLWYRAPEVLLGSTHYSTPVD 194 (295)
T ss_pred HHHHHHHCCeeecCCChHHEEEec-CCCeEEEeecccceecCCCccccCC------cccccCCCChHHhhCCCCCCchHH
Confidence 477889999999999999999984 3688999999998876443211100 012344566665532 33466789
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
++++...+.+++
T Consensus 195 i~slG~~l~~l~ 206 (295)
T cd07837 195 IWSVGCIFAEMS 206 (295)
T ss_pred HHHHHHHHHHHH
Confidence 999987776654
No 330
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.27 E-value=2.4e-11 Score=129.62 Aligned_cols=138 Identities=16% Similarity=0.129 Sum_probs=84.4
Q ss_pred CccccceeeeccCC------CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEE
Q 004234 395 DYVKVPTIFWEYTT------PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIA 466 (766)
Q Consensus 395 ~~V~vP~v~~e~st------~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNIL 466 (766)
.+..+|..+..... ..+++||++.+ .+.+..... .......+...+ +...+..+|..|++|||+||.||+
T Consensus 81 ~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 81 DHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred CCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 34556666642111 23678887654 333332111 112233322222 223467889999999999999999
Q ss_pred EeecCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 467 VDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 467 V~~~~~g~l~LiDFGlv~~L~~~~r~~-l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+++ ++.++|+|||++..+....... +..-......+.+.+++++.......+...|++++...+.+++
T Consensus 159 l~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~ 227 (294)
T PHA02882 159 VDG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWA 227 (294)
T ss_pred EcC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 985 7899999999998774322110 0101111224677788888877666778889999987776654
No 331
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.26 E-value=2.7e-11 Score=127.21 Aligned_cols=184 Identities=19% Similarity=0.216 Sum_probs=112.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|+||+|.+ .|+.||+|+........ ...+ +
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~------~ 46 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK----------------------------------MVKK------I 46 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc----------------------------------hhhH------H
Confidence 5799999999999999 48999999753211100 0011 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|.+-+..+ .+..-+.+..++ ......+++|||++|..+.++... ..+++...+...+.+ ..+..+|..|
T Consensus 47 ~~~e~~~l~~l----~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 47 AMREIRMLKQL----RHENLVNLIEVF-RRKKRLYLVFEFVDHTVLDDLEKY-PNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred HHHHHHHHHhc----CCcchhhHHHhc-ccCCeEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 22233222222 111111122222 223457999999999988876432 223455554444333 3367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||++++ ++.++++|||++..+...... .. ...+...+++++.... ...+...|++++...+.
T Consensus 121 i~h~~l~p~ni~~~~--~~~~~l~dfg~~~~~~~~~~~-~~-----~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 192 (286)
T cd07846 121 IIHRDIKPENILVSQ--SGVVKLCDFGFARTLAAPGEV-YT-----DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVT 192 (286)
T ss_pred ccccCCCHHHEEECC--CCcEEEEeeeeeeeccCCccc-cC-----cccceeeccCcHHhccccccCchHhHHHHHHHHH
Confidence 999999999999986 889999999999877554321 10 0112344555665532 23445679999987776
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 193 el~ 195 (286)
T cd07846 193 EML 195 (286)
T ss_pred HHH
Confidence 655
No 332
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.26 E-value=3.5e-11 Score=126.83 Aligned_cols=185 Identities=16% Similarity=0.085 Sum_probs=116.5
Q ss_pred ccccccceeEEEEEee-------cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-------KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-------~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
..+|.|++|.||+|.. ++..|++|....... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~---------------------------------------- 49 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-S---------------------------------------- 49 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH-H----------------------------------------
Confidence 5799999999999964 356888886521100 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh--------------cCCCHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE--------------LGVDRKR 437 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~--------------~g~d~~~ 437 (766)
..-+|.+|.+.+.++. ++++.-..-+.......+++|||++|++|.++..... ..++...
T Consensus 50 -~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~ 123 (280)
T cd05092 50 -ARQDFQREAELLTVLQ-----HQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQ 123 (280)
T ss_pred -HHHHHHHHHHHHhcCC-----CCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHH
Confidence 0124555555444432 2333222222333456799999999999988653211 1123333
Q ss_pred HHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 438 LGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 438 la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
+...+.+ ..+..+|..|++|+|++|.||++++ ++.++|.|||++..+......... ........+++++...
T Consensus 124 ~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~ 197 (280)
T cd05092 124 MLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ--GLVVKIGDFGMSRDIYSTDYYRVG----GRTMLPIRWMPPESIL 197 (280)
T ss_pred HHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC--CCCEEECCCCceeEcCCCceeecC----CCccccccccCHHHhc
Confidence 3333222 2367789999999999999999986 889999999998766432211110 1111234577788776
Q ss_pred cCCCCCCCCHHHHHHHHHHHH
Q 004234 516 MGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 516 lG~~~~~~D~~~l~~~i~~~l 536 (766)
.+..+...|++++...+.+++
T Consensus 198 ~~~~~~~~Di~slG~il~el~ 218 (280)
T cd05092 198 YRKFTTESDIWSFGVVLWEIF 218 (280)
T ss_pred cCCcCchhhHHHHHHHHHHHH
Confidence 666777889999987766654
No 333
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.26 E-value=5.2e-11 Score=128.81 Aligned_cols=191 Identities=16% Similarity=0.106 Sum_probs=115.3
Q ss_pred ccccc--ceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 300 PIAAA--SLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 300 PIgsa--SiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
-||.| +++.||+++. +|+.||||..+..... ++....+.
T Consensus 5 ~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~----------------------------------~~~~~~~~--- 47 (327)
T cd08227 5 VIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT----------------------------------NEMVTFLQ--- 47 (327)
T ss_pred hccccccceEEEEEEeecccCcEEEEEEechhhcc----------------------------------HHHHHHHH---
Confidence 47777 8899999998 6999999987322110 11111122
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
.|...+..+ ++++|.-..-+....+..++||||++|+++.++.... ..+++...+...+.+ ..+..+|.
T Consensus 48 ---~e~~~l~~l-----~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~ 119 (327)
T cd08227 48 ---GELHVSKLF-----NHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH 119 (327)
T ss_pred ---HHHHHHHhc-----CCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 233323222 2233322222333456789999999999999875322 223455444444333 34788899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChh-hHHHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCCHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN-IREGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVR 529 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~-~r~~l~~l~~a~~~~D~~~v~~~l~~lG--~~~~~~D~~~l~ 529 (766)
.|++|+|+||.||+++. ++.+++.|||....+... .......-+.....+...++++++...+ ..+...|++++.
T Consensus 120 ~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (327)
T cd08227 120 MGYVHRSVKASHILISV--DGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 197 (327)
T ss_pred CCEecCCCChhhEEEec--CCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHH
Confidence 99999999999999986 789999999876544221 1110000000111233456777777543 345678999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 198 ~il~el~~ 205 (327)
T cd08227 198 ITACELAN 205 (327)
T ss_pred HHHHHHHH
Confidence 87766653
No 334
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.26 E-value=6.7e-11 Score=121.59 Aligned_cols=182 Identities=13% Similarity=0.094 Sum_probs=116.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.++.|++|.||++.. +|+.++||......... . ....
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~------~~~~ 45 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ----------------------------------K------ERED 45 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccH----------------------------------H------HHHH
Confidence 5799999999999988 58999999874321100 0 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~---~~g~d~~~la~~lv~--~~l~qI 450 (766)
+..|...+..+ .+ +++ .+...+ ......++||||++|.+|.++.... ....+...+...+.+ ..+..+
T Consensus 46 ~~~e~~~l~~l----~~-~~i~~~~~~~-~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 119 (256)
T cd08530 46 AVNEIRILASV----NH-PNIISYKEAF-LDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL 119 (256)
T ss_pred HHHHHHHHHhC----CC-CCchhhhhhh-ccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 22233322222 11 221 122222 2235679999999999998864321 123444444343322 336788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
|..|++|+|++|.||++++ ++.++++|||++..+...... ...++..++.++.......++..|++++..
T Consensus 120 h~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~~~~~~~~~~--------~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~ 189 (256)
T cd08530 120 HEQKILHRDLKSANILLVA--NDLVKIGDLGISKVLKKNMAK--------TQIGTPHYMAPEVWKGRPYSYKSDIWSLGC 189 (256)
T ss_pred hhCCcccCCCCcceEEEec--CCcEEEeeccchhhhccCCcc--------cccCCccccCHHHHCCCCCCchhhHHHHHH
Confidence 9999999999999999986 789999999998877654111 123456677788876666667789999887
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 190 ~~~~l~ 195 (256)
T cd08530 190 LLYEMA 195 (256)
T ss_pred HHHHHH
Confidence 766554
No 335
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.26 E-value=1.4e-11 Score=139.43 Aligned_cols=184 Identities=17% Similarity=0.161 Sum_probs=128.1
Q ss_pred ccccccceeEEEEEee--c-C---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--K-G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~-G---~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+-+|+|.||.||+|++ . + .+||||..+-.- ...-.
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~---------------------------------------~~~~~ 203 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS---------------------------------------ELTKE 203 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccc---------------------------------------cccHH
Confidence 6799999999999999 2 3 238999663200 00011
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
+-.+|.+||+-|..| ++++|.--.-+.....+.+||||+|+|++|.+...-....++..+....... ..+.++
T Consensus 204 ~~~e~m~EArvMr~l-----~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YL 278 (474)
T KOG0194|consen 204 QIKEFMKEARVMRQL-----NHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYL 278 (474)
T ss_pred HHHHHHHHHHHHHhC-----CCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHH
Confidence 234788999988775 3344433333335667889999999999999976543333555554444443 458889
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~-l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
|..+++|||+-..|+|+.. ++.+++.||||+..-+...... .. .=-..+++|+.++.|..++.+|++++.
T Consensus 279 h~k~~IHRDIAARNcL~~~--~~~vKISDFGLs~~~~~~~~~~~~~-------klPirWLAPEtl~~~~~s~kTDV~sfG 349 (474)
T KOG0194|consen 279 HSKNCIHRDIAARNCLYSK--KGVVKISDFGLSRAGSQYVMKKFLK-------KLPIRWLAPETLNTGIFSFKTDVWSFG 349 (474)
T ss_pred HHCCCcchhHhHHHheecC--CCeEEeCccccccCCcceeeccccc-------cCcceecChhhhccCccccccchhhee
Confidence 9999999999999999985 6678999999977654211111 11 224677889999999999999999887
Q ss_pred HHHHHH
Q 004234 530 RTAQFF 535 (766)
Q Consensus 530 ~~i~~~ 535 (766)
..+.++
T Consensus 350 V~~~Ei 355 (474)
T KOG0194|consen 350 VLLWEI 355 (474)
T ss_pred eeEEee
Confidence 655443
No 336
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.25 E-value=5.4e-11 Score=119.78 Aligned_cols=176 Identities=20% Similarity=0.203 Sum_probs=114.8
Q ss_pred ceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Q 004234 305 SLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAA 382 (766)
Q Consensus 305 SiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~ 382 (766)
++|+||+|+. +|+.|++|+.+.+....- .-++..|++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----------------------------------------~~~~~~e~~ 39 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-----------------------------------------RERILREIS 39 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-----------------------------------------HHHHHHHHH
Confidence 5899999999 489999999855432110 113344444
Q ss_pred HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCC
Q 004234 383 NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADP 460 (766)
Q Consensus 383 Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDp 460 (766)
.+.++ .++++.-+.-+.......+++|||+++.+|.++..... ..+...+...+.+ ..+..+|..|++|+|+
T Consensus 40 ~~~~l-----~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i 113 (244)
T smart00220 40 ILKKL-----KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRG-RLSEDEARFYARQILSALEYLHSNGIIHRDL 113 (244)
T ss_pred HHHhC-----CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCc
Confidence 44433 11222111111112356899999999999988654322 1444444444333 3467889999999999
Q ss_pred CCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 461 HPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 461 HPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+|.||+++. ++.++++|||.+..+..... .....+.+.++.++....+..++..|++++...+..++
T Consensus 114 ~~~ni~~~~--~~~~~l~d~~~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~ 180 (244)
T smart00220 114 KPENILLDE--DGHVKLADFGLARQLDPGGL-------LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELL 180 (244)
T ss_pred CHHHeEECC--CCcEEEccccceeeeccccc-------cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 999999986 78999999999998876431 11123455677777777666777889999887665544
No 337
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.25 E-value=6.8e-12 Score=144.83 Aligned_cols=213 Identities=17% Similarity=0.209 Sum_probs=149.5
Q ss_pred hhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee--cC---eeEEEEEecCCccchHHHHHHHH
Q 004234 265 LQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL--KG---EEVVVKVQRPGLKDLFDIDLKNL 339 (766)
Q Consensus 265 Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G---~~VAVKVqrP~i~~~i~~Dl~il 339 (766)
...-+.|+.+++-.+.+. ||-+.++--+-.++ +.||+|.||.||+|+| .| ..||||.++-|..+.
T Consensus 603 ~k~YiDP~TYEDPnqAvr-eFakEId~s~i~Ie-~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gytek-------- 672 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVR-EFAKEIDPSCVKIE-KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEK-------- 672 (996)
T ss_pred ceeecCCccccCccHHHH-HhhhhcChhheEEE-EEEecccccceecccccCCCCcceeEEEeeeccCccHH--------
Confidence 556677888887666554 34433333222333 5899999999999999 34 579999987665433
Q ss_pred HHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCC
Q 004234 340 RVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPG 419 (766)
Q Consensus 340 ~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG 419 (766)
+..||+.||..|-+| ++|+|.--.-+---+...++++|||+.
T Consensus 673 ---------------------------------qrrdFL~EAsIMGQF-----dHPNIIrLEGVVTks~PvMIiTEyMEN 714 (996)
T KOG0196|consen 673 ---------------------------------QRRDFLSEASIMGQF-----DHPNIIRLEGVVTKSKPVMIITEYMEN 714 (996)
T ss_pred ---------------------------------HHhhhhhhhhhcccC-----CCCcEEEEEEEEecCceeEEEhhhhhC
Confidence 345899999988776 445544333333346677999999999
Q ss_pred CChhhhhhhhhcCCCHHHHHHH--HHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHH
Q 004234 420 IKINRIQSLDELGVDRKRLGRY--AVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEA 497 (766)
Q Consensus 420 ~~L~d~~~l~~~g~d~~~la~~--lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l 497 (766)
++|+.+.......+..-++... ++.+.++.+-..|++|||+-..||||+. +-..++.|||+.+.+.++.-..+...
T Consensus 715 GsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsDFGLSRvledd~~~~ytt~ 792 (996)
T KOG0196|consen 715 GSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSDFGLSRVLEDDPEAAYTTL 792 (996)
T ss_pred CcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEeccccceeecccCCCcccccc
Confidence 9999987665555655555544 5777789999999999999999999985 66889999999998866542222111
Q ss_pred HHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 498 FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 498 ~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
+ -+=-...-+++.+.....+...|++++.-
T Consensus 793 --G-GKIPiRWTAPEAIa~RKFTsASDVWSyGI 822 (996)
T KOG0196|consen 793 --G-GKIPIRWTAPEAIAYRKFTSASDVWSYGI 822 (996)
T ss_pred --C-CccceeecChhHhhhcccCchhhccccce
Confidence 0 00113455677777777788888887764
No 338
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.25 E-value=5.6e-11 Score=128.97 Aligned_cols=186 Identities=16% Similarity=0.097 Sum_probs=114.1
Q ss_pred ccccccceeEEEEEeec---------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~---------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 369 (766)
++||.|++|+||+|+.. +..||+|+.+...... ..
T Consensus 18 ~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~- 61 (334)
T cd05100 18 KPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDK-----------------------------------DL- 61 (334)
T ss_pred ceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHH-----------------------------------HH-
Confidence 68999999999999851 2368999764221110 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCC
Q 004234 370 VLYQEIDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGV 433 (766)
Q Consensus 370 ~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~ 433 (766)
-++.+|...+.++. .++++. +...+ ......+++|||++|++|.++..... ..+
T Consensus 62 -----~~~~~E~~~l~~l~----~h~~iv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l 131 (334)
T cd05100 62 -----SDLVSEMEMMKMIG----KHKNIINLLGAC-TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQL 131 (334)
T ss_pred -----HHHHHHHHHHHhhc----CCCCeeeeeEEE-ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccC
Confidence 12344444444432 223322 22222 23456799999999999988653211 112
Q ss_pred CHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHH
Q 004234 434 DRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQ 511 (766)
Q Consensus 434 d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~ 511 (766)
+...+...+ +-..+..+|..|++|+|++|.||+++. ++.++|+|||.+..+......... ........++++
T Consensus 132 ~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~--~~~~kL~Dfg~~~~~~~~~~~~~~----~~~~~~~~y~aP 205 (334)
T cd05100 132 TFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE--DNVMKIADFGLARDVHNIDYYKKT----TNGRLPVKWMAP 205 (334)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC--CCcEEECCcccceecccccccccc----cCCCcCceEcCH
Confidence 223322222 223367889999999999999999986 789999999998876542211000 001112346777
Q ss_pred HHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 512 AMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 512 ~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+....+..+...|++++...+.+++
T Consensus 206 E~~~~~~~~~~~Di~slG~il~el~ 230 (334)
T cd05100 206 EALFDRVYTHQSDVWSFGVLLWEIF 230 (334)
T ss_pred HHhccCCcCchhhhHHHHHHHHHHH
Confidence 7776666677789999987766554
No 339
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.25 E-value=3.5e-11 Score=131.59 Aligned_cols=190 Identities=19% Similarity=0.197 Sum_probs=115.0
Q ss_pred hhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH
Q 004234 289 LDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD 365 (766)
Q Consensus 289 ~eeiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~ 365 (766)
+.++-+.|+. ++||+|++|.||+|.. +|+.||||+........
T Consensus 12 ~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~---------------------------------- 57 (345)
T cd07877 12 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI---------------------------------- 57 (345)
T ss_pred HhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh----------------------------------
Confidence 3333344433 7899999999999997 59999999874321110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH
Q 004234 366 ECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR 440 (766)
Q Consensus 366 E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~ 440 (766)
..+-.+.+|...+.++. +..-+.+..++. +.....+++|+++ |..|.++.... .++...+..
T Consensus 58 ------~~~~~~~~Ei~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~ 124 (345)
T cd07877 58 ------IHAKRTYRELRLLKHMK----HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQF 124 (345)
T ss_pred ------HHHHHHHHHHHHHHHcC----CCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHH
Confidence 00112334555555442 211122222221 1123467888887 66777754322 234333333
Q ss_pred HHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-C
Q 004234 441 YAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-G 517 (766)
Q Consensus 441 ~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G 517 (766)
.+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||++......... ..+...+++++.... .
T Consensus 125 i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~ 193 (345)
T cd07877 125 LIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCELKILDFGLARHTDDEMTG---------YVATRWYRAPEIMLNWM 193 (345)
T ss_pred HHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCEEEecccccccccccccc---------cccCCCccCHHHHhCcc
Confidence 2222 3367889999999999999999986 889999999998876443211 122334556665543 3
Q ss_pred CCCCCCCHHHHHHHHHHHH
Q 004234 518 VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 518 ~~~~~~D~~~l~~~i~~~l 536 (766)
..++..|++++...+.+++
T Consensus 194 ~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 194 HYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred CCCchhhHHHHHHHHHHHH
Confidence 3456789999987776654
No 340
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.25 E-value=7e-11 Score=125.13 Aligned_cols=186 Identities=16% Similarity=0.134 Sum_probs=111.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||||..+...... + ..-.
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~------~~~~ 47 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE----------------------------------G------VPST 47 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccc----------------------------------c------chHH
Confidence 5799999999999998 58999999763211000 0 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
+.+|++.+.++. + +++.-..-+.......++||||+++ .+.+.... .....+...+...+ +-..+..+|..
T Consensus 48 ~~~e~~~l~~l~----h-~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 121 (294)
T PLN00009 48 AIREISLLKEMQ----H-GNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH 121 (294)
T ss_pred HHHHHHHHHhcc----C-CCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 344554444442 2 3322222222334568999999976 55554321 11112333322222 22346888999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|++|.||+++. .++.++++|||++..+...... + ....+...++.++.... .......|++++...+
T Consensus 122 ~i~H~dl~p~nill~~-~~~~~kl~dfg~~~~~~~~~~~-~-----~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~ 194 (294)
T PLN00009 122 RVLHRDLKPQNLLIDR-RTNALKLADFGLARAFGIPVRT-F-----THEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIF 194 (294)
T ss_pred CeeCCCCCcceEEEEC-CCCEEEEcccccccccCCCccc-c-----ccCceeecccCHHHHhCCCCCCcHHHHHHHHHHH
Confidence 9999999999999984 3567999999999765432111 0 00112345666776644 3346678999998777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 195 ~~l~t 199 (294)
T PLN00009 195 AEMVN 199 (294)
T ss_pred HHHHh
Confidence 66553
No 341
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.25 E-value=5.5e-11 Score=129.76 Aligned_cols=199 Identities=21% Similarity=0.223 Sum_probs=117.3
Q ss_pred HhCCChhhhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004234 284 ELGAPLDDVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (766)
Q Consensus 284 elG~~~eeiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~ 360 (766)
+.++...++...|.. .+||+|++|+||+|+. +|+.||||+........
T Consensus 5 ~~~~~~~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------------------------- 55 (343)
T cd07851 5 ELNKTVWEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA----------------------------- 55 (343)
T ss_pred hhccceecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-----------------------------
Confidence 334444444444543 7899999999999999 58999999874321110
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHH
Q 004234 361 VAIYDECASVLYQEIDYTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRL 438 (766)
Q Consensus 361 ~~i~~E~~~~l~~ElDf~~EA--~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~l 438 (766)
+....+.+|++..... .|+..+...+... -........++||||+ |.+|.++... ..++...+
T Consensus 56 -----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~ 120 (343)
T cd07851 56 -----IHAKRTYRELRLLKHMDHENVIGLLDVFTPA-------SSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHI 120 (343)
T ss_pred -----hHHHHHHHHHHHHHhccCCCHHHHHHHhhcc-------ccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHH
Confidence 0001111222222111 1222222211110 0001223479999998 5577776432 23444443
Q ss_pred HHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004234 439 GRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 516 (766)
Q Consensus 439 a~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l 516 (766)
...+.+ ..+..+|..|++|+|++|.||+++. ++.++|+|||++..+...... ......+++++....
T Consensus 121 ~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~kL~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~ 189 (343)
T cd07851 121 QFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCELKILDFGLARHTDDEMTG---------YVATRWYRAPEIMLN 189 (343)
T ss_pred HHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEccccccccccccccC---------CcccccccCHHHHhC
Confidence 333322 3467889999999999999999986 889999999999877543211 122344566766543
Q ss_pred C-CCCCCCCHHHHHHHHHHHHH
Q 004234 517 G-VLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 517 G-~~~~~~D~~~l~~~i~~~l~ 537 (766)
+ ..+...|++++...+.+++.
T Consensus 190 ~~~~~~~~DvwslGv~l~ellt 211 (343)
T cd07851 190 WMHYNQTVDIWSVGCIMAELLT 211 (343)
T ss_pred CCCCCchHhHHHHHHHHHHHHh
Confidence 2 34567899999877766553
No 342
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.24 E-value=7.4e-11 Score=123.43 Aligned_cols=182 Identities=19% Similarity=0.242 Sum_probs=112.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|+||+|+. +|+.||||+.+...... .+.+
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-----------------------------------------~~~~ 43 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-----------------------------------------EQVN 43 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCc-----------------------------------------hhhh
Confidence 4689999999999998 68999999864322110 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDY-VKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
...|...+.++. ++++ +.+...+.+- .+..+++|||++| ++.+........++...+...+.+ ..+..+|.
T Consensus 44 ~~~e~~~l~~l~----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~ 118 (282)
T cd07831 44 NLREIQALRRLS----PHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR 118 (282)
T ss_pred HHHHHHHHhhcC----CCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 122333333332 2232 2333333321 1567999999987 444433222223454444444433 34788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~ 531 (766)
.|++|+|++|.||+++. +.++++|||++..+....... ...+...+++++.... +..+...|++++...
T Consensus 119 ~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~ 188 (282)
T cd07831 119 NGIFHRDIKPENILIKD---DILKLADFGSCRGIYSKPPYT-------EYISTRWYRAPECLLTDGYYGPKMDIWAVGCV 188 (282)
T ss_pred CCceecccCHHHEEEcC---CCeEEEecccccccccCCCcC-------CCCCCcccCChhHhhcCCCCCcchhHHHHHHH
Confidence 99999999999999973 899999999998764322110 0113445666775433 455677899999877
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
+.+++
T Consensus 189 l~el~ 193 (282)
T cd07831 189 FFEIL 193 (282)
T ss_pred HHHHH
Confidence 66654
No 343
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.24 E-value=1.1e-10 Score=117.02 Aligned_cols=185 Identities=19% Similarity=0.172 Sum_probs=115.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++|++|++|+||++.. +++.|++|+.+..... ...-+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-----------------------------------------~~~~~ 43 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-----------------------------------------KQREE 43 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-----------------------------------------HHHHH
Confidence 6899999999999999 3799999987543211 00113
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
+.+|+..+.++ .++++.....+....+..+++|||++|.+|.++........+...+...+.+ ..+..+|..|
T Consensus 44 ~~~e~~~~~~~-----~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 118 (225)
T smart00221 44 FLREIRILKKL-----KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG 118 (225)
T ss_pred HHHHHHHHHhC-----CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 44455444444 1222222222223346789999999999998875432211344443333322 2367788999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~-~lG~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||+++. ++.++++|||....+....... .........++.+++. .....+...|++++...+.
T Consensus 119 i~h~di~~~ni~v~~--~~~~~l~d~g~~~~~~~~~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~ 191 (225)
T smart00221 119 IVHRDLKPENILLGM--DGLVKLADFGLARFIHRDLAAL-----LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILY 191 (225)
T ss_pred eecCCCCHHHEEEcC--CCCEEEeeCceeeEecCccccc-----ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHH
Confidence 999999999999986 6899999999998876543000 0001123345555555 3344455678888876555
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 192 ~l~ 194 (225)
T smart00221 192 ELL 194 (225)
T ss_pred HHH
Confidence 443
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.24 E-value=4.1e-11 Score=127.05 Aligned_cols=186 Identities=16% Similarity=0.137 Sum_probs=111.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|.|++|+||+|+. +|+.||||+.+...... . .+.+
T Consensus 13 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~----------------------------------~------~~~~ 52 (302)
T cd07864 13 GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE----------------------------------G------FPIT 52 (302)
T ss_pred eeecccCCEEEEEEEECCCCcEEEEEEEeeccccc----------------------------------C------chHH
Confidence 6799999999999999 58999999875432111 0 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec---------cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--H
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE---------YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--S 445 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e---------~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~ 445 (766)
+.+|...+.++. +..-+.+..++.+ ..+..+|+|||++| .+.+........++...+...+.+ .
T Consensus 53 ~~~e~~~~~~l~----h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~ 127 (302)
T cd07864 53 AIREIKILRQLN----HRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLE 127 (302)
T ss_pred HHHHHHHHHhCC----CCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 233443333331 1111111111111 12357899999998 444432222223454444443333 2
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCC
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGD 524 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D 524 (766)
.+..+|..|++|+|++|+||++++ ++.++++|||.+..+.......+.. ......++++++... ...++..|
T Consensus 128 aL~~LH~~~i~H~dl~p~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~~~~~~D 200 (302)
T cd07864 128 GLNYCHKKNFLHRDIKCSNILLNN--KGQIKLADFGLARLYNSEESRPYTN-----KVITLWYRPPELLLGEERYGPAID 200 (302)
T ss_pred HHHHHHhCCeecCCCCHHHEEECC--CCcEEeCcccccccccCCccccccc-----ceeccCccChHHhcCCCCCCchhH
Confidence 367889999999999999999985 8899999999998775433211100 011334555665543 23466789
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
++++...+.+++
T Consensus 201 i~slG~~~~el~ 212 (302)
T cd07864 201 VWSCGCILGELF 212 (302)
T ss_pred HHHHHHHHHHHH
Confidence 999887766554
No 345
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.24 E-value=5.3e-11 Score=142.13 Aligned_cols=143 Identities=21% Similarity=0.275 Sum_probs=92.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||||+.+..-... ..... .
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~---------------------------------~~~~~------~ 50 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN---------------------------------KNMVH------Q 50 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC---------------------------------HHHHH------H
Confidence 6899999999999999 49999999874321000 00111 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+..+ . ++++.-...........+|||||++|++|.++.... ..++...+...+ +-..+..+|..|
T Consensus 51 ~~~E~~~l~~l----~-hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 51 VQAERDALALS----K-SPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred HHHHHHHHHhc----C-CCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 22333333222 1 233222222223345689999999999999875321 122333222222 223478899999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
++|+|+||.|||++. ++.++|+|||++.....
T Consensus 125 IiHrDLKP~NILl~~--~g~vkL~DFGls~~~~~ 156 (669)
T cd05610 125 IIHRDLKPDNMLISN--EGHIKLTDFGLSKVTLN 156 (669)
T ss_pred EEeCCccHHHEEEcC--CCCEEEEeCCCCccccC
Confidence 999999999999985 89999999999986543
No 346
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.24 E-value=5.5e-11 Score=127.19 Aligned_cols=186 Identities=17% Similarity=0.111 Sum_probs=114.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|.. +|+.||+|+.+...... . ....
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~---------------------------~-------------~~~~ 52 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD---------------------------G-------------IPIS 52 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC---------------------------C-------------Ccch
Confidence 5799999999999998 59999999874321110 0 0011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccC-CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYT-TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s-t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|+..+.++ .+..-+.+..++.+-. +..++||||+++ ++.++.......++...+...+.+ ..+..+|..
T Consensus 53 ~~~E~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 127 (309)
T cd07845 53 SLREITLLLNL----RHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN 127 (309)
T ss_pred hhHHHHHHHhC----CCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22344434333 2322233444443222 457999999987 566654322223344443333322 347789999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|++|+||+++. ++.++|+|||++..+....... . -......+++++...- ...+...|++++...+
T Consensus 128 ~i~H~dl~p~nil~~~--~~~~kL~dfg~~~~~~~~~~~~-~-----~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il 199 (309)
T cd07845 128 FIIHRDLKVSNLLLTD--KGCLKIADFGLARTYGLPAKPM-T-----PKVVTLWYRAPELLLGCTTYTTAIDMWAVGCIL 199 (309)
T ss_pred CeecCCCCHHHEEECC--CCCEEECccceeeecCCccCCC-C-----cccccccccChhhhcCCCCcCchHHHHHHHHHH
Confidence 9999999999999986 8899999999998775432110 0 0011334566666542 3345678999998877
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 200 ~el~~ 204 (309)
T cd07845 200 AELLA 204 (309)
T ss_pred HHHHh
Confidence 66653
No 347
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.23 E-value=2.1e-11 Score=128.13 Aligned_cols=185 Identities=17% Similarity=0.168 Sum_probs=111.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||+|++|+||+|+. +|+.||||..+...... +. +-.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~------~~~ 45 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE----------------------------------GV------PST 45 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEcccccccc----------------------------------cc------chH
Confidence 6799999999999998 58999999774321100 00 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|++.+.++. +..-+.+...+ ......+++|||+++ ++.+.... ....++...+...+.+ ..+..+|..
T Consensus 46 ~~~E~~~l~~l~----h~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~ 119 (284)
T cd07860 46 AIREISLLKELN----HPNIVKLLDVI-HTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH 119 (284)
T ss_pred HHHHHHHHHhcC----CCCCcchhhhc-ccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 334444444432 21112222222 234567999999975 66664432 2233454444444333 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|++|+||+++. ++.++++|||.+..+......... ......++++++... ...+...|++++...+
T Consensus 120 ~i~H~~l~p~nill~~--~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il 191 (284)
T cd07860 120 RVLHRDLKPQNLLINT--EGAIKLADFGLARAFGVPVRTYTH------EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 191 (284)
T ss_pred CeecCCCCHHHEEECC--CCCEEEeeccchhhcccCcccccc------ccccccccCCeEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999986 889999999998766433221100 012334555554432 2235567999988777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 192 ~~l~t 196 (284)
T cd07860 192 AEMVT 196 (284)
T ss_pred HHHHH
Confidence 66553
No 348
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.23 E-value=5.7e-11 Score=126.05 Aligned_cols=190 Identities=16% Similarity=0.127 Sum_probs=113.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|++|+||+|.. +|+.||||+........ . + ...
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---------------------------~-------~------~~~ 57 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---------------------------G-------F------PIT 57 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---------------------------C-------c------hhH
Confidence 6899999999999998 58999999763221100 0 0 011
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee-------ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW-------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYL 447 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~-------e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l 447 (766)
+.+|.+.+.++. +..-+.+..++. ...+..++||||+.+ .+.+........++...+...+.+ ..+
T Consensus 58 ~~~e~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al 132 (310)
T cd07865 58 ALREIKILQLLK----HENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGL 132 (310)
T ss_pred HHHHHHHHHhCC----CCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 223444344332 222222222221 123446999999987 555543222223455444444333 347
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC-CCCCCCHH
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV-LVPTGDTT 526 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~-~~~~~D~~ 526 (766)
..+|.+|++|+|++|.||+++. ++.++++|||++..+....... ... .........++++++...+. ..+..|++
T Consensus 133 ~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~~~~-~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~ 208 (310)
T cd07865 133 YYIHRNKILHRDMKAANILITK--DGILKLADFGLARAFSLSKNSK-PNR-YTNRVVTLWYRPPELLLGERDYGPPIDMW 208 (310)
T ss_pred HHHHHCCeeccCCCHHHEEECC--CCcEEECcCCCcccccCCcccC-CCC-ccCcccCccccCcHHhcCCcccCchhhhH
Confidence 8899999999999999999985 8899999999998775433211 000 00011234456677654332 35678999
Q ss_pred HHHHHHHHHHH
Q 004234 527 AVRRTAQFFLN 537 (766)
Q Consensus 527 ~l~~~i~~~l~ 537 (766)
++...+.+++.
T Consensus 209 slG~~l~el~t 219 (310)
T cd07865 209 GAGCIMAEMWT 219 (310)
T ss_pred HHHHHHHHHHh
Confidence 99887766643
No 349
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=99.23 E-value=4.2e-10 Score=117.31 Aligned_cols=184 Identities=21% Similarity=0.210 Sum_probs=125.4
Q ss_pred cccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 300 PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+|.+|--|.||+|.. ++..|||||.+....+--.. -.+++. .|.+...+.+...++..+ -+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~--------~~Yi~g-d~Rf~~~~~~rr~lv~~W---------~~ 116 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRI--------RRYIQG-DPRFRNSRSNRRKLVFAW---------AR 116 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhH--------HHHHhc-ChhhhcCCCCHHHHHHHH---------HH
Confidence 899999999999998 79999999998766543221 222211 122222233444443333 25
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC---CHHHHHHHHHHHHHHHHHhCCc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV---DRKRLGRYAVESYLEQILSHGF 455 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~---d~~~la~~lv~~~l~qI~~~Gf 455 (766)
.|-+|+.+..+ .+|.+|+++. .-++||+|||+.... .-.-.+...+. +...+...+++.+-.+....|+
T Consensus 117 kEf~NL~R~~e-----AGVrvP~Pi~--~~~nVLvMEfIg~~g-~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~L 188 (268)
T COG1718 117 KEFRNLKRAYE-----AGVRVPEPIA--FRNNVLVMEFIGDDG-LPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGL 188 (268)
T ss_pred HHHHHHHHHHH-----cCCCCCCcee--ecCCeEEEEeccCCC-CCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCc
Confidence 68889999876 4699999994 568899999996541 11111222222 2334444455555555567999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 519 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~ 519 (766)
+|+|+..=|||+. ++.+.+||||.+..++...-. .++.+|...+..-+...|+-
T Consensus 189 VHgDLSEyNiL~~---~~~p~iID~~QaV~~~hp~a~-------e~L~RDv~Ni~~fF~r~gv~ 242 (268)
T COG1718 189 VHGDLSEYNILVH---DGEPYIIDVSQAVTIDHPNAF-------EFLERDVRNIARFFRRKGVE 242 (268)
T ss_pred ccccchhhheEEE---CCeEEEEECccccccCCCchH-------HHHHHHHHHHHHHHHHcCCC
Confidence 9999999999997 689999999999988765443 33567999999999888863
No 350
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.23 E-value=9.3e-11 Score=122.56 Aligned_cols=185 Identities=19% Similarity=0.202 Sum_probs=114.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.. +|+.|++|..++..... .. .-+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~------~~~ 44 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE----------------------------------GI------PKT 44 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccc----------------------------------hh------HHH
Confidence 4799999999999998 58999999875432211 00 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~~~G 454 (766)
+..|...+.++. +..-+.+...+ ...+..+++|||+++ ++.+........++...+...+. -..+..+|..|
T Consensus 45 ~~~e~~~l~~l~----~~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 118 (283)
T cd05118 45 ALREIKLLKELN----HPNIIKLLDVF-RHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG 118 (283)
T ss_pred HHHHHHHHHHhc----CCCcchHHHhh-ccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 222333333321 11111222222 223667999999987 66654332222344433332222 23367889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i~ 533 (766)
++|+|+||.||+++. ++.++++|||.+..+....+.. .....+..++.+++...+ ..+...|++++...+.
T Consensus 119 i~H~dl~p~nili~~--~~~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~ 190 (283)
T cd05118 119 ILHRDLKPENLLINT--EGVLKLADFGLARSFGSPVRPY------THYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFA 190 (283)
T ss_pred eeecCcCHHHEEECC--CCcEEEeeeeeeEecCCCcccc------cCccCcccccCcHHHhcCCCCCchhHHHHHHHHHH
Confidence 999999999999985 7899999999998886654111 011234455666666544 5567789999987766
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 191 ~l~t 194 (283)
T cd05118 191 ELLS 194 (283)
T ss_pred HHHh
Confidence 6553
No 351
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.23 E-value=7.7e-11 Score=122.83 Aligned_cols=194 Identities=12% Similarity=0.095 Sum_probs=118.6
Q ss_pred ccccccceeEEEEEee-c--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+.||.|++|.||+|.+ . ++.||||..+........ ... .... . .-
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~---------------------~~~-~~~~---~-------~~ 53 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGK---------------------DKR-ERDK---S-------IG 53 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccc---------------------ccc-cchH---H-------HH
Confidence 5799999999999999 3 688999987543221100 000 0000 0 01
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHHHH--HHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l---~~~g~d~~~la~~lv~--~~l~qI 450 (766)
++..|..-+. +.. +++++.-+.-+.......+++|||++|.+|.++... ....++...+...+.+ ..+..+
T Consensus 54 ~~~~e~~~l~---~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l 129 (269)
T cd08528 54 DIVSEVTIIK---EQL-RHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYL 129 (269)
T ss_pred HHHHHHHHHh---hcC-CCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHh
Confidence 2222322221 112 223333222222335678999999999999886421 1222344444433333 235677
Q ss_pred Hh-CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 451 LS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 451 ~~-~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
|. .|++|+|++|.||+++. ++.++++|||++........ .....+...++.+++...+..++..|++++.
T Consensus 130 h~~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~~~~~~~~-------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG 200 (269)
T cd08528 130 HKEKRIVHRDLTPNNIMLGE--DDKVTITDFGLAKQKQPESK-------LTSVVGTILYSCPEIVKNEPYGEKADVWAFG 200 (269)
T ss_pred ccCCceeecCCCHHHEEECC--CCcEEEecccceeecccccc-------cccccCcccCcChhhhcCCCCchHHHHHHHH
Confidence 74 68999999999999986 88999999999988765431 1112345556777777767777788999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 201 ~ll~~l~~ 208 (269)
T cd08528 201 CILYQMCT 208 (269)
T ss_pred HHHHHHHh
Confidence 77666543
No 352
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.22 E-value=1.1e-10 Score=142.15 Aligned_cols=188 Identities=12% Similarity=0.014 Sum_probs=118.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||.|+||.||+|+. .++.||+|+........ ... -.
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e----------------------------------~~~------~~ 58 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE----------------------------------REK------SQ 58 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH----------------------------------HHH------HH
Confidence 6899999999999999 58899999874321100 001 12
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhh---hcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLD---ELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~---~~g~d~~~la~~lv~--~~l~qI 450 (766)
|..|+..+..+. +..-|.+...+... ....+|||||++|++|.++.... ...++...+...+.+ ..|..+
T Consensus 59 ~~~EI~IL~~L~----HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYL 134 (1021)
T PTZ00266 59 LVIEVNVMRELK----HKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYC 134 (1021)
T ss_pred HHHHHHHHHHcC----CCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 334554444442 22222222322221 23468999999999999865321 122444444443333 236667
Q ss_pred Hh-------CCccccCCCCCcEEEeec---------------CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHH
Q 004234 451 LS-------HGFFHADPHPGNIAVDDV---------------NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADK 508 (766)
Q Consensus 451 ~~-------~GffHaDpHPGNILV~~~---------------~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~ 508 (766)
|. .+|+|+|+||.|||+... ..+.++|+|||++..+...... ....+++.+
T Consensus 135 Hs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~-------~s~vGTp~Y 207 (1021)
T PTZ00266 135 HNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA-------HSCVGTPYY 207 (1021)
T ss_pred HhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc-------cccCCCccc
Confidence 76 359999999999999631 1235899999999876543211 123467888
Q ss_pred HHHHHHHc--CCCCCCCCHHHHHHHHHHHHH
Q 004234 509 VLQAMVQM--GVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 509 v~~~l~~l--G~~~~~~D~~~l~~~i~~~l~ 537 (766)
++|+++.- ...++..|+++|...+.+++.
T Consensus 208 mAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 208 WSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 88988742 345677899999988877765
No 353
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.21 E-value=1.2e-10 Score=119.96 Aligned_cols=186 Identities=14% Similarity=0.122 Sum_probs=117.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+++|+|++|.||+|.. +|..||+|.....-... . .+-.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~------~~~~ 45 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV----------------------------------K------EKEA 45 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc----------------------------------h------hhHH
Confidence 6899999999999999 58999999762210000 0 0112
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~l~qI~~~ 453 (766)
+.+|...+..+. +..-+.+... .......+++|||++|.+|.+...... ...+...+.... +...+..+|..
T Consensus 46 ~~~E~~~l~~~~----h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (257)
T cd08225 46 SKKEVILLAKMK----HPNIVTFFAS-FQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120 (257)
T ss_pred HHHHHHHHHhCC----CCChhhhhhe-eccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 333444444332 1111122221 123456799999999999988653221 123433333332 22346788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
|++|+|++|.||++++ .+..++++|||.+..+....... ....+.+.+++++....+..+...|++++...+.
T Consensus 121 ~i~H~dl~~~nil~~~-~~~~~~l~d~~~~~~~~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~ 193 (257)
T cd08225 121 KILHRDIKSQNIFLSK-NGMVAKLGDFGIARQLNDSMELA------YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLY 193 (257)
T ss_pred CcccccCCHHHEEEcC-CCCeEEecccccchhccCCcccc------cccCCCccccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 9999999999999985 23457999999998775432211 1123566677888777777777889999987665
Q ss_pred HHH
Q 004234 534 FFL 536 (766)
Q Consensus 534 ~~l 536 (766)
+++
T Consensus 194 ~l~ 196 (257)
T cd08225 194 ELC 196 (257)
T ss_pred HHH
Confidence 554
No 354
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.21 E-value=1.4e-10 Score=122.35 Aligned_cols=181 Identities=17% Similarity=0.182 Sum_probs=111.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||+|++|.||++.. +|+.||||..+..... ..+.+
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----------------------------------------~~~~~ 48 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-----------------------------------------KEQKR 48 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-----------------------------------------HHHHH
Confidence 5799999999999998 5899999976322110 01223
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhh----hhcCCCHHHHHHHHHH--HHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSL----DELGVDRKRLGRYAVE--SYLE 448 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l----~~~g~d~~~la~~lv~--~~l~ 448 (766)
+.+|...+.++. ++++ +++++. ......+++|||+++ ++.++... ....++...+.....+ ..++
T Consensus 49 ~~~e~~~l~~~~----~~~~--iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 121 (288)
T cd06616 49 LLMDLDVVMRSS----DCPY--IVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALN 121 (288)
T ss_pred HHHHHHHHHHhc----CCCC--EeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 444554444432 1222 233322 234567999999875 44443211 1122344444333332 2366
Q ss_pred HHHh-CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC---CCCCCCC
Q 004234 449 QILS-HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG---VLVPTGD 524 (766)
Q Consensus 449 qI~~-~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG---~~~~~~D 524 (766)
.+|. .|++|+|++|.||+++. ++.++++|||++..+...... ....+...+++++....+ ..++..|
T Consensus 122 ~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~D 192 (288)
T cd06616 122 YLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGISGQLVDSIAK-------TRDAGCRPYMAPERIDPSARDGYDVRSD 192 (288)
T ss_pred HHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchhHHhccCCcc-------ccccCccCccCHHHhccccccCCcchhh
Confidence 7776 59999999999999986 789999999998765432111 011234556777777654 4567789
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
++++...+.+++
T Consensus 193 i~slG~il~el~ 204 (288)
T cd06616 193 VWSLGITLYEVA 204 (288)
T ss_pred hhHHHHHHHHHH
Confidence 999987666554
No 355
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.21 E-value=1.6e-10 Score=121.15 Aligned_cols=123 Identities=15% Similarity=0.072 Sum_probs=75.3
Q ss_pred CCeEEEEeecCCCChhhhhhhhhc---CCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecc
Q 004234 408 TPQILTMEYVPGIKINRIQSLDEL---GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGM 482 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~---g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGl 482 (766)
...++||||++|++|.++...... ..+...+...+ +...+..+|..|++|+|++|.||+++. ++.++++|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC--CccEEeccccc
Confidence 456999999999999886532211 11222222222 223467889999999999999999985 88999999998
Q ss_pred eeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-------CCCCCCCCHHHHHHHHHHHH
Q 004234 483 MGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-------GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 483 v~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-------G~~~~~~D~~~l~~~i~~~l 536 (766)
............. ........++++++... ...++..|++++...+.+++
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~ 202 (268)
T cd05086 146 GPSRYKEDYIETE----DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELF 202 (268)
T ss_pred ccccCcchhhhcc----cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHH
Confidence 7643221110000 00112334556665431 11245679999987766554
No 356
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.21 E-value=8.5e-11 Score=123.23 Aligned_cols=184 Identities=16% Similarity=0.167 Sum_probs=110.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.|+||......... .+..
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~-----------------------------------------~~~~ 43 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW-----------------------------------------EECM 43 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccch-----------------------------------------hHHH
Confidence 4689999999999999 48899999763221100 0001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
..+|...+.++ ..++++.-..-+.......++||||+ ++.+.+...... ..++...+...+.+ ..+..+|..
T Consensus 44 ~~~e~~~l~~~----~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~ 118 (283)
T cd07830 44 NLREVKSLRKL----NEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH 118 (283)
T ss_pred HHHHHHHHHhc----cCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11222222222 11122111111112256679999999 556665433221 23454444444333 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~~~D~~~l~~~i 532 (766)
|++|+|++|+||++++ ++.++|+|||.+..+....... -..++..+++++... ....+...|++++...+
T Consensus 119 ~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~~~~~~~~-------~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l 189 (283)
T cd07830 119 GFFHRDLKPENLLVSG--PEVVKIADFGLAREIRSRPPYT-------DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIM 189 (283)
T ss_pred CcccCCCChhhEEEcC--CCCEEEeecccceeccCCCCcC-------CCCCcccccCceeeecCcCcCCccchhhHHHHH
Confidence 9999999999999986 8999999999998775432110 011234455566443 33456778999998777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 190 ~el~~ 194 (283)
T cd07830 190 AELYT 194 (283)
T ss_pred HHHHh
Confidence 66553
No 357
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.21 E-value=1.3e-10 Score=121.93 Aligned_cols=186 Identities=13% Similarity=0.101 Sum_probs=118.9
Q ss_pred ccccccceeEEEEEee-c-----CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-K-----GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~-----G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
+-||.|++|.||+|.. . +..|++|+.+......
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~----------------------------------------- 50 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEI----------------------------------------- 50 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHH-----------------------------------------
Confidence 5799999999999998 4 5889999874322111
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCccc-cceeeeccCCCeEEEEeecCCCChhhhhhhhh-------cCCCHHHHHHHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDYVK-VPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------LGVDRKRLGRYAVE 444 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~V~-vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------~g~d~~~la~~lv~ 444 (766)
+.-++.+|+..+.++ +++++. +.....+.....++++||+++++|.++..... ..++...+...+.+
T Consensus 51 ~~~~~~~e~~~l~~l-----~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~ 125 (280)
T cd05043 51 QVTLLLQESCLLYGL-----SHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQ 125 (280)
T ss_pred HHHHHHHHHHHHHhC-----CCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 111334455444433 223332 22222222356799999999999988653321 12344444433332
Q ss_pred --HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004234 445 --SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 522 (766)
Q Consensus 445 --~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~ 522 (766)
..+..+|..|++|+|++|.||+++. ++.++++|||+++.+.+....... ....+...+++++.......+..
T Consensus 126 i~~~l~~LH~~~i~H~di~p~nil~~~--~~~~kl~d~g~~~~~~~~~~~~~~----~~~~~~~~y~apE~~~~~~~~~~ 199 (280)
T cd05043 126 IACGMSYLHKRGVIHKDIAARNCVIDE--ELQVKITDNALSRDLFPMDYHCLG----DNENRPVKWMALESLVNKEYSSA 199 (280)
T ss_pred HHHHHHHHHHCCEeecccCHhhEEEcC--CCcEEECCCCCcccccCCceEEeC----CCCCcchhccCHHHHhcCCCCch
Confidence 3367889999999999999999985 789999999999876443211100 01122345677777766667778
Q ss_pred CCHHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFFL 536 (766)
Q Consensus 523 ~D~~~l~~~i~~~l 536 (766)
.|++++...+.+++
T Consensus 200 ~Di~slG~~l~el~ 213 (280)
T cd05043 200 SDVWSFGVLLWELM 213 (280)
T ss_pred hhHHHhHHHHHHHh
Confidence 89999987766554
No 358
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.21 E-value=4.2e-11 Score=127.09 Aligned_cols=192 Identities=13% Similarity=0.083 Sum_probs=111.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+......... ...+
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----------------------------------------~~~~ 53 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG----------------------------------------FPIT 53 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC----------------------------------------cchh
Confidence 6799999999999998 589999998743321110 0012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec-------cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE-------YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYL 447 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-------~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l 447 (766)
+.+|...+.++. +..-+.+...+.+ .....+++|||+++. +.+.........+...+...+.+ ..+
T Consensus 54 ~~~e~~~l~~l~----h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al 128 (311)
T cd07866 54 ALREIKILKKLK----HPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGI 128 (311)
T ss_pred HHHHHHHHHhcC----CCCccchhhheecccccccccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence 233444333331 2111222222211 122358999999874 33322212223444444443332 347
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHH-----HHHHHhhcCHHHHHHHHHHcC-CCCC
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLE-----AFYGIYEKDADKVLQAMVQMG-VLVP 521 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~-----l~~a~~~~D~~~v~~~l~~lG-~~~~ 521 (766)
..+|..|++|+|++|+||++++ ++.++++|||++..+.......... .......++..++++++...+ ...+
T Consensus 129 ~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 206 (311)
T cd07866 129 NYLHENHILHRDIKAANILIDN--QGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTT 206 (311)
T ss_pred HHHHhCCeecCCCCHHHEEECC--CCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCc
Confidence 7889999999999999999986 8899999999998765432111000 000011224446677765432 3456
Q ss_pred CCCHHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFLN 537 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l~ 537 (766)
..|++++...+.+++.
T Consensus 207 ~~Dv~slG~il~el~~ 222 (311)
T cd07866 207 AVDIWGIGCVFAEMFT 222 (311)
T ss_pred hhHhHHHHHHHHHHHh
Confidence 7899999887766653
No 359
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.20 E-value=1.4e-10 Score=123.25 Aligned_cols=184 Identities=18% Similarity=0.216 Sum_probs=108.9
Q ss_pred ccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+|+|++|.||+|... |+.||||+.+...... -...+..|+
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------------------------------~~~~~~~e~- 64 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-----------------------------------ENKRILMDL- 64 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH-----------------------------------HHHHHHHHH-
Confidence 78999999999999993 9999999874321110 000011111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHh-C
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILS-H 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~-~ 453 (766)
..+.+ .. +++++.-..-+.......+++|||+++ .+.++.......++...+.....+ ..+..+|. .
T Consensus 65 -----~~~~~---~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 134 (296)
T cd06618 65 -----DVVLK---SH-DCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKH 134 (296)
T ss_pred -----HHHHh---cc-CCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 11111 11 122211111111224567999999976 455543322223343333333222 23567785 6
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC----CCCCCCHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV----LVPTGDTTAVR 529 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~----~~~~~D~~~l~ 529 (766)
|++|+|++|.||+++. ++.++|+|||++..+....... ...+...+++++...... .+...|++++.
T Consensus 135 ~i~H~dl~p~nill~~--~~~~kL~dfg~~~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG 205 (296)
T cd06618 135 GVIHRDVKPSNILLDA--SGNVKLCDFGISGRLVDSKAKT-------RSAGCAAYMAPERIDPPDPNPKYDIRADVWSLG 205 (296)
T ss_pred CEecCCCcHHHEEEcC--CCCEEECccccchhccCCCccc-------CCCCCccccCHhhcCCCCCccccccchhHHHHH
Confidence 9999999999999985 8899999999998775432211 012345567777765432 55678999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 206 ~il~el~~ 213 (296)
T cd06618 206 ISLVELAT 213 (296)
T ss_pred HHHHHHHh
Confidence 77766653
No 360
>PRK10345 hypothetical protein; Provisional
Probab=99.20 E-value=1.4e-10 Score=119.53 Aligned_cols=142 Identities=10% Similarity=0.103 Sum_probs=89.7
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
.++||+|++|.||.-..++.. +||+.+++-... .+ ++
T Consensus 7 ~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~------------------------------------~~------~~ 43 (210)
T PRK10345 7 QSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGG------------------------------------DK------EI 43 (210)
T ss_pred cceecCCCceEEEECCCCcCe-EEEEEeccccch------------------------------------HH------HH
Confidence 478999999999962224555 699885532100 01 23
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCe------EEEEee--cCCCChhhhhhhhhcCCCH-HHHHHHHHHHHHH
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQ------ILTMEY--VPGIKINRIQSLDELGVDR-KRLGRYAVESYLE 448 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~------vLVMEy--ieG~~L~d~~~l~~~g~d~-~~la~~lv~~~l~ 448 (766)
.+|.+.+..+.+.-.+ +-.||++|..+.+.. .++||| ++|++|.++.... .++. ......++..+++
T Consensus 44 ~rEi~~l~~L~~~~~~--h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~~~~~~~~L~~l~~ 119 (210)
T PRK10345 44 RRELKYYAHLSRRLID--WSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEEDVAQLRQLLKKLKR 119 (210)
T ss_pred HHHHHHHHHhhccCCC--CcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHhHHHHHHHHHHHHH
Confidence 4444444444332222 334677776555542 278999 5579999976432 2222 2234556667778
Q ss_pred HHHhCCccccCCCCCcEEEeecC--CCcEEEEeecceecc
Q 004234 449 QILSHGFFHADPHPGNIAVDDVN--GGRLIFYDFGMMGSI 486 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~--~g~l~LiDFGlv~~L 486 (766)
.+|.+|++|+|+||.||+++..+ +++++|+||+-...+
T Consensus 120 yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~ 159 (210)
T PRK10345 120 YLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF 159 (210)
T ss_pred HHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence 99999999999999999997422 347999995544444
No 361
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.20 E-value=5.9e-11 Score=137.04 Aligned_cols=148 Identities=11% Similarity=0.028 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcC----CCHHHHHHHH--HHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG----VDRKRLGRYA--VESYLE 448 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g----~d~~~la~~l--v~~~l~ 448 (766)
.+.+|+..+.++. +++| .+-.++ +.....+++||++.+. +.+........ .....+...+ +-..+.
T Consensus 209 ~~~~Ei~il~~l~-----HpnIv~l~~~~-~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~ 281 (501)
T PHA03210 209 QLENEILALGRLN-----HENILKIEEIL-RSEANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVE 281 (501)
T ss_pred HHHHHHHHHHhCC-----CCCcCcEeEEE-EECCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHH
Confidence 4556766666552 2332 232222 3456679999998764 33322111100 1111121121 223478
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
.+|..|++|+|+||.|||++. ++.++|+|||++..+....... ..-..++..++++++..-+......|++++
T Consensus 282 yLH~~gIiHrDLKP~NILl~~--~~~vkL~DFGla~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 354 (501)
T PHA03210 282 YIHDKKLIHRDIKLENIFLNC--DGKIVLGDFGTAMPFEKEREAF-----DYGWVGTVATNSPEILAGDGYCEITDIWSC 354 (501)
T ss_pred HHHhCCeecCCCCHHHEEECC--CCCEEEEeCCCceecCcccccc-----cccccCCcCCCCchhhcCCCCCcHHHHHHH
Confidence 899999999999999999986 8999999999998875432110 001235666777888776666777899999
Q ss_pred HHHHHHHHH
Q 004234 529 RRTAQFFLN 537 (766)
Q Consensus 529 ~~~i~~~l~ 537 (766)
...+.+++.
T Consensus 355 Gvil~ell~ 363 (501)
T PHA03210 355 GLILLDMLS 363 (501)
T ss_pred HHHHHHHHH
Confidence 988777663
No 362
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.19 E-value=6.3e-11 Score=131.06 Aligned_cols=177 Identities=18% Similarity=0.150 Sum_probs=114.7
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+-+|+|.||.||+|.++++.||||+..+.-.+....+-+| .... .
T Consensus 216 eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~I---------------------------------y~lp--~ 260 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNI---------------------------------YSLP--G 260 (534)
T ss_pred HHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHH---------------------------------Hhcc--C
Confidence 4689999999999999999999998754333332222111 1111 2
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHh---
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILS--- 452 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~---la~~lv~~~l~qI~~--- 452 (766)
.+..|+.+|-..=+.. .....+-+||+||-+-++|.++.. ..-++... ++..+++ .+..+|+
T Consensus 261 m~h~nIl~Fi~~ekr~---------t~~~~eywLVt~fh~kGsL~dyL~--~ntisw~~~cria~Smar-GLa~LHee~p 328 (534)
T KOG3653|consen 261 MKHENILQFIGAEKRG---------TADRMEYWLVTEFHPKGSLCDYLK--ANTISWNSLCRIAESMAR-GLAHLHEELP 328 (534)
T ss_pred ccchhHHHhhchhccC---------CccccceeEEeeeccCCcHHHHHH--hccccHHHHHHHHHHHHH-HHHHhcccCC
Confidence 3444666663221111 011235689999999999999854 33344433 3333333 3555663
Q ss_pred ------CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHH
Q 004234 453 ------HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 526 (766)
Q Consensus 453 ------~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~ 526 (766)
.+|.|||+|..||||.. |+..+|.|||++..+++..-..-.. .--++..||++++++-.+--. |..
T Consensus 329 ~~d~~Kp~IaHRDlkSkNVLvK~--DlTccIaDFGLAl~~~p~~~~~d~~----~qVGT~RYMAPEvLEgainl~--d~~ 400 (534)
T KOG3653|consen 329 RGDHHKPPIAHRDLKSKNVLVKN--DLTCCIADFGLALRLEPGKPQGDTH----GQVGTRRYMAPEVLEGAINLQ--DRD 400 (534)
T ss_pred cCCCCCCccccccccccceEEcc--CCcEEeeccceeEEecCCCCCcchh----hhhhhhhhcCHHHHhhhcccc--cHH
Confidence 46999999999999985 9999999999999998754433211 134788999999998654332 244
Q ss_pred HHHH
Q 004234 527 AVRR 530 (766)
Q Consensus 527 ~l~~ 530 (766)
+|++
T Consensus 401 Afkr 404 (534)
T KOG3653|consen 401 AFKR 404 (534)
T ss_pred HHHH
Confidence 5544
No 363
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.19 E-value=2.6e-10 Score=119.39 Aligned_cols=188 Identities=19% Similarity=0.166 Sum_probs=115.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+.+...... ... .+
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~~------~~ 44 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE----------------------------------GIP------LS 44 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccc----------------------------------hhh------hh
Confidence 5689999999999999 48999999885432211 000 01
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec----cCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQ 449 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~q 449 (766)
+.+|...+.++.. ..+..-+.+...+.. .+...+++|||+++ .+.+..... ...++...+...+.+ ..+..
T Consensus 45 ~~~e~~~l~~l~~-~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~ 122 (287)
T cd07838 45 TLREIALLKQLES-FEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDF 122 (287)
T ss_pred HHHHHHHHHHhhc-cCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHH
Confidence 2223322233221 111111222222211 11237899999987 566643321 223444444443333 34678
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+|..|++|+|++|+||+++. ++.++|+|||.+..++...... . ......+++++....+..+...|.+++.
T Consensus 123 LH~~~i~h~~l~~~nili~~--~~~~~l~dfg~~~~~~~~~~~~------~-~~~~~~~~~PE~~~~~~~~~~~Di~s~G 193 (287)
T cd07838 123 LHSHRIVHRDLKPQNILVTS--DGQVKIADFGLARIYSFEMALT------S-VVVTLWYRAPEVLLQSSYATPVDMWSVG 193 (287)
T ss_pred HHHCCeeeccCChhhEEEcc--CCCEEEeccCcceeccCCcccc------c-ccccccccChHHhccCCCCCcchhhhHH
Confidence 89999999999999999986 7999999999998875432110 0 1124456677777766677788999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 194 ~~l~~l~~ 201 (287)
T cd07838 194 CIFAELFR 201 (287)
T ss_pred HHHHHHHh
Confidence 87776653
No 364
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.19 E-value=1.8e-10 Score=120.43 Aligned_cols=183 Identities=12% Similarity=0.088 Sum_probs=114.8
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
.-+|.|++|.||+|+.. .+.|++|+....-.+ ...
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~-------------------------------~~~------- 52 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDE-------------------------------NLQ------- 52 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccch-------------------------------HHH-------
Confidence 56999999999999962 367999965221000 000
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhc--------CCCHHHHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDEL--------GVDRKRLGRY 441 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~--------g~d~~~la~~ 441 (766)
-+|.+|++.+.++. + ++ +++++. ......++||||++|++|.++...... .+....+...
T Consensus 53 ---~~~~~E~~~l~~l~----h-~~--iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~ 122 (275)
T cd05046 53 ---SEFRRELDMFRKLS----H-KN--VVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL 122 (275)
T ss_pred ---HHHHHHHHHHHhcC----C-cc--eeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHH
Confidence 13455665555542 2 22 233332 223467999999999999987543221 2344443333
Q ss_pred HH--HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC
Q 004234 442 AV--ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL 519 (766)
Q Consensus 442 lv--~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~ 519 (766)
+. ...+..+|..|++|+|++|.||+++. ++.+++.|||+.............. ......++.++....+..
T Consensus 123 ~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~y~~PE~~~~~~~ 195 (275)
T cd05046 123 CTQIALGMDHLSNARFVHRDLAARNCLVSS--QREVKVSLLSLSKDVYNSEYYKLRN-----ALIPLRWLAPEAVQEDDF 195 (275)
T ss_pred HHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcEEEcccccccccCcccccccCC-----ceeEEeecChhhhccCCC
Confidence 32 23468899999999999999999986 8899999999987553321111000 011233666777666666
Q ss_pred CCCCCHHHHHHHHHHHH
Q 004234 520 VPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 520 ~~~~D~~~l~~~i~~~l 536 (766)
.+..|++++...+.+++
T Consensus 196 ~~~~Di~slG~~l~~l~ 212 (275)
T cd05046 196 STKSDVWSFGVLMWEVF 212 (275)
T ss_pred CchhhHHHHHHHHHHHH
Confidence 77789999987766554
No 365
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.19 E-value=1.9e-10 Score=119.92 Aligned_cols=185 Identities=16% Similarity=0.153 Sum_probs=113.1
Q ss_pred ccccccceeEEEEEee-----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+.||.|++|.||+|.+ +|+.||||+...+..... .
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~----------------------------------------~ 44 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSS----------------------------------------D 44 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChH----------------------------------------H
Confidence 5799999999999986 268999998855432210 0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--------CCeEEEEeecCCCChhhhhhhhhc-----CCCHHHHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--------TPQILTMEYVPGIKINRIQSLDEL-----GVDRKRLGR 440 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--------t~~vLVMEyieG~~L~d~~~l~~~-----g~d~~~la~ 440 (766)
.-++.+|.+.+.++. +++ +.+.+.... ...++++||.+++++.+....... ..+...+..
T Consensus 45 ~~~~~~E~~~l~~l~-----h~~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 117 (273)
T cd05074 45 IEEFLREAACMKEFD-----HPN--VIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVR 117 (273)
T ss_pred HHHHHHHHHHHhcCC-----CCC--cceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHH
Confidence 112344544444331 222 233332111 123789999999998875432211 123333333
Q ss_pred HHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004234 441 YAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 518 (766)
Q Consensus 441 ~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~ 518 (766)
.+.+ ..+..+|..|++|+|++|.||+++. ++.++++|||.+..+......... ........++.++....+.
T Consensus 118 ~~~~i~~~l~~lH~~~i~H~dikp~nili~~--~~~~kl~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~pe~~~~~~ 191 (273)
T cd05074 118 FMIDIASGMEYLSSKNFIHRDLAARNCMLNE--NMTVCVADFGLSKKIYSGDYYRQG----CASKLPVKWLALESLADNV 191 (273)
T ss_pred HHHHHHHHHHHHHhCCEeecccchhhEEEcC--CCCEEECcccccccccCCcceecC----CCccCchhhcCHhHHhcCc
Confidence 2222 3367889999999999999999985 789999999998876432210000 0011224455666666666
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l 536 (766)
.+...|++++...+.+++
T Consensus 192 ~~~~sDi~slG~il~el~ 209 (273)
T cd05074 192 YTTHSDVWAFGVTMWEIM 209 (273)
T ss_pred cchhhhhHHHHHHHHHHh
Confidence 677789999987766554
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.19 E-value=1.1e-10 Score=126.54 Aligned_cols=186 Identities=17% Similarity=0.126 Sum_probs=112.5
Q ss_pred ccccccceeEEEEEee--c--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.||+|++|.||+|+. . |..||||+.+...... .. .
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~----------------------------------~~------~ 45 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK----------------------------------IL------A 45 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc----------------------------------hh------H
Confidence 5789999999999998 4 7799999873221110 00 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeee------ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFW------EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SY 446 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~------e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~ 446 (766)
-++.+|...+.++. ++++ +++.+. .-....+++|||+++ .|.+... ....++...+...+.+ ..
T Consensus 46 ~~~~~E~~~l~~l~----~h~~--iv~~~~~~~~~~~~~~~~~~~~e~~~~-~L~~~l~-~~~~~~~~~~~~~~~qi~~a 117 (332)
T cd07857 46 KRALRELKLLRHFR----GHKN--ITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIR-SGQPLTDAHFQSFIYQILCG 117 (332)
T ss_pred HHHHHHHHHHHHhc----CCCC--hheeeeeeeeccccCCcEEEEEecccC-CHHHHHh-cCCCCCHHHHHHHHHHHHHH
Confidence 12334444444432 2222 222221 112346899999875 6666432 2223444444443333 34
Q ss_pred HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCH
Q 004234 447 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDT 525 (766)
Q Consensus 447 l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~ 525 (766)
+..+|..|++|+|+||+||+++. ++.++|+|||++..+.......... ..-..++..+++++....+ ..+...|+
T Consensus 118 L~~LH~~givH~dlkp~Nili~~--~~~~kl~Dfg~a~~~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 118 LKYIHSANVLHRDLKPGNLLVNA--DCELKICDFGLARGFSENPGENAGF--MTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred HHHHHhCCcccCCCCHHHeEEcC--CCCEEeCcCCCceeccccccccccc--ccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 77889999999999999999986 8899999999998776432211000 0111235556777765432 34566799
Q ss_pred HHHHHHHHHHH
Q 004234 526 TAVRRTAQFFL 536 (766)
Q Consensus 526 ~~l~~~i~~~l 536 (766)
+++...+.+++
T Consensus 194 ~slGv~l~~l~ 204 (332)
T cd07857 194 WSVGCILAELL 204 (332)
T ss_pred HHHHHHHHHHH
Confidence 99887666554
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.18 E-value=1.8e-10 Score=120.33 Aligned_cols=184 Identities=18% Similarity=0.149 Sum_probs=113.7
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|.+|.||+|+. +|+.|++|+......+. .+...+..|
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~~~~~e-- 48 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEE----------------------------------GIPSTALRE-- 48 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccc----------------------------------cccHHHHHH--
Confidence 4689999999999999 49999999986543110 000011112
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.-+.++ . ++++ .+...+ ......+++|||+++ +|.++........+...+...+.+ ..+..+|..
T Consensus 49 ----~~~l~~~----~-~~~i~~~~~~~-~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 117 (282)
T cd07829 49 ----ISLLKEL----K-HPNIVKLLDVI-HTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH 117 (282)
T ss_pred ----HHHHHhc----C-CCCHHHHHhhh-hcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2212211 1 1111 111122 123567999999986 787765432223444444333322 346789999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~i 532 (766)
|++|+|++|.||++++ ++.+++.|||.+..+.......- ....+..++++++...+ ..++..|++++...+
T Consensus 118 ~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~~~~~~~~~~------~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l 189 (282)
T cd07829 118 RILHRDLKPQNILINR--DGVLKLADFGLARAFGIPLRTYT------HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIF 189 (282)
T ss_pred CcccCCCChheEEEcC--CCCEEEecCCcccccCCCccccC------ccccCcCcCChHHhcCCcCCCccccHHHHHHHH
Confidence 9999999999999986 78999999999887754432110 01123345666666554 567778999998777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 190 ~~l~~ 194 (282)
T cd07829 190 AEMIT 194 (282)
T ss_pred HHHHh
Confidence 66553
No 368
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.18 E-value=1.7e-10 Score=133.16 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=55.7
Q ss_pred CCeEEEEeecCCCChhhhhhhhhc-----------------------CCCHHHHHHHH--HHHHHHHHHhCCccccCCCC
Q 004234 408 TPQILTMEYVPGIKINRIQSLDEL-----------------------GVDRKRLGRYA--VESYLEQILSHGFFHADPHP 462 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~-----------------------g~d~~~la~~l--v~~~l~qI~~~GffHaDpHP 462 (766)
...+|||||+++++|.++...... ..+...+...+ +...+..+|..|++|+|+||
T Consensus 258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp 337 (507)
T PLN03224 258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP 337 (507)
T ss_pred CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence 457999999999999886532110 01111111111 22346778999999999999
Q ss_pred CcEEEeecCCCcEEEEeecceeccCh
Q 004234 463 GNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 463 GNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
+||+++. ++.++++|||++..+..
T Consensus 338 ~NILl~~--~~~~kL~DFGla~~~~~ 361 (507)
T PLN03224 338 ENLLVTV--DGQVKIIDFGAAVDMCT 361 (507)
T ss_pred HhEEECC--CCcEEEEeCcCcccccc
Confidence 9999986 78999999999876543
No 369
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.18 E-value=4.8e-11 Score=134.30 Aligned_cols=187 Identities=20% Similarity=0.196 Sum_probs=129.4
Q ss_pred ccccccceeEEEEEeecC-eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKG-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G-~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+.||+|-||.||.+...| ..||||..||+..+.. --||
T Consensus 544 ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~-----------------------------------------r~~F 582 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNA-----------------------------------------RNDF 582 (807)
T ss_pred hhhcCcccceeEEEEecCceEEEEeecCcccchhH-----------------------------------------HHHH
Confidence 579999999999999964 9999999999864431 1378
Q ss_pred HHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcC-CCHHHHHHHH--HHHHHHHHHhC
Q 004234 378 TQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRYA--VESYLEQILSH 453 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g-~d~~~la~~l--v~~~l~qI~~~ 453 (766)
..|++-+.+++ + |+| .+--| .--....+++|||++.+.|+++....... .+........ +.+.+..+-..
T Consensus 583 ~kEIkiLsqLk----h-PNIveLvGV-C~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~ 656 (807)
T KOG1094|consen 583 LKEIKILSRLK----H-PNIVELLGV-CVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL 656 (807)
T ss_pred HHHHHHHhccC----C-CCeeEEEee-eecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence 88888777762 3 332 22211 11234568999999999999965322111 2323333332 23346667789
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
+|+|+|+.|.|+|++. ++++++.||||++.+-..+.... .+-.---..+|+.+-+-+|-.+...|+.+|...+.
T Consensus 657 nfVHrd~a~rNcLv~~--e~~iKiadfgmsR~lysg~yy~v----qgr~vlpiRwmawEsillgkFttaSDvWafgvTlw 730 (807)
T KOG1094|consen 657 NFVHRDLATRNCLVDG--EFTIKIADFGMSRNLYSGDYYRV----QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLW 730 (807)
T ss_pred chhhccccccceeecC--cccEEecCcccccccccCCceee----ecceeeeeeehhHHHHHhccccchhhhhhhHHHHH
Confidence 9999999999999986 88999999999997643322111 00011135677888888999999999999998887
Q ss_pred HHHHH
Q 004234 534 FFLNS 538 (766)
Q Consensus 534 ~~l~~ 538 (766)
+++..
T Consensus 731 E~~~~ 735 (807)
T KOG1094|consen 731 EVFML 735 (807)
T ss_pred HHHHH
Confidence 66543
No 370
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.16 E-value=1e-10 Score=122.81 Aligned_cols=185 Identities=19% Similarity=0.194 Sum_probs=112.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|.. +|+.||||+.+.+.... .... +
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~----------------------------------~~~~------~ 44 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE----------------------------------GVPS------T 44 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc----------------------------------cchh------H
Confidence 5689999999999998 69999999874332110 0000 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+.++. +..-+.+...+. .....+++|||+++ ++.++..... ..++...+.....+ ..+..+|..
T Consensus 45 ~~~E~~~l~~l~----~~~iv~~~~~~~-~~~~~~iv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~ 118 (283)
T cd07835 45 AIREISLLKELN----HPNIVRLLDVVH-SENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH 118 (283)
T ss_pred HHHHHHHHHhcC----CCCccCHhheec-cCCeEEEEEeccCc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 233443333332 222222222222 23567999999965 6776543221 23444444443332 336788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i 532 (766)
|++|+|++|+||+++. ++.++++|||++..+....+.... ......+++++.... ...+...|++++...+
T Consensus 119 ~~~H~dl~p~nil~~~--~~~~~l~df~~~~~~~~~~~~~~~------~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l 190 (283)
T cd07835 119 RVLHRDLKPQNLLIDR--EGALKLADFGLARAFGVPVRTYTH------EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIF 190 (283)
T ss_pred CeeCCCCCHHHEEEcC--CCcEEEeecccccccCCCccccCc------cccccCCCCCceeecCcccCcHHHHHHHHHHH
Confidence 9999999999999986 889999999999876543221100 011334555664433 2345667999988777
Q ss_pred HHHHH
Q 004234 533 QFFLN 537 (766)
Q Consensus 533 ~~~l~ 537 (766)
.+++.
T Consensus 191 ~~l~~ 195 (283)
T cd07835 191 AEMVN 195 (283)
T ss_pred HHHHh
Confidence 66553
No 371
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.16 E-value=8.7e-11 Score=127.57 Aligned_cols=186 Identities=15% Similarity=0.138 Sum_probs=110.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.||||+..+.-... ... +
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------~~~------~ 49 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-----------------------------------FCQ------R 49 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccch-----------------------------------hHH------H
Confidence 6799999999999998 69999999875421111 000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
+..|...+.++. +..-+.+..++.. .....+++|||+++ .+.+.. ....++...+...+.+ ..+..+
T Consensus 50 ~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~~l~~~~~~~i~~ql~~aL~~L 122 (336)
T cd07849 50 TLREIKILRRFK----HENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLI--KTQHLSNDHIQYFLYQILRGLKYI 122 (336)
T ss_pred HHHHHHHHHhCC----CCCcCchhheeecccccccceEEEEehhccc-CHHHHH--hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 222333333322 1111222222211 12346899999987 454432 2223344443333322 347889
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCCHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVR 529 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~~~D~~~l~ 529 (766)
|..|++|+|+||.||+++. ++.++++|||++.......... .. ..-..++..+++++... ....+...|++++.
T Consensus 123 H~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~~~~~~--~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG 197 (336)
T cd07849 123 HSANVLHRDLKPSNLLLNT--NCDLKICDFGLARIADPEHDHT--GF-LTEYVATRWYRAPEIMLNSKGYTKAIDIWSVG 197 (336)
T ss_pred HhCCeeccCCCHHHEEECC--CCCEEECcccceeecccccccc--CC-cCCcCcCCCccChHHhhCCCCCCcHHHHHHHH
Confidence 9999999999999999985 8899999999988764422110 00 00012344466677543 33456678999998
Q ss_pred HHHHHHHH
Q 004234 530 RTAQFFLN 537 (766)
Q Consensus 530 ~~i~~~l~ 537 (766)
..+.+++.
T Consensus 198 vil~el~~ 205 (336)
T cd07849 198 CILAEMLS 205 (336)
T ss_pred HHHHHHHh
Confidence 77766553
No 372
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.15 E-value=3.4e-10 Score=122.51 Aligned_cols=187 Identities=14% Similarity=0.103 Sum_probs=110.6
Q ss_pred ccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHH
Q 004234 303 AASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQE 380 (766)
Q Consensus 303 saSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~E 380 (766)
.|++++||+|.. +|+.||||+....-... +..+ .+.+|
T Consensus 10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~----------------------------------~~~~------~~~~e 49 (328)
T cd08226 10 FCNLTSVYLARHTPTGTLVTVRITDLENCTE----------------------------------EHLK------ALQNE 49 (328)
T ss_pred ccCceeEEEEEEcCCCcEEEEEEeccccCCH----------------------------------HHHH------HHHHH
Confidence 349999999998 69999999874321100 0001 22233
Q ss_pred HHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhCCcc
Q 004234 381 AANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSHGFF 456 (766)
Q Consensus 381 A~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~Gff 456 (766)
+.-+. .+. +++| .+..++ ......+++|||++|+++.++.... ..+.+...+...+.+ ..+..+|..|++
T Consensus 50 ~~~~~----~l~-h~niv~~~~~~-~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 50 VVLSH----FFR-HPNIMTSWTVF-TTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred HHHHH----hCC-CCCcceEeeeE-ecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 32222 232 3333 333333 3345679999999999998865321 223444443333322 336788999999
Q ss_pred ccCCCCCcEEEeecCCCcEEEEeecceeccChhhH-HHHHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCCHHHHHHHHH
Q 004234 457 HADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR-EGLLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 457 HaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r-~~l~~l~~a~~~~D~~~v~~~l~~lG--~~~~~~D~~~l~~~i~ 533 (766)
|+|++|.||++.. ++.+++.|||.+........ ................++.+++...+ -.++..|++++...+.
T Consensus 124 HrDlkp~Nill~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~ 201 (328)
T cd08226 124 HRNIKASHILISG--DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITAC 201 (328)
T ss_pred cCCCCHHHEEEeC--CCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHH
Confidence 9999999999985 88999999986544322110 00000000001122346777776543 2456789999988777
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 202 el~~ 205 (328)
T cd08226 202 ELAT 205 (328)
T ss_pred HHHh
Confidence 6653
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.15 E-value=2.1e-10 Score=118.28 Aligned_cols=118 Identities=17% Similarity=0.163 Sum_probs=82.0
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceec
Q 004234 408 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 485 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~ 485 (766)
...+++|||++|++|.+.... ...++...+...+.+ ..+..+|..|++|+|+||.||+++. ++.++++|||....
T Consensus 58 ~~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~ 134 (237)
T cd05576 58 DSVFLVLQHAEGGKLWSHISK-FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSE 134 (237)
T ss_pred CeEEEEEecCCCCCHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhc
Confidence 457999999999999886432 223444444443332 3367889999999999999999986 88999999998776
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 486 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 486 L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
+...... ......+++++....+..++..|++++...+.+++.
T Consensus 135 ~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 135 VEDSCDG---------EAVENMYCAPEVGGISEETEACDWWSLGAILFELLT 177 (237)
T ss_pred ccccccc---------CCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHH
Confidence 6542211 112233566666655555677899999877766553
No 374
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.13 E-value=1e-09 Score=115.18 Aligned_cols=149 Identities=16% Similarity=0.159 Sum_probs=97.1
Q ss_pred cccc-ccceeEEEEEeecCeeEEEEEec-CCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIA-AASLGQVHRARLKGEEVVVKVQR-PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIg-saSiGQVhrA~l~G~~VAVKVqr-P~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+| .|+.|.||.....|..+|||.-+ +++-.. ++... +.......-.
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~k-------------v~~~~-----------------~~~~~~~~~r 86 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGK-------------LSKDR-----------------YLFTGLERTR 86 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHh-------------hhhhc-----------------ccccchhhhH
Confidence 4676 89999999999988999999763 332111 11000 0000012234
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc---C---CCeEEEEeecCC-CChhhhhhhhhcCCCHHHHHHHHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY---T---TPQILTMEYVPG-IKINRIQSLDELGVDRKRLGRYAVESYLEQ 449 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~---s---t~~vLVMEyieG-~~L~d~~~l~~~g~d~~~la~~lv~~~l~q 449 (766)
+.+|.+.+.++.+ +++.+|.++... . ...+|+|||++| .+|.++.. ....+.. .... +...+..
T Consensus 87 ~~rE~~ll~~L~~-----~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~--~~~l~~~-~~~~-i~~~l~~ 157 (239)
T PRK01723 87 AFAEFRLLAQLYE-----AGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ--EAPLSEE-QWQA-IGQLIAR 157 (239)
T ss_pred HHHHHHHHHHHHh-----CCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh--cCCCCHH-HHHH-HHHHHHH
Confidence 5667777777754 346667665421 1 123699999998 67877642 2222332 2233 3456889
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
+|..|++|+|+||+|||+++ +++++|+|||.+..-.+
T Consensus 158 lH~~GI~HrDlkp~NILv~~--~~~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 158 FHDAGVYHADLNAHNILLDP--DGKFWLIDFDRGELRTP 194 (239)
T ss_pred HHHCCCCCCCCCchhEEEcC--CCCEEEEECCCcccCCC
Confidence 99999999999999999985 67999999998887653
No 375
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.13 E-value=5.7e-10 Score=119.32 Aligned_cols=128 Identities=13% Similarity=0.114 Sum_probs=84.4
Q ss_pred CCCeEEEEeecCCCChhhhhhhh-hcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecce
Q 004234 407 TTPQILTMEYVPGIKINRIQSLD-ELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 483 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~-~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv 483 (766)
....+++|||++|+++.++.... ..+.+...+...+.+ ..+..+|..|++|+|++|+||+++. ++.+++.|||.+
T Consensus 71 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~ 148 (314)
T cd08216 71 DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYS 148 (314)
T ss_pred CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccc
Confidence 45679999999999998865422 223444444433322 3367889999999999999999986 789999999988
Q ss_pred eccChhhHHH-HHHHHHHHhhcCHHHHHHHHHHcC--CCCCCCCHHHHHHHHHHHH
Q 004234 484 GSISPNIREG-LLEAFYGIYEKDADKVLQAMVQMG--VLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 484 ~~L~~~~r~~-l~~l~~a~~~~D~~~v~~~l~~lG--~~~~~~D~~~l~~~i~~~l 536 (766)
..+....... ...........+..++++++.... ..++..|++++...+.+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~ 204 (314)
T cd08216 149 VSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELA 204 (314)
T ss_pred eeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHH
Confidence 7664322110 000001112344557778776543 2456789999987766654
No 376
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.13 E-value=1.4e-10 Score=125.16 Aligned_cols=185 Identities=18% Similarity=0.183 Sum_probs=110.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|+. +|+.|+||+..+..... ...+ .
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------------------------------~~~~------~ 45 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL----------------------------------IDAK------R 45 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc----------------------------------hhhh------h
Confidence 5799999999999998 48999999875432110 0001 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec----cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE----YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e----~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI 450 (766)
+..|...+..+. +..-+.+..++.. -.+..+++|||+++ .|.++.... ..++...+...+. -..+..+
T Consensus 46 ~~~e~~~l~~l~----~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~L 119 (330)
T cd07834 46 ILREIKLLRHLR----HENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSP-QPLTDDHIQYFLYQILRGLKYL 119 (330)
T ss_pred HHHHHHHHHhcC----CcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 222333232221 1111111111111 11356899999986 566543211 1334443333322 2336788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHH--HHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIRE--GLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTA 527 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~--~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~ 527 (766)
|..|++|+|+||+||+++. ++.++|+|||++......... .... ...+..+++++..... ......|+++
T Consensus 120 H~~gi~H~dlkp~nili~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~-----~~~~~~y~aPE~~~~~~~~~~~sDi~s 192 (330)
T cd07834 120 HSANVIHRDLKPSNILVNS--NCDLKICDFGLARGVDPDEDEKGFLTE-----YVVTRWYRAPELLLSSSRYTKAIDIWS 192 (330)
T ss_pred HhCCeecCCCCHHHEEEcC--CCCEEEcccCceEeecccccccccccc-----cccccCcCCceeeecccCCCcchhHHH
Confidence 9999999999999999986 799999999999987664321 0100 1123345566665544 5566789999
Q ss_pred HHHHHHHHH
Q 004234 528 VRRTAQFFL 536 (766)
Q Consensus 528 l~~~i~~~l 536 (766)
+...+.+++
T Consensus 193 lG~il~~l~ 201 (330)
T cd07834 193 VGCIFAELL 201 (330)
T ss_pred HHHHHHHHH
Confidence 887666554
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.13 E-value=3.2e-10 Score=132.90 Aligned_cols=162 Identities=15% Similarity=0.195 Sum_probs=111.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|.+|+||+++. +|+.+||||+.|+.....+..++
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~e--------------------------------------- 65 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELE--------------------------------------- 65 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHH---------------------------------------
Confidence 4688999999999887 69999999998876554222111
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LE 448 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--l~ 448 (766)
-|+-++. .+++++..-.-+. .-.++.|||||||.|+++.|+... .....+...++..+.+.+ +.
T Consensus 66 -----ynil~~~---~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~ 137 (953)
T KOG0587|consen 66 -----YNMLKKY---SHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLA 137 (953)
T ss_pred -----HHHHHhc---cCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHH
Confidence 1333332 2333332211111 234678999999999999997642 233345566777766655 56
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~ 515 (766)
++|...++|+|++-.|||++. +|.++|+|||...+++....+. ...-+.+-.|+++.+.
T Consensus 138 HLH~nkviHRDikG~NiLLT~--e~~VKLvDFGvSaQldsT~grR------nT~iGtP~WMAPEVia 196 (953)
T KOG0587|consen 138 HLHNNKVIHRDIKGQNVLLTE--NAEVKLVDFGVSAQLDSTVGRR------NTFIGTPYWMAPEVIA 196 (953)
T ss_pred HHhhcceeeecccCceEEEec--cCcEEEeeeeeeeeeecccccc------cCcCCCcccccceeee
Confidence 677888999999999999996 8999999999999998765432 2234567777776654
No 378
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.12 E-value=3.5e-10 Score=117.29 Aligned_cols=121 Identities=10% Similarity=0.066 Sum_probs=81.4
Q ss_pred CCCeEEEEeecCCCChhhhhhh---hhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeec
Q 004234 407 TTPQILTMEYVPGIKINRIQSL---DELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFG 481 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l---~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFG 481 (766)
.+..+++|||++|.+|.++... ....++...+...+.+ ..+..+|..|++|+|++|.||+++ ++.++++|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~---~~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK---NNLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee---cCCEeecccC
Confidence 3557899999999999876432 1122344333333322 336788999999999999999996 4679999999
Q ss_pred ceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 482 MMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 482 lv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
.+..+...... .....+...+++++...........|.+++...+..++
T Consensus 151 ~~~~~~~~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~ 199 (260)
T cd08222 151 VSRLLMGSCDL------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC 199 (260)
T ss_pred ceeecCCCccc------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 88766432211 11123455677777766555566789999887665544
No 379
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.12 E-value=7.1e-11 Score=135.02 Aligned_cols=186 Identities=17% Similarity=0.169 Sum_probs=128.1
Q ss_pred ccccccceeEEEEEeec---Ce--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK---GE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQ 373 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~---G~--~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ 373 (766)
+-||+||||.||+|.|+ |+ .||||+.+++....+
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~----------------------------------------- 154 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAI----------------------------------------- 154 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchh-----------------------------------------
Confidence 45899999999999993 54 789999987754320
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHHHHHHHHHHH--HHHH
Q 004234 374 EIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKRLGRYAVESY--LEQI 450 (766)
Q Consensus 374 ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~la~~lv~~~--l~qI 450 (766)
--||++|+..|-++.+ ..-|+.--|+ +.....||||.+++++|-+.... .+..+-...+...+.+.. +..+
T Consensus 155 mddflrEas~M~~L~H----~hliRLyGvV--l~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL 228 (1039)
T KOG0199|consen 155 MDDFLREASHMLKLQH----PHLIRLYGVV--LDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL 228 (1039)
T ss_pred HHHHHHHHHHHHhccC----cceeEEeeee--ccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH
Confidence 1278999998887643 1223332333 34667899999999999885432 122223334444433332 4445
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
-..+++|||+-..|+++-. ...++|+|||+++.|...+... .+..-..=-+..++++-++.+-.+-..|++.+..
T Consensus 229 eskrlvHRDLAARNlllas--prtVKI~DFGLmRaLg~ned~Y---vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGV 303 (1039)
T KOG0199|consen 229 ESKRLVHRDLAARNLLLAS--PRTVKICDFGLMRALGENEDMY---VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGV 303 (1039)
T ss_pred hhhhhhhhhhhhhhheecc--cceeeeecccceeccCCCCcce---EecCCCcCcccccCHhHhccccccccchhhhhhh
Confidence 5799999999999999975 6689999999999998754332 1111112235678899999988888999999988
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+-+++
T Consensus 304 TiWEMF 309 (1039)
T KOG0199|consen 304 TIWEMF 309 (1039)
T ss_pred hHHhhh
Confidence 775554
No 380
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.11 E-value=3.2e-10 Score=123.20 Aligned_cols=181 Identities=16% Similarity=0.209 Sum_probs=112.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||.|++|.||+|.. +|+.||||......... .. .-+
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----------------------------------~~------~~~ 55 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP----------------------------------VL------AKR 55 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEeccccccc----------------------------------ch------hHH
Confidence 7899999999999997 69999999763321100 00 012
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~G 454 (766)
+..|...+..+ .+..-+.+...+..-....+++|||+.+ ++.++.. ....+...+...+ +...+..+|..|
T Consensus 56 ~~~E~~~l~~l----~hpniv~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 56 TYRELKLLKHL----RHENIISLSDIFISPLEDIYFVTELLGT-DLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred HHHHHHHHHhc----CCCCeeeEeeeEecCCCcEEEEeehhcc-CHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 23344434333 2222344444443334567999999854 6766532 2223332222222 223467889999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.||+++. ++.++++|||++...+..... ..++..+++++.... ...++..|++++...+.
T Consensus 129 iiH~dl~p~Nili~~--~~~~~l~dfg~~~~~~~~~~~---------~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 197 (328)
T cd07856 129 VVHRDLKPSNILINE--NCDLKICDFGLARIQDPQMTG---------YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFA 197 (328)
T ss_pred cccCCCCHHHEeECC--CCCEEeCccccccccCCCcCC---------CcccccccCceeeeccCCcCcHHHHHHHHHHHH
Confidence 999999999999985 889999999998876543211 122444566665433 23456679999887776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 198 el~t 201 (328)
T cd07856 198 EMLE 201 (328)
T ss_pred HHHh
Confidence 6653
No 381
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.11 E-value=2.6e-11 Score=146.36 Aligned_cols=184 Identities=18% Similarity=0.119 Sum_probs=116.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEec--CCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQR--PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqr--P~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
.-||.|-||+||.|.. +|+-.|||-.+ |+.. +. +..+. +
T Consensus 1241 ~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~------------------k~----------~~~i~--------e- 1283 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDH------------------KT----------FKLIA--------E- 1283 (1509)
T ss_pred cccCCcceeeeEEeecCCccchhhhhhhhcCcccc------------------cc----------CcchH--------H-
Confidence 4799999999999998 69999998542 1110 00 11111 1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcC-CCHHHHHHHHHHHHHHHHHhC
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG-VDRKRLGRYAVESYLEQILSH 453 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g-~d~~~la~~lv~~~l~qI~~~ 453 (766)
|...++.+ .+|++.-+..+.-+-.+.+|-||||+|++|.++..+.... .-..++....+-..+..+|++
T Consensus 1284 -----Em~vlE~l-----nHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~ 1353 (1509)
T KOG4645|consen 1284 -----EMKVLEGL-----NHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH 1353 (1509)
T ss_pred -----HHHHHHhc-----cCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc
Confidence 22233333 2344444444444455678999999999999976543211 011122222233446778999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCCHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVRR 530 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~---~~~~~D~~~l~~ 530 (766)
|++|+||||.||+++. +|-|++.|||.+..+.......- .-+.+ ..+++-||+++.+--.- .....|++++.-
T Consensus 1354 gIVHRDIK~aNI~Ld~--~g~iK~~DFGsa~ki~~~~~~~~-~el~~-~~GT~~YMAPEvit~t~~kG~~~A~DiWslGC 1429 (1509)
T KOG4645|consen 1354 GIVHRDIKPANILLDF--NGLIKYGDFGSAVKIKNNAQTMP-GELQS-MMGTPMYMAPEVITGTKGKGHGGAADIWSLGC 1429 (1509)
T ss_pred CceecCCCccceeeec--CCcEEeecccceeEecCchhcCC-HHHHh-hcCCchhcCchhhcccccCCCCcchhhhcccc
Confidence 9999999999999986 88999999999999877632211 11122 35789999999874221 122357777775
Q ss_pred HHH
Q 004234 531 TAQ 533 (766)
Q Consensus 531 ~i~ 533 (766)
.+-
T Consensus 1430 VVl 1432 (1509)
T KOG4645|consen 1430 VVL 1432 (1509)
T ss_pred eEE
Confidence 543
No 382
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.10 E-value=3.9e-10 Score=122.63 Aligned_cols=184 Identities=16% Similarity=0.167 Sum_probs=110.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++||.|++|.||+|+. +|+.||||..++....... ...
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~----------------------------------------~~~ 50 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRID----------------------------------------AKR 50 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccch----------------------------------------hHH
Confidence 6899999999999998 5999999987543211100 001
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee----ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW----EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQI 450 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~----e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI 450 (766)
+..|...+..+. +..-+.+..++. +.....+|+|||++| .|.++... ...++...+...+.+ ..+..+
T Consensus 51 ~~~E~~~l~~l~----h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~L 124 (337)
T cd07858 51 TLREIKLLRHLD----HENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYI 124 (337)
T ss_pred HHHHHHHHHhcC----CCCccchHHheecccccccCcEEEEEeCCCC-CHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 122333232221 111111111111 111347999999975 56654321 122344443333322 236788
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 529 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~ 529 (766)
|..|++|+|++|.||+++. ++.++|+|||++........ .. ........+++++.... +..+...|++++.
T Consensus 125 H~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~~~~~~~--~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG 196 (337)
T cd07858 125 HSANVLHRDLKPSNLLLNA--NCDLKICDFGLARTTSEKGD--FM----TEYVVTRWYRAPELLLNCSEYTTAIDVWSVG 196 (337)
T ss_pred HhCCEecCCCCHHHEEEcC--CCCEEECcCccccccCCCcc--cc----cccccccCccChHHHhcCCCCCCcccHHHHH
Confidence 9999999999999999985 88999999999887654321 10 01122445666776543 3466778999998
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
..+.+++
T Consensus 197 ~il~~l~ 203 (337)
T cd07858 197 CIFAELL 203 (337)
T ss_pred HHHHHHH
Confidence 7766654
No 383
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.10 E-value=4.2e-10 Score=122.13 Aligned_cols=189 Identities=16% Similarity=0.110 Sum_probs=111.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|.+ +|+.||||......... .. ...
T Consensus 13 ~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------------------------~~-----------~~~ 52 (337)
T cd07852 13 QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-----------------------------TD-----------AQR 52 (337)
T ss_pred HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-----------------------------hh-----------hhh
Confidence 5799999999999998 58999999763211100 00 012
Q ss_pred HHHHHHHHHHHHHhcCCCCc-cccceeeecc-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDY-VKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~ 452 (766)
+..|...+.++ .++++ +.+..++... ....++||||++| .|.+..... ..+.......+ +...+..+|.
T Consensus 53 ~~~E~~~l~~l----~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~ 125 (337)
T cd07852 53 TFREIMFLQEL----GDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHS 125 (337)
T ss_pred hhHHHHHHHHh----cCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 23344444433 12222 2333332221 2246999999986 666643221 23333222222 2234678899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~-~lG~~~~~~D~~~l~~~ 531 (766)
.|++|+|++|.||+++. ++.++++|||++..+.......-.... .-..+...+++++.. ..+..+...|++++...
T Consensus 126 ~~i~H~dl~p~nill~~--~~~~kl~d~g~~~~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~ 202 (337)
T cd07852 126 GNVIHRDLKPSNILLNS--DCRVKLADFGLARSLSELEENPENPVL-TDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI 202 (337)
T ss_pred CCeecCCCCHHHEEEcC--CCcEEEeeccchhccccccccccCcch-hcccccccccCceeeeccccccccchHHHHHHH
Confidence 99999999999999986 899999999999876543221000000 001234456666644 23445667899999887
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
+.+++.
T Consensus 203 l~el~t 208 (337)
T cd07852 203 LGEMLL 208 (337)
T ss_pred HHHHHh
Confidence 776654
No 384
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.09 E-value=4.1e-10 Score=122.20 Aligned_cols=188 Identities=18% Similarity=0.149 Sum_probs=111.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|+||+|+. +|+.||+|+........ +... .
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~----------------------------------~~~~------~ 50 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVP----------------------------------TLAK------R 50 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccc----------------------------------cchH------H
Confidence 5799999999999998 59999999874321110 0000 1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeec---cCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHH--HHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWE---YTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAV--ESYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e---~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv--~~~l~qI~ 451 (766)
+.+|...+.++. +..-+.+..++.. .....+++|||+.| .+.+..... ..++...+...+. -..+..+|
T Consensus 51 ~~~e~~~l~~l~----h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH 124 (334)
T cd07855 51 TLRELKILRHFK----HDNIIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIH 124 (334)
T ss_pred HHHHHHHHHhcC----CCCccCHHHhccccCCCCceEEEEEehhhh-hHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 122333333332 1111222222221 22356899999976 666654221 2234433333332 23467889
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~ 530 (766)
..|++|+|++|.||+++. ++.++|+|||++..+........ .. ..-..+...+++++.... +......|++++..
T Consensus 125 ~~~ivH~dlkp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~-~~-~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~ 200 (334)
T cd07855 125 SANVIHRDLKPSNLLVNE--DCELRIGDFGMARGLSSSPTEHK-YF-MTEYVATRWYRAPELLLSLPEYTTAIDMWSVGC 200 (334)
T ss_pred HCCeecCCCCHHHEEEcC--CCcEEecccccceeecccCcCCC-cc-cccccccccccChHHhcCCcccccccchHHHHH
Confidence 999999999999999986 89999999999877643221100 00 000123344566665533 44567789999987
Q ss_pred HHHHHH
Q 004234 531 TAQFFL 536 (766)
Q Consensus 531 ~i~~~l 536 (766)
.+.+++
T Consensus 201 ~l~el~ 206 (334)
T cd07855 201 IFAEML 206 (334)
T ss_pred HHHHHH
Confidence 766654
No 385
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.09 E-value=6.6e-10 Score=118.43 Aligned_cols=193 Identities=15% Similarity=0.107 Sum_probs=109.9
Q ss_pred ccccccceeEEEEEee----cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL----KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l----~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
..||+|++|.||+|.. +|+.||||+..+..... +.+...
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~---------------------------------~~~~~~---- 48 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQY---------------------------------TGISQS---- 48 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccc---------------------------------cCccHH----
Confidence 4699999999999998 37899999986543100 000011
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeecc-CCCeEEEEeecCCCChhhhhhhhh---cCCCHHHHHHHH--HHHHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TTPQILTMEYVPGIKINRIQSLDE---LGVDRKRLGRYA--VESYLE 448 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st~~vLVMEyieG~~L~d~~~l~~---~g~d~~~la~~l--v~~~l~ 448 (766)
+.+|+.-+..+ .+..-+.+...+..- ....++||||+++..+..+..... ..+....+...+ +-..+.
T Consensus 49 --~~~e~~~l~~l----~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 122 (316)
T cd07842 49 --ACREIALLREL----KHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH 122 (316)
T ss_pred --HHHHHHHHHhc----CCCCccceEEEEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence 12233323332 222223333333221 145799999998743332221111 123333333322 223467
Q ss_pred HHHhCCccccCCCCCcEEEee--cCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCH
Q 004234 449 QILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDT 525 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~--~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~ 525 (766)
.+|..|++|+|++|.||+++. ..++.++++|||++..+......... ..-......+++++....+ ......|+
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLAD---LDPVVVTIWYRAPELLLGARHYTKAIDI 199 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccc---cCCccccccccCHHHHhCCCCCCcHHHH
Confidence 889999999999999999973 11578999999998876543221000 0000123345667765432 34566799
Q ss_pred HHHHHHHHHHHH
Q 004234 526 TAVRRTAQFFLN 537 (766)
Q Consensus 526 ~~l~~~i~~~l~ 537 (766)
+++...+.+++.
T Consensus 200 ~slG~~l~~l~~ 211 (316)
T cd07842 200 WAIGCIFAELLT 211 (316)
T ss_pred HHHHHHHHHHHh
Confidence 999877766553
No 386
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.08 E-value=4.2e-10 Score=121.92 Aligned_cols=201 Identities=11% Similarity=0.034 Sum_probs=111.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||+|++|.||+|+. +|+.||||+.+.......... ....+.+ ...+.+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~------------------------~~~~~~~----~~~~~~ 66 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTK------------------------DRQLVGM----CGIHFT 66 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeecccccccccc------------------------chhhhcc----cccchh
Confidence 5699999999999998 599999998753221110000 0000000 001123
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~ 453 (766)
+.+|...+..+. + +++ .+...+ ......+++|||++| .+.+.... ...++...+...+.+ ..+..+|..
T Consensus 67 ~~~E~~~l~~l~----h-~~iv~~~~~~-~~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~ 138 (335)
T PTZ00024 67 TLRELKIMNEIK----H-ENIMGLVDVY-VEGDFINLVMDIMAS-DLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKW 138 (335)
T ss_pred HHHHHHHHHhCC----C-cceeeeeEEE-ecCCcEEEEEecccc-CHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 344554444442 2 222 222222 234567999999986 56654321 122344433333322 237788999
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH--------HHHHHHHhhcCHHHHHHHHHHcC-CCCCCCC
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL--------LEAFYGIYEKDADKVLQAMVQMG-VLVPTGD 524 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l--------~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D 524 (766)
|++|+|++|+||+++. ++.++++|||++..+....-... .............+++++....+ ..+...|
T Consensus 139 ~i~H~dl~~~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 216 (335)
T PTZ00024 139 YFMHRDLSPANIFINS--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVD 216 (335)
T ss_pred CeecccccHHHeEECC--CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHH
Confidence 9999999999999986 78999999999987651100000 00000000112334555554322 2355678
Q ss_pred HHHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFLN 537 (766)
Q Consensus 525 ~~~l~~~i~~~l~ 537 (766)
++++...+.+++.
T Consensus 217 v~slG~~l~el~t 229 (335)
T PTZ00024 217 MWSVGCIFAELLT 229 (335)
T ss_pred HHHHHHHHHHHHh
Confidence 8888877666553
No 387
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.07 E-value=6.8e-10 Score=121.14 Aligned_cols=121 Identities=14% Similarity=0.113 Sum_probs=74.9
Q ss_pred CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 409 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 409 ~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
..+++|||+++ .+.+... ...+....+...+ +-..+..+|..|++|+|+||+||+++. .++.++++|||++..+
T Consensus 90 ~~~lv~e~~~~-~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-~~~~~kl~dfg~~~~~ 165 (342)
T cd07854 90 SVYIVQEYMET-DLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-EDLVLKIGDFGLARIV 165 (342)
T ss_pred eEEEEeecccc-cHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-CCceEEECCcccceec
Confidence 36899999986 6655432 2223333333222 223467789999999999999999974 3567999999999876
Q ss_pred ChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHHHHHHHH
Q 004234 487 SPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 487 ~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~~i~~~l 536 (766)
.......- ......+...+++++...- ......+|++++...+.+++
T Consensus 166 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~ 213 (342)
T cd07854 166 DPHYSHKG---YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 213 (342)
T ss_pred CCcccccc---ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHH
Confidence 54322100 0000112334566665432 23455689999987776654
No 388
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1.2e-10 Score=121.29 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=65.4
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 524 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D 524 (766)
..++.+|..|+.|+|+||||++|+. +-.++++|||+++.-+.+++.++..-++.-..+-+ +.+....-.+...|
T Consensus 167 RGLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAP----EiLMGaRhYs~AvD 240 (449)
T KOG0664|consen 167 RGLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAP----ELLMGARRYTGAVD 240 (449)
T ss_pred hhhHHHhhcchhhccCCCccEEecc--CceEEecccccccccchhhhhhhHHHHHHHHhccH----HHhhcchhhcCccc
Confidence 3478889999999999999999985 77899999999999999888888766555333333 33333333456679
Q ss_pred HHHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFLN 537 (766)
Q Consensus 525 ~~~l~~~i~~~l~ 537 (766)
++++.-...+++.
T Consensus 241 iWSVGCIFaELLg 253 (449)
T KOG0664|consen 241 IWSVGCIFAELLQ 253 (449)
T ss_pred eehhhHHHHHHHh
Confidence 9998876666554
No 389
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=5.8e-10 Score=118.49 Aligned_cols=191 Identities=17% Similarity=0.162 Sum_probs=126.1
Q ss_pred hccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004234 294 ERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (766)
Q Consensus 294 ~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 370 (766)
++||- +.+|.|.||.|-.++- +|+.+|+||.+..+--. -+|++.+
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviia--------------------------------kdEVAHT 215 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIA--------------------------------KDEVAHT 215 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheee--------------------------------hHHhhhh
Confidence 34554 6899999999999988 69999999986543111 0222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhh-hhhhcCCCHHHHHHHHHHHHHHH
Q 004234 371 LYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQ-SLDELGVDRKRLGRYAVESYLEQ 449 (766)
Q Consensus 371 l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~-~l~~~g~d~~~la~~lv~~~l~q 449 (766)
+ .|.+-+...++ |.+..-+.--+-..+.+.||||..|+.|--.. .-+....++.+.-..-+-..+..
T Consensus 216 l-------TE~RVL~~~~H-----PFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~Y 283 (516)
T KOG0690|consen 216 L-------TENRVLQNCRH-----PFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGY 283 (516)
T ss_pred h-------hHHHHHHhccC-----cHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhh
Confidence 1 22232222211 11111111112234679999999999876422 22223345555555555567899
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~-L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
+|..+++.+|+|-.|++++. ||+|++.|||+++. ++.... .....+.+++++++.++-.-.....|-+.+
T Consensus 284 LHs~~ivYRDlKLENLlLDk--DGHIKitDFGLCKE~I~~g~t-------~kTFCGTPEYLAPEVleDnDYgraVDWWG~ 354 (516)
T KOG0690|consen 284 LHSRNIVYRDLKLENLLLDK--DGHIKITDFGLCKEEIKYGDT-------TKTFCGTPEYLAPEVLEDNDYGRAVDWWGV 354 (516)
T ss_pred hhhCCeeeeechhhhheecc--CCceEeeecccchhcccccce-------eccccCChhhcCchhhccccccceeehhhh
Confidence 99999999999999999986 99999999999975 222111 123467999999999986666677788888
Q ss_pred HHHHHHHHH
Q 004234 529 RRTAQFFLN 537 (766)
Q Consensus 529 ~~~i~~~l~ 537 (766)
...+++++.
T Consensus 355 GVVMYEMmC 363 (516)
T KOG0690|consen 355 GVVMYEMMC 363 (516)
T ss_pred hHHHHHHHh
Confidence 887777653
No 390
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.05 E-value=1.5e-09 Score=118.32 Aligned_cols=186 Identities=19% Similarity=0.201 Sum_probs=113.7
Q ss_pred cccccccceeEEEEEee-c--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL-K--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l-~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
...||+|+||+||.+.. . ...+|+|+........ .. .+..|
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~----------------------------~~--------~l~~E 66 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK----------------------------PS--------VLKIE 66 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC----------------------------Cc--------cchhH
Confidence 36899999999999998 3 3589999874321110 00 11112
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeecc-CC--CeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHHHHHH--HH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TT--PQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYAVESY--LE 448 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st--~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~lv~~~--l~ 448 (766)
.+. +..+.. ....-.+|.+++.. .+ -+++||+.+ |.+|.++..... ..++....+..+++.. ++
T Consensus 67 ~~v------l~~l~~---~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~ 136 (322)
T KOG1164|consen 67 IQV------LKKLEK---KNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALE 136 (322)
T ss_pred HHH------HHHHhh---hcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHH
Confidence 222 222221 11234677777655 22 469999976 888998764332 4466666666666554 89
Q ss_pred HHHhCCccccCCCCCcEEEeecC---CCcEEEEeeccee--ccChhhHHHHHH--HHHHHhhcCHHHHHHHHHHcCCCCC
Q 004234 449 QILSHGFFHADPHPGNIAVDDVN---GGRLIFYDFGMMG--SISPNIREGLLE--AFYGIYEKDADKVLQAMVQMGVLVP 521 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~---~g~l~LiDFGlv~--~L~~~~r~~l~~--l~~a~~~~D~~~v~~~l~~lG~~~~ 521 (766)
.+|+.||+|||+||+|+++.... ...+.++|||+++ .+.......... -..+...++..++....-......+
T Consensus 137 ~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r 216 (322)
T KOG1164|consen 137 DLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGR 216 (322)
T ss_pred HHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCC
Confidence 99999999999999999997521 1469999999999 432222111000 0012334666777666555555556
Q ss_pred CCCHHHHH
Q 004234 522 TGDTTAVR 529 (766)
Q Consensus 522 ~~D~~~l~ 529 (766)
..|..++-
T Consensus 217 ~DDles~~ 224 (322)
T KOG1164|consen 217 RDDLESLF 224 (322)
T ss_pred chhhhhHH
Confidence 66766643
No 391
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.05 E-value=5.1e-10 Score=127.32 Aligned_cols=182 Identities=18% Similarity=0.196 Sum_probs=122.5
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..||+|.||.|..|+. +|.+||||+....-- |.... ..+.+|
T Consensus 62 ~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-----------------------------n~~~~-----~k~~re-- 105 (596)
T KOG0586|consen 62 KTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-----------------------------NPSKR-----QKLGRE-- 105 (596)
T ss_pred eeeccceeEEEEeeEecCCCceEEEEEehhccc-----------------------------ChHHH-----HHHHHH--
Confidence 5699999999999998 799999998722111 11110 112222
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~---~~l~qI~~ 452 (766)
.+-|..+ ++|++ .+-.|+ +.....+|||||+-|+.+.++. ...+-+....++.... ..++.+|.
T Consensus 106 ----v~imk~l-----~HPnIvkl~~v~-~t~~~lylV~eya~~ge~~~yl--~~~gr~~e~~ar~~F~q~vsaveYcH~ 173 (596)
T KOG0586|consen 106 ----VDIMKSL-----NHPNIVKLFSVI-ETEATLYLVMEYASGGELFDYL--VKHGRMKEKEARAKFRQIVSAVEYCHS 173 (596)
T ss_pred ----HHHHHhc-----CCcceeeeeeee-eecceeEEEEEeccCchhHHHH--HhcccchhhhhhhhhHHHHHHHHHHhh
Confidence 3333322 22333 333333 2345679999999999998864 3344444444444433 34788899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHH-cCCCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQ-MGVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~-lG~~~~~~D~~~l~~~ 531 (766)
++|+|+|+|..||+++. +..++|.|||+...++... +.+ ...+.+.++++++.. .....|..|.+.+...
T Consensus 174 k~ivHrdLk~eNilL~~--~mnikIaDfgfS~~~~~~~---~lq----t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvv 244 (596)
T KOG0586|consen 174 KNIVHRDLKAENILLDE--NMNIKIADFGFSTFFDYGL---MLQ----TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVV 244 (596)
T ss_pred cceeccccchhhccccc--ccceeeeccccceeecccc---ccc----ccCCCCCccChHhhcCcccCCcceehhhhhhh
Confidence 99999999999999985 6779999999999987532 222 345678888888775 4566788899998877
Q ss_pred HHHHHH
Q 004234 532 AQFFLN 537 (766)
Q Consensus 532 i~~~l~ 537 (766)
++.++.
T Consensus 245 ly~LV~ 250 (596)
T KOG0586|consen 245 LYALVE 250 (596)
T ss_pred heeeee
Confidence 665543
No 392
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.05 E-value=1.6e-10 Score=139.11 Aligned_cols=129 Identities=19% Similarity=0.169 Sum_probs=85.1
Q ss_pred eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH---HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 410 QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE---SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 410 ~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~---~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
.|+-||||+-..+.++..-....-++ ..+..+++ ..+.+||..|++|||+||.||+++. ++.|+|.|||++..+
T Consensus 671 LYIQMEyCE~~ll~~iI~~N~~~~~~-d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~ 747 (1351)
T KOG1035|consen 671 LYIQMEYCEKTLLRDIIRRNHFNSQR-DEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDL 747 (1351)
T ss_pred EEEEHhhhhhhHHHHHHHhcccchhh-HHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhh
Confidence 48999999999888876433322122 22333333 2377899999999999999999985 889999999999874
Q ss_pred ChhhHHHHHHH-HHHH-----------hhcCHHHHHHHHHHcC---CCCCCCCHHHHHHHHHHHHHHHHH
Q 004234 487 SPNIREGLLEA-FYGI-----------YEKDADKVLQAMVQMG---VLVPTGDTTAVRRTAQFFLNSFEE 541 (766)
Q Consensus 487 ~~~~r~~l~~l-~~a~-----------~~~D~~~v~~~l~~lG---~~~~~~D~~~l~~~i~~~l~~~~~ 541 (766)
-.......... +... .-|+.-|++|++..-- -...+.|++++.-.+-+++-+|..
T Consensus 748 ~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~T 817 (1351)
T KOG1035|consen 748 KENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGT 817 (1351)
T ss_pred hhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCc
Confidence 32111111000 0000 1244567888887643 356788999999877766666543
No 393
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.04 E-value=6.1e-10 Score=116.12 Aligned_cols=197 Identities=18% Similarity=0.237 Sum_probs=130.5
Q ss_pred hhhhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH
Q 004234 291 DVFERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC 367 (766)
Q Consensus 291 eiF~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~ 367 (766)
+.|...++ +-+|.|..+.|-|+.. .|.+.|+|++--..... ..+-..++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~----------------------------~~e~~~~~ 65 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTE----------------------------SGETPYEM 65 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEeccccc----------------------------CCccHHHH
Confidence 45666665 6789999999999988 58999999873222111 01114455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCH---HHHHHHHH
Q 004234 368 ASVLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDR---KRLGRYAV 443 (766)
Q Consensus 368 ~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~---~~la~~lv 443 (766)
.+...+|++..+. ..++|++ .+-.+| +-.+-.+||.|.++-+.|-|+.... -.++. ..+.+.++
T Consensus 66 ~EaT~~Ev~ILRq----------v~GHP~II~l~D~y-es~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlf 133 (411)
T KOG0599|consen 66 REATRQEISILRQ----------VMGHPYIIDLQDVY-ESDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLF 133 (411)
T ss_pred HHHHHHHHHHHHH----------hcCCCcEEEeeeec-cCcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHH
Confidence 5555666554332 2344543 344444 3345568999999999999875421 11222 23333333
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC----
Q 004234 444 ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL---- 519 (766)
Q Consensus 444 ~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~---- 519 (766)
+. ...+|..+++|+|+||.|||+++ +.++++.|||.+.++.+..+ +.+ +.+++.+++++.++-...
T Consensus 134 eg-VeylHa~~IVHRDLKpENILldd--n~~i~isDFGFa~~l~~Gek--Lre-----lCGTPgYLAPEtikC~m~e~~p 203 (411)
T KOG0599|consen 134 EG-VEYLHARNIVHRDLKPENILLDD--NMNIKISDFGFACQLEPGEK--LRE-----LCGTPGYLAPETIKCSMYENHP 203 (411)
T ss_pred HH-HHHHHHhhhhhcccChhheeecc--ccceEEeccceeeccCCchh--HHH-----hcCCCcccChhheeeecccCCC
Confidence 32 56688999999999999999986 78999999999999988765 222 357999999998864332
Q ss_pred --CCCCCHHHHHHHHHHHHH
Q 004234 520 --VPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 520 --~~~~D~~~l~~~i~~~l~ 537 (766)
+...|+++....++-++.
T Consensus 204 GYs~EVD~Wa~GVImyTLLa 223 (411)
T KOG0599|consen 204 GYSKEVDEWACGVIMYTLLA 223 (411)
T ss_pred CccchhhHHHHHHHHHHHHc
Confidence 234577887777666554
No 394
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.03 E-value=6.9e-10 Score=117.85 Aligned_cols=189 Identities=19% Similarity=0.205 Sum_probs=123.6
Q ss_pred cccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
.+-+|+|.+|.|-.++- +|.++||||.... |. ..+..+.+|+
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-----------------------~g-------------HsR~RvfREV 126 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-----------------------PG-------------HSRSRVFREV 126 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcC-----------------------Cc-------------hHHHHHHHHH
Confidence 35799999999999987 7999999987211 10 1123344444
Q ss_pred HHHHHH---HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH--HHHHHHHHHHHHH
Q 004234 376 DYTQEA---ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR--LGRYAVESYLEQI 450 (766)
Q Consensus 376 Df~~EA---~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~--la~~lv~~~l~qI 450 (766)
+..... .|+..+-+.|.+ .++.|||||-|.|++|-..+.. ..-++..+ ....-+...|..+
T Consensus 127 e~f~~Cqgh~nilqLiefFEd-------------d~~FYLVfEKm~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFl 192 (463)
T KOG0607|consen 127 ETFYQCQGHKNILQLIEFFED-------------DTRFYLVFEKMRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFL 192 (463)
T ss_pred HHHHHhcCCccHHHHHHHhcc-------------cceEEEEEecccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHH
Confidence 443333 366666666655 4678999999999998764321 11122221 2222345668899
Q ss_pred HhCCccccCCCCCcEEEeecCC-CcEEEEeecceecc------ChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-----CC
Q 004234 451 LSHGFFHADPHPGNIAVDDVNG-GRLIFYDFGMMGSI------SPNIREGLLEAFYGIYEKDADKVLQAMVQM-----GV 518 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~-g~l~LiDFGlv~~L------~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-----G~ 518 (766)
|..||-|+|+||.|||..+++. ..++|+||-+...+ ++-..-.+ ..--+..++|++++.+. -+
T Consensus 193 H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L-----~tPvGSAEfMAPEVVd~fv~qA~~ 267 (463)
T KOG0607|consen 193 HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPEL-----LTPVGSAEFMAPEVVDVFVDQATF 267 (463)
T ss_pred hhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccc-----cCcccchhhcchhHHhhhcccccc
Confidence 9999999999999999986221 25899999776543 11111111 11236778888887763 34
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Q 004234 519 LVPTGDTTAVRRTAQFFLNSFEE 541 (766)
Q Consensus 519 ~~~~~D~~~l~~~i~~~l~~~~~ 541 (766)
.....|.+++...++.++..|..
T Consensus 268 YDKrCDlwSLGvIlYImLsGYpP 290 (463)
T KOG0607|consen 268 YDKRCDLWSLGVILYIMLSGYPP 290 (463)
T ss_pred ccccccHHHHHHHHHHHHhCCCC
Confidence 45667999999999999988853
No 395
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=9.7e-10 Score=132.95 Aligned_cols=140 Identities=20% Similarity=0.228 Sum_probs=90.5
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+-+|.|++|+||+|+. +|+.||+||++|-..-. ..|...+. .+|.
T Consensus 704 ~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----fYI~~q~~-------------------------~RLk----- 749 (974)
T KOG1166|consen 704 KEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----FYICLQVM-------------------------ERLK----- 749 (974)
T ss_pred eeeccccceEEEEeecCCCcEEEEEeecCCCcee----eeehHHHH-------------------------Hhhc-----
Confidence 3599999999999999 79999999998865433 22222221 1111
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGF 455 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~Gf 455 (766)
.....-+..|... . -+.+..+||+||.+=++|-|+.. .....+..-++-..++ .+++++|.+||
T Consensus 750 ~~~~~~~~~~~~a----------~---~~~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~I 815 (974)
T KOG1166|consen 750 PQMLPSIMHISSA----------H---VFQNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGI 815 (974)
T ss_pred hhhhcchHHHHHH----------H---ccCCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcce
Confidence 0000001111111 1 13677899999999999998765 2222333333333333 34899999999
Q ss_pred cccCCCCCcEEEeecC-----CCcEEEEeecceecc
Q 004234 456 FHADPHPGNIAVDDVN-----GGRLIFYDFGMMGSI 486 (766)
Q Consensus 456 fHaDpHPGNILV~~~~-----~g~l~LiDFGlv~~L 486 (766)
+||||||.|++++... ..-|+|||||.+-.+
T Consensus 816 IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 816 IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred ecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999999999997421 235999999987544
No 396
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=99.01 E-value=4.7e-09 Score=110.63 Aligned_cols=180 Identities=22% Similarity=0.275 Sum_probs=122.3
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
++||-|.-+-||.|.. +|.++|||.-|-|-. .+.. .+.--..+.. .....|..+- +...
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~Grt-sFrk----vk~~R~y~~~------~~h~sWl~~s---Rl~A------ 156 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRT-SFRK----VKRNRDYLAD------KEHGSWLYVS---RLAA------ 156 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCch-hhhh----hcchhhhhcc------ccCcchhhhH---HHHH------
Confidence 6899999999999999 799999999988832 2111 1111111110 0111232221 1122
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFH 457 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffH 457 (766)
.+|-..+.++. ..++.||+++. -+++++||||++|.+|..+.- ...+...+...+++.+-.. .+.|++|
T Consensus 157 ~rEf~~L~~L~-----~~G~~VP~P~~--~nRHaVvMe~ieG~eL~~~r~---~~en~~~il~~il~~~~~~-~~~GiVH 225 (304)
T COG0478 157 EREFEALQRLY-----PEGVKVPKPIA--WNRHAVVMEYIEGVELYRLRL---DVENPDEILDKILEEVRKA-YRRGIVH 225 (304)
T ss_pred HHHHHHHHHhh-----hcCCCCCCccc--cccceeeeehcccceeecccC---cccCHHHHHHHHHHHHHHH-HHcCccc
Confidence 23344444543 23588999995 478899999999999887531 2245667777777665444 4999999
Q ss_pred cCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004234 458 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 518 (766)
Q Consensus 458 aDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~ 518 (766)
+|+.+=||+|++ ||.+++|||-.+...+.+.-..+ +.+|.+.++..+.+-..
T Consensus 226 GDlSefNIlV~~--dg~~~vIDwPQ~v~~~hp~a~e~-------l~RDv~nii~yFrrky~ 277 (304)
T COG0478 226 GDLSEFNILVTE--DGDIVVIDWPQAVPISHPDAEEL-------LERDVENIIKYFRRKYG 277 (304)
T ss_pred cCCchheEEEec--CCCEEEEeCcccccCCCCCHHHH-------HHhHHHHHHHHHHHhcc
Confidence 999999999996 89999999999998877665443 35788888888877543
No 397
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.01 E-value=1.8e-09 Score=133.84 Aligned_cols=170 Identities=14% Similarity=0.169 Sum_probs=107.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|++|.||+|++ +|+.||||..+.... . .
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~---------------------------~----------------- 730 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-I---------------------------P----------------- 730 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-c---------------------------c-----------------
Confidence 6899999999999997 689999997632100 0 0
Q ss_pred HHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH--HHHHHHHHH--
Q 004234 377 YTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA--VESYLEQIL-- 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l--v~~~l~qI~-- 451 (766)
..|.+.+.++ ++++| .+-.++ ......++||||++|++|.++.. . .+.......+ +...+..+|
T Consensus 731 -~~~~~~l~~l-----~HpnIv~~~~~~-~~~~~~~lv~Ey~~~g~L~~~l~--~--l~~~~~~~i~~~ia~~L~yLH~~ 799 (968)
T PLN00113 731 -SSEIADMGKL-----QHPNIVKLIGLC-RSEKGAYLIHEYIEGKNLSEVLR--N--LSWERRRKIAIGIAKALRFLHCR 799 (968)
T ss_pred -HHHHHHHhhC-----CCCCcceEEEEE-EcCCCCEEEEeCCCCCcHHHHHh--c--CCHHHHHHHHHHHHHHHHHhccC
Confidence 0011112222 23332 222222 23456799999999999998753 1 2322222222 223466677
Q ss_pred -hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHH
Q 004234 452 -SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRR 530 (766)
Q Consensus 452 -~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~ 530 (766)
..+++|+|+||.||+++. ++..++ +||..+....... ..+.+.++++++...+..+...|++++..
T Consensus 800 ~~~~iiH~dlkp~Nil~~~--~~~~~~-~~~~~~~~~~~~~----------~~~t~~y~aPE~~~~~~~~~~sDv~S~Gv 866 (968)
T PLN00113 800 CSPAVVVGNLSPEKIIIDG--KDEPHL-RLSLPGLLCTDTK----------CFISSAYVAPETRETKDITEKSDIYGFGL 866 (968)
T ss_pred CCCCeecCCCCHHhEEECC--CCceEE-EeccccccccCCC----------ccccccccCcccccCCCCCcccchhhHHH
Confidence 569999999999999985 444443 3665544322211 12356788998888777888899999998
Q ss_pred HHHHHHH
Q 004234 531 TAQFFLN 537 (766)
Q Consensus 531 ~i~~~l~ 537 (766)
.+.+++.
T Consensus 867 vl~el~t 873 (968)
T PLN00113 867 ILIELLT 873 (968)
T ss_pred HHHHHHh
Confidence 8877764
No 398
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.01 E-value=2.9e-09 Score=117.52 Aligned_cols=186 Identities=20% Similarity=0.199 Sum_probs=135.9
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|.|+||.||-++- +|+-+|.|-. |-+-++ + =..|.-
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL----------~KKRiK-------k----------------------r~ge~m 231 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKL----------DKKRIK-------K----------------------RKGETM 231 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHH----------HHHHHH-------H----------------------hhhhHH
Confidence 5799999999999987 6888887743 111110 0 012333
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee-ccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHHHH--HHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW-EYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVE--SYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~-e~st~~vLVMEyieG~~L~d-~~~l~~~g~d~~~la~~lv~--~~l~qI~~ 452 (766)
-.+|..++++.... +.|--.|. +-.+..+|||..|+|+.|.- +-.+...|++..+..-..++ .-++.+|+
T Consensus 232 aLnEk~iL~kV~s~------FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~ 305 (591)
T KOG0986|consen 232 ALNEKQILEKVSSP------FIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR 305 (591)
T ss_pred hhHHHHHHHHhccC------cEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh
Confidence 35666666665432 22333332 33456799999999999874 33455567777666555544 44889999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
.+++.||+||.|||+++ .|++.|.|.|++..+++..... + --++..+|++++++-+..+-..|-.++.-.+
T Consensus 306 ~~iVYRDLKPeNILLDd--~GhvRISDLGLAvei~~g~~~~------~-rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCll 376 (591)
T KOG0986|consen 306 RRIVYRDLKPENILLDD--HGHVRISDLGLAVEIPEGKPIR------G-RVGTVGYMAPEVLQNEVYDFSPDWFSLGCLL 376 (591)
T ss_pred cceeeccCChhheeecc--CCCeEeeccceEEecCCCCccc------c-ccCcccccCHHHHcCCcccCCccHHHHHhHH
Confidence 99999999999999996 8999999999999998865421 1 2478999999999999988899999999998
Q ss_pred HHHHHH
Q 004234 533 QFFLNS 538 (766)
Q Consensus 533 ~~~l~~ 538 (766)
++++..
T Consensus 377 Yemi~G 382 (591)
T KOG0986|consen 377 YEMIAG 382 (591)
T ss_pred HHHHcc
Confidence 888764
No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.00 E-value=8.1e-10 Score=121.03 Aligned_cols=163 Identities=17% Similarity=0.286 Sum_probs=108.2
Q ss_pred ccCCCHHHHHHHHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-c----CeeEEEEEec
Q 004234 251 VDILAQEYVDELSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-K----GEEVVVKVQR 325 (766)
Q Consensus 251 ~DllP~e~~~eL~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l-~----G~~VAVKVqr 325 (766)
.|+.++...+++.+|+..+|-.. ..|. ..++||.|+|+.||+|++ . .+.||+|-.+
T Consensus 13 ~d~~~~~k~ee~~~l~q~~p~~~-----------------~~~~--~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~ 73 (418)
T KOG1167|consen 13 SDISAEDKGEEIEQLRQDIPFIS-----------------NAYK--VVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIY 73 (418)
T ss_pred hhcchhhhhhHHHHHHhhhhhhh-----------------hhhh--hhccccccchhhhhhhhHhhhccccceEeeeecc
Confidence 35555555577777776655322 2221 336899999999999998 3 5789999764
Q ss_pred CCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCCCCcccccee
Q 004234 326 PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAA---NAELFASNFKDMDYVKVPTI 402 (766)
Q Consensus 326 P~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~---Nl~~f~~~f~~~~~V~vP~v 402 (766)
+-... . .+..|+.+..++. |+......++.
T Consensus 74 ~ts~p------------------------------~--------ri~~El~~L~~~gG~~ni~~~~~~~rn--------- 106 (418)
T KOG1167|consen 74 RTSSP------------------------------S--------RILNELEMLYRLGGSDNIIKLNGCFRN--------- 106 (418)
T ss_pred cccCc------------------------------h--------HHHHHHHHHHHhccchhhhcchhhhcc---------
Confidence 32211 1 2334555555543 44444444433
Q ss_pred eeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHhCCccccCCCCCcEEEeecCCCcEEEEee
Q 004234 403 FWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDF 480 (766)
Q Consensus 403 ~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~--l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDF 480 (766)
.+..++||||++-....++.. +++...+-..+...+ +.++|..|++|+|+||+|++.+. ..++-.|+||
T Consensus 107 ----nd~v~ivlp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~-~t~rg~LvDF 177 (418)
T KOG1167|consen 107 ----NDQVAIVLPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR-RTQRGVLVDF 177 (418)
T ss_pred ----CCeeEEEecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-ccCCceEEec
Confidence 456789999999888777642 234444444444433 77889999999999999999986 5788999999
Q ss_pred cceeccCh
Q 004234 481 GMMGSISP 488 (766)
Q Consensus 481 Glv~~L~~ 488 (766)
|++...+.
T Consensus 178 gLA~~~d~ 185 (418)
T KOG1167|consen 178 GLAQRYDG 185 (418)
T ss_pred hhHHHHHh
Confidence 99986433
No 400
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.00 E-value=2.7e-10 Score=123.93 Aligned_cols=186 Identities=19% Similarity=0.143 Sum_probs=117.6
Q ss_pred ccccccceeEEEEEeecC--eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKG--EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G--~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|.||||.|-.|..+| +.+||||.+.++--+ ..|++.- +.++..-...+. +.
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQ-dDDvect-----m~EKrvLAL~~k---pp--------------- 410 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQ-DDDVECT-----MVEKRVLALPGK---PP--------------- 410 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeee-cCcccce-----ehhhhheecCCC---Cc---------------
Confidence 689999999999999954 679999998775322 1111110 000000000000 00
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHHHHHHHHHHHhCCc
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYLEQILSHGF 455 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l~~~g~d~~~la~~lv~~~l~qI~~~Gf 455 (766)
-+..+...|+. -.+.+.||||+.|+.|-- +++...........-..-+...|--+|..|+
T Consensus 411 ------FL~qlHScFQT-------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgI 471 (683)
T KOG0696|consen 411 ------FLVQLHSCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGI 471 (683)
T ss_pred ------hHHHHHHHhhh-------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCe
Confidence 01112222222 246789999999998875 3333332222222222233344566889999
Q ss_pred cccCCCCCcEEEeecCCCcEEEEeecceecc--ChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 456 FHADPHPGNIAVDDVNGGRLIFYDFGMMGSI--SPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 456 fHaDpHPGNILV~~~~~g~l~LiDFGlv~~L--~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
+.||+|-.|||++. +|+|+|.||||+..- +..+. ....+++++++++++...-.....|-+++...++
T Consensus 472 iYRDLKLDNvmLd~--eGHiKi~DFGmcKEni~~~~TT--------kTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLy 541 (683)
T KOG0696|consen 472 IYRDLKLDNVMLDS--EGHIKIADFGMCKENIFDGVTT--------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 541 (683)
T ss_pred eeeeccccceEecc--CCceEeeecccccccccCCcce--------eeecCCCcccccceEEecccccchhHHHHHHHHH
Confidence 99999999999986 999999999999752 22221 1235799999999998877777889999988776
Q ss_pred HHHH
Q 004234 534 FFLN 537 (766)
Q Consensus 534 ~~l~ 537 (766)
+++.
T Consensus 542 Emla 545 (683)
T KOG0696|consen 542 EMLA 545 (683)
T ss_pred HHHc
Confidence 6653
No 401
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.00 E-value=9e-10 Score=125.91 Aligned_cols=122 Identities=18% Similarity=0.184 Sum_probs=86.9
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCC-CHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceec
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGV-DRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 485 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~-d~~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~ 485 (766)
....++|||.+.|+-+-+-........ ....++..++ .++..+|.+|+||||+||+|||+.. ..|.|.|+|||....
T Consensus 388 ~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv-~Av~~LH~~gvvhRDLkp~NIL~~~-~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 388 GKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELV-SAVDYLHEQGVVHRDLKPGNILLDG-SAGHLRLTYFGFWSE 465 (612)
T ss_pred CceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHH-HHHHHHHhcCeeecCCChhheeecC-CCCcEEEEEechhhh
Confidence 456799999999987766332111111 1112333332 3578899999999999999999952 478999999999999
Q ss_pred cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHH
Q 004234 486 ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSF 539 (766)
Q Consensus 486 L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~ 539 (766)
+.++-.. . .-+-.++++++...--.++.+|.+++...++.+|..+
T Consensus 466 ~~~~~~t---p------~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~ 510 (612)
T KOG0603|consen 466 LERSCDT---P------ALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR 510 (612)
T ss_pred Cchhhcc---c------chhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence 8776110 0 1245677888888766788899999999988887653
No 402
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.98 E-value=1.1e-09 Score=110.52 Aligned_cols=172 Identities=18% Similarity=0.212 Sum_probs=104.9
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
-||.|.+|||-+-++ +|+-.|||-.+--+.. ...+.+..|+|.
T Consensus 53 elGrGayG~vekmrh~~sg~imAvKri~~tvn~-----------------------------------q~q~r~L~dldi 97 (282)
T KOG0984|consen 53 ELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-----------------------------------QEQKRLLMDLDI 97 (282)
T ss_pred hhcCCccchhhheeeccCCeEEEEeeehhhcCh-----------------------------------HHHHHHHHhhhh
Confidence 489999999988888 7999999966432221 112233344443
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec-----cCCCeEEEEeecCCCChhhhh--hhhhcCCCHHHHHHHHHHHH---H
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWE-----YTTPQILTMEYVPGIKINRIQ--SLDELGVDRKRLGRYAVESY---L 447 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-----~st~~vLVMEyieG~~L~d~~--~l~~~g~d~~~la~~lv~~~---l 447 (766)
.+ ..+..|..+.- -+.+.++.||-++- +++.+- .++..+.-++.+...++-.. +
T Consensus 98 ~~---------------r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al 161 (282)
T KOG0984|consen 98 IM---------------RTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHAL 161 (282)
T ss_pred hc---------------cCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHH
Confidence 21 11233333322 25678999999873 455432 23333433444444443333 3
Q ss_pred HHHH-hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC----CC
Q 004234 448 EQIL-SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV----PT 522 (766)
Q Consensus 448 ~qI~-~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~----~~ 522 (766)
..+| .-.++|||.||+|||++. +|+++++|||.++.+.+.... .+..+=..|++++.++-+.-. -.
T Consensus 162 ~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDFGIsG~L~dSiAk-------t~daGCkpYmaPEri~~e~n~~gY~vk 232 (282)
T KOG0984|consen 162 EFLHSKLSVIHRDVKPSNILINY--DGQVKICDFGISGYLVDSIAK-------TMDAGCKPYMAPERINPELNQKGYSVK 232 (282)
T ss_pred HHHHHHhhhhhccCCcceEEEcc--CCcEEEcccccceeehhhhHH-------HHhcCCCccCChhhcCcccCcccceee
Confidence 4444 458999999999999996 999999999999999765332 222344556666666544322 24
Q ss_pred CCHHHHHHH
Q 004234 523 GDTTAVRRT 531 (766)
Q Consensus 523 ~D~~~l~~~ 531 (766)
+|++++.-.
T Consensus 233 sDvWSLGIt 241 (282)
T KOG0984|consen 233 SDVWSLGIT 241 (282)
T ss_pred hhhhhhhhh
Confidence 577766643
No 403
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.98 E-value=2.8e-09 Score=118.70 Aligned_cols=183 Identities=18% Similarity=0.195 Sum_probs=114.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHH-HHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDEC-ASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~-~~~l~~El 375 (766)
+.||+|-|+.|-.|++ +|+.|||||.-.- +. +++ ...+.+
T Consensus 24 kTlG~GHFAVVKLArHVFTGekVAVKviDKT-----------------------------Kl------D~~st~hlfq-- 66 (864)
T KOG4717|consen 24 KTLGRGHFAVVKLARHVFTGEKVAVKVIDKT-----------------------------KL------DTLSTGHLFQ-- 66 (864)
T ss_pred hhhcCCceehhhhhhhhcccceeEEEEeccc-----------------------------cc------chhhhhHHHH--
Confidence 6799999999999998 8999999997210 00 111 112223
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH---HHHHHh
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY---LEQILS 452 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~---l~qI~~ 452 (766)
|.+-|. ..++..-|+.-.|+ +-.++.+|+.|.=+|+.|.|++--...|+.. .++..-+..+ +.++|.
T Consensus 67 ----EVRCMK----LVQHpNiVRLYEVi-DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E-~La~kYF~QI~~AI~YCHq 136 (864)
T KOG4717|consen 67 ----EVRCMK----LVQHPNIVRLYEVI-DTQTKLYLILELGDGGDLFDYIMKHEEGLNE-DLAKKYFAQIVHAISYCHQ 136 (864)
T ss_pred ----HHHHHH----HhcCcCeeeeeehh-cccceEEEEEEecCCchHHHHHHhhhccccH-HHHHHHHHHHHHHHHHHhh
Confidence 333333 23333333443444 3357789999999999999976433344332 2222221111 233456
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCCCCCCCCHHHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGVLVPTGDTTAVRRT 531 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~-~lG~~~~~~D~~~l~~~ 531 (766)
-.++|+|+||+|+.+-+ .-|-++|.|||+...+-|..+-. .+ .+...|-+++++ .-.+-.|..|++++...
T Consensus 137 LHVVHRDLKPENVVFFE-KlGlVKLTDFGFSNkf~PG~kL~---Ts----CGSLAYSAPEILLGDsYDAPAVDiWSLGVI 208 (864)
T KOG4717|consen 137 LHVVHRDLKPENVVFFE-KLGLVKLTDFGFSNKFQPGKKLT---TS----CGSLAYSAPEILLGDSYDAPAVDIWSLGVI 208 (864)
T ss_pred hhhhcccCCcceeEEee-ecCceEeeeccccccCCCcchhh---cc----cchhhccCchhhhcCccCCcchhhhHHHHH
Confidence 67999999999998765 57899999999999988765422 22 233334444443 22344577899999887
Q ss_pred HHHHH
Q 004234 532 AQFFL 536 (766)
Q Consensus 532 i~~~l 536 (766)
++-++
T Consensus 209 LyMLV 213 (864)
T KOG4717|consen 209 LYMLV 213 (864)
T ss_pred HHHHH
Confidence 65544
No 404
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.97 E-value=2.7e-09 Score=114.08 Aligned_cols=142 Identities=18% Similarity=0.310 Sum_probs=102.1
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.||||..+.|+. ++++||||.- |. +-+-..+-+|+
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfE--------------------------Pr----kS~APQLrdEY--------- 74 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFE--------------------------PR----KSEAPQLRDEY--------- 74 (449)
T ss_pred cccccCcceeeecccccccCceEEEEec--------------------------cc----cCCcchHHHHH---------
Confidence 5799999999999997 8999999964 11 00111222222
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~--l~qI~~ 452 (766)
++.+.+... .-||.||. ...-.++||||.+ |.+|.|+..+....++.+.++-...+.+ ++.+|.
T Consensus 75 ---------r~YKlL~g~--~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~ 142 (449)
T KOG1165|consen 75 ---------RTYKLLGGT--EGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHE 142 (449)
T ss_pred ---------HHHHHHcCC--CCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHh
Confidence 244444443 45677774 3334579999987 8899999887777788887776665544 778999
Q ss_pred CCccccCCCCCcEEEeecC---CCcEEEEeecceecc-ChhhH
Q 004234 453 HGFFHADPHPGNIAVDDVN---GGRLIFYDFGMMGSI-SPNIR 491 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~---~g~l~LiDFGlv~~L-~~~~r 491 (766)
+.++.||+||.|+||..+. ...|.++||||++.+ ++++.
T Consensus 143 k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~Tk 185 (449)
T KOG1165|consen 143 KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTK 185 (449)
T ss_pred cceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcccc
Confidence 9999999999999997521 246999999999976 44443
No 405
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.96 E-value=5.6e-10 Score=116.22 Aligned_cols=139 Identities=22% Similarity=0.340 Sum_probs=89.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.-||.|+||.||+-++ .|+..|||-+|-...+. -..++..|.|
T Consensus 70 g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~k-----------------------------------eq~rll~e~d 114 (361)
T KOG1006|consen 70 GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEK-----------------------------------EQKRLLMEHD 114 (361)
T ss_pred HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchH-----------------------------------HHHHHHHHHH
Confidence 4699999999999999 59999999875433211 1223444555
Q ss_pred HHHHHH---HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhh----hhhcCCCHHHHHHHH---HHHH
Q 004234 377 YTQEAA---NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQS----LDELGVDRKRLGRYA---VESY 446 (766)
Q Consensus 377 f~~EA~---Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~----l~~~g~d~~~la~~l---v~~~ 446 (766)
-...+. |+.+|....-. .+..|++||.++ .+++.+-. ..+..+...-++... +++
T Consensus 115 ~~mks~~cp~IVkfyGa~F~-------------EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~A- 179 (361)
T KOG1006|consen 115 TVMKSSNCPNIVKFYGALFS-------------EGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDA- 179 (361)
T ss_pred HHHhhcCCcHHHHHhhhhhc-------------CCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhH-
Confidence 544443 67777654321 367899999987 34444211 111112222122111 122
Q ss_pred HHHHH-hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 447 LEQIL-SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 447 l~qI~-~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
|..+- ...++|||+||.|||++. .|.++|+|||++|++-+.
T Consensus 180 L~yLK~~lkiIHRDvKPSNILldr--~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 180 LDYLKEELKIIHRDVKPSNILLDR--HGDVKLCDFGICGQLVDS 221 (361)
T ss_pred HHHHHHHhhhhhccCChhheEEec--CCCEeeecccchHhHHHH
Confidence 33333 578999999999999996 899999999999988553
No 406
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.94 E-value=7.8e-10 Score=112.98 Aligned_cols=225 Identities=16% Similarity=0.220 Sum_probs=135.4
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|.|.++.|+.|.. +.+.++||+.+|--.+.|.++++||..+..-
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg------------------------------- 92 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGG------------------------------- 92 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCC-------------------------------
Confidence 4689999999999996 7899999999999888999988888765410
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~G 454 (766)
.|+..+....++ ..|....|+.||++......+-. .+.-..+...+.+ ..+..+|..|
T Consensus 93 -----~NIi~L~DiV~D-----------p~SktpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~G 152 (338)
T KOG0668|consen 93 -----PNIIKLLDIVKD-----------PESKTPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMG 152 (338)
T ss_pred -----CCeeehhhhhcC-----------ccccCchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcC
Confidence 011111111111 12344568889998876554321 0111222222222 2367789999
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQF 534 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~ 534 (766)
++|+|.||.|+++++ ..-++.|||||++-.+-+..-.+.. +.+-.-+-++.++ +.....=+.|++++...+..
T Consensus 153 ImHRDVKPhNvmIdh-~~rkLrlIDWGLAEFYHp~~eYnVR--VASRyfKGPELLV----dy~~YDYSLD~WS~GcmlA~ 225 (338)
T KOG0668|consen 153 IMHRDVKPHNVMIDH-ELRKLRLIDWGLAEFYHPGKEYNVR--VASRYFKGPELLV----DYQMYDYSLDMWSLGCMLAS 225 (338)
T ss_pred cccccCCcceeeech-hhceeeeeecchHhhcCCCceeeee--eehhhcCCchhee----echhccccHHHHHHHHHHHH
Confidence 999999999999986 4568999999999988775443321 0111122333322 22223334578888766544
Q ss_pred HHHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHH--HHHHHHHhhCCCcCCchhhhhh
Q 004234 535 FLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIG--EDLLAIAADQPFRFPATFTFVV 602 (766)
Q Consensus 535 ~l~~~~~~l~~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~--~~l~~l~~~~~i~lP~~~~ll~ 602 (766)
++-.= +.+ |. .-+... +-.+++.++ +++..-..+|++.+||.|--++
T Consensus 226 miFrk---------------epF-Fh-G~dN~D----QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~ 274 (338)
T KOG0668|consen 226 MIFRK---------------EPF-FH-GHDNYD----QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDIL 274 (338)
T ss_pred HHhcc---------------Ccc-cC-CCCCHH----HHHHHHHHhChHHHHHHHHHHccCCChhHhhHh
Confidence 43210 011 21 111111 123455554 4677888888888888776543
No 407
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.94 E-value=1.2e-09 Score=123.72 Aligned_cols=101 Identities=18% Similarity=0.235 Sum_probs=72.0
Q ss_pred cCCCeEEEEeecCCCChhhhhhhhhcCCCHH--HHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecce
Q 004234 406 YTTPQILTMEYVPGIKINRIQSLDELGVDRK--RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 483 (766)
Q Consensus 406 ~st~~vLVMEyieG~~L~d~~~l~~~g~d~~--~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv 483 (766)
|.+..++..|||.|+-++.+.---..++... ++...-+...|..+|...++|+|+|.||||++- +|.|.|.|||..
T Consensus 100 ~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVS 177 (1187)
T KOG0579|consen 100 FENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVS 177 (1187)
T ss_pred ccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccc
Confidence 4678899999999999987542212223322 333333445588899999999999999999997 999999999998
Q ss_pred eccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004234 484 GSISPNIREGLLEAFYGIYEKDADKVLQAMV 514 (766)
Q Consensus 484 ~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~ 514 (766)
......... .+.| -+++.+|++++.
T Consensus 178 AKn~~t~qk--RDsF----IGTPYWMAPEVv 202 (1187)
T KOG0579|consen 178 AKNKSTRQK--RDSF----IGTPYWMAPEVV 202 (1187)
T ss_pred ccchhHHhh--hccc----cCCcccccchhe
Confidence 876543222 2223 347778887765
No 408
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.92 E-value=2e-08 Score=100.52 Aligned_cols=148 Identities=20% Similarity=0.262 Sum_probs=100.7
Q ss_pred CcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.+++-.|.-|.|+++.+.|+..+||-.-|.-...-..|.++-+ . .
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr----------------------------~------R 56 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTR----------------------------K------R 56 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHH----------------------------H------H
Confidence 45789999999999999999999999765444333233322211 0 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCC-Chhhhhh-hhhcCCCHHHHHH--HHHHHHHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGI-KINRIQS-LDELGVDRKRLGR--YAVESYLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~-~L~d~~~-l~~~g~d~~~la~--~lv~~~l~qI~~ 452 (766)
..+||+-+.+++.. .+.+|.+|..-.....|.|||++|. ++.+... ......+...++. .-+-..+.-+|.
T Consensus 57 t~~Ear~l~k~~~~-----GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ 131 (229)
T KOG3087|consen 57 TKQEARLLAKCRAL-----GIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD 131 (229)
T ss_pred HHHHHHHHHHHHHh-----CCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh
Confidence 35678877777652 6899999987777889999999994 4444322 1112222222111 123344667899
Q ss_pred CCccccCCCCCcEEEeecCCCc--EEEEeeccee
Q 004234 453 HGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMG 484 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~--l~LiDFGlv~ 484 (766)
.+++|+|+...||++.+ ++++ +.++|||+..
T Consensus 132 ndiiHGDLTTSNill~~-~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 132 NDIIHGDLTTSNILLRS-DGNQITPILIDFGLSS 164 (229)
T ss_pred CCeecccccccceEEec-CCCcCceEEEeecchh
Confidence 99999999999999986 3445 4999999764
No 409
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=3.1e-09 Score=117.15 Aligned_cols=169 Identities=20% Similarity=0.228 Sum_probs=106.9
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+-||.|-||.|+||.++|+.|||||-.---++. | ++|- .+++-.-++
T Consensus 217 e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~S----------------------------W---frEt--EIYqTvmLR 263 (513)
T KOG2052|consen 217 EIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERS----------------------------W---FRET--EIYQTVMLR 263 (513)
T ss_pred EEecCccccceeeccccCCceEEEEecccchhh----------------------------h---hhHH--HHHHHHHhc
Confidence 679999999999999999999999872211111 1 0100 000000011
Q ss_pred HHHHHHHHHHH-hcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHH----
Q 004234 379 QEAANAELFAS-NFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQIL---- 451 (766)
Q Consensus 379 ~EA~Nl~~f~~-~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~---- 451 (766)
..|+-.|-. ..++. ...|+.+||++|-+.++|.|+.. ...++........... -+.++|
T Consensus 264 --HENILgFIaaD~~~~----------gs~TQLwLvTdYHe~GSL~DyL~--r~tv~~~~ml~LalS~AsGLaHLH~eI~ 329 (513)
T KOG2052|consen 264 --HENILGFIAADNKDN----------GSWTQLWLVTDYHEHGSLYDYLN--RNTVTTEGMLKLALSIASGLAHLHMEIV 329 (513)
T ss_pred --cchhhhhhhccccCC----------CceEEEEEeeecccCCcHHHHHh--hccCCHHHHHHHHHHHhhhHHHHHHHHh
Confidence 124444422 11111 23578899999999999999853 3445555544444332 245555
Q ss_pred ----hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC
Q 004234 452 ----SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV 518 (766)
Q Consensus 452 ----~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~ 518 (766)
.-.+-|||+|.-||||.. +|..+|.|+|++-+.+.... ..+.--.---++..||+|++++-.+
T Consensus 330 GTqgKPaIAHRDlKSKNILVKk--n~~C~IADLGLAv~h~~~t~--~idi~~N~rVGTKRYMAPEvLdeti 396 (513)
T KOG2052|consen 330 GTQGKPAIAHRDLKSKNILVKK--NGTCCIADLGLAVRHDSDTD--TIDIPPNPRVGTKRYMAPEVLDETI 396 (513)
T ss_pred cCCCCchhhccccccccEEEcc--CCcEEEeeceeeEEecccCC--cccCCCCCccceeeccChHHhhhhc
Confidence 345999999999999986 89999999999988766542 1111111123678899999987544
No 410
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.91 E-value=5.1e-09 Score=117.88 Aligned_cols=183 Identities=18% Similarity=0.222 Sum_probs=116.2
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+-||+|+-..||++.- +.+-+|+|-..- . ..|.. .++ -|
T Consensus 367 k~iG~GGSSkV~kV~~s~~~iyalkkv~~-------------------~----------~~D~q-tl~----------gy 406 (677)
T KOG0596|consen 367 KQIGSGGSSKVFKVLNSDKQIYALKKVVL-------------------L----------EADNQ-TLD----------GY 406 (677)
T ss_pred HhhcCCCcceeeeeecCCCcchhhhHHHH-------------------h----------hcCHH-HHH----------HH
Confidence 5799999999999998 455666652200 0 00111 111 36
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeec-c-CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHH---HHHHHHHHHHHh
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWE-Y-TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGR---YAVESYLEQILS 452 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e-~-st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~---~lv~~~l~qI~~ 452 (766)
++|..-+.+|.++ ..|-..|.- . .+-.+|||||=+ +.|+.+..-... .++..... .-+-.+.+.||.
T Consensus 407 ~nEI~lL~KLkg~------~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 407 RNEIALLNKLKGH------DKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred HHHHHHHHHhcCC------ceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHH
Confidence 6777777777543 334444432 2 245699999843 567776543222 22211111 122234677899
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH-HcCC----------CCC
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV-QMGV----------LVP 521 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~-~lG~----------~~~ 521 (766)
+|++|.|+||.|+++- .|.++|||||++..+.+++..-+.+-= .+++.||.++.+ +|.. +.+
T Consensus 479 ~gIVHSDLKPANFLlV---kG~LKLIDFGIA~aI~~DTTsI~kdsQ----vGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r 551 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV---KGRLKLIDFGIANAIQPDTTSIVKDSQ----VGTVNYMSPEALTDMSSSRENGKSKIKISR 551 (677)
T ss_pred hceeecCCCcccEEEE---eeeEEeeeechhcccCccccceeeccc----cCcccccCHHHHhhccccccCCCcceeecC
Confidence 9999999999999987 699999999999999877654433322 356677766544 2321 456
Q ss_pred CCCHHHHHHHHHHHH
Q 004234 522 TGDTTAVRRTAQFFL 536 (766)
Q Consensus 522 ~~D~~~l~~~i~~~l 536 (766)
..|++++.-.++.++
T Consensus 552 ~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 552 KSDVWSLGCILYQMV 566 (677)
T ss_pred ccchhhhhhHHHHHH
Confidence 789999999888775
No 411
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=4.4e-09 Score=112.07 Aligned_cols=241 Identities=19% Similarity=0.277 Sum_probs=148.6
Q ss_pred hhccCc-ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHH
Q 004234 293 FERFDV-EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECAS 369 (766)
Q Consensus 293 F~~fd~-~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~ 369 (766)
..+|+. ..||.||++.|-.+++ +.+-+|+||.+...... ...+||+..-..+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-----------------------dedidwvqtek~v-- 303 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-----------------------DEDIDWVQTEKHV-- 303 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-----------------------cccchhHHhhHHH--
Confidence 345665 7899999999999999 47899999875432211 1123454321111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhh-hhhhhhcCCCHHHHHHHHHHHHH
Q 004234 370 VLYQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINR-IQSLDELGVDRKRLGRYAVESYL 447 (766)
Q Consensus 370 ~l~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l~~~g~d~~~la~~lv~~~l 447 (766)
| +.-.+.|.+ -....+ .-.++.+.|.||++|+.|-- +...++......+.-..-+...+
T Consensus 304 -----------------f-e~asn~pflvglhscf-qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal 364 (593)
T KOG0695|consen 304 -----------------F-EQASNNPFLVGLHSCF-QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLAL 364 (593)
T ss_pred -----------------H-HhccCCCeEEehhhhh-cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHH
Confidence 1 011122211 111111 22466799999999998763 33333333333344444455668
Q ss_pred HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceec-cChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHH
Q 004234 448 EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS-ISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 526 (766)
Q Consensus 448 ~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~-L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~ 526 (766)
..+|+.|++.+|+|-.|++++. .|.|+|.|+||++. +.+.+. .+...+++.+++++++.-....-..|-+
T Consensus 365 ~flh~rgiiyrdlkldnvllda--eghikltdygmcke~l~~gd~-------tstfcgtpnyiapeilrgeeygfsvdww 435 (593)
T KOG0695|consen 365 NFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGLGPGDT-------TSTFCGTPNYIAPEILRGEEYGFSVDWW 435 (593)
T ss_pred HHHhhcCeeeeeccccceEEcc--CCceeecccchhhcCCCCCcc-------cccccCCCcccchhhhcccccCceehHH
Confidence 8899999999999999999986 89999999999975 333322 2334679999999999765555567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhCCCcCCchhhhhhhhhh
Q 004234 527 AVRRTAQFFLNSFEERLAAQRKEREITTQELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFS 606 (766)
Q Consensus 527 ~l~~~i~~~l~~~~~~l~~~r~~~~~~~~~~~f~~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~i~lP~~~~ll~Ral~ 606 (766)
++...+-+++.. |.. .+-.|..+|- .+. -.-++++..+..+++|+.+. +|+..
T Consensus 436 algvlmfemmag--------rsp----fdivgm~n~d----------~nt---edylfqvilekqiriprsls--vkas~ 488 (593)
T KOG0695|consen 436 ALGVLMFEMMAG--------RSP----FDIVGMDNPD----------MNT---EDYLFQVILEKQIRIPRSLS--VKASH 488 (593)
T ss_pred HHHHHHHHHHcC--------CCC----cceecCCCcc----------cch---hHHHHHHHhhhcccccceee--hhhHH
Confidence 887655443321 100 0011111110 111 12356677788999999854 78888
Q ss_pred hHhhhhc
Q 004234 607 VLDGIGK 613 (766)
Q Consensus 607 ~lEGi~~ 613 (766)
+|.|...
T Consensus 489 vlkgfln 495 (593)
T KOG0695|consen 489 VLKGFLN 495 (593)
T ss_pred HHHHhhc
Confidence 8887764
No 412
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.90 E-value=1.6e-09 Score=107.23 Aligned_cols=141 Identities=23% Similarity=0.280 Sum_probs=92.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|.+|.|++|+. +++-||+|-.|-+-.+. .+..+..+|+-
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrldddde----------------------------------gvpssalreic 53 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE----------------------------------GVPSSALREIC 53 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCC----------------------------------CCcHHHHHHHH
Confidence 5799999999999998 58999999775332111 11234456777
Q ss_pred HHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHH-HHHH--HHHHH
Q 004234 377 YTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYA-VESY--LEQIL 451 (766)
Q Consensus 377 f~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~l-v~~~--l~qI~ 451 (766)
..+|.+ |+.++...+.. ..+..||.|||+- .|..+...-...+|.. +++.. ++.. +...|
T Consensus 54 llkelkhknivrl~dvlhs-------------dkkltlvfe~cdq-dlkkyfdslng~~d~~-~~rsfmlqllrgl~fch 118 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHDVLHS-------------DKKLTLVFEFCDQ-DLKKYFDSLNGDLDPE-IVRSFMLQLLRGLGFCH 118 (292)
T ss_pred HHHHhhhcceeehhhhhcc-------------CceeEEeHHHhhH-HHHHHHHhcCCcCCHH-HHHHHHHHHHhhhhhhh
Confidence 777765 55555443322 3456799999974 2333221111223433 22222 2221 34457
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhh
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI 490 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~ 490 (766)
.+++.|+|+||.|++++. +|.+++.|||+++-+.-..
T Consensus 119 shnvlhrdlkpqnllin~--ngelkladfglarafgipv 155 (292)
T KOG0662|consen 119 SHNVLHRDLKPQNLLINR--NGELKLADFGLARAFGIPV 155 (292)
T ss_pred hhhhhhccCCcceEEecc--CCcEEecccchhhhcCCce
Confidence 899999999999999986 8999999999998776544
No 413
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.90 E-value=7.9e-09 Score=115.49 Aligned_cols=173 Identities=26% Similarity=0.340 Sum_probs=102.4
Q ss_pred cccccceeEEEEEee--cCeeEEEEEecCCc--cchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARL--KGEEVVVKVQRPGL--KDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 300 PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i--~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
-.|.|-|+.|.+|.. .|..|||||+|-+- .+.=...+.+|+.+.. ..|
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~----AD~------------------------ 490 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLND----ADP------------------------ 490 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhc----cCc------------------------
Confidence 579999999999999 59999999997652 2222334444444321 111
Q ss_pred HHHHHH-HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcC----CCHHHHHHHHHHHHHHH-
Q 004234 376 DYTQEA-ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELG----VDRKRLGRYAVESYLEQ- 449 (766)
Q Consensus 376 Df~~EA-~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g----~d~~~la~~lv~~~l~q- 449 (766)
|- .+..++...|.+ -...|||.|-+. ..|.++ +...| +..+. ++.|.+|
T Consensus 491 ----Edk~Hclrl~r~F~h-------------knHLClVFE~Ls-lNLRev--LKKyG~nvGL~ika-----VRsYaqQL 545 (752)
T KOG0670|consen 491 ----EDKFHCLRLFRHFKH-------------KNHLCLVFEPLS-LNLREV--LKKYGRNVGLHIKA-----VRSYAQQL 545 (752)
T ss_pred ----hhhhHHHHHHHHhhh-------------cceeEEEehhhh-chHHHH--HHHhCcccceeehH-----HHHHHHHH
Confidence 11 133333334432 345677777542 233343 22322 22222 3444444
Q ss_pred ------HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCC-C
Q 004234 450 ------ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVP-T 522 (766)
Q Consensus 450 ------I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~-~ 522 (766)
+-..||+|+|+||.||||+. ....++|||||.+...++..-..|+ ++-+.+-++-| +|+.-. .
T Consensus 546 flALklLK~c~vlHaDIKPDNiLVNE-~k~iLKLCDfGSA~~~~eneitPYL---VSRFYRaPEIi------LG~~yd~~ 615 (752)
T KOG0670|consen 546 FLALKLLKKCGVLHADIKPDNILVNE-SKNILKLCDFGSASFASENEITPYL---VSRFYRAPEII------LGLPYDYP 615 (752)
T ss_pred HHHHHHHHhcCeeecccCccceEecc-CcceeeeccCccccccccccccHHH---HHHhccCccee------ecCcccCC
Confidence 44799999999999999986 4567999999999999887655542 22222333322 454332 3
Q ss_pred CCHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFF 535 (766)
Q Consensus 523 ~D~~~l~~~i~~~ 535 (766)
.|++++...++++
T Consensus 616 iD~WSvgctLYEl 628 (752)
T KOG0670|consen 616 IDTWSVGCTLYEL 628 (752)
T ss_pred ccceeeceeeEEe
Confidence 4777777655543
No 414
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.87 E-value=2.1e-09 Score=126.25 Aligned_cols=184 Identities=16% Similarity=0.150 Sum_probs=126.6
Q ss_pred ccccccceeEEEEEeec-------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK-------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~-------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
+-+|.|.||.||.|... -+-||||..+-....
T Consensus 492 ~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~----------------------------------------- 530 (774)
T KOG1026|consen 492 EELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN----------------------------------------- 530 (774)
T ss_pred hhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH-----------------------------------------
Confidence 46999999999999983 256999976332221
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-------cC------CCHHHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-------LG------VDRKRL 438 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-------~g------~d~~~l 438 (766)
....||++||.-+..|. +++|.----+.-.....+||.|||+-++|.++..... .+ ++..++
T Consensus 531 ~~~~dF~REaeLla~l~-----H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~ 605 (774)
T KOG1026|consen 531 QARQDFRREAELLAELQ-----HPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQF 605 (774)
T ss_pred HHHHHHHHHHHHHHhcc-----CCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHH
Confidence 13458999998776663 3433322222233567899999999999999764321 11 334444
Q ss_pred HHHHHH--HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHH-HHHHHHhhcCHHHHHHHHHH
Q 004234 439 GRYAVE--SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLL-EAFYGIYEKDADKVLQAMVQ 515 (766)
Q Consensus 439 a~~lv~--~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~-~l~~a~~~~D~~~v~~~l~~ 515 (766)
.....+ +-+..+-.+.|+|+|+-..|.||.+ +-.+||.||||++.+-..+-.... +.++ -...|.++-+.
T Consensus 606 L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge--~l~VKIsDfGLsRdiYssDYYk~~~~t~l-----PIRWMppEsIl 678 (774)
T KOG1026|consen 606 LHIATQIAAGMEYLSSHHFVHRDLATRNCLVGE--NLVVKISDFGLSRDIYSSDYYKVRGNTLL-----PIRWMPPESIL 678 (774)
T ss_pred HHHHHHHHHHHHHHHhCcccccchhhhhceecc--ceEEEecccccchhhhhhhhhcccCCcee-----eeecCCHHHhh
Confidence 444433 4466677999999999999999985 678999999999976443322211 1111 25678889999
Q ss_pred cCCCCCCCCHHHHHHHHHHH
Q 004234 516 MGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 516 lG~~~~~~D~~~l~~~i~~~ 535 (766)
.|-.+..+|+.++...+=++
T Consensus 679 y~kFTteSDVWs~GVvLWEI 698 (774)
T KOG1026|consen 679 YGKFTTESDVWSFGVVLWEI 698 (774)
T ss_pred cCcccchhhhhhhhhhhhhh
Confidence 99999999999999766444
No 415
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=98.87 E-value=4e-09 Score=110.25 Aligned_cols=73 Identities=21% Similarity=0.334 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHHHHH----hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHH
Q 004234 434 DRKRLGRYAVESYLEQIL----SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKV 509 (766)
Q Consensus 434 d~~~la~~lv~~~l~qI~----~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v 509 (766)
-+++++..+.-+..+.++ .||++|||.||.|||+++ .|.|+|+|||++|++.+..... -..+=+.||
T Consensus 188 iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe--~GniKlCDFGIsGrlvdSkAht-------rsAGC~~YM 258 (391)
T KOG0983|consen 188 IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE--RGNIKLCDFGISGRLVDSKAHT-------RSAGCAAYM 258 (391)
T ss_pred chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc--CCCEEeecccccceeecccccc-------cccCCcccc
Confidence 345555554444433333 699999999999999986 8999999999999997653321 123445566
Q ss_pred HHHHHH
Q 004234 510 LQAMVQ 515 (766)
Q Consensus 510 ~~~l~~ 515 (766)
+++-++
T Consensus 259 aPERid 264 (391)
T KOG0983|consen 259 APERID 264 (391)
T ss_pred CccccC
Confidence 665543
No 416
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=98.87 E-value=5e-09 Score=122.57 Aligned_cols=180 Identities=18% Similarity=0.180 Sum_probs=123.8
Q ss_pred cccccccceeE-EEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQ-VHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 298 ~~PIgsaSiGQ-VhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
++-+|.|+-|. ||+|...|++||||-. +.|+.....+|++
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye~R~VAVKrl---------------------------------------l~e~~~~A~rEi~ 554 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYEGREVAVKRL---------------------------------------LEEFFDFAQREIQ 554 (903)
T ss_pred HHHcccCCCCcEEEEEeeCCceehHHHH---------------------------------------hhHhHHHHHHHHH
Confidence 45677888875 6999999999999932 3445555567777
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCC-----eEEEEeecCCCChhhhhhhh-----hcC-CCHHHHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTP-----QILTMEYVPGIKINRIQSLD-----ELG-VDRKRLGRYAVES 445 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~-----~vLVMEyieG~~L~d~~~l~-----~~g-~d~~~la~~lv~~ 445 (766)
..+|.. ++ |.++.-||++ .|++.|.|. .+|.|+.... ..+ +++..+...++.
T Consensus 555 lL~eSD----------~H-----~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~- 617 (903)
T KOG1027|consen 555 LLQESD----------EH-----PNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIAS- 617 (903)
T ss_pred HHHhcc----------CC-----CceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHH-
Confidence 666653 22 3333334443 489999886 4677765432 111 333333333333
Q ss_pred HHHHHHhCCccccCCCCCcEEEeec---CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCC
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDV---NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPT 522 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~---~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~ 522 (766)
.+.++|.-+++|||+||.||||... ...+++|.|||++++++... ..+.. .+-..+....++++++........
T Consensus 618 GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~-sS~~r--~s~~sGt~GW~APE~L~~~~~~~a 694 (903)
T KOG1027|consen 618 GLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK-SSFSR--LSGGSGTSGWQAPEQLREDRKTQA 694 (903)
T ss_pred HHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc-chhhc--ccCCCCcccccCHHHHhccccCcc
Confidence 5788999999999999999999852 22468999999999997754 33443 344578899999999998887778
Q ss_pred CCHHHHHHHHHHHH
Q 004234 523 GDTTAVRRTAQFFL 536 (766)
Q Consensus 523 ~D~~~l~~~i~~~l 536 (766)
.|+.++...+++.+
T Consensus 695 vDiFslGCvfyYvl 708 (903)
T KOG1027|consen 695 VDIFSLGCVFYYVL 708 (903)
T ss_pred cchhhcCceEEEEe
Confidence 88888876654433
No 417
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.87 E-value=4.8e-08 Score=104.36 Aligned_cols=104 Identities=14% Similarity=0.013 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHhcCCCCcccccee--eecc-----CCCeEEEEeecCCC-Chhhhhhhh-hcCCCH---HHHHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTI--FWEY-----TTPQILTMEYVPGI-KINRIQSLD-ELGVDR---KRLGRYAV 443 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v--~~e~-----st~~vLVMEyieG~-~L~d~~~l~-~~g~d~---~~la~~lv 443 (766)
.+.+|.+++.++.+ .+|.+|.+ |.+. ..+.+||||+++|. ++.++...- ....+. ..+... +
T Consensus 74 ~a~rE~~~l~~L~~-----~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~-l 147 (268)
T PRK15123 74 GADREWRAIHRLHE-----VGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKR-V 147 (268)
T ss_pred HHHHHHHHHHHHHH-----cCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHH-H
Confidence 36678889998876 35777777 4322 23478999999996 788764311 111111 122222 4
Q ss_pred HHHHHHHHhCCccccCCCCCcEEEee-----cCCCcEEEEeecceec
Q 004234 444 ESYLEQILSHGFFHADPHPGNIAVDD-----VNGGRLIFYDFGMMGS 485 (766)
Q Consensus 444 ~~~l~qI~~~GffHaDpHPGNILV~~-----~~~g~l~LiDFGlv~~ 485 (766)
..++.++|..|++|+|++|+|||++. .+++++.+|||+.+..
T Consensus 148 a~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 148 ATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 45678899999999999999999974 1246899999998853
No 418
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.85 E-value=1.8e-08 Score=101.91 Aligned_cols=146 Identities=19% Similarity=0.256 Sum_probs=89.8
Q ss_pred CcccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+-+|++.|..++||+.+. +|+.+++|+.+++-... ...
T Consensus 2 ~~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~-----------------------------------------~~~ 40 (223)
T cd05154 2 EVRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP-----------------------------------------SAH 40 (223)
T ss_pred cceecCCCccceEEEEEecCCcceEEEeCCCcccCc-----------------------------------------ccc
Confidence 347899999999999998 46999999864432100 011
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccCC-----CeEEEEeecCCCChhhhhh---h---------h---------
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYTT-----PQILTMEYVPGIKINRIQS---L---------D--------- 429 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st-----~~vLVMEyieG~~L~d~~~---l---------~--------- 429 (766)
++..|++.+..+++. .+.+|+++.-... ..+++|||++|.++.+... + .
T Consensus 41 ~~~~E~~~~~~l~~~-----~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~l 115 (223)
T cd05154 41 DVAREYRVLRALAGT-----GVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAAL 115 (223)
T ss_pred cHHHHHHHHHHhhCC-----CCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456677777776542 4668887764433 4589999999998876321 0 0
Q ss_pred -hc-----CC---C------HHHHHHH-------------HHHHHHHHH-------HhCCccccCCCCCcEEEeecCCCc
Q 004234 430 -EL-----GV---D------RKRLGRY-------------AVESYLEQI-------LSHGFFHADPHPGNIAVDDVNGGR 474 (766)
Q Consensus 430 -~~-----g~---d------~~~la~~-------------lv~~~l~qI-------~~~GffHaDpHPGNILV~~~~~g~ 474 (766)
.. +. . ...+... .+...++.+ ...+++|+|+||+||++++..++.
T Consensus 116 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~ 195 (223)
T cd05154 116 HSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRV 195 (223)
T ss_pred hCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcE
Confidence 00 00 0 0000000 001111111 136789999999999997411356
Q ss_pred EEEEeecceeccCh
Q 004234 475 LIFYDFGMMGSISP 488 (766)
Q Consensus 475 l~LiDFGlv~~L~~ 488 (766)
+.++||+.++.-++
T Consensus 196 ~~iID~e~~~~g~~ 209 (223)
T cd05154 196 VAVLDWELATLGDP 209 (223)
T ss_pred EEEEeccccccCCh
Confidence 88999999987655
No 419
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.82 E-value=7.7e-09 Score=120.49 Aligned_cols=185 Identities=13% Similarity=0.105 Sum_probs=128.0
Q ss_pred cccccccceeEEEEEee--cCe----eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARL--KGE----EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVL 371 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l--~G~----~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l 371 (766)
...||+|.||.||+|.+ +|+ +|||||..-.-...
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~---------------------------------------- 740 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPK---------------------------------------- 740 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCch----------------------------------------
Confidence 35799999999999999 564 78999873211100
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcc-ccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHH
Q 004234 372 YQEIDYTQEAANAELFASNFKDMDYV-KVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLE 448 (766)
Q Consensus 372 ~~ElDf~~EA~Nl~~f~~~f~~~~~V-~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~ 448 (766)
.-..+..||-+|.++. ++++ ++-. + ..++...||++|++++.|.|+.+..+..+-.+.+.....+. .++
T Consensus 741 -~s~e~LdeAl~masld-----Hpnl~RLLg-v-c~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~ 812 (1177)
T KOG1025|consen 741 -ASIELLDEALRMASLD-----HPNLLRLLG-V-CMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMK 812 (1177)
T ss_pred -hhHHHHHHHHHHhcCC-----CchHHHHhh-h-cccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHH
Confidence 0012344454444431 1221 1111 1 12344789999999999999877666666666666655443 477
Q ss_pred HHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAV 528 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l 528 (766)
.+++++++|||+-..|+||.. ...+++.|||++.-+.++..+.-+. ...--+..|+=+.+.....+...|++++
T Consensus 813 YLe~qrlVHrdLaaRNVLVks--P~hvkitdfgla~ll~~d~~ey~~~----~gK~pikwmale~i~~~~~thqSDVWsf 886 (1177)
T KOG1025|consen 813 YLEEQRLVHRDLAARNVLVKS--PNHVKITDFGLAKLLAPDEKEYSAP----GGKVPIKWMALESIRIRKYTHQSDVWSF 886 (1177)
T ss_pred HHHhcchhhhhhhhhheeecC--CCeEEEEecchhhccCccccccccc----ccccCcHHHHHHHhhccCCCchhhhhhh
Confidence 888999999999999999986 6789999999999998876654322 2233456677777778888999999999
Q ss_pred HHHHHHHH
Q 004234 529 RRTAQFFL 536 (766)
Q Consensus 529 ~~~i~~~l 536 (766)
...+=+++
T Consensus 887 GVtiWElm 894 (1177)
T KOG1025|consen 887 GVTIWELM 894 (1177)
T ss_pred hhhHHHHH
Confidence 98775554
No 420
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.79 E-value=1.7e-09 Score=111.46 Aligned_cols=188 Identities=18% Similarity=0.225 Sum_probs=119.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
+.||.|.|..|+|+.. +|+..|+|+.. ++ ++-. .++. +
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin----------~~------k~~~----------~~~e--------------~ 56 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIIN----------TK------KLSA----------RDFQ--------------K 56 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhh----------hh------hhcc----------ccHH--------------H
Confidence 3588999999999988 69999988761 11 1100 0111 2
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhh-hhhh-hhcCCCHHHHHHHHHHHHHHHHHhCC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINR-IQSL-DELGVDRKRLGRYAVESYLEQILSHG 454 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d-~~~l-~~~g~d~~~la~~lv~~~l~qI~~~G 454 (766)
+.+||+ ..+++++..-+..-+.|.+ .+-++||.|+++|..|-. +.+- --...+.....+.+++ .+...|..|
T Consensus 57 l~rEar----IC~~LqHP~IvrL~~ti~~-~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLe-al~yCH~n~ 130 (355)
T KOG0033|consen 57 LEREAR----ICRKLQHPNIVRLHDSIQE-ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE-ALAYCHSNG 130 (355)
T ss_pred HHHHHH----HHHhcCCCcEeehhhhhcc-cceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcC
Confidence 334554 3444555433444333322 345799999999998764 2110 0000111122222222 245567899
Q ss_pred ccccCCCCCcEEEeecCC-CcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Q 004234 455 FFHADPHPGNIAVDDVNG-GRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQ 533 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~-g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~ 533 (766)
++|+|++|.|+++..... ..++|.|||++..++... ++.+ ..+.+.+|+++..+-.-.....|+++-...+.
T Consensus 131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~------~~~G-~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLf 203 (355)
T KOG0033|consen 131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE------AWHG-FAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 203 (355)
T ss_pred ceeccCChhheeeeeccCCCceeecccceEEEeCCcc------cccc-ccCCCcccCHHHhhcCCCCCcchhhhhhHHHH
Confidence 999999999999975333 369999999999998422 1222 35799999999999988888999999887776
Q ss_pred HHHHHH
Q 004234 534 FFLNSF 539 (766)
Q Consensus 534 ~~l~~~ 539 (766)
.++..|
T Consensus 204 iLL~G~ 209 (355)
T KOG0033|consen 204 ILLVGY 209 (355)
T ss_pred HHHhCC
Confidence 666544
No 421
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.78 E-value=2.7e-08 Score=114.17 Aligned_cols=176 Identities=15% Similarity=0.135 Sum_probs=116.8
Q ss_pred ccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
-.+|.|.+|.||.|++. ....|||-.. +. -+++..-+.+|+.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIp----ek--------------------------------dsr~~QPLhEEIa 624 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIP----EK--------------------------------DSREVQPLHEEIA 624 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecc----cc--------------------------------cchhhccHHHHHH
Confidence 47999999999999993 5567888441 11 0112233455665
Q ss_pred HHHHH--HHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCC--CHHHHHH--HHHHHHHHHH
Q 004234 377 YTQEA--ANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGV--DRKRLGR--YAVESYLEQI 450 (766)
Q Consensus 377 f~~EA--~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~--d~~~la~--~lv~~~l~qI 450 (766)
+.... +|+.++-..+... +-.-+.||-++|++|+++..-.-..+ +...+.- .-+-..++.+
T Consensus 625 LH~~LrHkNIVrYLGs~sen-------------Gf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYL 691 (1226)
T KOG4279|consen 625 LHSTLRHKNIVRYLGSVSEN-------------GFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYL 691 (1226)
T ss_pred HHHHHhhHhHHHHhhccCCC-------------CeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhh
Confidence 55444 4777776654432 23458899999999999865432222 2222222 2233447888
Q ss_pred HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCC--CCCCCHHHH
Q 004234 451 LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVL--VPTGDTTAV 528 (766)
Q Consensus 451 ~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~--~~~~D~~~l 528 (766)
|+..++|||+|-.|++|+. -.|-+++.|||-++++..- ....+. +.++..+|++++++-|.- .+..|+++|
T Consensus 692 Hen~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAgi--nP~TET----FTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 692 HENKIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGI--NPCTET----FTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred hhcceeeccccCCcEEEee-ccceEEecccccchhhccC--Cccccc----cccchhhhChHhhccCCcCCCchhhhhhc
Confidence 9999999999999999985 4689999999999887431 112222 356888999999998742 334566666
Q ss_pred HH
Q 004234 529 RR 530 (766)
Q Consensus 529 ~~ 530 (766)
.-
T Consensus 765 GC 766 (1226)
T KOG4279|consen 765 GC 766 (1226)
T ss_pred cc
Confidence 53
No 422
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.78 E-value=4.7e-09 Score=117.01 Aligned_cols=145 Identities=19% Similarity=0.184 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCC--HHHHHHHHHH
Q 004234 369 SVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD--RKRLGRYAVE 444 (766)
Q Consensus 369 ~~l~~ElDf~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d--~~~la~~lv~ 444 (766)
+.+..|-+.+.|.+ -+.++++-|++..+ .|+.||-|=|+.|+.+..-+. .+| ..+.....+-
T Consensus 465 eHv~sEr~Im~~~~s~fIvrLYrTfrd~ky-------------vYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~ 530 (732)
T KOG0614|consen 465 EHVFSERNIMMECRSDFIVRLYRTFRDSKY-------------VYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVL 530 (732)
T ss_pred HHHHhHHHHHHhcCchHHHHHHHHhccchh-------------hhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHH
Confidence 34445555555554 46677777776443 368999999999998754322 222 3344444455
Q ss_pred HHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCC
Q 004234 445 SYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGD 524 (766)
Q Consensus 445 ~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D 524 (766)
..+..+|++||+.||+||.|++++. +|-++|.|||.++.+....+.. .+.++++|++++++-..-.....|
T Consensus 531 EAfeYLH~k~iIYRDLKPENllLd~--~Gy~KLVDFGFAKki~~g~KTw-------TFcGTpEYVAPEIILnKGHD~avD 601 (732)
T KOG0614|consen 531 EAFEYLHRKGIIYRDLKPENLLLDN--RGYLKLVDFGFAKKIGSGRKTW-------TFCGTPEYVAPEIILNKGHDRAVD 601 (732)
T ss_pred HHHHHHHhcCceeccCChhheeecc--CCceEEeehhhHHHhccCCcee-------eecCCcccccchhhhccCcchhhH
Confidence 5688999999999999999999986 8999999999999997765532 245799999999986655666778
Q ss_pred HHHHHHHHHHHH
Q 004234 525 TTAVRRTAQFFL 536 (766)
Q Consensus 525 ~~~l~~~i~~~l 536 (766)
.+++.-.+++++
T Consensus 602 yWaLGIli~ELL 613 (732)
T KOG0614|consen 602 YWALGILIYELL 613 (732)
T ss_pred HHHHHHHHHHHH
Confidence 888887666655
No 423
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.70 E-value=9.4e-08 Score=105.17 Aligned_cols=189 Identities=15% Similarity=0.173 Sum_probs=109.0
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHH-HHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYD-ECASVLYQEI 375 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~-E~~~~l~~El 375 (766)
.-+|.|+|..||+|.+ ..+.|||||-.-+ -+|.+=-. ..-+...+|-
T Consensus 469 hLLGrGGFSEVyKAFDl~EqRYvAvKIHqlN------------------------------K~WrdEKKeNYhKHAcREy 518 (775)
T KOG1151|consen 469 HLLGRGGFSEVYKAFDLTEQRYVAVKIHQLN------------------------------KNWRDEKKENYHKHACREY 518 (775)
T ss_pred HHhccccHHHHHHhcccchhheeeEeeehhc------------------------------cchhhHhhhhHHHHHHHHH
Confidence 3589999999999998 5899999986211 13332111 1111222222
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeecc---CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH---HHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEY---TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES---YLEQ 449 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~---st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~---~l~q 449 (766)
+. . +...+-+|.+.|.-+ +...+-|.|||+|-.|+-+.. +...--..-++.++-. .|..
T Consensus 519 rI----------H---KeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 519 RI----------H---KELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKY 583 (775)
T ss_pred hh----------h---hccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHH
Confidence 22 1 222223444555433 345689999999998876543 2211111222222221 1333
Q ss_pred HH--hCCccccCCCCCcEEEeec-CCCcEEEEeecceeccChhhHHHHHHH-HHHHhhcCHHHHHHHHHHcCCCCC----
Q 004234 450 IL--SHGFFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEA-FYGIYEKDADKVLQAMVQMGVLVP---- 521 (766)
Q Consensus 450 I~--~~GffHaDpHPGNILV~~~-~~g~l~LiDFGlv~~L~~~~r~~l~~l-~~a~~~~D~~~v~~~l~~lG~~~~---- 521 (766)
+- ...++|-|+||||||+... .-|.|++.|||+...++++.-.....+ +.+-..+++.++.++..-.|--+|
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsn 663 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISN 663 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCcccc
Confidence 32 4579999999999998641 236899999999999877543322111 122235788888887665553333
Q ss_pred CCCHHHHHHHH
Q 004234 522 TGDTTAVRRTA 532 (766)
Q Consensus 522 ~~D~~~l~~~i 532 (766)
..|++++....
T Consensus 664 KVDVWSvGVIF 674 (775)
T KOG1151|consen 664 KVDVWSVGVIF 674 (775)
T ss_pred ceeeEeeehhh
Confidence 35777776543
No 424
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=98.70 E-value=4.7e-08 Score=110.65 Aligned_cols=184 Identities=20% Similarity=0.210 Sum_probs=112.6
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.|+|+|.||||..|.+ +...|+||.+. ++.|-.|-++ . .+ ++-.+--|+. =+.
T Consensus 567 q~lG~GAyGkV~lai~K~n~~eVViK~I~---KeRIL~DtWv--------r--Dr-------kLGtVp~EIq-----Ila 621 (772)
T KOG1152|consen 567 QPLGEGAYGKVNLAIHKENNYEVVIKMIF---KERILVDTWV--------R--DR-------KLGTVPSEIQ-----ILA 621 (772)
T ss_pred eeccccccceEEEeeecccceEEEeeehh---hhhhhhhhhh--------c--cc-------ccCccchhHH-----HHH
Confidence 7999999999999999 47899999772 2233222211 1 11 1111111211 011
Q ss_pred HHH--HHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEee-cCCCChhhhhhhhhcCCC--HHHHHHHHHHHHHHHHH
Q 004234 377 YTQ--EAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEY-VPGIKINRIQSLDELGVD--RKRLGRYAVESYLEQIL 451 (766)
Q Consensus 377 f~~--EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEy-ieG~~L~d~~~l~~~g~d--~~~la~~lv~~~l~qI~ 451 (766)
+.+ -..|+.++-..|.++. .-+|+||- =+|+.|-|+...... ++ ...+.-.-+.+..+++|
T Consensus 622 ~l~~~sH~NIlKlLdfFEddd-------------~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh 687 (772)
T KOG1152|consen 622 TLNKHSHENILKLLDFFEDDD-------------YYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLH 687 (772)
T ss_pred HhhhcCccchhhhhheeecCC-------------eeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcccccc
Confidence 111 1236666666665543 34677874 457777776554322 22 22233333445567789
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVRR 530 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~~ 530 (766)
.+|++|||+|-+|+.++. +|-++|||||.+......- .+. ..++.++++++++.- .+.....|++++.-
T Consensus 688 ~~~ivhrdikdenvivd~--~g~~klidfgsaa~~ksgp----fd~----f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 688 DQGIVHRDIKDENVIVDS--NGFVKLIDFGSAAYTKSGP----FDV----FVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ccCceecccccccEEEec--CCeEEEeeccchhhhcCCC----cce----eeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 999999999999999986 8999999999887653321 222 346788899988763 23344568888764
Q ss_pred H
Q 004234 531 T 531 (766)
Q Consensus 531 ~ 531 (766)
.
T Consensus 758 l 758 (772)
T KOG1152|consen 758 L 758 (772)
T ss_pred e
Confidence 3
No 425
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.70 E-value=6.1e-09 Score=119.30 Aligned_cols=173 Identities=21% Similarity=0.257 Sum_probs=110.3
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.-+|||++|-||||+. +|+.+|||+.+=...+. +. .+.+|+-
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd----------------------------~~--------~iqqei~ 64 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD----------------------------FS--------GIQQEIG 64 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCcc----------------------------cc--------cccccee
Confidence 4699999999999999 69999999984222111 11 1112222
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeecc--CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHh
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEY--TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILS 452 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~--st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~ 452 (766)
..+|.+ +-.+|..+..| -.+.+++||||.|+++.|+.... ..+...+++...-+. -++.+|.
T Consensus 65 ~~~dc~-------------h~nivay~gsylr~dklwicMEycgggslQdiy~~T-gplselqiayvcRetl~gl~ylhs 130 (829)
T KOG0576|consen 65 MLRDCR-------------HPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYLHS 130 (829)
T ss_pred eeecCC-------------CcChHHHHhhhhhhcCcEEEEEecCCCcccceeeec-ccchhHHHHHHHhhhhccchhhhc
Confidence 222222 11112222212 23569999999999999965432 223444554443333 3788999
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCC---CCCCCCHHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGV---LVPTGDTTAVR 529 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~---~~~~~D~~~l~ 529 (766)
.|-+|||+|-+||++++ .|.+++.|||..++++...-.. .-..+.+..|++++..++. .....|..++.
T Consensus 131 ~gk~hRdiKGanilltd--~gDvklaDfgvsaqitati~Kr------ksfiGtpywmapEvaaverkggynqlcdiwa~g 202 (829)
T KOG0576|consen 131 QGKIHRDIKGANILLTD--EGDVKLADFGVSAQITATIAKR------KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG 202 (829)
T ss_pred CCcccccccccceeecc--cCceeecccCchhhhhhhhhhh------hcccCCccccchhHHHHHhcccccccccccccc
Confidence 99999999999999997 8999999999999987542211 1124577777777766543 33445666555
No 426
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.69 E-value=1.2e-08 Score=107.83 Aligned_cols=187 Identities=14% Similarity=0.098 Sum_probs=122.1
Q ss_pred CcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHH
Q 004234 297 DVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQE 374 (766)
Q Consensus 297 d~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~E 374 (766)
+.+.||.|--|.|-.+.. +|+..|+||.+---+. ++|
T Consensus 66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KA-----------------------------------------RrE 104 (400)
T KOG0604|consen 66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKA-----------------------------------------RRE 104 (400)
T ss_pred hhhhhccccCCceEEEEeccchhhhHHHHHhcCHHH-----------------------------------------HhH
Confidence 447899999999999988 5999999987321111 122
Q ss_pred HHHHHHHHHHHHHHHhcCCCCccccceeeecc-CC--CeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHHH--HHHHHH
Q 004234 375 IDYTQEAANAELFASNFKDMDYVKVPTIFWEY-TT--PQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRYA--VESYLE 448 (766)
Q Consensus 375 lDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-st--~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~l--v~~~l~ 448 (766)
+++.--+ -.+..-|.|-.||... .. -..+|||.++|+.|-....... ..+..++.++.. +...+.
T Consensus 105 VeLHw~~---------s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~ 175 (400)
T KOG0604|consen 105 VELHWMA---------SGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVR 175 (400)
T ss_pred hhhhhhh---------cCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHH
Confidence 2221111 0111224455555432 12 2378999999999877443222 224444444433 334578
Q ss_pred HHHhCCccccCCCCCcEEEeec-CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHH
Q 004234 449 QILSHGFFHADPHPGNIAVDDV-NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTA 527 (766)
Q Consensus 449 qI~~~GffHaDpHPGNILV~~~-~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~ 527 (766)
.+|..+|-|||+||+|+|+... ++-.++|.|||.++.-... +.. -.-.-++.|++++.+.-.-.....|+++
T Consensus 176 ~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~---~~L----~TPc~TPyYvaPevlg~eKydkscdmwS 248 (400)
T KOG0604|consen 176 YLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP---GDL----MTPCFTPYYVAPEVLGPEKYDKSCDMWS 248 (400)
T ss_pred HHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC---ccc----cCCcccccccCHHHhCchhcCCCCCccc
Confidence 8999999999999999999752 2346999999999875431 111 1123478888998877666667789999
Q ss_pred HHHHHHHHHHHHH
Q 004234 528 VRRTAQFFLNSFE 540 (766)
Q Consensus 528 l~~~i~~~l~~~~ 540 (766)
+...++.++-.|.
T Consensus 249 lgVimYIlLCGyP 261 (400)
T KOG0604|consen 249 LGVIMYILLCGYP 261 (400)
T ss_pred hhHHHHHhhcCCC
Confidence 9999998887764
No 427
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=98.64 E-value=1.1e-07 Score=108.48 Aligned_cols=183 Identities=19% Similarity=0.181 Sum_probs=122.0
Q ss_pred ccccccceeEEEEEee----cCe--eEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL----KGE--EVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLY 372 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l----~G~--~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~ 372 (766)
..||.|-||-||+|+. +|+ .||||.=+.+.... +
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d------------------------------~---------- 434 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD------------------------------D---------- 434 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChh------------------------------h----------
Confidence 4699999999999998 244 57888653322111 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHH
Q 004234 373 QEIDYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQ 449 (766)
Q Consensus 373 ~ElDf~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~q 449 (766)
.| .|..||--|+.|. +|+ |..--+.. ....++|||.++-+.|..+....+..++...+.-...+ ..+..
T Consensus 435 te-kflqEa~iMrnfd-----HphIikLIGv~~--e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaY 506 (974)
T KOG4257|consen 435 TE-KFLQEASIMRNFD-----HPHIIKLIGVCV--EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAY 506 (974)
T ss_pred HH-HHHHHHHHHHhCC-----Ccchhheeeeee--ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence 11 5778887776652 233 22222221 24679999999999999887655555554444333322 34677
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVR 529 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~ 529 (766)
+....|+|||+-..||||.. ...++|.|||+.+.++++.-..-. ...--...|+++-+..-..+..+|++-|.
T Consensus 507 LeSkrfVHRDIAaRNiLVsS--p~CVKLaDFGLSR~~ed~~yYkaS-----~~kLPIKWmaPESINfRrFTtASDVWMFg 579 (974)
T KOG4257|consen 507 LESKRFVHRDIAARNILVSS--PQCVKLADFGLSRYLEDDAYYKAS-----RGKLPIKWMAPESINFRRFTTASDVWMFG 579 (974)
T ss_pred HHhhchhhhhhhhhheeecC--cceeeecccchhhhccccchhhcc-----ccccceeecCccccchhcccchhhHHHHH
Confidence 88999999999999999985 567999999999999876432111 11224556777777776677777888777
Q ss_pred HHHHHHH
Q 004234 530 RTAQFFL 536 (766)
Q Consensus 530 ~~i~~~l 536 (766)
.-+-+++
T Consensus 580 VCmWEIl 586 (974)
T KOG4257|consen 580 VCMWEIL 586 (974)
T ss_pred HHHHHHH
Confidence 6554444
No 428
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=98.64 E-value=2.4e-08 Score=106.08 Aligned_cols=197 Identities=17% Similarity=0.186 Sum_probs=111.6
Q ss_pred hhhhhhccCcccccccceeEEEEEee-c--C---eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004234 289 LDDVFERFDVEPIAAASLGQVHRARL-K--G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (766)
Q Consensus 289 ~eeiF~~fd~~PIgsaSiGQVhrA~l-~--G---~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~ 362 (766)
++++|.+-...-||+|.+|.||+|+- + + .++|||..+- .. |
T Consensus 20 ve~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~-------------------------~k-----d--- 66 (438)
T KOG0666|consen 20 VEDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKG-------------------------EK-----D--- 66 (438)
T ss_pred HHHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhc-------------------------cC-----C---
Confidence 34555443446799999999999976 2 2 2456653211 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhc----CCCHH
Q 004234 363 IYDECASVLYQEIDYTQEAA--NAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDEL----GVDRK 436 (766)
Q Consensus 363 i~~E~~~~l~~ElDf~~EA~--Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~----g~d~~ 436 (766)
.+-++.+.-+|+-+.+|.+ |+..+ .+|+-......+|+.||.+- .|..++..-.. .+.+.
T Consensus 67 -~tGiS~SAcREiaL~REl~h~nvi~L------------v~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~ 132 (438)
T KOG0666|consen 67 -GTGISMSACREIALLRELKHPNVISL------------VKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRS 132 (438)
T ss_pred -CCCcCHHHHHHHHHHHHhcCCcchhH------------HHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHH
Confidence 0112334456777777765 34333 33444444567899999885 45554432211 22222
Q ss_pred HHHHHHHHH--HHHHHHhCCccccCCCCCcEEEee--cCCCcEEEEeecceeccChhhHHHH--HHHHHHHhhcCHHHHH
Q 004234 437 RLGRYAVES--YLEQILSHGFFHADPHPGNIAVDD--VNGGRLIFYDFGMMGSISPNIREGL--LEAFYGIYEKDADKVL 510 (766)
Q Consensus 437 ~la~~lv~~--~l~qI~~~GffHaDpHPGNILV~~--~~~g~l~LiDFGlv~~L~~~~r~~l--~~l~~a~~~~D~~~v~ 510 (766)
-+-..+.+. .++.+|..=++|||+||.||+|.. ++.|++++.|+|+++.+.....-.+ -..++.+..+ +.
T Consensus 133 mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR----AP 208 (438)
T KOG0666|consen 133 MVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR----AP 208 (438)
T ss_pred HHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEec----Ch
Confidence 222222222 245567788999999999999985 1238999999999987654332110 0011111112 22
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 511 QAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 511 ~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+.++..--.++..|++++.....+++
T Consensus 209 ELLLGa~hYT~AiDvWAiGCIfaElL 234 (438)
T KOG0666|consen 209 ELLLGARHYTKAIDVWAIGCIFAELL 234 (438)
T ss_pred HHhcccccccchhhhHHHHHHHHHHH
Confidence 33334444577789999887665554
No 429
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=98.62 E-value=1.5e-07 Score=97.65 Aligned_cols=128 Identities=13% Similarity=0.075 Sum_probs=83.5
Q ss_pred CCCeEEEEeecCCCChhhhhhh-h--hcCCCHHHHHHHHHH--HHHHHHHhCC--ccccCCCCCcEEEeecCCCcEEEEe
Q 004234 407 TTPQILTMEYVPGIKINRIQSL-D--ELGVDRKRLGRYAVE--SYLEQILSHG--FFHADPHPGNIAVDDVNGGRLIFYD 479 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l-~--~~g~d~~~la~~lv~--~~l~qI~~~G--ffHaDpHPGNILV~~~~~g~l~LiD 479 (766)
+...+|+..|..-+++.|.... . +.-++..++...... ..++++|+.. +.|+|+||+||++.+ ++.+++.|
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~vl~D 172 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPVLMD 172 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceEEEe
Confidence 4567999999888888875432 2 223556666655433 4589999988 999999999999986 79999999
Q ss_pred ecceeccChh--hHHHHHHHH-HHHhhcCHHHHHHHHHH---cCCCCCCCCHHHHHHHHHHHH
Q 004234 480 FGMMGSISPN--IREGLLEAF-YGIYEKDADKVLQAMVQ---MGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 480 FGlv~~L~~~--~r~~l~~l~-~a~~~~D~~~v~~~l~~---lG~~~~~~D~~~l~~~i~~~l 536 (766)
||.+...+-. .+....++= .+--+=+..+=+|++.. -..++..+|++++.-.++.++
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 9999875432 122111110 01111122233455544 245667889999998776664
No 430
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.62 E-value=1.2e-07 Score=108.65 Aligned_cols=193 Identities=18% Similarity=0.151 Sum_probs=119.8
Q ss_pred CCChhhhhhccCcccccccceeEEEEEee--cCeeEE---EEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccch
Q 004234 286 GAPLDDVFERFDVEPIAAASLGQVHRARL--KGEEVV---VKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDW 360 (766)
Q Consensus 286 G~~~eeiF~~fd~~PIgsaSiGQVhrA~l--~G~~VA---VKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~ 360 (766)
+.++...|-.|+. .||.|++=.||||.+ +|-+|| ||+. .+.+ +
T Consensus 34 e~~p~gRy~k~~e-vLGrGafKtVYka~De~~giEVAWnqvk~~-------------------d~~q-----------~- 81 (632)
T KOG0584|consen 34 EKDPTGRYLKFDE-VLGRGAFKTVYKAFDEEEGIEVAWNQVKIR-------------------DVTQ-----------S- 81 (632)
T ss_pred ccCCCCceeehhh-hcccccceeeeeccccccchhhHHHHHhHH-------------------Hhhc-----------C-
Confidence 4456667777775 699999999999998 466654 2211 0100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCC--eEEEEeecCCCChhhhhhhhhcCCCHHHH
Q 004234 361 VAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPGIKINRIQSLDELGVDRKRL 438 (766)
Q Consensus 361 ~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~--~vLVMEyieG~~L~d~~~l~~~g~d~~~l 438 (766)
.+....+..|+.++. .+++ ++|.--.-+|.-... ..+++|.+.+++|..+.. +....+.+.+
T Consensus 82 ----~~~leR~~~Ev~lLK----------sL~H-~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~k-k~~~vn~kai 145 (632)
T KOG0584|consen 82 ----PEELERLYSEVHLLK----------SLKH-PNIIRFYDSWVDTDNKTINFITELFTSGTLREYRK-KHRRVNIKAI 145 (632)
T ss_pred ----hHHHHHHHHHHHHHc----------cCCC-CceeeeeeheecCCCceeeeeeecccCCcHHHHHH-HhccCCHHHH
Confidence 111223333333222 2222 222222223332333 589999999999998753 2222344422
Q ss_pred HHHH--HHHHHHHHHhC--CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHH
Q 004234 439 GRYA--VESYLEQILSH--GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMV 514 (766)
Q Consensus 439 a~~l--v~~~l~qI~~~--GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~ 514 (766)
-... +..-|+.+|.+ -++|||+|-.||||+. +.|.++|.|.|++..+....- +-+-++|+.|+++|.
T Consensus 146 k~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~VKIGDLGLAtl~r~s~a--------ksvIGTPEFMAPEmY 216 (632)
T KOG0584|consen 146 KSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEVKIGDLGLATLLRKSHA--------KSVIGTPEFMAPEMY 216 (632)
T ss_pred HHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCceeecchhHHHHhhcccc--------ceeccCccccChHHH
Confidence 2111 11224445543 5999999999999996 689999999999987654432 224579999999999
Q ss_pred HcCCCCCCCCHHHHHHHHHHHH
Q 004234 515 QMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 515 ~lG~~~~~~D~~~l~~~i~~~l 536 (766)
+-++ ....|+|+|.--+-++.
T Consensus 217 EE~Y-nE~VDVYaFGMCmLEMv 237 (632)
T KOG0584|consen 217 EENY-NELVDVYAFGMCMLEMV 237 (632)
T ss_pred hhhc-chhhhhhhhhHHHHHHH
Confidence 9664 67889999987665554
No 431
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.59 E-value=3.4e-07 Score=93.81 Aligned_cols=105 Identities=22% Similarity=0.291 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeeccC------CCeEEEEeecCCC-Chhhhhhhh-hcCC-CHHHHHHHHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEYT------TPQILTMEYVPGI-KINRIQSLD-ELGV-DRKRLGRYAVESY 446 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s------t~~vLVMEyieG~-~L~d~~~l~-~~g~-d~~~la~~lv~~~ 446 (766)
...+|.+|+.++.+ .+|.+|+++.-.. .+.+|+||+++|. +|.++.... .... ....+.. .+..+
T Consensus 57 ra~~E~~~~~~L~~-----~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~-~l~~~ 130 (206)
T PF06293_consen 57 RAKREWRNLQRLRE-----AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLR-ALARL 130 (206)
T ss_pred HHHHHHHHHHHHHH-----cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHH-HHHHH
Confidence 46678888888876 3577777765222 2348999999995 688765321 1111 1223333 34456
Q ss_pred HHHHHhCCccccCCCCCcEEEeecCCC---cEEEEeecceeccCh
Q 004234 447 LEQILSHGFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISP 488 (766)
Q Consensus 447 l~qI~~~GffHaDpHPGNILV~~~~~g---~l~LiDFGlv~~L~~ 488 (766)
+..+|..|++|+|++|+|||++. ++ ++.+|||+-+..-..
T Consensus 131 i~~lH~~gi~H~Dl~~~NILv~~--~~~~~~~~lIDld~~~~~~~ 173 (206)
T PF06293_consen 131 IAKLHDAGIYHGDLNPSNILVDP--DDGQYRFYLIDLDRMRFRPS 173 (206)
T ss_pred HHHHHHCcCCCCCCCcccEEEeC--CCCceeEEEEcchhceeCCC
Confidence 78899999999999999999986 43 799999998876553
No 432
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.54 E-value=7.9e-07 Score=90.97 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=111.9
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
..+|.|++|+||+|... ..+++|+..+...... .....|.
T Consensus 6 ~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~---------------------------------------~~~~~~~ 45 (384)
T COG0515 6 RKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS---------------------------------------KEVERFL 45 (384)
T ss_pred EeecCCCCeEEEEEEec-cEEEEEeechhhccch---------------------------------------hHHHHHH
Confidence 46889999999999998 8899998855433221 0112333
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChhhhhhhhhc--CCCHHHHHHHHHHH--HHHHHHh
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKINRIQSLDEL--GVDRKRLGRYAVES--YLEQILS 452 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~d~~~l~~~--g~d~~~la~~lv~~--~l~qI~~ 452 (766)
+|..-... +.+.+ .+...+..+. ...+++|+|+.|..+.++...... ............+. .+..+|.
T Consensus 46 ~e~~~~~~----~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~ 119 (384)
T COG0515 46 REIQILAS----LNHPP--NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS 119 (384)
T ss_pred HHHHHHHH----ccCCc--ceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33332222 22221 2223322222 225999999999999965432221 23333333332222 2568999
Q ss_pred CCccccCCCCCcEEEeecCCC-cEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc---CCCCCCCCHHHH
Q 004234 453 HGFFHADPHPGNIAVDDVNGG-RLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM---GVLVPTGDTTAV 528 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g-~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l---G~~~~~~D~~~l 528 (766)
.|++|+|++|.||+++. .+ .++++|||++..+.................+...++.++.... +......|.+++
T Consensus 120 ~~~~hrd~kp~nil~~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~ 197 (384)
T COG0515 120 KGIIHRDIKPENILLDR--DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSL 197 (384)
T ss_pred CCeeccCCCHHHeeecC--CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHH
Confidence 99999999999999985 55 7999999999866554322110011222345677777887765 456667788866
Q ss_pred HH
Q 004234 529 RR 530 (766)
Q Consensus 529 ~~ 530 (766)
..
T Consensus 198 g~ 199 (384)
T COG0515 198 GI 199 (384)
T ss_pred HH
Confidence 63
No 433
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.52 E-value=1.3e-06 Score=88.36 Aligned_cols=140 Identities=27% Similarity=0.397 Sum_probs=80.9
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+|++.|..++||+...++..+++|+-++. .. .-...
T Consensus 3 ~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~------------------------------------------~~~~~ 38 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DA------------------------------------------AERLR 38 (239)
T ss_dssp EEEEESSSSEEEEEEETTSEEEEEEESSH--HH------------------------------------------HHHHH
T ss_pred ccCCCCCeeeEEEEEECCcEEEEEEeCCC--CC------------------------------------------HHHHH
Confidence 68999999999999996679999987553 00 11233
Q ss_pred HHHHHHHHHHHhcCCCCccccceeee-----ccCCCeEEEEeecCCCChhh------hh-----------hhhhc--C--
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFW-----EYTTPQILTMEYVPGIKINR------IQ-----------SLDEL--G-- 432 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~-----e~st~~vLVMEyieG~~L~d------~~-----------~l~~~--g-- 432 (766)
.|+..+..+.+. .+.+|+++. ......+++|+|++|.++.+ .. .+... .
T Consensus 39 ~e~~~~~~l~~~-----~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~ 113 (239)
T PF01636_consen 39 REAAVLRQLAEH-----GIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFS 113 (239)
T ss_dssp HHHHHHHHHHHT-----TSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCC
T ss_pred HHHHHHHHHHhc-----CCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhccccccccc
Confidence 455555555542 236888887 22334689999999998887 00 00000 0
Q ss_pred -CC--H--------H------------------HHHHHHHHHHHHHHH---hCCccccCCCCCcEEEeecCCCcEEEEee
Q 004234 433 -VD--R--------K------------------RLGRYAVESYLEQIL---SHGFFHADPHPGNIAVDDVNGGRLIFYDF 480 (766)
Q Consensus 433 -~d--~--------~------------------~la~~lv~~~l~qI~---~~GffHaDpHPGNILV~~~~~g~l~LiDF 480 (766)
.. . . .+...+++.+..... ..+++|+|+||+||++++ .++++.++||
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~-~~~~i~iID~ 192 (239)
T PF01636_consen 114 PFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDP-SDGRIGIIDF 192 (239)
T ss_dssp CHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEES-STTEEEE--G
T ss_pred ccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhccCCCcEEEEeccccccceeee-ccceeEEEec
Confidence 00 0 0 000001111111221 356999999999999983 3677889999
Q ss_pred cceeccCh
Q 004234 481 GMMGSISP 488 (766)
Q Consensus 481 Glv~~L~~ 488 (766)
+.++.-++
T Consensus 193 e~a~~~~~ 200 (239)
T PF01636_consen 193 EDAGWGDP 200 (239)
T ss_dssp TT-EEEET
T ss_pred ccceECCH
Confidence 99887654
No 434
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.51 E-value=1.9e-08 Score=104.20 Aligned_cols=186 Identities=15% Similarity=0.190 Sum_probs=104.8
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|+|.||.|++|+. .|+.||+|.. +++. +..+ + -..-.+|++
T Consensus 23 ~kigqGtfgeVFkAr~~n~~kkvalkkv--------------------lmen---eKeG--f---------pitalreik 68 (376)
T KOG0669|consen 23 AKIGQGTFGEVFKARSKNTGKKVALKKV--------------------LMEN---EKEG--F---------PITALREIK 68 (376)
T ss_pred HhcCCchHHHHHHHhhcCccchhHHHHH--------------------HHhc---cccC--C---------cHHHHHHHH
Confidence 4699999999999998 4888998854 1110 0001 1 112223444
Q ss_pred HHHH-----HHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHH--HHHHHHHH
Q 004234 377 YTQE-----AANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRY--AVESYLEQ 449 (766)
Q Consensus 377 f~~E-----A~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~--lv~~~l~q 449 (766)
...- ..|+..+.+.+... .. .+....+|||.+|+. .|.-+.......+....|-.. .+-..+..
T Consensus 69 iL~~lkHenv~nliEic~tk~Tp-~~-------r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~ 139 (376)
T KOG0669|consen 69 ILQLLKHENVVNLIEICRTKATP-TN-------RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYY 139 (376)
T ss_pred HHHHhcchhHHHHHHHHhhccCC-cc-------cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHH
Confidence 4332 12444444433321 11 123447999999974 222222222222333333322 23345788
Q ss_pred HHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhH---HHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHH
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIR---EGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTT 526 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r---~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~ 526 (766)
||+..++|||+||.|++|+. +|.++|.|||+++.++.... ..|..-++.+..+.++.+ +.-.-..+..|++
T Consensus 140 iHr~kilHRDmKaaNvLIt~--dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEll----LG~r~yg~~iDiW 213 (376)
T KOG0669|consen 140 IHRNKILHRDMKAANVLITK--DGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELL----LGDREYGPPIDIW 213 (376)
T ss_pred HHHhhHHhhcccHhhEEEcC--CceEEeeccccccceecccccCCCCcccceeeeecCCHHHh----hcccccCCcchhH
Confidence 99999999999999999986 89999999999987754321 113333333333444332 1122234667877
Q ss_pred HHHHHHH
Q 004234 527 AVRRTAQ 533 (766)
Q Consensus 527 ~l~~~i~ 533 (766)
.-.-.+.
T Consensus 214 gAgCima 220 (376)
T KOG0669|consen 214 GAGCIMA 220 (376)
T ss_pred hHHHHHH
Confidence 6655443
No 435
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.50 E-value=5.9e-08 Score=103.59 Aligned_cols=129 Identities=18% Similarity=0.214 Sum_probs=89.1
Q ss_pred cccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCccccCCCCCcEEEeecCCCc
Q 004234 397 VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHADPHPGNIAVDDVNGGR 474 (766)
Q Consensus 397 V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~GffHaDpHPGNILV~~~~~g~ 474 (766)
+..|.-..+.-.+.++|||++++ .+..+.. ...|.+.+.....+. ..+.+|..|++|||+||.||++.. ++.
T Consensus 83 ~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~ 156 (369)
T KOG0665|consen 83 VFTPQKTLEEFQEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCT 156 (369)
T ss_pred ccCccccHHHHHhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhh
Confidence 44454444444567999999986 3444433 345666666555553 478899999999999999999986 889
Q ss_pred EEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Q 004234 475 LIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNS 538 (766)
Q Consensus 475 l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~ 538 (766)
++++|||++..-+..++. ... +..-+..+.+..+.+| ..+..|++++.-.+-+++..
T Consensus 157 lKi~dfg~ar~e~~~~~m--tpy----VvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~ 213 (369)
T KOG0665|consen 157 LKILDFGLARTEDTDFMM--TPY----VVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILG 213 (369)
T ss_pred eeeccchhhcccCccccc--Cch----hheeeccCchheeccC-CcccchhhhhhhHHHHHhhc
Confidence 999999999987665321 111 1122344556777888 67788999988776666543
No 436
>PRK10593 hypothetical protein; Provisional
Probab=98.48 E-value=6.3e-06 Score=89.37 Aligned_cols=94 Identities=20% Similarity=0.222 Sum_probs=66.1
Q ss_pred HHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCC
Q 004234 275 ETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSD 354 (766)
Q Consensus 275 ~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~ 354 (766)
+.+++.+.+.+|..+. +.++|+.|.+++||+....+..+++|+.+.....
T Consensus 2 ~~~~~~~~~~~~~~~~------~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~------------------------ 51 (297)
T PRK10593 2 EQLRAELSHLLGEKLS------RVECISEQPYAALWALYDSQGNPMPLMARSFSTP------------------------ 51 (297)
T ss_pred hHHHHHHHHHhchhhh------eeeecCCccceeEEEEEcCCCCEEEEEecccccc------------------------
Confidence 3456667777775433 2379999999999999885446888986321110
Q ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeecc-----CCCeEEEEeecCCCCh
Q 004234 355 GAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY-----TTPQILTMEYVPGIKI 422 (766)
Q Consensus 355 ~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~-----st~~vLVMEyieG~~L 422 (766)
-.|..|+.++..+++. ..|.||+|+... .+..+|||||++|.++
T Consensus 52 --------------------~~~~~Ea~~L~~L~~~----~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 52 --------------------GVAQQEAWKLSMLARS----GTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred --------------------hHHHHHHHHHHHHccC----CCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 1456788888887642 358999999622 3568999999999876
No 437
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=98.46 E-value=2.5e-07 Score=105.17 Aligned_cols=179 Identities=15% Similarity=0.075 Sum_probs=112.4
Q ss_pred ccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
..+|-|.+|.||.|+|+ .-.||||.++.+.-+ -| .
T Consensus 273 hKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe------------------------------------------ve-E 309 (1157)
T KOG4278|consen 273 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME------------------------------------------VE-E 309 (1157)
T ss_pred eccCCCcccceeeeeeeccceeeehhhhhhcchh------------------------------------------HH-H
Confidence 57999999999999993 788999976332110 01 3
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhh-cCCCHHHHHHH--HHHHHHHHHHhC
Q 004234 377 YTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE-LGVDRKRLGRY--AVESYLEQILSH 453 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~-~g~d~~~la~~--lv~~~l~qI~~~ 453 (766)
|+.||.-|..+.+ +++.----+..+.-..|+++|||.-+.|-|+..-.. ..+..--+... .+...+..+-..
T Consensus 310 FLkEAAvMKeikH-----pNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 310 FLKEAAVMKEIKH-----PNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred HHHHHHHHHhhcC-----ccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 5566665554421 111100011112235689999999888888754221 11222222222 233446667789
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
+|+|+|+-..|.||.+ +.-+++.|||+++.++.++... .|-..--+..-+++-+.....+-..|+++|...+
T Consensus 385 nFIHRDLAARNCLVgE--nhiVKvADFGLsRlMtgDTYTA-----HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLL 456 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGE--NHIVKVADFGLSRLMTGDTYTA-----HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLL 456 (1157)
T ss_pred hhhhhhhhhhhccccc--cceEEeeccchhhhhcCCceec-----ccCccCcccccCcccccccccccchhhHHHHHHH
Confidence 9999999999999986 7789999999999988765432 2222333444555555555566678998887644
No 438
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.45 E-value=8.4e-06 Score=84.94 Aligned_cols=164 Identities=22% Similarity=0.260 Sum_probs=93.4
Q ss_pred cccccc-eeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 300 PIAAAS-LGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 300 PIgsaS-iGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||..|. -++||+...++..++||+..+.- .-++.
T Consensus 5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---------------------------------------------~~~~~ 39 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP---------------------------------------------TYELE 39 (244)
T ss_pred ecCCCCCcCeEEEEcCCCCcEEEEecCCCc---------------------------------------------ccchH
Confidence 454544 48999998877899999873321 01234
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCC--CeEEEEeecCCCChhhhhh-----------------hhhc-----CCC
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTT--PQILTMEYVPGIKINRIQS-----------------LDEL-----GVD 434 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st--~~vLVMEyieG~~L~d~~~-----------------l~~~-----g~d 434 (766)
.|++.+..+.+. +.+|+++..... ..+++|||++|.++.+... +... ...
T Consensus 40 ~E~~~l~~l~~~------~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~ 113 (244)
T cd05150 40 REAERLRWLAGK------LPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFD 113 (244)
T ss_pred HHHHHHHHHHhc------CCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcc
Confidence 566666666532 678999864433 4699999999998875310 0000 000
Q ss_pred H---HHHHH--HH-------------------HHHHHHHHH-------hCCccccCCCCCcEEEeecCCCcEEEEeecce
Q 004234 435 R---KRLGR--YA-------------------VESYLEQIL-------SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMM 483 (766)
Q Consensus 435 ~---~~la~--~l-------------------v~~~l~qI~-------~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv 483 (766)
. ..+.. .. ....+..+. ...++|+|+||+||++++ ++.+.+|||+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~--~~~~~iIDwe~a 191 (244)
T cd05150 114 RRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVVTHGDACLPNIIVDP--GKFSGFIDLGRL 191 (244)
T ss_pred hhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEEECCCCCCccEEEeC--CcEEEEEEcccc
Confidence 0 00000 00 111122221 245899999999999985 556789999999
Q ss_pred eccChhhHHHHHHHHHHHhh--cCHHHHHHHHHHcCC
Q 004234 484 GSISPNIREGLLEAFYGIYE--KDADKVLQAMVQMGV 518 (766)
Q Consensus 484 ~~L~~~~r~~l~~l~~a~~~--~D~~~v~~~l~~lG~ 518 (766)
+.-++.. .++-++..... ++.......+...|.
T Consensus 192 ~~gdp~~--Dla~~~~~~~~~~~~~~~~~~f~~~Y~~ 226 (244)
T cd05150 192 GVADRYQ--DLALAVRSLRENLGGEEYAARFLDRYGI 226 (244)
T ss_pred ccccHHH--HHHHHHHHhhhhcCChHHHHHHHHHcCC
Confidence 8655432 23333322221 134445444444554
No 439
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.44 E-value=1.6e-06 Score=90.31 Aligned_cols=136 Identities=18% Similarity=0.214 Sum_probs=81.4
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
+||++|.-+-||+. .|..+++|+.+|+.... +..
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~--------------------------------------------~i~ 40 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGFDKE--------------------------------------------TIK 40 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCCCHH--------------------------------------------HHH
Confidence 79999999999984 36678899886643111 224
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeec--cCCCeEEEEeecCCCC-hhhhh---------------h----hhh---cCC
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWE--YTTPQILTMEYVPGIK-INRIQ---------------S----LDE---LGV 433 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e--~st~~vLVMEyieG~~-L~d~~---------------~----l~~---~g~ 433 (766)
+|++.+..+.+ ..+.+|+++.- .+....++|||++|.+ +.+.. . +.. .+.
T Consensus 41 ~E~~~l~~l~~-----~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~ 115 (226)
T TIGR02172 41 REFDASRKVFS-----LGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTS 115 (226)
T ss_pred HHHHHHHHHHH-----cCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 56666666643 24678888753 4455688999999974 11110 0 000 011
Q ss_pred CHHHHHHH-----------------HHHHHHHHH-HhCCccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 434 DRKRLGRY-----------------AVESYLEQI-LSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 434 d~~~la~~-----------------lv~~~l~qI-~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
........ .+..++..+ -...+.|+|+|||||++++ ++ +.+|||+.++.=++
T Consensus 116 ~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~Nii~~~--~~-~~iIDwe~a~~Gdp 185 (226)
T TIGR02172 116 TFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGNLITSG--KG-TYWIDLGDFGYGNP 185 (226)
T ss_pred cHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCcEEEcC--CC-cEEEechhcCcCCH
Confidence 10000000 011111111 1345789999999999985 55 99999999886544
No 440
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=98.42 E-value=1.8e-06 Score=102.44 Aligned_cols=180 Identities=15% Similarity=0.082 Sum_probs=113.9
Q ss_pred cccccceeEEEEEeec---------CeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHH
Q 004234 300 PIAAASLGQVHRARLK---------GEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASV 370 (766)
Q Consensus 300 PIgsaSiGQVhrA~l~---------G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~ 370 (766)
++|+|.||||++|.+. ...||||..+....+.-
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~-------------------------------------- 344 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSE-------------------------------------- 344 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHH--------------------------------------
Confidence 9999999999999972 24799998765544310
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCc-cccceeeeccCCCeEEEEeecCCCChhhhhhhhh---------------cCCC
Q 004234 371 LYQEIDYTQEAANAELFASNFKDMDY-VKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDE---------------LGVD 434 (766)
Q Consensus 371 l~~ElDf~~EA~Nl~~f~~~f~~~~~-V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~---------------~g~d 434 (766)
.-++..|...+.... .+++ +........ .+..++++||++.+.|.++..... ..+.
T Consensus 345 ---~~~~~~El~~m~~~g----~H~niv~llG~~t~-~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~ 416 (609)
T KOG0200|consen 345 ---KKDLMSELNVLKELG----KHPNIVNLLGACTQ-DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALT 416 (609)
T ss_pred ---HHHHHHHHHHHHHhc----CCcchhhheeeecc-CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcC
Confidence 112233333333322 1222 222222212 556899999999999998765433 1144
Q ss_pred HHHHHHHHHHHH--HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhc-----CHH
Q 004234 435 RKRLGRYAVESY--LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEK-----DAD 507 (766)
Q Consensus 435 ~~~la~~lv~~~--l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~-----D~~ 507 (766)
...+.....+.. ++.+....++|||+-.-|||+.. +..+++.|||+++...+..-.. ..+ -..
T Consensus 417 ~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~--~~~~kIaDFGlar~~~~~~~y~--------~~~~~~~LP~k 486 (609)
T KOG0200|consen 417 TKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK--NKVIKIADFGLARDHYNKDYYR--------TKSSAGTLPVK 486 (609)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC--CCEEEEccccceeccCCCCceE--------ecCCCCcccee
Confidence 444444444433 55567889999999999999985 6789999999999654432110 011 123
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHH
Q 004234 508 KVLQAMVQMGVLVPTGDTTAVRRTAQFF 535 (766)
Q Consensus 508 ~v~~~l~~lG~~~~~~D~~~l~~~i~~~ 535 (766)
.|+++-+.-...+..+|++++...+.++
T Consensus 487 WmApEsl~~~~ft~kSDVWSfGI~L~Ei 514 (609)
T KOG0200|consen 487 WMAPESLFDRVFTSKSDVWSFGILLWEI 514 (609)
T ss_pred ecCHHHhccCcccccchhhHHHHHHHHH
Confidence 5666666666777888999998755443
No 441
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=98.41 E-value=5.9e-07 Score=94.25 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=73.7
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
++--|.+|||++-++|..-..-...|..........+...+..+|..+++|||+|.+||||-+.+.-+++|+|||.....
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred CceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 34568999999998887632222222222223333344567889999999999999999997655669999999999876
Q ss_pred ChhhHHHHHHHHHHHhhcCHHHHHHHHHHcC-CCCCCCCHHHHHHH
Q 004234 487 SPNIREGLLEAFYGIYEKDADKVLQAMVQMG-VLVPTGDTTAVRRT 531 (766)
Q Consensus 487 ~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG-~~~~~~D~~~l~~~ 531 (766)
+..... .-....-.+..+.+.+.+-. ...|..|..+|.-.
T Consensus 174 g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi 214 (378)
T KOG1345|consen 174 GTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGII 214 (378)
T ss_pred Cceehh-----hhhhcccCCcHHHhhccccceEecccccchheeee
Confidence 543211 11111222333333332222 23456688777643
No 442
>PRK05231 homoserine kinase; Provisional
Probab=98.35 E-value=6.4e-06 Score=89.38 Aligned_cols=50 Identities=8% Similarity=0.090 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEec
Q 004234 270 PPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQR 325 (766)
Q Consensus 270 pp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqr 325 (766)
.+++.+++..++ +.+|. .++ .+.++++.|...++|+...++..+++|+.+
T Consensus 5 t~ls~~~l~~~l-~~y~~--~~~---~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~ 54 (319)
T PRK05231 5 TDVSDDELAAFL-APYDL--GEL---LSLKGIAEGIENSNFFLTTTQGEYVLTLFE 54 (319)
T ss_pred ccCCHHHHHHHH-HhcCC--chh---hccchhccccccceEEEEeCCCcEEEEEec
Confidence 456677777777 55664 111 123689999999999998855578999763
No 443
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=98.29 E-value=1.1e-05 Score=88.51 Aligned_cols=188 Identities=17% Similarity=0.173 Sum_probs=121.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
-.|..|--|-||.|+- +|..+||||-+..|----.+|-.+ ..=+ ++ ....++-++..++.-++
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV----~GEf-RF--Rhgyck~NPRKMVk~WA--------- 213 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYV----SGEF-RF--RHGYCKHNPRKMVKTWA--------- 213 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhc----ccee-ee--ecccccCCcHHHHHHHH---------
Confidence 3788899999999999 899999999877664332222111 0000 00 01123446666766554
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHH---HHHHHHHHHHHHHHhCC
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKR---LGRYAVESYLEQILSHG 454 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~---la~~lv~~~l~qI~~~G 454 (766)
..|.+|+.+++. ..|.+|+++ +-...||||+|+.+-... ...+....+.+.. +-..++..+-.+....+
T Consensus 214 EKE~RNLkRl~~-----aGIP~PePI--lLk~hVLVM~FlGrdgw~-aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~ 285 (520)
T KOG2270|consen 214 EKEMRNLKRLNN-----AGIPCPEPI--LLKNHVLVMEFLGRDGWA-APKLKDASLSTSKARELYQQCVRIMRRLYQKCR 285 (520)
T ss_pred HHHHHHHHHHHh-----cCCCCCCce--eeecceEeeeeccCCCCc-CcccccccCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 357899999864 458888888 467789999999642211 1112223333222 22222322223334689
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCC
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLV 520 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~ 520 (766)
.+|+|+.--|+|+. +|++.+||-+.+...+......++ ..|...+-.-+.++|+..
T Consensus 286 LVHADLSEfN~Lyh---dG~lyiIDVSQSVE~DHP~aldFL-------RmDc~NVn~FF~r~gv~v 341 (520)
T KOG2270|consen 286 LVHADLSEFNLLYH---DGKLYIIDVSQSVEHDHPHALDFL-------RMDCNNVNDFFRRLGVAV 341 (520)
T ss_pred eeccchhhhhheEE---CCEEEEEEccccccCCChhHHHHH-------HHHHHHHHHHHHHcCCee
Confidence 99999999999996 799999999998888776554443 347777778888888644
No 444
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.23 E-value=7.7e-07 Score=108.57 Aligned_cols=128 Identities=6% Similarity=-0.092 Sum_probs=78.7
Q ss_pred CeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH--HHHHHHHhCCccccCCCCCcEEEee-----------------
Q 004234 409 PQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE--SYLEQILSHGFFHADPHPGNIAVDD----------------- 469 (766)
Q Consensus 409 ~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~--~~l~qI~~~GffHaDpHPGNILV~~----------------- 469 (766)
..+++|||++ .+|.++.......++...+...+.+ ..+..+|..|++|+|+||.|||+..
T Consensus 54 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 54 SIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred hhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 4578899874 4888876433333555555444333 3477899999999999999999963
Q ss_pred cCCCcEEEEeecceeccChhhHHHHHHH----------HHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 470 VNGGRLIFYDFGMMGSISPNIREGLLEA----------FYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 470 ~~~g~l~LiDFGlv~~L~~~~r~~l~~l----------~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
..++.+++.|||+++.........+... ......+.+.|++|+++..+-.....|++++.-.+.+++.
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~ 210 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC 210 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh
Confidence 0133455555555543211000000000 0011224566899998876667788999999988877764
No 445
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.21 E-value=6.6e-05 Score=84.68 Aligned_cols=111 Identities=23% Similarity=0.239 Sum_probs=67.8
Q ss_pred CCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cC-eeEEEEEecCCccchHHHHHHHHHHHHHHHhh
Q 004234 271 PFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KG-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQK 348 (766)
Q Consensus 271 p~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l-~G-~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~ 348 (766)
++..+.+...+.+..|.- +--+..+.++++.|-+..||+..+ +| +.|+||...|.++..
T Consensus 6 ~l~~~~v~~yl~~~~~~~--~~~~~~~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~----------------- 66 (401)
T PRK09550 6 TLTEEDAVEYAALKLGLF--DPKALLTAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVV----------------- 66 (401)
T ss_pred eCCHhHHHHHHHHhcCCC--CCcccceeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccc-----------------
Confidence 445555555554433310 001233457999999999999999 56 599999876654311
Q ss_pred cCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCCh
Q 004234 349 IDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKI 422 (766)
Q Consensus 349 ~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L 422 (766)
+. .|.- ..+ .+..|++.+..+.+. ....+|+||..-....++||||+++.++
T Consensus 67 --g~------~wpl---------~~e-R~~~Eae~L~~l~~~----~p~~VPkV~~~D~~~~~lVME~L~~~~~ 118 (401)
T PRK09550 67 --GE------SWPL---------TLD-RARIEAEALKIQAKY----VPDLVPKVYHYDEELAVTVMEDLSDHKI 118 (401)
T ss_pred --cc------cccc---------cHH-HHHHHHHHHHHHHhh----CCCCCCeEEEECCCCCEEEEecCCCccH
Confidence 00 0100 001 234566666666543 2357999998766778999999998653
No 446
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.21 E-value=3.5e-05 Score=80.19 Aligned_cols=35 Identities=40% Similarity=0.692 Sum_probs=27.6
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
..+++|+|+||+||++++ ++...++||+.+..=++
T Consensus 163 ~~~l~HGD~~~~Nvlv~~--~~i~giIDw~~a~~gDp 197 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQD--GRLSAVIDFGCLGVGDP 197 (235)
T ss_pred CceEEeCCCCCCcEEEEC--CCEEEEEeCcccCcCCh
Confidence 346899999999999973 33356999999876555
No 447
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.20 E-value=2.8e-06 Score=92.77 Aligned_cols=180 Identities=13% Similarity=0.130 Sum_probs=105.2
Q ss_pred ccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEID 376 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElD 376 (766)
.-+|.|.||+|-.+.+ .+..|||||.+ .+.+ .++...
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik---------------~V~k----------------------YreAa~---- 133 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIK---------------NVDK----------------------YREAAL---- 133 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHH---------------HHHH----------------------HhhHHH----
Confidence 4699999999999998 48899999762 1111 111111
Q ss_pred HHHHHHHHHHHHHhcCC-CCccccceeeeccCCCeEEEEeecCCCChhhhhhh-hhcCCCHHH---HHHHHHHHHHHHHH
Q 004234 377 YTQEAANAELFASNFKD-MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSL-DELGVDRKR---LGRYAVESYLEQIL 451 (766)
Q Consensus 377 f~~EA~Nl~~f~~~f~~-~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l-~~~g~d~~~---la~~lv~~~l~qI~ 451 (766)
.|.+-++++.+.-.. ...+..-.-+-+|-+..++|.|.+ |.++.|.... .-..+.... ++..++++ +.-+|
T Consensus 134 --iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s-v~fLh 209 (415)
T KOG0671|consen 134 --IEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLES-VAFLH 209 (415)
T ss_pred --HHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHH-HHHHH
Confidence 222333344332111 011222222346778889999976 5555564321 111222333 23333332 56678
Q ss_pred hCCccccCCCCCcEEEeec------------------CCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHH
Q 004234 452 SHGFFHADPHPGNIAVDDV------------------NGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAM 513 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~------------------~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l 513 (766)
..+++|.|+||+||++... ..-.|+++|||.+..-.+.. ..++.---..+.+.+
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------s~iVsTRHYRAPEVi 281 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------STIVSTRHYRAPEVI 281 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--------ceeeeccccCCchhe
Confidence 9999999999999998531 12258999999998766543 122221223455677
Q ss_pred HHcCCCCCCCCHHHHHHHH
Q 004234 514 VQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 514 ~~lG~~~~~~D~~~l~~~i 532 (766)
+.+|.-. ..|++++.-.+
T Consensus 282 LgLGwS~-pCDvWSiGCIL 299 (415)
T KOG0671|consen 282 LGLGWSQ-PCDVWSIGCIL 299 (415)
T ss_pred eccCcCC-ccCceeeeeEE
Confidence 7888854 47998887554
No 448
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.19 E-value=1.7e-05 Score=79.50 Aligned_cols=125 Identities=24% Similarity=0.387 Sum_probs=88.6
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
.-+|.|..+.||.+.+.|.+||+|+||++.... ++.
T Consensus 28 ~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~--------------------------------------------~l~ 63 (201)
T COG2112 28 KELAKGTTSVVYLGEWRGGEVALKVRRRDSPRR--------------------------------------------NLE 63 (201)
T ss_pred hhhhcccccEEEEeeccCceEEEEEecCCcchh--------------------------------------------hHH
Confidence 458999999999999999999999998765322 344
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCcccc
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFHA 458 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffHa 458 (766)
.||+-++..+.. -..|++|. -++..+.|||++|.+|.+... +.+++++...+=.+| -+=..|+-|.
T Consensus 64 kEakiLeil~g~------~~~p~vy~--yg~~~i~me~i~G~~L~~~~~----~~~rk~l~~vlE~a~--~LD~~GI~H~ 129 (201)
T COG2112 64 KEAKILEILAGE------GVTPEVYF--YGEDFIRMEYIDGRPLGKLEI----GGDRKHLLRVLEKAY--KLDRLGIEHG 129 (201)
T ss_pred HHHHHHHHhhhc------CCCceEEE--echhhhhhhhhcCcchhhhhh----cccHHHHHHHHHHHH--HHHHhccchh
Confidence 566666655432 23688883 456677799999999988643 125665544433332 1235799999
Q ss_pred CCCC--CcEEEeecCCCcEEEEeeccee
Q 004234 459 DPHP--GNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 459 DpHP--GNILV~~~~~g~l~LiDFGlv~ 484 (766)
.+|- -||++. ++++.+|||-.+.
T Consensus 130 El~~~~k~vlv~---~~~~~iIDFd~At 154 (201)
T COG2112 130 ELSRPWKNVLVN---DRDVYIIDFDSAT 154 (201)
T ss_pred hhcCCceeEEec---CCcEEEEEccchh
Confidence 9983 366664 5699999998777
No 449
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.11 E-value=0.00011 Score=77.44 Aligned_cols=138 Identities=20% Similarity=0.238 Sum_probs=83.8
Q ss_pred ccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
.++..|-..++|+...+|+.+++|+..++.... .+|..
T Consensus 2 ~~~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~------------------------------------------~~~r~ 39 (256)
T TIGR02721 2 QTLSGGLTNRSWRIEHPGISFVWRPQSPVCKAL------------------------------------------GVDRQ 39 (256)
T ss_pred CcCCCcCcCCeEEEEeCCccEEEeeCCcccccc------------------------------------------cCcHH
Confidence 366778888999998888899999764331110 12445
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhh--------hh-------h---hhcC--CCHH-H
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRI--------QS-------L---DELG--VDRK-R 437 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~--------~~-------l---~~~g--~d~~-~ 437 (766)
+|.+++..+.+. .+ .|+++.. ...+++|||++|.+++.. .. + ...+ .+.. .
T Consensus 40 ~E~~~l~~l~~~-----g~-~P~~i~~--~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~ 111 (256)
T TIGR02721 40 REYQILQALSAL-----GL-APKPILV--NEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKAR 111 (256)
T ss_pred HHHHHHHHHHhc-----CC-CCceEEE--eCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 566666666541 12 5888853 346899999999887631 00 0 0011 1111 1
Q ss_pred HHHH-----------HHHHHHHHHH--------hCCccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 438 LGRY-----------AVESYLEQIL--------SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 438 la~~-----------lv~~~l~qI~--------~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
+... .+...++.+. ...+.|+|+|||||++++ ++ +.+|||..++.=++.
T Consensus 112 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~~--~~-~~lIDwE~a~~gdp~ 179 (256)
T TIGR02721 112 IAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVTP--QG-LKLIDWEYASDGDIA 179 (256)
T ss_pred HHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEeC--CC-CEEEeccccCcCCHH
Confidence 1110 0111122222 236899999999999984 44 899999999876653
No 450
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.10 E-value=6.4e-05 Score=84.74 Aligned_cols=110 Identities=14% Similarity=0.175 Sum_probs=67.5
Q ss_pred hCCCCCChHHHHHHHHHH------hCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHH
Q 004234 267 DQVPPFPSETAVSIVEEE------LGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLR 340 (766)
Q Consensus 267 d~vpp~p~~~v~~iie~e------lG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~ 340 (766)
....+++.+.+...+.+. +|.. +.....+++|-|....||+-...+..|+||...|.+...
T Consensus 4 ~~y~~l~~~~l~~yl~~~~~~~~~l~g~----~~~l~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~v--------- 70 (418)
T PLN02756 4 SEFRPLDEKSLVEYIKATPALSSKIGND----LDDLKIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCI--------- 70 (418)
T ss_pred cccccCCHHHHHHHHHHccchhhhcCCC----CCCceEEEcCCCceeeEEEEEcCCccEEEEeCCccccCC---------
Confidence 344556666666655543 3321 223455789999999999988777789999887776421
Q ss_pred HHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCC
Q 004234 341 VIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPG 419 (766)
Q Consensus 341 ~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG 419 (766)
+. ..+.+.. .+ ..|++.+....+. ..+.||+||.--....+++|||++|
T Consensus 71 ----------ga--~wpl~~~---R~-----------~~Ea~aL~~~~~~----~p~~VPkVy~~ded~~vlvME~L~~ 119 (418)
T PLN02756 71 ----------GE--SWPMTKE---RA-----------YFEATALREHGRL----CPDHVPEVYHFDRTMALIGMRYLEP 119 (418)
T ss_pred ----------Cc--cccCCcc---HH-----------HHHHHHHHHhhhc----CCCCCCeEEEECCCCCEEEEeecCC
Confidence 00 0000100 00 1234444444332 3478999998666778999999988
No 451
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.06 E-value=5.9e-05 Score=84.64 Aligned_cols=114 Identities=16% Similarity=0.103 Sum_probs=70.2
Q ss_pred hCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeec--CeeEEEEEecCCccchHHHHHHHHHHHHH
Q 004234 267 DQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK--GEEVVVKVQRPGLKDLFDIDLKNLRVIAE 344 (766)
Q Consensus 267 d~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~--G~~VAVKVqrP~i~~~i~~Dl~il~~la~ 344 (766)
+...|+..+++...+.+.+|. +..- +....++||-|-..-||++.+. ++.|+||.-.|-++..
T Consensus 5 ~~y~~l~~~~v~~yl~~~l~~-~~~~-~~~~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~------------- 69 (409)
T PRK12396 5 TKYFLMEANDVIVYVKEKLSK-FEHA-KGLQCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARIS------------- 69 (409)
T ss_pred ccceeCCHhHHHHHHHHhcCC-CCCc-ccceeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccC-------------
Confidence 345566777777776665551 1100 2234579999999999999983 6789999765544310
Q ss_pred HHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCCh
Q 004234 345 YLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKI 422 (766)
Q Consensus 345 ~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L 422 (766)
+ ..+.+.. .-+.|+.-+..+.+... =.+|++|..-....++|||+++...+
T Consensus 70 ------~---swpL~~~--------------R~~~E~~aL~~~~~~~P----~~VP~vy~~D~e~~~~vMEdL~~~~i 120 (409)
T PRK12396 70 ------D---EFKLSTN--------------RIRIESDVLQLEEELAP----GLVPKVYLFDSVMNCCVMEDLSDHTI 120 (409)
T ss_pred ------C---CCCCChH--------------HHHHHHHHHHHHHhhCC----CcCCeEEEECcHHhhHHHHhCcccHH
Confidence 0 0011111 12345555555554332 24999998777778999999976443
No 452
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.94 E-value=5.5e-05 Score=81.03 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=27.4
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
.+++|+|+||+||++++ ++.+.++||+.++.=
T Consensus 175 ~~l~HgD~~~~Nil~~~--~~~~~iIDfe~a~~g 206 (296)
T cd05153 175 RGVIHADLFRDNVLFDG--DELSGVIDFYFACTD 206 (296)
T ss_pred CcCCccCcCcccEEEeC--CceEEEeehhhhcCc
Confidence 68999999999999984 555689999988864
No 453
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.88 E-value=5.4e-05 Score=81.93 Aligned_cols=94 Identities=22% Similarity=0.368 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004234 274 SETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (766)
Q Consensus 274 ~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~ 353 (766)
|..+.+.|.+.+|.+.. --+.+|++.|++.++|+...+++.+.||+.......
T Consensus 2 w~~i~~~~~~~~~~~~~----i~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~~~~~----------------------- 54 (288)
T PF03881_consen 2 WQAIEQQISEQLGADFK----ITSIEPVSGGDINEAYRLDTDGGSYFVKVNSESGRD----------------------- 54 (288)
T ss_dssp HHHHHHHHHHHHTS---------EEEEE--SSSSEEEEEETTS-EEEEEEEEGGGCC-----------------------
T ss_pred hHHHHHHHHHHhCCCCc----eeeeEecCCCChhheEEEECCCccEEEEecChhhHH-----------------------
Confidence 56788899999997621 112379999999999999988999999998522111
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeee--ccCCCeEEEEeecCCC
Q 004234 354 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFW--EYTTPQILTMEYVPGI 420 (766)
Q Consensus 354 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~--e~st~~vLVMEyieG~ 420 (766)
-|..|+..++.+++. ..+.+|+|+. .+.+..+|+|||++..
T Consensus 55 ----------------------~f~~Ea~gL~~L~~~----~~~~vP~vi~~G~~~~~~fLlle~l~~~ 97 (288)
T PF03881_consen 55 ----------------------MFEGEAEGLKALAEA----NPIRVPKVIAWGEYDDDAFLLLEFLEMG 97 (288)
T ss_dssp ----------------------HHHHHHHHHHHHCHT----TTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred ----------------------HHHHHHHHHHHHHhc----CCCCCCeEEEEEeecCCceEEEEeecCC
Confidence 256678888777542 4578898886 3456679999999987
No 454
>PRK06148 hypothetical protein; Provisional
Probab=97.87 E-value=0.0003 Score=88.26 Aligned_cols=55 Identities=18% Similarity=0.427 Sum_probs=44.1
Q ss_pred hhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEee-cCeeEEEEEecCC
Q 004234 265 LQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARL-KGEEVVVKVQRPG 327 (766)
Q Consensus 265 Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~ 327 (766)
+....|+++.+++.+++++.+|..- +.+|+++ ..-++|+... +|+.+++|+.+|+
T Consensus 4 ~~~~~p~~s~~~~~~~~~~~ygl~~-------~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~ 59 (1013)
T PRK06148 4 LSHPAPEFTTKDAEALLAQHFGISA-------TATPLDG-ERDLNFRLTTDDGADYILKIVNPS 59 (1013)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCce-------EEeecCC-cCCceEEEEeCCCCeEEEEEcCCc
Confidence 4456799999999999999999642 2357755 5688999988 6889999999876
No 455
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.83 E-value=2.5e-05 Score=84.64 Aligned_cols=162 Identities=22% Similarity=0.314 Sum_probs=107.0
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
+-||-|.-.-||.+.. +|++.++|+-|-|-. -+..++.=-.++.+.. ...|.-+ .-+.-
T Consensus 98 nqIGVGKESDIY~v~d~~G~~~~lK~HRLGRt-----SFR~Vk~kRDY~r~r~------~~sWlyL---------SRlaa 157 (465)
T KOG2268|consen 98 NQIGVGKESDIYVVADEEGNPLILKLHRLGRT-----SFRNVKNKRDYLRKRK------SGSWLYL---------SRLAA 157 (465)
T ss_pred cccccccccceEEEecCCCCchhHHHHhhhhh-----hHHHhhhhhhhHhcCC------ccchhhh---------HHHHH
Confidence 4688899999999999 799999997754421 1111111111111111 1112211 11223
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHhCCccc
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILSHGFFH 457 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~~GffH 457 (766)
.+|-..|..|.+ ..+.||+++. +++.+.|||+++|.++..+... .++..+...++.. +.-+-.+|++|
T Consensus 158 ~kEfafmkaL~e-----~gfpVPkpiD--~~RH~Vvmelv~g~Pl~~v~~v----~d~~~ly~~lm~~-Iv~la~~GlIH 225 (465)
T KOG2268|consen 158 TKEFAFMKALYE-----RGFPVPKPID--HNRHCVVMELVDGYPLRQVRHV----EDPPTLYDDLMGL-IVRLANHGLIH 225 (465)
T ss_pred HHHHHHHHHHHH-----cCCCCCCccc--ccceeeHHHhhcccceeeeeec----CChHHHHHHHHHH-HHHHHHcCcee
Confidence 344555556544 3578999995 6889999999999999886533 2455555555443 34456899999
Q ss_pred cCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHH
Q 004234 458 ADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGL 494 (766)
Q Consensus 458 aDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l 494 (766)
+|-.-=||+|.+ ++++++|||-.+-..+.+..+.|
T Consensus 226 gDFNEFNimv~d--d~~i~vIDFPQmvS~sh~nA~~Y 260 (465)
T KOG2268|consen 226 GDFNEFNIMVKD--DDKIVVIDFPQMVSTSHPNAEYY 260 (465)
T ss_pred cccchheeEEec--CCCEEEeechHhhccCCCcccee
Confidence 999999999986 88999999998888776654443
No 456
>PRK09902 hypothetical protein; Provisional
Probab=97.81 E-value=0.00041 Score=71.77 Aligned_cols=147 Identities=18% Similarity=0.129 Sum_probs=96.2
Q ss_pred cCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHH
Q 004234 296 FDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEI 375 (766)
Q Consensus 296 fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~El 375 (766)
+|+---+.|+.+.|++-.+.|+.+-+|-|.-.+.... ++ |. -+-
T Consensus 21 ve~pN~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~---------------r~-P~--------------------g~p 64 (216)
T PRK09902 21 VEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSV---------------RY-PF--------------------GRP 64 (216)
T ss_pred ecCCCcCCCCcceEEEEEeCCcEEEEEeccCcccccc---------------cC-CC--------------------Cch
Confidence 4443456799999999998888999998843332220 00 11 133
Q ss_pred HHHHHHHHHHHHHHhcCCCCccccceeeecc------CCCeEEEEeecCC-CChhhhhhhhhc---CCCHHHHHHHHHHH
Q 004234 376 DYTQEAANAELFASNFKDMDYVKVPTIFWEY------TTPQILTMEYVPG-IKINRIQSLDEL---GVDRKRLGRYAVES 445 (766)
Q Consensus 376 Df~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~------st~~vLVMEyieG-~~L~d~~~l~~~---g~d~~~la~~lv~~ 445 (766)
-|.+|-+++.++.+ -+|.+|+++-.- .-+.+||+|-++| .+|.++...... +...++-.-..+..
T Consensus 65 tf~rE~~~L~~L~~-----~GvPVP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~ 139 (216)
T PRK09902 65 TIVREVAVIKELER-----AGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVAL 139 (216)
T ss_pred HHHHHHHHHHHHHH-----cCCCCCccceeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHH
Confidence 56777888888876 346677776211 1136999999987 466665321111 11122223333455
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCc--EEEEeecceec
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGR--LIFYDFGMMGS 485 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~--l~LiDFGlv~~ 485 (766)
.+.++|..|+.|+||-|-||+++. +|+ +.||||--++.
T Consensus 140 ~ia~LH~~Gv~Hgdly~khIll~~--~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 140 AFKKMHSVNRQHGCCYVRHIYVKT--EGKAEAGFLDLEKSRR 179 (216)
T ss_pred HHHHHHHCCCcCCCCCHhheeecC--CCCeeEEEEEhhccch
Confidence 688999999999999999999975 455 99999976654
No 457
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.75 E-value=0.00031 Score=76.14 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=28.3
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceeccC
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 487 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~ 487 (766)
..+++|+|+||+||++++ ++...++||+.+..=.
T Consensus 186 ~~~l~HgD~~~~Nvl~~~--~~~~~vIDfd~~~~~~ 219 (307)
T TIGR00938 186 PRGVIHADLFPDNVLFDG--DSVKGVIDFYFACTDA 219 (307)
T ss_pred CCccCCCCCCcCcEEEEC--CceEEEeecccccCcc
Confidence 378999999999999985 5556899999987543
No 458
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.74 E-value=0.00035 Score=72.18 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=29.0
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
.++.|+|+||+||++++ +++.+.+|||-.++.-++
T Consensus 170 ~~l~H~Dl~~~Nil~~~-~~~~~~lIDwe~a~~~~~ 204 (235)
T cd05157 170 IVFCHNDLLSGNIIYNE-EKNSVKFIDYEYAGYNYR 204 (235)
T ss_pred EEEEcCCCCcCcEEEeC-CCCCEEEEEcccCCcCch
Confidence 46999999999999984 246899999998886554
No 459
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.68 E-value=0.00023 Score=76.86 Aligned_cols=42 Identities=24% Similarity=0.437 Sum_probs=32.0
Q ss_pred HHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhh
Q 004234 447 LEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNI 490 (766)
Q Consensus 447 l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~ 490 (766)
...+|..|++|+|++|.|++++. +|.+.|.||+.+.......
T Consensus 158 vA~Lh~~GlVHgdi~~~nfll~~--~G~v~Lg~F~~~~r~g~~~ 199 (288)
T PF14531_consen 158 VANLHSYGLVHGDIKPENFLLDQ--DGGVFLGDFSSLVRAGTRY 199 (288)
T ss_dssp HHHHHHTTEEEST-SGGGEEE-T--TS-EEE--GGGEEETTEEE
T ss_pred HHHHhhcceEecccceeeEEEcC--CCCEEEcChHHHeecCcee
Confidence 55678999999999999999996 8999999999998776543
No 460
>PRK06149 hypothetical protein; Provisional
Probab=97.68 E-value=0.00041 Score=86.75 Aligned_cols=58 Identities=16% Similarity=0.216 Sum_probs=43.2
Q ss_pred HHhhhhCCCCCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCC
Q 004234 262 LSELQDQVPPFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPG 327 (766)
Q Consensus 262 L~~Lqd~vpp~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~ 327 (766)
+..+....|.++.+++.+++++.+|..- + ..++++..- ++|+.+.++..+++|+.+|.
T Consensus 7 ~~~~~~~~p~ls~~~~~~ll~~~ygl~~-~------~~~L~s~~d-~nf~v~t~~~~yVLKi~~~~ 64 (972)
T PRK06149 7 IDRSSLPAPDVSEAQAERILAEHYGLSG-T------LTELGSQQD-RNFRVDSDGGRFVLKICHAA 64 (972)
T ss_pred hccCCCCCCCCCHHHHHHHHHHhcCCce-E------EEecCCcCc-ceEEEEecCCcEEEEeCCcc
Confidence 3446678899999999999999998541 1 246665554 78988875567888998775
No 461
>PLN02876 acyl-CoA dehydrogenase
Probab=97.67 E-value=0.00042 Score=85.31 Aligned_cols=107 Identities=15% Similarity=0.197 Sum_probs=67.2
Q ss_pred CCChHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeec-C---eeEEEEEecCCccchHHHHHHHHHHHHHHH
Q 004234 271 PFPSETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLK-G---EEVVVKVQRPGLKDLFDIDLKNLRVIAEYL 346 (766)
Q Consensus 271 p~p~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~-G---~~VAVKVqrP~i~~~i~~Dl~il~~la~~l 346 (766)
+++.+.+.+.+.+.++. +..-...+..++++.|....+|+-++. | ..+++|...|+....
T Consensus 17 ~~d~~~l~~~l~~~~~~-~~~~~~~~~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--------------- 80 (822)
T PLN02876 17 RFDEDALLRYAAANVAG-FPVPPSTFKVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--------------- 80 (822)
T ss_pred cCCHHHHHHHHHHhCCC-cCCCccceeEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc---------------
Confidence 35666666666665431 111111245578999999999998873 2 478888765442110
Q ss_pred hhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC-----CCeEEEEeecCCCC
Q 004234 347 QKIDPKSDGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT-----TPQILTMEYVPGIK 421 (766)
Q Consensus 347 ~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s-----t~~vLVMEyieG~~ 421 (766)
..-++.+|++.+..+.. ...+.+|++|.... +..++||||++|..
T Consensus 81 --------------------------~~~~~~rE~~~l~~L~~----~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~ 130 (822)
T PLN02876 81 --------------------------SAHAVEREYQVLRALGE----HTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI 130 (822)
T ss_pred --------------------------cHHHHHHHHHHHHHHhh----cCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence 01145567777766642 25588999997433 34689999999986
Q ss_pred hh
Q 004234 422 IN 423 (766)
Q Consensus 422 L~ 423 (766)
+.
T Consensus 131 ~~ 132 (822)
T PLN02876 131 FV 132 (822)
T ss_pred cC
Confidence 54
No 462
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.50 E-value=0.00053 Score=77.41 Aligned_cols=138 Identities=17% Similarity=0.210 Sum_probs=76.5
Q ss_pred Chhhhhh---ccCcccccccceeEEEEEee--cCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHH
Q 004234 288 PLDDVFE---RFDVEPIAAASLGQVHRARL--KGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVA 362 (766)
Q Consensus 288 ~~eeiF~---~fd~~PIgsaSiGQVhrA~l--~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~ 362 (766)
.++++|. +.-...+|=|-|..||.|.+ ..+.||+||++-.
T Consensus 70 ~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----------------------------------- 114 (590)
T KOG1290|consen 70 RIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----------------------------------- 114 (590)
T ss_pred eccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-----------------------------------
Confidence 3556665 33346899999999999999 4789999999521
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeecc------CCCeEEEEeecCCCChhhhh-hhhhcCCCH
Q 004234 363 IYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEY------TTPQILTMEYVPGIKINRIQ-SLDELGVDR 435 (766)
Q Consensus 363 i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~------st~~vLVMEyieG~~L~d~~-~l~~~g~d~ 435 (766)
..+.++...|+.+....+... -.+...=.|.+.+..+ ....+||.|++ |..|-.++ .-.-.|+..
T Consensus 115 --qhYtEaAlDEIklL~~v~~~D-----p~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl 186 (590)
T KOG1290|consen 115 --QHYTEAALDEIKLLQQVREGD-----PNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPL 186 (590)
T ss_pred --hHHHHHHHHHHHHHHHHHhcC-----CCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcH
Confidence 112222333333333222111 0001111233333322 23458999987 44444432 222234443
Q ss_pred H---HHHHHHHHHHHHHHH-hCCccccCCCCCcEEEee
Q 004234 436 K---RLGRYAVESYLEQIL-SHGFFHADPHPGNIAVDD 469 (766)
Q Consensus 436 ~---~la~~lv~~~l~qI~-~~GffHaDpHPGNILV~~ 469 (766)
. +|+..++ ..|..+| +.|++|.|+||.|||+..
T Consensus 187 ~~VK~I~~qvL-~GLdYLH~ecgIIHTDlKPENvLl~~ 223 (590)
T KOG1290|consen 187 SCVKEICRQVL-TGLDYLHRECGIIHTDLKPENVLLCS 223 (590)
T ss_pred HHHHHHHHHHH-HHHHHHHHhcCccccCCCcceeeeec
Confidence 3 2332222 3366777 579999999999999974
No 463
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.48 E-value=0.0013 Score=73.32 Aligned_cols=83 Identities=19% Similarity=0.136 Sum_probs=51.6
Q ss_pred ccccceeEEEEEeec-C-eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHHH
Q 004234 301 IAAASLGQVHRARLK-G-EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYT 378 (766)
Q Consensus 301 IgsaSiGQVhrA~l~-G-~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf~ 378 (766)
||-|-..-||++... | +.|+||.-.|-++.. +. ..+.+.. .-.
T Consensus 3 igdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~-------------------g~--~wpl~~~--------------R~~ 47 (370)
T TIGR01767 3 VGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVV-------------------GE--SWPLTLD--------------RAR 47 (370)
T ss_pred CCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhc-------------------CC--CCCCCcc--------------HHH
Confidence 688999999999984 4 689999775544321 00 0011111 112
Q ss_pred HHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCCh
Q 004234 379 QEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKI 422 (766)
Q Consensus 379 ~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L 422 (766)
.|+.-+..+.+.. | =.+|++|.--....+++||+++...+
T Consensus 48 ~E~~~L~~~~~~~---P-~~vP~vy~~D~e~~~~vMEdL~~~~i 87 (370)
T TIGR01767 48 IESSALIRQGEHV---P-HLVPRIFHFDTEMAVTVMEDLSHHKI 87 (370)
T ss_pred HHHHHHHHhhccC---c-cccCeEEEEccccceehHhhCccchH
Confidence 4555555444322 2 26999998777778999999966443
No 464
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.31 E-value=0.001 Score=71.57 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=29.4
Q ss_pred CCccccCCCCCcEEEeecC---CCcEEEEeecceeccCh
Q 004234 453 HGFFHADPHPGNIAVDDVN---GGRLIFYDFGMMGSISP 488 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~---~g~l~LiDFGlv~~L~~ 488 (766)
.++.|+|+||+||++++ + ++.+.+|||..++.-++
T Consensus 179 ~~lcH~Dl~~~Nil~~~-~~~~~~~i~lIDwEya~~~~p 216 (302)
T cd05156 179 VVFCHNDLQEGNILLLN-PSSETKKLVLIDFEYASYNYR 216 (302)
T ss_pred ceEEecCCCcCeEEecC-CCCCCCcEEEEeeCCCCCCCc
Confidence 46899999999999984 1 27899999999997655
No 465
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=97.22 E-value=0.0025 Score=70.40 Aligned_cols=29 Identities=38% Similarity=0.567 Sum_probs=25.1
Q ss_pred ccccCCCCCcEEEeecCCC-cEEEEeecceec
Q 004234 455 FFHADPHPGNIAVDDVNGG-RLIFYDFGMMGS 485 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g-~l~LiDFGlv~~ 485 (766)
++|+|+||+||++++ +. -..++|||-++.
T Consensus 199 iIH~D~~~~NVl~d~--~~~~~g~iDFdDa~~ 228 (331)
T COG2334 199 IIHGDLHPDNVLFDD--DTDVSGFIDFDDAGY 228 (331)
T ss_pred eeecCCCccceeEcC--CCCeeeEEEcccccc
Confidence 899999999999985 44 388999998875
No 466
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.21 E-value=0.0096 Score=64.09 Aligned_cols=35 Identities=29% Similarity=0.464 Sum_probs=28.8
Q ss_pred CCccccCCCCCcEEEeecCCCc-EEEEeecceeccChh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGR-LIFYDFGMMGSISPN 489 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~-l~LiDFGlv~~L~~~ 489 (766)
..++|+|+||+||++++ +++ ..++||++++.=++.
T Consensus 185 ~~lvHGD~~~~Nilv~~--~~~~~gviDWe~a~iGDPa 220 (276)
T cd05152 185 TVLVHGDLHPGHILIDE--DARVTGLIDWTEAKVGDPA 220 (276)
T ss_pred CeeEeCCCCCCcEEEeC--CCCEEEEECcHhcccCCHH
Confidence 35899999999999984 466 469999999887664
No 467
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=97.05 E-value=0.0016 Score=63.58 Aligned_cols=96 Identities=15% Similarity=0.146 Sum_probs=67.1
Q ss_pred ChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHH
Q 004234 421 KINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAF 498 (766)
Q Consensus 421 ~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~ 498 (766)
+|.++.......++...+...+.+. .+..+|.+| ||+||+++. ++.+++ ||++...+....
T Consensus 2 sL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~~------- 64 (176)
T smart00750 2 SLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQS------- 64 (176)
T ss_pred cHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeeccccC-------
Confidence 4555443223335555554444332 366777777 999999985 788887 999987765321
Q ss_pred HHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Q 004234 499 YGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLN 537 (766)
Q Consensus 499 ~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~ 537 (766)
.+++.++++++...+...+..|++++...+.+++.
T Consensus 65 ----~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt 99 (176)
T smart00750 65 ----RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALD 99 (176)
T ss_pred ----CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHh
Confidence 35788999999988777888999999988877653
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.02 E-value=0.01 Score=61.01 Aligned_cols=150 Identities=22% Similarity=0.335 Sum_probs=90.1
Q ss_pred cccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccchHHHHHHHHHHHHHHHHH
Q 004234 298 VEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDY 377 (766)
Q Consensus 298 ~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d~~~i~~E~~~~l~~ElDf 377 (766)
..|||+|+.=-||.-- +....+|||.+|+....- ...-.++.++.|.. -.+...+|+++
T Consensus 6 ~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~-------~~~~~~~k~~~~~~-------------~~~~~~~E~~~ 64 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERR-------RPFKRWLKRLRPKS-------------RYRQNRRELRY 64 (199)
T ss_pred CcccccCCCceEEECC-CCCCeEEEEEcccccccc-------ccchhHHHhhcccc-------------hhHHHHHHHHH
Confidence 3689999876665433 356679999998862110 01112222222210 11223344444
Q ss_pred HHHHHHHHHHHHhcCCCCccccceeeeccCCC--eEEEEeecCC------CChhhhhhhhhcCCCHHHHHHHHHHHHHHH
Q 004234 378 TQEAANAELFASNFKDMDYVKVPTIFWEYTTP--QILTMEYVPG------IKINRIQSLDELGVDRKRLGRYAVESYLEQ 449 (766)
Q Consensus 378 ~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~--~vLVMEyieG------~~L~d~~~l~~~g~d~~~la~~lv~~~l~q 449 (766)
..+ ... -.+.....+|++|..-.|. .-+|+|.+.. .+|.++. ...+++. -...+++.+.+.
T Consensus 65 y~~------l~~-~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l--~~~~~~~--~~~~~L~~f~~~ 133 (199)
T PF10707_consen 65 YKQ------LSL-RRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL--KEGGLTE--ELRQALDEFKRY 133 (199)
T ss_pred HHH------Hhh-ccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH--HcCCccH--HHHHHHHHHHHH
Confidence 333 332 2345567889888755443 4788887632 2444443 2333444 455667888899
Q ss_pred HHhCCccccCCCCCcEEEeecCCC--cEEEEe
Q 004234 450 ILSHGFFHADPHPGNIAVDDVNGG--RLIFYD 479 (766)
Q Consensus 450 I~~~GffHaDpHPGNILV~~~~~g--~l~LiD 479 (766)
+++++++..|++|+||++....++ +++++|
T Consensus 134 l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 134 LLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID 165 (199)
T ss_pred HHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence 999999999999999999864444 599999
No 469
>PRK11768 serine/threonine protein kinase; Provisional
Probab=97.00 E-value=0.0096 Score=65.45 Aligned_cols=31 Identities=29% Similarity=0.228 Sum_probs=26.0
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
..|++|+|+|||||+++ + .+.++||+.++.=
T Consensus 195 ~~~liHgD~h~~NvL~~---d-~~~iIDFDd~~~g 225 (325)
T PRK11768 195 RLLRLHGDCHPGNILWR---D-GPHFVDLDDARMG 225 (325)
T ss_pred CccceecCCCchhcccc---C-CcEEEeCCCCCCC
Confidence 35799999999999994 4 4789999999853
No 470
>PLN02236 choline kinase
Probab=96.97 E-value=0.01 Score=65.79 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=29.5
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
..+.|+|+||+||++++ .++.+.+|||..++.-++
T Consensus 200 ~~~cH~Dl~~~Nil~~~-~~~~~~lID~Eya~~~~~ 234 (344)
T PLN02236 200 IGFCHNDLQYGNIMIDE-ETRAITIIDYEYASYNPV 234 (344)
T ss_pred ceEEeCCCCcCcEEEeC-CCCcEEEEeehhccccch
Confidence 36899999999999974 346899999999987655
No 471
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.95 E-value=0.013 Score=61.51 Aligned_cols=96 Identities=22% Similarity=0.314 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHhCCChhhhhhccCcccccccceeEEEEEeecCeeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCC
Q 004234 274 SETAVSIVEEELGAPLDDVFERFDVEPIAAASLGQVHRARLKGEEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKS 353 (766)
Q Consensus 274 ~~~v~~iie~elG~~~eeiF~~fd~~PIgsaSiGQVhrA~l~G~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~ 353 (766)
|..+.+.+-+.+|.. ++ -+.+++.-|.+-+.|+-.....++-||+..-
T Consensus 2 w~~i~~qlse~~g~~--~i---~er~~v~gG~inea~~v~dg~~~~FvK~n~~--------------------------- 49 (286)
T COG3001 2 WQAISQQLSEQLGEG--EI---KEREEVSGGDINEAWRLRDGTDPFFVKCNQR--------------------------- 49 (286)
T ss_pred hHHHHHHHHHHhCch--hh---hcccccCCccccceeEeecCCcceEEEecch---------------------------
Confidence 567778888888865 22 2346788888888887777788999998611
Q ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccC--CCeEEEEeecCCCChh
Q 004234 354 DGAKRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYT--TPQILTMEYVPGIKIN 423 (766)
Q Consensus 354 ~~~~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~s--t~~vLVMEyieG~~L~ 423 (766)
..+--|..||.+++.+++ ...|.||+|+..-+ +..+|||||++-++++
T Consensus 50 ------------------~~~~~f~AEa~gL~~la~----s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d 99 (286)
T COG3001 50 ------------------EQLSMFTAEADGLELLAR----SNTITVPKVIAVGASRDHSYLVLEYLPTGPLD 99 (286)
T ss_pred ------------------hhHHHHHHHHHHHHHHHh----cCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence 012357788888888875 24589999997544 4569999999988777
No 472
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.89 E-value=0.0038 Score=68.54 Aligned_cols=35 Identities=26% Similarity=0.377 Sum_probs=30.5
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
..++|+|.|+|||++++ ++.+.++||++++.=+|.
T Consensus 198 ~~lvHGD~~~gNlii~~--~~~~gVlDwe~~~lGDP~ 232 (321)
T COG3173 198 PVLVHGDYRPGNLIIDP--GRPTGVLDWELATLGDPL 232 (321)
T ss_pred ceeeeCCcccCCEEEeC--CCeeEEEeccccccCCcH
Confidence 46899999999999986 666999999999987764
No 473
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=96.87 E-value=0.00031 Score=80.01 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=81.9
Q ss_pred eEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHHHHHHHh----CCccccCCCCCcEEEeecCCCcEEEEeecceec
Q 004234 410 QILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESYLEQILS----HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 485 (766)
Q Consensus 410 ~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~l~qI~~----~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~ 485 (766)
.++.|++|+-.+|.++...+..+..+.. .++....+|+-. .|.+|+|++|.||+... +.++++.|||++..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~---s~~~~~~~q~~~~~~yk~~ihrdlkp~nif~~~--d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSL---SLMLDIFKQIAPAVEYKGLIHRDLKPSNIFFSD--DDQLKIGDFGLVTS 405 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccch---hHHHHHHHhhccchhhccchhhhcccccccccc--chhhhhhhhhheee
Confidence 5899999999999998754443332221 112222333332 89999999999999986 77999999999998
Q ss_pred cChhhH--HHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHH
Q 004234 486 ISPNIR--EGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFLNSFE 540 (766)
Q Consensus 486 L~~~~r--~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l~~~~ 540 (766)
.+.... ...++... ..+...||.++-+.---.....|+++|+-.+.+++..|.
T Consensus 406 ~~~~~~~~~~~a~~t~--~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~ 460 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQ--QVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFS 460 (516)
T ss_pred cccCCcccchhhhhhh--cccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhc
Confidence 866540 01111111 134555666666655455678899999988877776553
No 474
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=96.71 E-value=0.0016 Score=75.67 Aligned_cols=124 Identities=14% Similarity=0.132 Sum_probs=85.3
Q ss_pred CCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhCCccccCCCCCcEEEeecC
Q 004234 394 MDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSHGFFHADPHPGNIAVDDVN 471 (766)
Q Consensus 394 ~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~GffHaDpHPGNILV~~~~ 471 (766)
.+.+.-+..--+-.++.+++++|+.|+.+-...... ...+........++. .+.+.|..|++|+|+||.||+++.
T Consensus 56 ~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~-- 132 (612)
T KOG0603|consen 56 TPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLL-- 132 (612)
T ss_pred CCceeeeeeeeccccchhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecc--
Confidence 445555555556678889999999998665422111 112222333333333 367788999999999999999986
Q ss_pred CCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHH
Q 004234 472 GGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTA 532 (766)
Q Consensus 472 ~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i 532 (766)
+|.+++.|||..+..-+.... .+++.+++++... | .....|-..+...+
T Consensus 133 ~Ghi~~tdfglske~v~~~~~----------cgt~eymApEI~~-g-h~~a~D~ws~gvl~ 181 (612)
T KOG0603|consen 133 EGHIKLTDFGLSKEAVKEKIA----------CGTYEYRAPEIIN-G-HLSAADWWSFGVLA 181 (612)
T ss_pred cCccccCCchhhhHhHhhhhc----------ccchhhhhhHhhh-c-cCCcccchhhhhhH
Confidence 899999999998876554432 6799999999998 3 34456766655433
No 475
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.51 E-value=0.00062 Score=83.02 Aligned_cols=46 Identities=24% Similarity=0.255 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 436 KRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 436 ~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
+.++-.++ ..+.|+|..|+.|+|+|.+||||+. =+=+.|.||..-+
T Consensus 123 kWiaFQLL-~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 123 KWIAFQLL-KALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFK 168 (1431)
T ss_pred HHHHHHHH-HHHHHHHHcCccccccccceEEEee--echhhhhcccccC
Confidence 44444433 3479999999999999999999985 5567888887654
No 476
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.43 E-value=0.024 Score=62.57 Aligned_cols=34 Identities=29% Similarity=0.513 Sum_probs=29.0
Q ss_pred ccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 455 FFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
+-|.|++|+||++.+ .++++.+|||..++.-++-
T Consensus 184 ~CHnDl~~~NiL~~~-~~~~l~lID~EYag~nd~~ 217 (330)
T PLN02421 184 FAHNDLLSGNLMLNE-DEGKLYFIDFEYGSYSYRG 217 (330)
T ss_pred EEECCCCcccEEEeC-CCCcEEEEcccccCCCccH
Confidence 789999999999974 3578999999999976653
No 477
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.34 E-value=0.004 Score=74.09 Aligned_cols=71 Identities=23% Similarity=0.236 Sum_probs=48.3
Q ss_pred EeecCCCChhhhhhhh-hcCCCHHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccC
Q 004234 414 MEYVPGIKINRIQSLD-ELGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 487 (766)
Q Consensus 414 MEyieG~~L~d~~~l~-~~g~d~~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~ 487 (766)
||||++ .|..+.... ..........-..+...++.+|..|+-|+|+||.|+++.. +|.++++|||......
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAASVFR 471 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecCcceeec
Confidence 999999 777754321 1111111111111222356788999999999999999996 8899999999887553
No 478
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.12 E-value=0.0086 Score=66.54 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=45.7
Q ss_pred CeEEEEeecCCCChhhhhhhhhcCCC-HHHHHHHHHHHHHHHHHhCCccccCCCCCcEEEeecCCC--cEEEEeecceec
Q 004234 409 PQILTMEYVPGIKINRIQSLDELGVD-RKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGG--RLIFYDFGMMGS 485 (766)
Q Consensus 409 ~~vLVMEyieG~~L~d~~~l~~~g~d-~~~la~~lv~~~l~qI~~~GffHaDpHPGNILV~~~~~g--~l~LiDFGlv~~ 485 (766)
..+|||-..+ .+|..+......... ..-+...+++ ...++++||+-|+|+|..||++.-.+|+ .+++.|||++--
T Consensus 317 tlylvMkrY~-~tLr~yl~~~~~s~r~~~~~laQlLE-av~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 317 TLYLVMKRYR-QTLREYLWTRHRSYRTGRVILAQLLE-AVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred eEEEehhcch-hhHHHHHhcCCCchHHHHHHHHHHHH-HHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 3488887654 344444322111111 1111222222 2567889999999999999999743343 699999998853
No 479
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=95.36 E-value=0.011 Score=72.56 Aligned_cols=91 Identities=21% Similarity=0.198 Sum_probs=64.6
Q ss_pred HHHHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccC----hhhHHHHHHHHH-----HHhhcCHHHHHHHHHHc
Q 004234 446 YLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS----PNIREGLLEAFY-----GIYEKDADKVLQAMVQM 516 (766)
Q Consensus 446 ~l~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~----~~~r~~l~~l~~-----a~~~~D~~~v~~~l~~l 516 (766)
.++.+|..|++|+|++|.|++|+. -|++++.|||+....- ....+.+++-+. .-+.+.+++++++++.+
T Consensus 155 a~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr 232 (1205)
T KOG0606|consen 155 AVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR 232 (1205)
T ss_pred HhHhhccCCeecCCCCCCcceeee--cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence 467889999999999999999996 8999999999876432 222222222111 11346788888888877
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH
Q 004234 517 GVLVPTGDTTAVRRTAQFFLNS 538 (766)
Q Consensus 517 G~~~~~~D~~~l~~~i~~~l~~ 538 (766)
--.....|-+++.-..++|+-.
T Consensus 233 qgygkpvdwwamGiIlyeFLVg 254 (1205)
T KOG0606|consen 233 QGYGKPVDWWAMGIILYEFLVG 254 (1205)
T ss_pred hccCCCccHHHHHHHHHHHhee
Confidence 5556678888888877777643
No 480
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=95.33 E-value=0.037 Score=59.04 Aligned_cols=30 Identities=30% Similarity=0.324 Sum_probs=26.4
Q ss_pred ccccccceeEEEEEee-cCeeEEEEEecCCc
Q 004234 299 EPIAAASLGQVHRARL-KGEEVVVKVQRPGL 328 (766)
Q Consensus 299 ~PIgsaSiGQVhrA~l-~G~~VAVKVqrP~i 328 (766)
.++..|+.+.|+.++. +|+++++|+..|.-
T Consensus 8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~ 38 (253)
T PF04655_consen 8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHA 38 (253)
T ss_pred CCCCCCcceEEEEEEcCCCCeEEEEecCCcc
Confidence 4678899999999998 89999999997754
No 481
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=95.00 E-value=0.19 Score=51.90 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=23.6
Q ss_pred ccccccce-eEEEEEeecCeeEEEEE
Q 004234 299 EPIAAASL-GQVHRARLKGEEVVVKV 323 (766)
Q Consensus 299 ~PIgsaSi-GQVhrA~l~G~~VAVKV 323 (766)
+-+|.|+- |.|+++..+|+.+|+|+
T Consensus 43 efLg~g~~~~~V~kv~I~g~~YALKl 68 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEIDGRIYALKL 68 (207)
T ss_pred eecCCCCceeEEEEEEECCeEEEEEE
Confidence 56899999 99999999999999999
No 482
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.97 E-value=0.13 Score=56.39 Aligned_cols=193 Identities=18% Similarity=0.196 Sum_probs=108.4
Q ss_pred hhhccCcccccccceeEEEEEee----cC--------eeEEEEEecCCccchHHHHHHHHHHHHHHHhhcCCCCCCcccc
Q 004234 292 VFERFDVEPIAAASLGQVHRARL----KG--------EEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRD 359 (766)
Q Consensus 292 iF~~fd~~PIgsaSiGQVhrA~l----~G--------~~VAVKVqrP~i~~~i~~Dl~il~~la~~l~~~~p~~~~~~~d 359 (766)
+|+.++- .|+.|.-+.|..|.- +| +++||||-+.-+.+--.+|-.| +.=.++=.+ ..+.+
T Consensus 252 vle~i~G-iIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~Yi-KDDfRFKDR------FSK~N 323 (531)
T KOG2269|consen 252 VLESIDG-IISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYI-KDDFRFKDR------FSKQN 323 (531)
T ss_pred hHHhhhh-hhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhh-ccchhhhhh------hcccC
Confidence 3444442 577788888877743 22 3567777543333222222111 000001111 11234
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCC--HHH
Q 004234 360 WVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVD--RKR 437 (766)
Q Consensus 360 ~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d--~~~ 437 (766)
+..|+.-++ ..|..|+.++++ .++.+|.|+. -.+.||||.|+.--.+.. -.++...+. ..+
T Consensus 324 pR~i~~mWA---------EkEmhNL~RMq~-----~GlpcP~vV~--lkkhvLVMsFiGd~~~aA-PkLK~v~l~d~E~~ 386 (531)
T KOG2269|consen 324 PRGILKMWA---------EKEMHNLSRMQK-----HGLPCPQVVK--LKKHVLVMSFIGDQGLAA-PKLKNVELTDDERR 386 (531)
T ss_pred cHHHHHHHH---------HHHHHHHHHHHh-----cCCCCCceee--eecceEEEEeecCCCCCC-ccccccccChHHHH
Confidence 555554443 356789998876 3577888773 567899999985432221 011111111 222
Q ss_pred HHHHHHHHHH-HHHHhCCccccCCCCCcEEEeecCCCcEEEEeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHc
Q 004234 438 LGRYAVESYL-EQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQM 516 (766)
Q Consensus 438 la~~lv~~~l-~qI~~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~l 516 (766)
.+..-+...+ +..++.-.+|+|+.--|+|.. .|++.+||-..+...+... .+ -++.+|...+..-+...
T Consensus 387 ~aY~q~~~~M~~lY~Ec~LVHADlSEyN~Lw~---~gKvw~IDVsQsvep~HP~--~L-----eFL~RDc~Ni~~FF~r~ 456 (531)
T KOG2269|consen 387 NAYDQVQSIMCRLYKECLLVHADLSEYNLLWT---PGKVWVIDVSQSVEPSHPR--SL-----EFLTRDCQNIITFFTRI 456 (531)
T ss_pred HHHHHHHHHHHHHHHhhheeecchhhhhheec---CCceEEEechhccCCCCcc--hh-----HHHHHHHHHHHHHHHhc
Confidence 2333333333 444578899999999999997 5799999977665554332 22 22356788888888888
Q ss_pred CCC
Q 004234 517 GVL 519 (766)
Q Consensus 517 G~~ 519 (766)
|..
T Consensus 457 G~p 459 (531)
T KOG2269|consen 457 GTP 459 (531)
T ss_pred CCC
Confidence 864
No 483
>PRK10271 thiK thiamine kinase; Provisional
Probab=94.79 E-value=0.022 Score=58.00 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=28.4
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccChh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPN 489 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~~ 489 (766)
.-..|+|+||+||++++ +| +++|||+.++.-++.
T Consensus 77 ~~p~H~D~~~~N~~~~~--~~-~~lIDwe~a~~gDp~ 110 (188)
T PRK10271 77 LAPLHMDVHAGNLVHSA--SG-LRLIDWEYAGDGDIA 110 (188)
T ss_pred eeeecCCCCCccEEEEC--CC-EEEEeCCcccCCCHH
Confidence 34689999999999974 44 999999999987764
No 484
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=93.59 E-value=0.41 Score=53.64 Aligned_cols=124 Identities=13% Similarity=0.069 Sum_probs=79.8
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhc-------CCCHHHHHHHH--HHHHHHHHHhCCccccCCCCCcEEEeecCCCcEEE
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDEL-------GVDRKRLGRYA--VESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIF 477 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~-------g~d~~~la~~l--v~~~l~qI~~~GffHaDpHPGNILV~~~~~g~l~L 477 (766)
.......+-+..-+.|..+....+. .+...++.... +...+.++|.+|++|-|+-..|..|++ .-+++|
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd--~LqVkl 437 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD--QLQVKL 437 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh--heeEEe
Confidence 3344455566665666665442221 11222333332 345578899999999999999999986 678999
Q ss_pred EeecceeccChhhHHHHHHHHHHHhhcCHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHH
Q 004234 478 YDFGMMGSISPNIREGLLEAFYGIYEKDADKVLQAMVQMGVLVPTGDTTAVRRTAQFFL 536 (766)
Q Consensus 478 iDFGlv~~L~~~~r~~l~~l~~a~~~~D~~~v~~~l~~lG~~~~~~D~~~l~~~i~~~l 536 (766)
.|=.+.+.+=|.+-..+.+- -++-...|..+.+.....+...|.++|...+-+++
T Consensus 438 tDsaLSRDLFP~DYhcLGDn----EnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDN----ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred ccchhccccCcccccccCCC----CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 99999998866655433211 12345566666666666677889999987665443
No 485
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=93.10 E-value=0.23 Score=55.50 Aligned_cols=81 Identities=20% Similarity=0.190 Sum_probs=47.5
Q ss_pred Cccccceeee-ccCCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHHH--HHHHH--hCCccccCCCCCcEEEee
Q 004234 395 DYVKVPTIFW-EYTTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVESY--LEQIL--SHGFFHADPHPGNIAVDD 469 (766)
Q Consensus 395 ~~V~vP~v~~-e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~~--l~qI~--~~GffHaDpHPGNILV~~ 469 (766)
+..--|.++. .-+--.|++|++ .|.+|..+... +.+++.. .+..+ +-.+. ..-|=|+|+|-+||+++
T Consensus 285 ~~~e~~~vv~~de~~y~yl~~kd-hgt~is~ik~~-----~~~e~ls-ff~s~~sil~~lekkf~fehrnlt~~niLId- 356 (488)
T COG5072 285 VFLETLKVVSLDETLYLYLHFKD-HGTPISIIKAD-----RSEEELS-FFWSCISILDILEKKFPFEHRNLTLDNILID- 356 (488)
T ss_pred hhhhcceEEecCCceEEEEEEec-CCceeeeeecc-----cHHHHHH-HHHHHHHHHhhhhhcCCcccccccccceeee-
Confidence 3445566665 222234677776 36666543211 1122211 12222 12222 35688999999999997
Q ss_pred cCCCcEEEEeecceec
Q 004234 470 VNGGRLIFYDFGMMGS 485 (766)
Q Consensus 470 ~~~g~l~LiDFGlv~~ 485 (766)
+|+|.||||-+++.
T Consensus 357 --~GnvtLIDfklsRl 370 (488)
T COG5072 357 --EGNVTLIDFKLSRL 370 (488)
T ss_pred --cCceEEEEeeeeec
Confidence 79999999999984
No 486
>COG4857 Predicted kinase [General function prediction only]
Probab=92.92 E-value=0.4 Score=51.72 Aligned_cols=49 Identities=20% Similarity=0.421 Sum_probs=35.4
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEe--ecceeccChhhHHHHHHHHHHHhh
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYD--FGMMGSISPNIREGLLEAFYGIYE 503 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiD--FGlv~~L~~~~r~~l~~l~~a~~~ 503 (766)
..-.+|+|+|.|.|++++ ...++|| |...|.+.-+.-.-++.++.....
T Consensus 227 aetLiHGDLHsGSIfvte---~etkvIDPEFaFYGPmafDiG~~iaNl~~~~~s 277 (408)
T COG4857 227 AETLIHGDLHSGSIFVTE---KETKVIDPEFAFYGPMAFDIGMLIANLWMSLFS 277 (408)
T ss_pred hHHHhccccccCcEEeec---CcceeeCccccccCcchhhHHHHHHHHHHHHHh
Confidence 456899999999999984 4567777 777777766655556666665443
No 487
>PTZ00384 choline kinase; Provisional
Probab=92.48 E-value=1.7 Score=49.27 Aligned_cols=32 Identities=28% Similarity=0.217 Sum_probs=26.5
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccC
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS 487 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~ 487 (766)
..+-|-|+++|||+.. ++.+.+|||=.++.=+
T Consensus 227 ~VfCHNDL~~gNIL~~---~~~l~lID~EYA~~n~ 258 (383)
T PTZ00384 227 VLFCHNDLFFTNILDF---NQGIYFIDFDFAGFNY 258 (383)
T ss_pred eeeeeccCCcccEEec---CCCEEEEEeccccCCc
Confidence 5789999999999975 5679999998777543
No 488
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=92.15 E-value=0.39 Score=48.89 Aligned_cols=86 Identities=21% Similarity=0.268 Sum_probs=54.4
Q ss_pred ccceeeeccCCCeEEEEeecCCCChhhh----hhhhhc-CCCHHHHHHHHHHHHHHHHHh---CCccccCCCCCcEEEee
Q 004234 398 KVPTIFWEYTTPQILTMEYVPGIKINRI----QSLDEL-GVDRKRLGRYAVESYLEQILS---HGFFHADPHPGNIAVDD 469 (766)
Q Consensus 398 ~vP~v~~e~st~~vLVMEyieG~~L~d~----~~l~~~-g~d~~~la~~lv~~~l~qI~~---~GffHaDpHPGNILV~~ 469 (766)
.+|+++. .|+ +++++||+..+++... ...... -..+.++|..+++.. +.+.. ..|.-+|.+|+|+-+++
T Consensus 21 ~~pk~lG-~CG-~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l-~~l~~~~~~~~~lcDv~~~nfgv~~ 97 (188)
T PF12260_consen 21 PFPKLLG-SCG-RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELL-EELDHGPLGFFYLCDVSPDNFGVND 97 (188)
T ss_pred CCCCeee-ECC-CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHH-HHHhcCCCCcEEEeecchHHeEEeC
Confidence 7899985 344 5779999997755321 111111 112334444444432 22222 34778999999999986
Q ss_pred cCCCcEEEEeecceeccCh
Q 004234 470 VNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 470 ~~~g~l~LiDFGlv~~L~~ 488 (766)
+|+++++|...+...+.
T Consensus 98 --~~~lk~iDld~v~~~~~ 114 (188)
T PF12260_consen 98 --DGRLKLIDLDDVFVEDK 114 (188)
T ss_pred --CCcEEEEechhcchhHH
Confidence 88999999988876644
No 489
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=91.71 E-value=0.12 Score=55.68 Aligned_cols=31 Identities=26% Similarity=0.343 Sum_probs=26.5
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceec
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGS 485 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~ 485 (766)
..|++|+|+|++||+++ ++.+.++||+.+..
T Consensus 186 ~~~liHgD~~~~Nil~~---~~~i~lIDfd~~~~ 216 (313)
T TIGR02906 186 IRGFCHQDYAYHNILLK---DNEVYVIDFDYCTI 216 (313)
T ss_pred cCceEcCCCCcccEEEe---CCcEEEEECccccc
Confidence 46899999999999997 36789999997664
No 490
>PTZ00296 choline kinase; Provisional
Probab=91.64 E-value=2.2 Score=49.28 Aligned_cols=32 Identities=28% Similarity=0.241 Sum_probs=26.5
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
.+-|.|+.++||+.. ++.+.||||=.++.=++
T Consensus 285 VfCHNDl~~~NiL~~---~~~l~LIDfEYAg~ndp 316 (442)
T PTZ00296 285 VFCHNDLQENNIINT---NKCLRLIDFEYSGYNFL 316 (442)
T ss_pred eEEeCCCCccceeec---CCCEEEEeecccccccH
Confidence 578999999999875 45599999988886544
No 491
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=91.21 E-value=3.8 Score=46.95 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=25.8
Q ss_pred ccccCCCCCcEEEeecCCCc---EEEEeecceeccCh
Q 004234 455 FFHADPHPGNIAVDDVNGGR---LIFYDFGMMGSISP 488 (766)
Q Consensus 455 ffHaDpHPGNILV~~~~~g~---l~LiDFGlv~~L~~ 488 (766)
++|+|+...|||.+..++|+ -.||||=++..-++
T Consensus 270 L~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~ 306 (414)
T PF07914_consen 270 LVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSP 306 (414)
T ss_pred eecCCccHHheeeecCCchhHHHHHHHHHHHhhcCch
Confidence 68999999999998644543 45888877766554
No 492
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=90.20 E-value=0.22 Score=50.76 Aligned_cols=38 Identities=24% Similarity=0.253 Sum_probs=30.5
Q ss_pred hCCccccCCCCCcEEEeecCCC---cEEEEeecceeccChh
Q 004234 452 SHGFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISPN 489 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g---~l~LiDFGlv~~L~~~ 489 (766)
...+.|+|+|++||++...++| .+.++||..++.-++.
T Consensus 119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~ 159 (196)
T smart00587 119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPA 159 (196)
T ss_pred ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChH
Confidence 3578999999999999752233 6999999999987764
No 493
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=89.03 E-value=0.064 Score=64.01 Aligned_cols=119 Identities=22% Similarity=0.253 Sum_probs=71.2
Q ss_pred cCCCeEEEEeecCCCChhhhh-hhhhcCCCHHHHHHHHHH--HHHHHHH-hCCccccCCCCCcEEEeecCCC-cEEEEee
Q 004234 406 YTTPQILTMEYVPGIKINRIQ-SLDELGVDRKRLGRYAVE--SYLEQIL-SHGFFHADPHPGNIAVDDVNGG-RLIFYDF 480 (766)
Q Consensus 406 ~st~~vLVMEyieG~~L~d~~-~l~~~g~d~~~la~~lv~--~~l~qI~-~~GffHaDpHPGNILV~~~~~g-~l~LiDF 480 (766)
.....++.+||.+|..+.+.. .-+..+.+........-+ .-+..+| ..|+.|+|++|.|.+++. .+ .++..||
T Consensus 92 ~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--s~~~l~~~df 169 (601)
T KOG0590|consen 92 SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--SGSALKIADF 169 (601)
T ss_pred CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc--CCCcccCCCc
Confidence 456679999999999887754 222112222111111111 2244456 779999999999999986 66 8999999
Q ss_pred cceeccCh-hhHHHHHHHHHHHhhcCHHHHHHHHHHc-CCCCCCCCHHHHH
Q 004234 481 GMMGSISP-NIREGLLEAFYGIYEKDADKVLQAMVQM-GVLVPTGDTTAVR 529 (766)
Q Consensus 481 Glv~~L~~-~~r~~l~~l~~a~~~~D~~~v~~~l~~l-G~~~~~~D~~~l~ 529 (766)
|++..+.. .........-.+ .++.+++++...- +...+..|.+...
T Consensus 170 ~~At~~~~~~g~~~~~~~~~g---~s~~y~a~E~~~~~~~~~~~~d~~S~g 217 (601)
T KOG0590|consen 170 GLATAYRNKNGAERSLKDRCG---SSPPYGAPEHLSGKAYRGPSVDVWSLG 217 (601)
T ss_pred hhhccccccCCcceeeecccC---CCCCCCCcccccchhhcCCCccccccc
Confidence 99998876 333222221111 2666666665543 3334445554433
No 494
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=88.27 E-value=0.75 Score=49.30 Aligned_cols=35 Identities=26% Similarity=0.349 Sum_probs=29.3
Q ss_pred CccccCCCCCcEEEeecCCC---cEEEEeecceeccCh
Q 004234 454 GFFHADPHPGNIAVDDVNGG---RLIFYDFGMMGSISP 488 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g---~l~LiDFGlv~~L~~ 488 (766)
-+.|+|+|++|||+...++| .++++||-+++.-++
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p 253 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSP 253 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeeccccccCCCc
Confidence 47999999999999863344 799999999987766
No 495
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=87.98 E-value=0.24 Score=50.66 Aligned_cols=35 Identities=31% Similarity=0.562 Sum_probs=23.1
Q ss_pred CCccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 453 HGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 453 ~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
..+-|.|++||||++.. .++++.||||-.++.-++
T Consensus 143 ~v~cHnDl~~~Nil~~~-~~~~~~lIDfEya~~n~~ 177 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINN-KDGEVKLIDFEYAGYNDR 177 (211)
T ss_dssp EEEE-S--SGGGEEETS-SSSCEEE--GTT-EEEEH
T ss_pred ceEeeccCccccEEecc-CCCeEEEecHHHHhhccc
Confidence 46889999999999932 378999999999887544
No 496
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=84.51 E-value=0.71 Score=49.67 Aligned_cols=33 Identities=33% Similarity=0.553 Sum_probs=28.6
Q ss_pred CccccCCCCCcEEEeecCCCcEEEEeecceeccCh
Q 004234 454 GFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISP 488 (766)
Q Consensus 454 GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L~~ 488 (766)
-+.|+|++|+|++.++ .|++.||||=-++.=++
T Consensus 154 v~cH~Dl~~~N~l~t~--~~~l~LIDWEyAg~~D~ 186 (269)
T COG0510 154 VPCHNDLNPGNLLLTD--KGGLFLIDWEYAGLNDP 186 (269)
T ss_pred eeecCCCCccceEEcC--CCcEEEEecccCCCccH
Confidence 5899999999999984 69999999988886554
No 497
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=83.22 E-value=0.62 Score=50.63 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=28.4
Q ss_pred hCCccccCCCCCcEEEeecCCCcEEEEeecceecc
Q 004234 452 SHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSI 486 (766)
Q Consensus 452 ~~GffHaDpHPGNILV~~~~~g~l~LiDFGlv~~L 486 (766)
..|++|+|++++|+++++ ++.+.++||-.+..=
T Consensus 195 ~~~lcHgD~~~~Nvl~~~--~~~~~iIDfd~~~~d 227 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDE--TRGGYFINFEKASFA 227 (309)
T ss_pred ceeeeCCCCcHHhEEEcC--CCCEEEEEhhhcccC
Confidence 458999999999999975 778999999988753
No 498
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=82.99 E-value=3 Score=48.62 Aligned_cols=124 Identities=17% Similarity=0.115 Sum_probs=76.8
Q ss_pred CCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHHH--HHHHHHhC-CccccCCCCCcEEEeecCCCcEEEEeeccee
Q 004234 408 TPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVES--YLEQILSH-GFFHADPHPGNIAVDDVNGGRLIFYDFGMMG 484 (766)
Q Consensus 408 t~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~~--~l~qI~~~-GffHaDpHPGNILV~~~~~g~l~LiDFGlv~ 484 (766)
...+.+.+||.-++|.|+......+.|.......+-+. -+..+|.- ..+|+-+++.|.+++. .-.+++.|||+-.
T Consensus 20 ~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~--~w~lklt~~Gl~~ 97 (484)
T KOG1023|consen 20 PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDS--RWVLKLTDFGLNS 97 (484)
T ss_pred CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeee--eEEEEechhhhcc
Confidence 45678899999999999876655566654433333222 35556643 3499999999999986 7789999999998
Q ss_pred ccChhh-HHHHHHHHHHHhhcCHHHHHHHHHHcC-------CCCCCCCHHHHHHHHHHHHHH
Q 004234 485 SISPNI-REGLLEAFYGIYEKDADKVLQAMVQMG-------VLVPTGDTTAVRRTAQFFLNS 538 (766)
Q Consensus 485 ~L~~~~-r~~l~~l~~a~~~~D~~~v~~~l~~lG-------~~~~~~D~~~l~~~i~~~l~~ 538 (766)
...+.. ....... ..+.=..+++++... ..+..+|.+++.-.+++++.+
T Consensus 98 ~~~~~~~~~~~~~~-----~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 98 LLEETAEPEAHHPI-----RKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred cccccccccccchh-----HHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 874300 0000000 011111223333321 145668999999877776643
No 499
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=78.82 E-value=24 Score=37.46 Aligned_cols=74 Identities=19% Similarity=0.255 Sum_probs=38.2
Q ss_pred CCCeEEEEeecCCCChhhhhhhhhcCCCHHHHHHHHHH-HHHHHHHhC--C----ccccCCCCCcEEEeecC---CCcEE
Q 004234 407 TTPQILTMEYVPGIKINRIQSLDELGVDRKRLGRYAVE-SYLEQILSH--G----FFHADPHPGNIAVDDVN---GGRLI 476 (766)
Q Consensus 407 st~~vLVMEyieG~~L~d~~~l~~~g~d~~~la~~lv~-~~l~qI~~~--G----ffHaDpHPGNILV~~~~---~g~l~ 476 (766)
.....+.|||++|+++.+.......+..-.+.+..+=. ..+..++.. . +-|---+|.||++.+.+ +....
T Consensus 89 ~~~~flimeYv~G~~l~~~~~~~~s~~~~~~~~~~LG~ii~lDi~inN~DRlPl~~~~~~GN~~Nil~~~~~~~~~~~~~ 168 (238)
T cd05124 89 EKAYLLIMEYVPGITLFKMTTHRASEYKGEERLIQLGKIIALDIFINNSDRLPLAIWRNSGNFDNIILKDIPNKNGATED 168 (238)
T ss_pred hhhheeeeeecCCccchhhccccccchhhHHHHHHhhhhheeeeeecCCCCCCccccccCCCcceEEEEcccCcCCCcee
Confidence 34468999999999998865433332222222222111 112222211 1 23334678999998632 23455
Q ss_pred EEee
Q 004234 477 FYDF 480 (766)
Q Consensus 477 LiDF 480 (766)
++|.
T Consensus 169 ~~d~ 172 (238)
T cd05124 169 LIDS 172 (238)
T ss_pred eccc
Confidence 6654
No 500
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=76.99 E-value=2.4 Score=49.71 Aligned_cols=156 Identities=18% Similarity=0.177 Sum_probs=0.0
Q ss_pred CCChhhhhhccCc--ccccc--cceeEEEEEee----cCeeEEEEEec-CCccchHHHHHHHHHHHHHHHhhcCCCCCCc
Q 004234 286 GAPLDDVFERFDV--EPIAA--ASLGQVHRARL----KGEEVVVKVQR-PGLKDLFDIDLKNLRVIAEYLQKIDPKSDGA 356 (766)
Q Consensus 286 G~~~eeiF~~fd~--~PIgs--aSiGQVhrA~l----~G~~VAVKVqr-P~i~~~i~~Dl~il~~la~~l~~~~p~~~~~ 356 (766)
+.+..+.|+..-. ..+|+ |+.|+|+.+.. ++..+|+|.++ |.-...
T Consensus 105 ~S~~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~------------------------- 159 (524)
T KOG0601|consen 105 ASPFDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPL------------------------- 159 (524)
T ss_pred CCCccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcc-------------------------
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccceeeeccCCCeEEEEeecCCCChhhhhhhhhcCCCHH
Q 004234 357 KRDWVAIYDECASVLYQEIDYTQEAANAELFASNFKDMDYVKVPTIFWEYTTPQILTMEYVPGIKINRIQSLDELGVDRK 436 (766)
Q Consensus 357 ~~d~~~i~~E~~~~l~~ElDf~~EA~Nl~~f~~~f~~~~~V~vP~v~~e~st~~vLVMEyieG~~L~d~~~l~~~g~d~~ 436 (766)
+=..-.++..-....-.+...++ -...|+-++..++-+|++. ..+.........-....
T Consensus 160 -------------------~~~~k~~~~~s~~~i~~~~~~v~-~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~ 218 (524)
T KOG0601|consen 160 -------------------DSKRKLREFLSHHKIDSHENPVR-DSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDN 218 (524)
T ss_pred -------------------ccccccchhhcccccCccccccc-cCcccccCCcceeeecccc-chhHHhhhcccccCCch
Q ss_pred HHHHHHHHHHH------HHHHhCCccccCCCCCcEEEeecCC-CcEEEEeecceeccChh
Q 004234 437 RLGRYAVESYL------EQILSHGFFHADPHPGNIAVDDVNG-GRLIFYDFGMMGSISPN 489 (766)
Q Consensus 437 ~la~~lv~~~l------~qI~~~GffHaDpHPGNILV~~~~~-g~l~LiDFGlv~~L~~~ 489 (766)
.+-..+..... .++|..+++|-|++|.||+... + ....+.|||++..+++.
T Consensus 219 ~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~--~~~s~~~~df~~v~~i~~~ 276 (524)
T KOG0601|consen 219 LLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTS--DWTSCKLTDFGLVSKISDG 276 (524)
T ss_pred hhhhHHhhhhhcccccccccCCCcccccccchhheeccc--ccceeecCCcceeEEccCC
Done!