Query 004239
Match_columns 766
No_of_seqs 187 out of 210
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 18:44:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004239.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004239hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ax1_A Serrate RNA effector mo 100.0 3.2E-97 1E-101 790.2 27.0 353 224-580 1-354 (358)
2 2adr_A ADR1; transcription reg 85.1 0.25 8.6E-06 37.5 1.0 41 514-559 17-57 (60)
3 2lv2_A Insulinoma-associated p 84.0 0.62 2.1E-05 40.0 3.0 40 514-558 43-82 (85)
4 1x5w_A Zinc finger protein 64, 83.4 0.5 1.7E-05 37.2 2.0 40 515-559 25-64 (70)
5 1bbo_A Human enhancer-binding 82.9 0.72 2.5E-05 34.5 2.7 40 514-558 16-55 (57)
6 2d9h_A Zinc finger protein 692 82.9 1 3.6E-05 35.9 3.8 43 515-559 23-65 (78)
7 2gqj_A Zinc finger protein KIA 80.7 0.86 2.9E-05 38.7 2.6 27 530-558 54-80 (98)
8 3uk3_C Zinc finger protein 217 79.5 1.7 5.8E-05 32.4 3.7 38 514-556 19-56 (57)
9 1klr_A Zinc finger Y-chromosom 79.5 0.91 3.1E-05 28.8 1.9 26 531-558 3-28 (30)
10 2yt9_A Zinc finger-containing 79.2 1.9 6.5E-05 35.3 4.3 41 515-558 51-91 (95)
11 1paa_A Yeast transcription fac 79.1 1.2 4.2E-05 28.5 2.5 26 530-557 2-27 (30)
12 1znf_A 31ST zinc finger from X 78.6 1.4 4.7E-05 27.6 2.5 23 531-555 2-24 (27)
13 3mjh_B Early endosome antigen 77.3 1 3.4E-05 33.7 1.7 27 530-558 5-31 (34)
14 1sp2_A SP1F2; zinc finger, tra 76.9 1.3 4.6E-05 28.9 2.2 27 530-556 2-28 (31)
15 1x6e_A Zinc finger protein 24; 76.8 1.6 5.4E-05 34.5 2.9 38 514-556 29-66 (72)
16 1zfd_A SWI5; DNA binding motif 76.4 1.5 5.3E-05 28.7 2.4 26 530-555 3-28 (32)
17 2elx_A Zinc finger protein 406 75.9 1.2 4.3E-05 29.6 1.8 27 530-558 7-33 (35)
18 2dlq_A GLI-kruppel family memb 75.3 2.1 7.1E-05 36.6 3.5 40 514-558 81-120 (124)
19 2ct1_A Transcriptional repress 75.0 2.5 8.5E-05 33.7 3.7 27 530-558 45-71 (77)
20 2lce_A B-cell lymphoma 6 prote 75.0 1.8 6.3E-05 34.2 2.9 40 514-558 32-71 (74)
21 1bhi_A CRE-BP1, ATF-2; CRE bin 74.6 1.3 4.5E-05 30.4 1.7 25 530-554 6-30 (38)
22 1ard_A Yeast transcription fac 74.4 1.6 5.6E-05 27.5 2.0 26 530-557 2-27 (29)
23 1va1_A Transcription factor SP 73.9 1.3 4.4E-05 30.6 1.5 25 530-554 8-32 (37)
24 2elo_A Zinc finger protein 406 72.6 1.4 4.7E-05 30.0 1.4 27 530-558 9-35 (37)
25 3iuf_A Zinc finger protein UBI 72.6 1.7 5.8E-05 32.2 2.0 27 530-558 7-33 (48)
26 2drp_A Protein (tramtrack DNA- 72.4 2.6 9E-05 32.4 3.1 26 530-557 40-65 (66)
27 2dlk_A Novel protein; ZF-C2H2 72.3 2.5 8.6E-05 33.5 3.1 40 514-556 24-64 (79)
28 1p7a_A BF3, BKLF, kruppel-like 72.1 2.3 7.9E-05 28.8 2.5 24 530-555 11-34 (37)
29 2m0d_A Zinc finger and BTB dom 71.0 1.7 5.7E-05 27.5 1.4 26 530-557 3-28 (30)
30 2elr_A Zinc finger protein 406 70.3 2.2 7.6E-05 28.6 2.0 26 530-557 9-34 (36)
31 2dmd_A Zinc finger protein 64, 70.3 2.5 8.5E-05 34.7 2.7 39 515-558 52-90 (96)
32 2m0e_A Zinc finger and BTB dom 69.2 1.8 6.3E-05 27.1 1.3 26 530-557 2-27 (29)
33 2elm_A Zinc finger protein 406 69.1 1.3 4.4E-05 30.6 0.6 27 530-558 9-35 (37)
34 1rik_A E6APC1 peptide; E6-bind 69.0 1.9 6.4E-05 27.4 1.4 24 530-555 2-25 (29)
35 2djr_A Zinc finger BED domain- 68.7 2.7 9.3E-05 36.3 2.7 33 529-563 27-66 (76)
36 2ctd_A Zinc finger protein 512 68.4 3.2 0.00011 35.6 3.1 39 514-558 50-88 (96)
37 2cot_A Zinc finger protein 435 67.5 2.3 8E-05 33.9 1.9 39 515-558 34-72 (77)
38 2epa_A Krueppel-like factor 10 67.1 4.2 0.00014 31.8 3.3 36 515-553 35-70 (72)
39 2ct5_A Zinc finger BED domain 67.1 3.2 0.00011 35.6 2.7 34 530-565 29-65 (73)
40 1ubd_C Protein (YY1 zinc finge 67.0 4 0.00014 35.1 3.4 42 515-559 80-121 (124)
41 1a1h_A QGSR zinc finger peptid 67.0 4.7 0.00016 32.5 3.7 39 515-558 50-88 (90)
42 2elv_A Zinc finger protein 406 66.9 2.5 8.6E-05 28.5 1.7 23 530-554 9-31 (36)
43 1rim_A E6APC2 peptide; E6-bind 66.6 3.3 0.00011 27.9 2.3 24 530-555 2-25 (33)
44 1srk_A Zinc finger protein ZFP 66.2 2.6 8.9E-05 28.2 1.7 25 530-556 7-31 (35)
45 2csh_A Zinc finger protein 297 66.0 3.5 0.00012 34.9 2.8 42 515-561 53-94 (110)
46 2gli_A Protein (five-finger GL 65.7 3.3 0.00011 36.9 2.7 41 514-557 114-155 (155)
47 2lvt_A Zinc finger and BTB dom 69.1 1.3 4.4E-05 28.4 0.0 25 531-557 3-27 (29)
48 1x6h_A Transcriptional repress 65.5 4.6 0.00016 32.3 3.3 27 530-558 47-73 (86)
49 2els_A Zinc finger protein 406 65.3 2.4 8.3E-05 28.6 1.4 25 530-556 9-33 (36)
50 2kvg_A Zinc finger and BTB dom 65.2 2.7 9.2E-05 26.8 1.5 23 530-554 3-25 (27)
51 2m0f_A Zinc finger and BTB dom 65.1 2.2 7.6E-05 26.8 1.1 24 530-555 2-25 (29)
52 2eln_A Zinc finger protein 406 64.7 3.3 0.00011 30.4 2.1 25 530-554 9-33 (38)
53 2kvh_A Zinc finger and BTB dom 64.6 3.4 0.00012 26.0 1.9 23 530-554 3-25 (27)
54 1zw8_A Zinc-responsive transcr 64.1 4.3 0.00015 33.0 2.9 27 531-557 2-28 (64)
55 2ab3_A ZNF29; zinc finger prot 64.0 3.5 0.00012 25.9 2.0 25 530-554 2-26 (29)
56 2ep1_A Zinc finger protein 484 64.0 3.8 0.00013 29.2 2.3 26 530-557 12-37 (46)
57 2eom_A ZFP-95, zinc finger pro 63.7 3.4 0.00012 29.7 2.0 25 530-556 12-36 (46)
58 2lvr_A Zinc finger and BTB dom 67.5 1.5 5E-05 28.0 0.0 26 530-557 3-28 (30)
59 1ncs_A Peptide M30F, transcrip 63.5 2.4 8E-05 31.1 1.1 26 530-555 18-43 (47)
60 2elt_A Zinc finger protein 406 63.5 2.8 9.6E-05 28.1 1.4 24 530-555 9-32 (36)
61 2elq_A Zinc finger protein 406 63.3 3.2 0.00011 28.0 1.7 25 530-556 9-33 (36)
62 2en7_A Zinc finger protein 268 63.2 3.5 0.00012 29.0 1.9 24 530-555 12-35 (44)
63 1llm_C Chimera of ZIF23-GCN4; 63.1 7.9 0.00027 31.5 4.4 40 514-558 18-57 (88)
64 2gqj_A Zinc finger protein KIA 62.7 4.5 0.00015 34.2 2.9 36 517-557 14-50 (98)
65 2dlk_A Novel protein; ZF-C2H2 62.6 3.8 0.00013 32.4 2.3 29 530-558 7-35 (79)
66 2emi_A Zinc finger protein 484 62.3 3.3 0.00011 29.6 1.7 26 530-557 12-37 (46)
67 2epx_A Zinc finger protein 28 62.0 4.9 0.00017 28.6 2.6 26 530-557 12-37 (47)
68 2ebt_A Krueppel-like factor 5; 61.7 7.7 0.00026 31.8 4.1 35 515-554 63-97 (100)
69 2epa_A Krueppel-like factor 10 61.6 3.3 0.00011 32.4 1.8 28 530-557 17-44 (72)
70 2eq2_A Zinc finger protein 347 61.5 4 0.00014 29.2 2.0 25 530-556 12-36 (46)
71 2emg_A Zinc finger protein 484 61.5 3.9 0.00013 29.2 2.0 25 530-556 12-36 (46)
72 2eq1_A Zinc finger protein 347 61.2 3.9 0.00013 29.2 1.9 25 530-556 12-36 (46)
73 1f2i_G Fusion of N-terminal 17 60.9 6.8 0.00023 30.6 3.5 35 515-554 37-71 (73)
74 2ept_A Zinc finger protein 32; 60.7 3.2 0.00011 29.0 1.3 25 530-556 10-34 (41)
75 2yrm_A B-cell lymphoma 6 prote 60.6 4.9 0.00017 28.5 2.4 26 530-557 10-35 (43)
76 2en9_A Zinc finger protein 28 60.4 4.3 0.00015 29.1 2.0 24 530-555 12-35 (46)
77 2epu_A Zinc finger protein 32; 60.2 2.9 0.0001 29.9 1.1 25 530-556 12-36 (45)
78 2kmk_A Zinc finger protein GFI 60.1 8 0.00027 30.4 3.8 36 515-555 45-80 (82)
79 2kvf_A Zinc finger and BTB dom 60.0 4.4 0.00015 25.5 1.8 23 530-554 3-25 (28)
80 2eoh_A Zinc finger protein 28 59.9 4.2 0.00014 29.2 1.9 24 530-555 12-35 (46)
81 1yui_A GAGA-factor; complex (D 59.9 3.6 0.00012 30.9 1.6 36 518-558 15-50 (54)
82 2eoz_A Zinc finger protein 473 59.9 3 0.0001 29.9 1.1 26 530-557 12-37 (46)
83 2ebt_A Krueppel-like factor 5; 59.8 6 0.00021 32.5 3.1 41 514-557 32-72 (100)
84 2enf_A Zinc finger protein 347 59.7 4.7 0.00016 28.8 2.1 24 530-555 12-35 (46)
85 2j7j_A Transcription factor II 59.6 7.2 0.00025 30.8 3.5 25 530-554 31-55 (85)
86 2enh_A Zinc finger protein 28 59.4 4.1 0.00014 29.2 1.8 24 530-555 12-35 (46)
87 2yth_A Zinc finger protein 224 59.4 5 0.00017 28.7 2.3 24 530-555 12-35 (46)
88 2ytr_A Zinc finger protein 347 59.1 4.7 0.00016 28.7 2.1 24 530-555 12-35 (46)
89 2ct1_A Transcriptional repress 59.1 3.9 0.00013 32.6 1.8 27 530-558 15-41 (77)
90 2eop_A Zinc finger protein 268 59.1 4.8 0.00016 28.6 2.1 24 530-555 12-35 (46)
91 2ytp_A Zinc finger protein 484 58.9 3.6 0.00012 29.5 1.4 25 530-556 12-36 (46)
92 2ee8_A Protein ODD-skipped-rel 58.8 5.2 0.00018 33.4 2.6 27 530-558 73-99 (106)
93 2ytt_A Zinc finger protein 473 58.8 4.1 0.00014 29.2 1.7 23 530-554 12-34 (46)
94 2emk_A Zinc finger protein 28 58.7 4.8 0.00017 28.8 2.1 24 530-555 12-35 (46)
95 2el5_A Zinc finger protein 268 58.7 4.1 0.00014 28.4 1.7 26 530-557 10-35 (42)
96 2epz_A Zinc finger protein 28 58.7 4.9 0.00017 28.7 2.1 25 530-556 12-36 (46)
97 1wjp_A Zinc finger protein 295 58.6 6 0.0002 33.4 2.9 27 530-558 69-95 (107)
98 2epv_A Zinc finger protein 268 58.5 4.3 0.00015 28.9 1.7 25 530-556 12-36 (44)
99 2yte_A Zinc finger protein 473 58.2 5 0.00017 27.9 2.0 23 530-554 10-32 (42)
100 2em6_A Zinc finger protein 224 58.2 4.9 0.00017 28.8 2.0 24 530-555 12-35 (46)
101 2ep3_A Zinc finger protein 484 58.1 4 0.00014 29.1 1.5 24 530-555 12-35 (46)
102 2eq4_A Zinc finger protein 224 58.1 4.8 0.00016 28.7 1.9 25 530-556 12-36 (46)
103 2ytf_A Zinc finger protein 268 58.0 3.9 0.00013 29.1 1.4 26 530-557 12-37 (46)
104 2eos_A B-cell lymphoma 6 prote 57.9 4.4 0.00015 28.4 1.7 26 530-557 11-36 (42)
105 2kmk_A Zinc finger protein GFI 57.9 6.4 0.00022 31.0 2.8 39 515-558 17-55 (82)
106 2yrj_A Zinc finger protein 473 57.8 3.9 0.00013 29.1 1.4 25 530-556 12-36 (46)
107 2eov_A Zinc finger protein 484 57.8 5.1 0.00018 28.5 2.1 25 530-556 12-36 (46)
108 1njq_A Superman protein; zinc- 57.3 4.1 0.00014 28.1 1.5 26 530-557 6-31 (39)
109 2eou_A Zinc finger protein 473 57.3 5.4 0.00019 28.3 2.1 24 530-555 12-35 (44)
110 2ee8_A Protein ODD-skipped-rel 57.3 7.6 0.00026 32.4 3.4 39 515-558 33-71 (106)
111 2em4_A Zinc finger protein 28 57.2 4.3 0.00015 29.1 1.5 25 530-556 12-36 (46)
112 2yti_A Zinc finger protein 347 57.0 5.1 0.00018 28.6 2.0 24 530-555 12-35 (46)
113 2ytq_A Zinc finger protein 268 57.0 5.2 0.00018 28.6 2.0 24 530-555 12-35 (46)
114 2eon_A ZFP-95, zinc finger pro 57.0 4.5 0.00015 29.1 1.7 23 530-554 12-34 (46)
115 2em3_A Zinc finger protein 28 57.0 4.1 0.00014 29.1 1.4 25 530-556 12-36 (46)
116 2eq3_A Zinc finger protein 347 56.9 3.8 0.00013 29.2 1.2 24 530-555 12-35 (46)
117 2epc_A Zinc finger protein 32; 56.5 4.3 0.00015 28.2 1.4 24 530-555 11-34 (42)
118 2rpc_A Zinc finger protein ZIC 56.4 4.2 0.00014 36.4 1.7 41 515-558 108-148 (155)
119 2csh_A Zinc finger protein 297 56.4 6.3 0.00022 33.2 2.7 40 514-558 24-63 (110)
120 2yt9_A Zinc finger-containing 56.3 6.4 0.00022 32.1 2.7 39 515-558 23-61 (95)
121 2eml_A Zinc finger protein 28 56.1 4.9 0.00017 28.7 1.7 26 530-557 12-37 (46)
122 2ytn_A Zinc finger protein 347 55.9 5.6 0.00019 28.4 2.0 25 530-556 12-36 (46)
123 2em0_A Zinc finger protein 224 55.9 6 0.00021 28.2 2.2 24 530-555 12-35 (46)
124 2emj_A Zinc finger protein 28 55.7 4.8 0.00016 28.8 1.6 24 530-555 12-35 (46)
125 2eof_A Zinc finger protein 268 55.7 4.8 0.00017 28.2 1.6 24 530-555 12-35 (44)
126 2emf_A Zinc finger protein 484 55.6 4.6 0.00016 28.9 1.5 25 530-556 12-36 (46)
127 2eow_A Zinc finger protein 347 55.6 4.6 0.00016 28.8 1.5 25 530-556 12-36 (46)
128 2emm_A ZFP-95, zinc finger pro 55.4 4.6 0.00016 28.7 1.5 25 530-556 12-36 (46)
129 2eps_A POZ-, at HOOK-, and zin 55.3 5.9 0.0002 29.7 2.1 26 530-557 12-37 (54)
130 2elz_A Zinc finger protein 224 55.2 5.8 0.0002 28.4 2.0 24 530-555 12-35 (46)
131 2elp_A Zinc finger protein 406 55.2 3.9 0.00013 27.7 1.0 23 530-554 9-32 (37)
132 2yto_A Zinc finger protein 484 55.1 4.6 0.00016 28.9 1.4 24 530-555 12-35 (46)
133 2emy_A Zinc finger protein 268 54.9 5 0.00017 28.6 1.6 25 530-556 12-36 (46)
134 2em5_A ZFP-95, zinc finger pro 54.7 4.7 0.00016 28.9 1.4 23 530-554 12-34 (46)
135 1x3c_A Zinc finger protein 292 54.6 7.7 0.00026 33.5 2.9 28 530-557 27-54 (73)
136 2yts_A Zinc finger protein 484 54.4 4.9 0.00017 28.6 1.5 23 530-554 12-34 (46)
137 2em7_A Zinc finger protein 224 54.4 5.3 0.00018 28.5 1.7 25 530-556 12-36 (46)
138 2eor_A Zinc finger protein 224 54.3 4 0.00014 29.1 1.0 23 530-554 12-34 (46)
139 2ep0_A Zinc finger protein 28 54.2 4.9 0.00017 28.7 1.5 24 530-555 12-35 (46)
140 2ytb_A Zinc finger protein 32; 54.2 4.1 0.00014 28.3 1.0 24 530-555 11-34 (42)
141 2dmd_A Zinc finger protein 64, 54.0 5.4 0.00019 32.6 1.9 39 515-558 24-62 (96)
142 2ene_A Zinc finger protein 347 54.0 4.8 0.00017 28.7 1.4 24 530-555 12-35 (46)
143 2emx_A Zinc finger protein 268 53.9 5.1 0.00017 28.3 1.5 24 530-555 10-33 (44)
144 2el4_A Zinc finger protein 268 53.9 4.9 0.00017 28.6 1.4 24 530-555 12-35 (46)
145 2el6_A Zinc finger protein 268 53.7 5.7 0.00019 28.4 1.7 25 530-556 12-36 (46)
146 2ytj_A Zinc finger protein 484 53.6 5.1 0.00017 28.6 1.5 24 530-555 12-35 (46)
147 2ema_A Zinc finger protein 347 53.6 5.1 0.00017 28.6 1.4 24 530-555 12-35 (46)
148 2eoj_A Zinc finger protein 268 53.5 4.8 0.00016 28.3 1.3 24 530-555 12-35 (44)
149 2lt7_A Transcriptional regulat 53.4 8.4 0.00029 35.1 3.2 39 515-558 66-104 (133)
150 2eoq_A Zinc finger protein 224 53.3 6.4 0.00022 28.0 2.0 24 530-555 12-35 (46)
151 2eq0_A Zinc finger protein 347 53.2 5 0.00017 28.6 1.4 25 530-556 12-36 (46)
152 2j7j_A Transcription factor II 53.1 12 0.00041 29.5 3.7 26 531-556 59-85 (85)
153 2jp9_A Wilms tumor 1; DNA bind 53.0 8.2 0.00028 32.6 2.9 36 514-554 53-88 (119)
154 2ytk_A Zinc finger protein 347 53.0 5.5 0.00019 28.4 1.5 25 530-556 12-36 (46)
155 2emh_A Zinc finger protein 484 52.8 4.4 0.00015 28.9 1.0 23 530-554 12-34 (46)
156 2ytm_A Zinc finger protein 28 52.8 5.5 0.00019 28.6 1.5 23 530-554 12-34 (46)
157 2epq_A POZ-, at HOOK-, and zin 52.8 5.2 0.00018 28.5 1.4 26 530-557 10-35 (45)
158 1a1h_A QGSR zinc finger peptid 52.8 7.7 0.00026 31.2 2.6 39 514-557 21-59 (90)
159 3uk3_C Zinc finger protein 217 52.6 5.5 0.00019 29.5 1.5 24 530-555 4-27 (57)
160 1f2i_G Fusion of N-terminal 17 52.5 4.6 0.00016 31.6 1.2 26 530-555 19-44 (73)
161 2emp_A Zinc finger protein 347 52.4 4.5 0.00015 28.9 1.0 23 530-554 12-34 (46)
162 2emz_A ZFP-95, zinc finger pro 52.4 7.2 0.00025 27.9 2.1 23 530-554 12-34 (46)
163 1bbo_A Human enhancer-binding 52.4 6.9 0.00024 28.9 2.1 25 531-557 2-26 (57)
164 2en6_A Zinc finger protein 268 52.4 4.8 0.00016 28.7 1.1 25 530-556 12-36 (46)
165 2eme_A Zinc finger protein 473 52.3 6.1 0.00021 28.1 1.7 24 530-555 12-35 (46)
166 2en3_A ZFP-95, zinc finger pro 52.2 4.7 0.00016 28.8 1.1 23 530-554 12-34 (46)
167 2wbt_A B-129; zinc finger; 2.7 52.2 4.9 0.00017 35.0 1.4 28 530-559 100-127 (129)
168 2em9_A Zinc finger protein 224 52.1 5.8 0.0002 28.2 1.5 24 530-555 12-35 (46)
169 2wbs_A Krueppel-like factor 4; 51.9 12 0.0004 30.0 3.5 35 515-554 53-87 (89)
170 2ely_A Zinc finger protein 224 51.8 6.8 0.00023 28.0 1.9 24 530-555 12-35 (46)
171 2eoe_A Zinc finger protein 347 51.7 6.1 0.00021 28.1 1.6 25 530-556 12-36 (46)
172 2dmi_A Teashirt homolog 3; zin 51.5 8 0.00027 32.8 2.6 27 530-558 80-106 (115)
173 2yu5_A Zinc finger protein 473 51.3 5.3 0.00018 28.2 1.2 25 530-556 12-36 (44)
174 2emb_A Zinc finger protein 473 50.9 6.1 0.00021 27.9 1.5 24 530-555 12-35 (44)
175 2em2_A Zinc finger protein 28 50.9 5.9 0.0002 28.3 1.4 25 530-556 12-36 (46)
176 2ep2_A Zinc finger protein 484 50.8 6.1 0.00021 28.2 1.5 25 530-556 12-36 (46)
177 2drp_A Protein (tramtrack DNA- 50.7 7.5 0.00026 29.7 2.1 25 530-556 10-34 (66)
178 2lvu_A Zinc finger and BTB dom 56.2 3.3 0.00011 25.8 0.0 23 530-554 2-24 (26)
179 4gzn_C ZFP-57, zinc finger pro 49.8 11 0.00038 30.1 3.1 38 514-557 19-56 (60)
180 2eoo_A ZFP-95, zinc finger pro 49.8 6.1 0.00021 28.2 1.4 23 530-554 12-34 (46)
181 2adr_A ADR1; transcription reg 49.8 7.9 0.00027 29.0 2.1 25 530-556 2-26 (60)
182 2ent_A Krueppel-like factor 15 49.7 6.3 0.00022 28.2 1.4 25 530-554 12-36 (48)
183 2wbs_A Krueppel-like factor 4; 49.2 7.1 0.00024 31.3 1.8 25 530-554 5-29 (89)
184 2eoy_A Zinc finger protein 473 49.0 6.4 0.00022 28.2 1.3 23 530-554 12-34 (46)
185 2jp9_A Wilms tumor 1; DNA bind 48.9 15 0.0005 31.0 3.9 38 514-554 81-118 (119)
186 2en8_A Zinc finger protein 224 48.9 6.5 0.00022 27.9 1.4 24 530-555 12-35 (46)
187 2ysp_A Zinc finger protein 224 48.3 5.7 0.00019 28.3 1.0 24 530-555 12-35 (46)
188 2eox_A Zinc finger protein 473 48.2 3.6 0.00012 29.1 -0.1 25 530-556 12-36 (44)
189 2yso_A ZFP-95, zinc finger pro 48.1 7 0.00024 27.8 1.5 24 530-555 12-35 (46)
190 1zw8_A Zinc-responsive transcr 48.1 16 0.00055 29.6 3.8 28 529-556 37-64 (64)
191 2lce_A B-cell lymphoma 6 prote 47.4 8.7 0.0003 30.2 2.0 26 530-557 17-42 (74)
192 2en1_A Zinc finger protein 224 47.3 6.6 0.00022 28.0 1.2 25 530-556 12-36 (46)
193 2ytd_A Zinc finger protein 473 46.7 7.5 0.00026 27.7 1.4 23 530-554 12-34 (46)
194 2rpc_A Zinc finger protein ZIC 46.5 12 0.0004 33.4 3.0 40 516-558 79-118 (155)
195 2ytg_A ZFP-95, zinc finger pro 45.5 5.2 0.00018 28.5 0.4 25 530-556 12-36 (46)
196 2em8_A Zinc finger protein 224 45.3 6.7 0.00023 28.0 1.0 23 530-554 12-34 (46)
197 2enc_A Zinc finger protein 224 45.3 8 0.00028 27.5 1.4 23 530-554 12-34 (46)
198 1ubd_C Protein (YY1 zinc finge 45.3 8.9 0.00031 32.8 1.9 27 530-556 62-88 (124)
199 1x5w_A Zinc finger protein 64, 44.9 8.9 0.0003 29.8 1.7 26 530-557 9-34 (70)
200 2epw_A Zinc finger protein 268 44.8 7.7 0.00026 27.5 1.2 23 530-554 12-34 (46)
201 2epr_A POZ-, at HOOK-, and zin 44.8 7 0.00024 28.4 1.0 25 530-556 12-36 (48)
202 2en2_A B-cell lymphoma 6 prote 44.4 6.3 0.00021 27.4 0.7 23 530-554 11-33 (42)
203 1x6h_A Transcriptional repress 44.4 9.1 0.00031 30.5 1.7 27 530-558 15-41 (86)
204 2i13_A AART; DNA binding, zinc 44.2 15 0.00051 34.0 3.4 40 514-558 148-187 (190)
205 1x6e_A Zinc finger protein 24; 44.0 8.7 0.0003 30.1 1.5 25 530-556 14-38 (72)
206 2lv2_A Insulinoma-associated p 42.9 8.9 0.00031 32.7 1.5 27 530-558 28-54 (85)
207 3foz_A TRNA delta(2)-isopenten 42.5 22 0.00076 37.9 4.8 48 225-273 248-295 (316)
208 2dlq_A GLI-kruppel family memb 42.2 23 0.00078 29.9 4.0 26 530-557 66-91 (124)
209 2epp_A POZ-, at HOOK-, and zin 42.2 14 0.00048 30.4 2.5 26 530-557 13-38 (66)
210 2jsp_A Transcriptional regulat 42.1 9.5 0.00033 33.9 1.6 32 529-565 20-51 (87)
211 2gli_A Protein (five-finger GL 41.8 19 0.00066 31.8 3.6 28 530-557 97-124 (155)
212 2ghf_A ZHX1, zinc fingers and 40.3 15 0.0005 32.4 2.5 26 530-557 50-75 (102)
213 2ej4_A Zinc finger protein ZIC 40.0 16 0.00055 29.7 2.6 27 530-558 25-51 (95)
214 2ctd_A Zinc finger protein 512 39.6 20 0.00069 30.5 3.3 23 530-554 34-57 (96)
215 2yu8_A Zinc finger protein 347 39.1 8.1 0.00028 27.5 0.6 23 530-554 12-34 (46)
216 4i1l_A Scurfin, forkhead box p 37.0 12 0.0004 33.7 1.4 26 532-557 14-39 (93)
217 2ej4_A Zinc finger protein ZIC 36.8 22 0.00076 28.8 3.0 22 531-554 63-84 (95)
218 2cot_A Zinc finger protein 435 36.3 16 0.00055 28.9 2.0 25 530-556 18-42 (77)
219 2d9h_A Zinc finger protein 692 34.8 16 0.00054 28.9 1.7 26 530-557 7-32 (78)
220 2elu_A Zinc finger protein 406 33.1 22 0.00075 26.6 2.0 25 530-556 9-33 (37)
221 3exa_A TRNA delta(2)-isopenten 32.6 91 0.0031 33.3 7.6 49 225-274 240-288 (322)
222 2kfq_A FP1; protein, de novo p 32.5 3.2 0.00011 27.7 -2.4 22 531-554 3-24 (32)
223 1tf6_A Protein (transcription 32.2 32 0.0011 31.8 3.5 38 514-554 121-158 (190)
224 2yrk_A Zinc finger homeobox pr 30.3 18 0.00062 29.7 1.3 30 530-561 13-43 (55)
225 1tf6_A Protein (transcription 30.0 44 0.0015 30.8 4.2 28 530-557 72-99 (190)
226 1zr9_A Zinc finger protein 593 29.9 18 0.00062 33.9 1.4 32 530-563 50-82 (124)
227 2i13_A AART; DNA binding, zinc 29.3 27 0.00093 32.2 2.6 38 515-557 121-158 (190)
228 1llm_C Chimera of ZIF23-GCN4; 27.9 18 0.00061 29.3 1.0 24 530-555 3-26 (88)
229 4dgw_A PRE-mRNA-splicing facto 27.3 68 0.0023 35.3 5.6 25 529-555 291-315 (402)
230 3crm_A TRNA delta(2)-isopenten 26.0 1.1E+02 0.0039 32.3 6.9 49 225-274 254-302 (323)
231 2eod_A TNF receptor-associated 25.5 40 0.0014 25.9 2.5 24 530-554 36-59 (66)
232 1wir_A Protein arginine N-meth 25.4 47 0.0016 30.9 3.4 48 529-578 14-65 (121)
233 2lt7_A Transcriptional regulat 25.1 51 0.0018 29.8 3.6 36 514-554 37-72 (133)
234 1fv5_A First zinc finger of U- 24.4 33 0.0011 24.9 1.7 21 530-552 8-28 (36)
235 2eod_A TNF receptor-associated 23.8 26 0.0009 27.0 1.2 25 530-558 10-34 (66)
236 4gzn_C ZFP-57, zinc finger pro 23.7 35 0.0012 27.1 1.9 23 530-554 4-26 (60)
237 2kw6_A Cyclin-dependent kinase 22.9 33 0.0011 29.1 1.6 19 366-384 36-54 (65)
238 1x6f_A Zinc finger protein 462 21.8 40 0.0014 28.6 2.0 23 530-554 25-47 (88)
239 3d3q_A TRNA delta(2)-isopenten 20.5 59 0.002 34.8 3.4 50 224-274 245-294 (340)
240 2wbt_A B-129; zinc finger; 2.7 20.2 45 0.0015 28.8 2.0 24 530-556 74-97 (129)
No 1
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=100.00 E-value=3.2e-97 Score=790.19 Aligned_cols=353 Identities=78% Similarity=1.202 Sum_probs=285.7
Q ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHhhccCCcchHHHHHHHHHHHHHHHHHHHHH
Q 004239 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLKDKYHPTNLVAVIERRNDLARKVAKDFLLD 303 (766)
Q Consensus 224 ~lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HK~EeWFrEKY~P~~l~~~~erR~E~~~~aak~F~~d 303 (766)
+||||||||++|+|+|||+||+++|++||.+|.++|++.||++||+|+||+|||||+++++++++|++++++.++.|+++
T Consensus 1 glmsFKqFl~~~~D~isp~eA~~~Y~eYk~e~~~~q~~~FF~~HK~e~WfreKY~P~~l~~~~~~R~e~ak~~a~~F~~~ 80 (358)
T 3ax1_A 1 GLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDWLKNKYHPTNLLSVIERRNDLAQKVAKDFLLD 80 (358)
T ss_dssp CCCCHHHHGGGTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCcccccCCCCCCcccccccCCCCCCCCCChhHHHHHHHHHHHHHH
Q 004239 304 LQSGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGPAKETDLLSAAPKAHPISSEPRRIQVDIEQAQALVR 383 (766)
Q Consensus 304 LesG~fD~~pgv~~~~sdksG~~sdpnse~e~~~~~Kr~R~Gwv~~kesD~~s~aPkahPi~S~p~RI~~DLeqAr~LV~ 383 (766)
|++|+||+++++++. +++|.++++++++.++.++|++|+||++.+++|++++||++||+||+|+||++||+||++||+
T Consensus 81 L~~G~ld~~~~~~~~--~~~~~~~~~~~~d~~~~~~k~~~~g~~~~~~~d~~~~ap~~~P~~S~p~RI~~Dle~a~~Lv~ 158 (358)
T 3ax1_A 81 LQSGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAPKAPSFTSDPKRILTDVEQTQALVR 158 (358)
T ss_dssp HHTTCCCCCSBSSCC--C-----------------------------------CCCBCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCccccc--cccCCCCCCChhhhhhccccccccCCCcccccchhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 999999998877774 677878899999888888899999999999999999999999999999999999999999999
Q ss_pred HHhhhccccccccCCCCcccccccccCC-CCCCceeecccccccCcchhhHHHHHHHHHHHHhhcccccccccccccccc
Q 004239 384 KLDSEKGITENILCGSDNDKMNREKSHG-STGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLR 462 (766)
Q Consensus 384 kLDaEkGIe~n~L~~~d~~~~d~dks~~-s~gP~~i~rg~~~v~~le~ik~LDllI~YLRrVHsvDYY~~~E~dercgl~ 462 (766)
+||+|+||++|+|..+++...+.++++. ++||++|++++.++++++.+++||++|+|||+||||||||++||+++||++
T Consensus 159 kLD~e~gie~n~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~LD~~i~YLRrVH~~dYY~~~E~~~~~g~~ 238 (358)
T 3ax1_A 159 KLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLR 238 (358)
T ss_dssp HHHHHHTCCCCTTC---------------CCCCCEEECCSSCCEEECSHHHHHHHHHHHHHHHCEEGGGTEECTTCCSBC
T ss_pred HHHHhhCCcccccccccccccccccccccCCCcchhhccccchhhhhhHHHHHHHHHHHHHHHcccccceEeecCccccC
Confidence 9999999999999998776677777775 789999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCchhhHHHhhHHHHHHHhhcCChhhHhhhhhhHHHHHHHhhhhHHHhhhhcccCcccccCCCCCcccc
Q 004239 463 HVRAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLF 542 (766)
Q Consensus 463 HvR~~~k~~~~~s~~~eW~KklD~~~q~rL~~~dple~l~~kekid~el~e~ve~fVkk~~dEk~g~K~rC~l~gCtKLF 542 (766)
|||++.++.+ .+..+|+++|+++|+.+|+..+|+++++++++|+++++++|++||++++||+|||||+|.+++|+|||
T Consensus 239 HvR~~~~~~~--~~~~~we~~ld~~w~~~l~~~dp~~~~lg~k~ie~~~~e~l~~~v~k~~dE~~gwK~~C~~~~C~KLF 316 (358)
T 3ax1_A 239 HVRAEGKVSD--AKGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLF 316 (358)
T ss_dssp CBC------------CHHHHHHHHHHHHHHHSCCHHHHHHCHHHHHHHHHHHHGGGEEEEECSSSSEEEEECSSSCCCEE
T ss_pred eecCCCCCCC--CchhhHHHHHHHHHHHHHcccChHHHHhcCccHHHHHHHHHHHHHHHHhhcccccccCCCCCCcCccc
Confidence 9999877543 36678999999999999999999998889999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHhhhChHHHHHHHhhHHHHHHHhhhccCC
Q 004239 543 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDP 580 (766)
Q Consensus 543 KgpEFVrKHI~nKH~E~Veev~~kv~E~~yFNNYl~DP 580 (766)
||+|||+|||+|||+|+|++++++|+|.+||+|||.--
T Consensus 317 k~~eFV~KHi~~KH~e~v~~~~~~v~~~~~~~~~~~~~ 354 (358)
T 3ax1_A 317 HAAEFVYKHLKLKHTELVTELTTKVREELYFQNYLEHH 354 (358)
T ss_dssp SSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999643
No 2
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=85.08 E-value=0.25 Score=37.53 Aligned_cols=41 Identities=27% Similarity=0.539 Sum_probs=31.5
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChHH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~ 559 (766)
.|..+++..+.++ .|.|.+ |+|.|.....+.+||...|...
T Consensus 17 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 17 HLKRHYRSHTNEK---PYPCGL--CNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp HHHHHHHTTTSSC---SEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHhCCCC---CccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence 3455666544442 689985 9999999999999999889754
No 3
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=84.01 E-value=0.62 Score=40.03 Aligned_cols=40 Identities=20% Similarity=0.463 Sum_probs=32.8
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++..+.|+ .|.|.. |.|.|.....+.+||+..|++
T Consensus 43 ~L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 43 AQERHLRLLHAAQ---VFPCKY--CPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp HHHHHHHTTSCSS---SEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred HHhhhhhhccCCC---ccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence 4556777666563 699984 999999999999999999975
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=83.36 E-value=0.5 Score=37.17 Aligned_cols=40 Identities=20% Similarity=0.321 Sum_probs=30.1
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChHH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~ 559 (766)
|..+++..+.++ .|.|.+ |.|.|....-+.+|++..|.++
T Consensus 25 L~~H~~~H~~~~---~~~C~~--C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 25 LRIHERIHCTDR---PFKCNY--CSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp HHHHHGGGCCSC---SEECSS--SSCEESSHHHHHHHHHHHHSSS
T ss_pred HHHHHHHcCCCC---CEeCCC--CCCccCCHHHHHHHHHHHhCCC
Confidence 444555544442 599985 9999999999999999887653
No 5
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=82.94 E-value=0.72 Score=34.45 Aligned_cols=40 Identities=28% Similarity=0.457 Sum_probs=30.7
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++..+.++ .|.|.. |+|.|.....+..|+...|.+
T Consensus 16 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 16 MLKKHIRTHTDVR---PYHCTY--CNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp HHHHHHHHTSSCC---CEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred HHHHHHHhcCCCC---CccCCC--CCchhcCHHHHHHHHHHhccc
Confidence 3455666544442 689985 999999999999999988765
No 6
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.90 E-value=1 Score=35.95 Aligned_cols=43 Identities=28% Similarity=0.451 Sum_probs=30.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChHH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~ 559 (766)
|..+++....+.....|.|.+ |+|.|....-+.+|++..|...
T Consensus 23 L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 23 LNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp HHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTT
T ss_pred HHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCC
Confidence 344555444311113799985 9999999999999999999864
No 7
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.67 E-value=0.86 Score=38.69 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=20.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|+...-+.+|++..|.+
T Consensus 54 ~~~C~~--C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQH--CRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSS--SCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCC--CCCccCCHHHHHHHHHHHcCC
Confidence 577874 888888888888888776654
No 8
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=79.53 E-value=1.7 Score=32.35 Aligned_cols=38 Identities=26% Similarity=0.390 Sum_probs=28.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhC
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|..+++..+.++ .|.|.+ |+|.|....-+..|+...|
T Consensus 19 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 19 YLNIHLRTHTGEK---PYKCEF--CEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp HHHHHHHHHHCCC---CEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCC---CcCCCC--CcchhCCHHHHHHHHHHhc
Confidence 3444565554443 589985 9999999999999998877
No 9
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=79.52 E-value=0.91 Score=28.81 Aligned_cols=26 Identities=27% Similarity=0.482 Sum_probs=22.4
Q ss_pred cccCCCCCcccccchhHHHHHHhhhChH
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|.|. .|+|.|.....+..|+..-|.+
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~h~~~ 28 (30)
T 1klr_A 3 YQCQ--YCEFRSADSSNLKTHIKTKHSK 28 (30)
T ss_dssp CCCS--SSSCCCSCSHHHHHHHHHHTSS
T ss_pred ccCC--CCCCccCCHHHHHHHHHHHccC
Confidence 6898 5999999999999999876654
No 10
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=79.25 E-value=1.9 Score=35.32 Aligned_cols=41 Identities=27% Similarity=0.459 Sum_probs=29.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....+. ...|.|.+ |+|.|....-+.+||+..|..
T Consensus 51 l~~H~~~h~~~~-~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 51 MSYHVRSHDGSV-GKPYICQS--CGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHCCCC-CSSBCCSS--SCCCBSSHHHHHHHHHHTSCC
T ss_pred HHHHHHHhcCCC-CCceECCC--ccchhCCHHHHHHHHHHhcCC
Confidence 444555443331 13689985 999999999999999998864
No 11
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=79.08 E-value=1.2 Score=28.46 Aligned_cols=26 Identities=27% Similarity=0.719 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|. .|+|.|.....+..|+...|.
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 2 AYACG--LCNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp CSBCT--TTCCBCSSSHHHHHHHTTTSC
T ss_pred CcCCc--ccCcccCChHHHHHHHHHHcc
Confidence 37897 599999999999999766664
No 12
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=78.56 E-value=1.4 Score=27.61 Aligned_cols=23 Identities=26% Similarity=0.706 Sum_probs=19.8
Q ss_pred cccCCCCCcccccchhHHHHHHhhh
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
|.|. .|+|.|....-+.+|+..-
T Consensus 2 ~~C~--~C~k~f~~~~~l~~H~~~h 24 (27)
T 1znf_A 2 YKCG--LCERSFVEKSALSRHQRVH 24 (27)
T ss_dssp CBCS--SSCCBCSSHHHHHHHGGGT
T ss_pred ccCC--CCCCcCCCHHHHHHHHHHc
Confidence 6787 4999999999999998763
No 13
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=77.28 E-value=1 Score=33.68 Aligned_cols=27 Identities=26% Similarity=0.477 Sum_probs=25.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
-|.|++ |-|-|..++-+.+|-.+||.+
T Consensus 5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 5 GFICPQ--CMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred ccCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence 389995 999999999999999999986
No 14
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=76.91 E-value=1.3 Score=28.91 Aligned_cols=27 Identities=19% Similarity=0.404 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|....|+|.|....-+..|+..-+
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~H~ 28 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRTHT 28 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTTTS
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHHhc
Confidence 367875579999999999999997643
No 15
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=76.76 E-value=1.6 Score=34.54 Aligned_cols=38 Identities=26% Similarity=0.383 Sum_probs=28.2
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhC
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|..+++....++ .|.|.+ |.|.|....-+.+|++.-+
T Consensus 29 ~L~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 29 ILVQHQRVHTGEK---PYKCLE--CGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp HHHHHHHGGGCSC---CEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCC---CeECCC--CCcccCCHHHHHHHHHhcC
Confidence 3445666554443 689985 9999999999999997644
No 16
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=76.39 E-value=1.5 Score=28.73 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|....|+|.|....-+..|+..-
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H 28 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHc
Confidence 47897556999999999999999763
No 17
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=75.87 E-value=1.2 Score=29.62 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=23.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|....-+..|+..-+.|
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~~ 33 (35)
T 2elx_A 7 GYVCAL--CLKKFVSSIRLRSHIREVHGA 33 (35)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHTSCT
T ss_pred CeECCC--CcchhCCHHHHHHHHHHHcCC
Confidence 589984 999999999999999875544
No 18
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=75.33 E-value=2.1 Score=36.55 Aligned_cols=40 Identities=20% Similarity=0.384 Sum_probs=30.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++....++ .|.|.+ |+|.|....-+.+|+.+.|..
T Consensus 81 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 81 ELRLHMVSHTGEM---PYKCSS--CSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp HHHHHHHHHSSSC---SEECSS--SCCEESSHHHHHHHHHHTSSC
T ss_pred HHHHHHHHcCCCC---CccCCC--ccchhCCHHHHHHHHHHHCCC
Confidence 3445665544442 599985 999999999999999999975
No 19
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=75.02 E-value=2.5 Score=33.71 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=24.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.. |+|.|....-+.+|++..|..
T Consensus 45 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 45 KFHCPH--CDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred ccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 689985 999999999999999998864
No 20
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=74.96 E-value=1.8 Score=34.23 Aligned_cols=40 Identities=23% Similarity=0.419 Sum_probs=28.4
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++..+.++ .|.|.+ |+|.|....-+.+|++.-+.|
T Consensus 32 ~l~~H~~~H~~~~---~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 71 (74)
T 2lce_A 32 NLASHKTVHTGEK---PYRCNI--CGAQFNRPANLKTHTRIHSGE 71 (74)
T ss_dssp HHHHHHHHHCCCC---SEECTT--TCCEESCHHHHHHHHHHHCCS
T ss_pred HHHHHHHHcCCCC---CEECCC--CCchhCCHHHHHHHHHhcCCC
Confidence 3445665554442 589984 999999999999998765544
No 21
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=74.62 E-value=1.3 Score=30.35 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+..|+|.|....-+..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 5889866799999999999999875
No 22
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=74.38 E-value=1.6 Score=27.54 Aligned_cols=26 Identities=23% Similarity=0.575 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|. .|+|.|.....+..|+..-+.
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~ 27 (29)
T 1ard_A 2 SFVCE--VCTRAFARQEHLKRHYRSHTN 27 (29)
T ss_dssp CCBCT--TTCCBCSSHHHHHHHHHHHSC
T ss_pred CeECC--CCCcccCCHHHHHHHHHHhcC
Confidence 37898 499999999999999986443
No 23
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=73.92 E-value=1.3 Score=30.63 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+..|+|.|.....+..|+..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 5899766799999999999999875
No 24
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.63 E-value=1.4 Score=29.97 Aligned_cols=27 Identities=37% Similarity=0.891 Sum_probs=23.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.. |+|.|....-+..|+..-+.|
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 35 (37)
T 2elo_A 9 SYSCPV--CEKSFSEDRLIKSHIKTNHPE 35 (37)
T ss_dssp CCEETT--TTEECSSHHHHHHHHHHHCSS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHHHcCC
Confidence 589985 999999999999999875544
No 25
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=72.61 E-value=1.7 Score=32.24 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=23.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|.....+.+|++..|..
T Consensus 7 p~~C~~--C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 7 PYACDI--CGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred CEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence 589985 999999999999999855654
No 26
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=72.37 E-value=2.6 Score=32.36 Aligned_cols=26 Identities=31% Similarity=0.579 Sum_probs=23.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|.....+..|++..|.
T Consensus 40 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCPF--CFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred CeECCC--CCCccCCHHHHHHHHHHHcC
Confidence 689985 99999999999999998874
No 27
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=72.30 E-value=2.5 Score=33.46 Aligned_cols=40 Identities=23% Similarity=0.497 Sum_probs=29.1
Q ss_pred hhhhHHH-hhhhcccCcccccCCCCCcccccchhHHHHHHhhhC
Q 004239 514 ALDPFVR-KIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 514 ~ve~fVk-k~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|..+++ ..+.++ .|.|...+|+|.|....-+..|++.-+
T Consensus 24 ~L~~H~~~~H~~~~---~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 24 YLNHHKKYQHIHQK---SFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp HHHHHHHHGGGSCC---CEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCC---CeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 4455666 344442 689986679999999999999997643
No 28
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=72.10 E-value=2.3 Score=28.80 Aligned_cols=24 Identities=21% Similarity=0.553 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|.....+..|+..-
T Consensus 11 ~~~C~--~C~k~f~~~~~l~~H~~~H 34 (37)
T 1p7a_A 11 PFQCP--DCDRSFSRSDHLALHRKRH 34 (37)
T ss_dssp SBCCT--TTCCCBSSHHHHHHHHGGG
T ss_pred CccCC--CCCcccCcHHHHHHHHHHh
Confidence 58998 5999999999999998764
No 29
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=71.00 E-value=1.7 Score=27.53 Aligned_cols=26 Identities=23% Similarity=0.529 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 3 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 28 (30)
T 2m0d_A 3 PYQCDY--CGRSFSDPTSKMRHLETHDT 28 (30)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHTTCC
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhcc
Confidence 478984 99999999999999976443
No 30
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.30 E-value=2.2 Score=28.61 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 34 (36)
T 2elr_A 9 THLCDM--CGKKFKSKGTLKSHKLLHTA 34 (36)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHHHSS
T ss_pred CeecCc--CCCCcCchHHHHHHHHHhcC
Confidence 589984 99999999999999876443
No 31
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=70.27 E-value=2.5 Score=34.67 Aligned_cols=39 Identities=21% Similarity=0.411 Sum_probs=28.6
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-|.+
T Consensus 52 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 52 LNKHLRIHSDER---PFKCQI--CPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp HHHHHHHSCCCC---CEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred HHHHHHHhCCCC---CccCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 444555544442 589985 999999999999999877665
No 32
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=69.17 E-value=1.8 Score=27.09 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~~ 27 (29)
T 2m0e_A 2 EHKCP--HCDKKFNQVGNLKAHLKIHIA 27 (29)
T ss_dssp CCCCS--SCCCCCCTTTHHHHHHHHHHS
T ss_pred CCcCC--CCCcccCCHHHHHHHHHHhcc
Confidence 37898 499999999999999876443
No 33
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.14 E-value=1.3 Score=30.63 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=22.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|. .|+|.|....-+.+|+...|..
T Consensus 9 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 9 LYYCS--QCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp EEECS--SSSCEEECHHHHHHHHHHHTCC
T ss_pred CeECC--CCCcccCCHHHHHHHHHHHccC
Confidence 58998 5999999999999996566653
No 34
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=69.04 E-value=1.9 Score=27.35 Aligned_cols=24 Identities=29% Similarity=0.694 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|.....+..|+..-
T Consensus 2 ~~~C~--~C~k~f~~~~~l~~H~~~H 25 (29)
T 1rik_A 2 KFACP--ECPKRFMRSDHLTLHILLH 25 (29)
T ss_dssp CEECS--SSSCEESCSHHHHHHHTGG
T ss_pred CccCC--CCCchhCCHHHHHHHHHHh
Confidence 36897 5999999999999999763
No 35
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.71 E-value=2.7 Score=36.32 Aligned_cols=33 Identities=24% Similarity=0.265 Sum_probs=28.0
Q ss_pred cccccCCCCCccccc-------chhHHHHHHhhhChHHHHHH
Q 004239 529 WKYGCGAKGCTKLFH-------AAEFVHKHLKLKHPELVIEL 563 (766)
Q Consensus 529 ~K~rC~l~gCtKLFK-------gpEFVrKHI~nKH~E~Veev 563 (766)
.+..|. .|.|.|. +..=+..||+.+|++.|+..
T Consensus 27 ~~A~Ck--~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~~ 66 (76)
T 2djr_A 27 QYATCR--LCGRQVSRGPGVNVGTTALWKHLKSMHREELEKS 66 (76)
T ss_dssp SCEEES--SSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHHT
T ss_pred CEEECC--CCCCccCCCCCCCCchHHHHHHHHHHCHHHHHhc
Confidence 378998 4999998 67889999999999977654
No 36
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.41 E-value=3.2 Score=35.64 Aligned_cols=39 Identities=15% Similarity=0.360 Sum_probs=29.2
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++.. .|+ .|.|.+ |+|.|+...-+.+||...|.+
T Consensus 50 ~L~~H~~~h-~~k---~~~C~~--Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 50 GLKKHMENC-KQE---MFTCHH--CGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HHHHHHHHH-CCC---CCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred HHHHHHHHH-CCC---CeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence 345566654 342 689985 999999999999997777854
No 37
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.54 E-value=2.3 Score=33.87 Aligned_cols=39 Identities=26% Similarity=0.439 Sum_probs=27.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....++ .|.|.+ |+|.|.....+..|+..-+.+
T Consensus 34 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 34 LSKHRRTHTGEK---PYKCDE--CGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp HHHHHTTTCCSC---SEECSS--SCCEESSHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCCc---CeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 444555444342 589985 999999999999999765443
No 38
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=67.10 E-value=4.2 Score=31.85 Aligned_cols=36 Identities=28% Similarity=0.604 Sum_probs=24.1
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHh
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLK 553 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~ 553 (766)
|..+++..+.++ .|.|.+..|.|.|....-+.+|++
T Consensus 35 L~~H~~~H~~~~---~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 35 LKAHTRTHTGEK---PFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp HHHHHHHHSSSC---SEECCCTTCCCEESSHHHHHHHTT
T ss_pred HHHHHHhcCCCC---CccCCCCCCCcccCCHHHHHhHhh
Confidence 334555444442 578865568888888888888875
No 39
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=67.07 E-value=3.2 Score=35.59 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=27.7
Q ss_pred ccccCCCCCccccc---chhHHHHHHhhhChHHHHHHHh
Q 004239 530 KYGCGAKGCTKLFH---AAEFVHKHLKLKHPELVIELTS 565 (766)
Q Consensus 530 K~rC~l~gCtKLFK---gpEFVrKHI~nKH~E~Veev~~ 565 (766)
+..|.+ |.|+++ +..=+..||+.||++.+.++.+
T Consensus 29 ~a~Ck~--C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~~ 65 (73)
T 2ct5_A 29 KIYCRI--CMAQIAYSGNTSNLSYHLEKNHPEEFCEFVK 65 (73)
T ss_dssp CCEETT--TTEECCCCSSTHHHHHHHHHSCHHHHHHHCC
T ss_pred EEECCC--CCccccCCCChHhHHHHHHHHCHHHHHHHHH
Confidence 678985 999976 5667899999999998887643
No 40
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=67.04 E-value=4 Score=35.07 Aligned_cols=42 Identities=24% Similarity=0.425 Sum_probs=29.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChHH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~ 559 (766)
|..+++....++ .|.|.+..|+|.|....-+.+|++.-+.++
T Consensus 80 l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k 121 (124)
T 1ubd_C 80 LRTHVRIHTGDR---PYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121 (124)
T ss_dssp HHHHHHHHHCCC---CCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred HHHHHHHhCCCC---ceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence 444555544442 699976679999999999999999866654
No 41
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=66.95 E-value=4.7 Score=32.49 Aligned_cols=39 Identities=23% Similarity=0.515 Sum_probs=27.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-+.+
T Consensus 50 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~H~~~ 88 (90)
T 1a1h_A 50 LTTHIRTHTGEK---PFACDI--CGRKFARSDERKRHTKIHLRQ 88 (90)
T ss_dssp HHHHHHHHHCCC---CEECTT--TCCEESSHHHHHHHHGGGGC-
T ss_pred HHHHHHHcCCCC---CccCCC--CCchhCCHHHHHHHHHHhccc
Confidence 444555444442 589985 999999999999999875544
No 42
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.92 E-value=2.5 Score=28.54 Aligned_cols=23 Identities=22% Similarity=0.533 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|.....+..|+..
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHI--CERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 43
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=66.58 E-value=3.3 Score=27.88 Aligned_cols=24 Identities=33% Similarity=0.800 Sum_probs=20.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|....-+..|+..-
T Consensus 2 p~~C~--~C~k~F~~~~~L~~H~~~H 25 (33)
T 1rim_A 2 KFACP--ECPKRFMRSDHLSKHITLH 25 (33)
T ss_dssp CCCCS--SSCCCCSSHHHHHHHHHHH
T ss_pred cccCC--CCCchhCCHHHHHHHHHHh
Confidence 37898 4999999999999998763
No 44
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=66.22 E-value=2.6 Score=28.18 Aligned_cols=25 Identities=24% Similarity=0.547 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 7 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCRI--CLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 588984 9999999999999987643
No 45
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=66.00 E-value=3.5 Score=34.86 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=30.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChHHHH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVI 561 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~Ve 561 (766)
|..+++....+ ..|.|.+ |+|.|.....+.+|++.-|.....
T Consensus 53 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~ 94 (110)
T 2csh_A 53 LVGHMKIHTGI---KPYECNI--CAKRFMWRDSFHRHVTSCTKSYEA 94 (110)
T ss_dssp HHHHHTTTCCC---CCEECSS--SCCEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---CCeeCCC--CcchhcCHHHHHHHHHHccccccc
Confidence 33454443333 2689985 999999999999999987766443
No 46
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=65.65 E-value=3.3 Score=36.91 Aligned_cols=41 Identities=29% Similarity=0.440 Sum_probs=29.7
Q ss_pred hhhhHH-HhhhhcccCcccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 514 ALDPFV-RKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 514 ~ve~fV-kk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|..++ +..+.+ ..|.|.+.+|+|.|....-+.+|+++.|+
T Consensus 114 ~L~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 114 DRAKHQNRTHSNE---KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp TTHHHHHHTTCSC---CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCC---CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 345566 333333 25899866799999999999999988774
No 47
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=69.13 E-value=1.3 Score=28.36 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=20.7
Q ss_pred cccCCCCCcccccchhHHHHHHhhhCh
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
|.|. .|+|.|.....+..|+..-+.
T Consensus 3 ~~C~--~C~k~f~~~~~l~~H~~~H~~ 27 (29)
T 2lvt_A 3 CQCV--MCGKAFTQASSLIAHVRQHTG 27 (29)
Confidence 6787 599999999999999876443
No 48
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.52 E-value=4.6 Score=32.26 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=23.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.. |+|.|....-+.+|++..|.+
T Consensus 47 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 47 AFVCSK--CGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSS--SCCEESCHHHHHHHHHHCCCC
T ss_pred ceECCC--CCChhCCHHHHHHHHHHccCC
Confidence 589984 999999999999999887765
No 49
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.33 E-value=2.4 Score=28.60 Aligned_cols=25 Identities=24% Similarity=0.644 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCEY--CNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHC
T ss_pred CEECCC--CCceeCCHHHHHHHHHHhC
Confidence 689984 9999999999999987643
No 50
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.17 E-value=2.7 Score=26.76 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|. .|+|.|.....+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCP--LCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEET--TTTEEESCHHHHHHHHTT
T ss_pred CcCCC--CCCcccCCHHHHHHHHHh
Confidence 47898 599999999999999864
No 51
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=65.07 E-value=2.2 Score=26.76 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=20.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 2 PLKCRE--CGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp CEECTT--TSCEESCHHHHHHHHHHH
T ss_pred CccCCC--CCCccCChhHHHHHHHHh
Confidence 367984 999999999999998763
No 52
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.67 E-value=3.3 Score=30.40 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
-|.|...+|.|.|....-+.+|++.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4899866799999999999999875
No 53
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=64.63 E-value=3.4 Score=25.98 Aligned_cols=23 Identities=22% Similarity=0.469 Sum_probs=19.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|. .|+|.|....-+.+|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCS--LCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECS--SSSCEESSHHHHHHHHHH
T ss_pred CccCC--CcChhhCCHHHHHHHHHH
Confidence 47898 599999999999999864
No 54
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=64.15 E-value=4.3 Score=33.05 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=23.2
Q ss_pred cccCCCCCcccccchhHHHHHHhhhCh
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
+.|.-..|+|.|..++.+.+||.+.|-
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv 28 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHV 28 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhcc
Confidence 467777899999999999999987774
No 55
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=64.04 E-value=3.5 Score=25.87 Aligned_cols=25 Identities=24% Similarity=0.576 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|....|+|.|....-+.+|+..
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 3678744699999999999999875
No 56
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.98 E-value=3.8 Score=29.21 Aligned_cols=26 Identities=27% Similarity=0.588 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep1_A 12 PYECSD--CGKSFIKKSQLHVHQRIHTG 37 (46)
T ss_dssp SSCCSS--SCCCCSSHHHHHHHHGGGSS
T ss_pred CcCCCC--CCchhCCHHHHHHHHHHhCC
Confidence 589984 99999999999999987443
No 57
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.70 E-value=3.4 Score=29.71 Aligned_cols=25 Identities=24% Similarity=0.490 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|. .|.|.|....-+..|++.-+
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eom_A 12 GHRCS--DCGKFFLQASNFIQHRRIHT 36 (46)
T ss_dssp SCCCS--SSCCCCSSHHHHHHHHHHHS
T ss_pred CcCCC--CCCCeeCChHHHHHHHHHhC
Confidence 58998 49999999999999987643
No 58
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=67.54 E-value=1.5 Score=28.01 Aligned_cols=26 Identities=19% Similarity=0.551 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~h~~ 28 (30)
T 2lvr_A 3 PYVCI--HCQRQFADPGALQRHVRIHTG 28 (30)
Confidence 47897 599999999999999876444
No 59
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=63.51 E-value=2.4 Score=31.12 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=22.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+..|+|.|....-+..|+..-
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~H 43 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQTH 43 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHc
Confidence 58997557999999999999998763
No 60
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.47 E-value=2.8 Score=28.09 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCPQ--CSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHc
Confidence 589984 999999999999998753
No 61
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=63.30 E-value=3.2 Score=27.99 Aligned_cols=25 Identities=12% Similarity=0.377 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSL--CEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSS--SSCEESCHHHHHHHHHHSS
T ss_pred CccCCC--CCchhCCHHHHHHHHHHhc
Confidence 589984 9999999999999987633
No 62
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.23 E-value=3.5 Score=29.02 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2en7_A 12 PYVCNE--CGKAFRSKSYLIIHTRTH 35 (44)
T ss_dssp SSCCTT--TCCCCSSHHHHHHHHTTT
T ss_pred CeECCC--CCCccCCHHHHHHHhhhc
Confidence 589985 999999999999999753
No 63
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=63.10 E-value=7.9 Score=31.52 Aligned_cols=40 Identities=23% Similarity=0.488 Sum_probs=31.0
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++....++ .|.|.. |+|.|....-+..|+...|..
T Consensus 18 ~L~~H~~~H~~~~---~~~C~~--C~k~f~~~~~L~~H~~~h~~~ 57 (88)
T 1llm_C 18 HLTTHIRTHTGEK---PFACDI--CGRKFARSDERKRHRDIQHIL 57 (88)
T ss_dssp HHHHHHHHHHCCC---CEECTT--TCCEESSHHHHHHHHHHHTHH
T ss_pred HHHHHHHHcCCCC---CccCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 3445666554442 699985 999999999999999999964
No 64
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.73 E-value=4.5 Score=34.18 Aligned_cols=36 Identities=17% Similarity=0.328 Sum_probs=27.1
Q ss_pred hHHHhhhhcccCcccccCCCCCccccc-chhHHHHHHhhhCh
Q 004239 517 PFVRKIRDEKYGWKYGCGAKGCTKLFH-AAEFVHKHLKLKHP 557 (766)
Q Consensus 517 ~fVkk~~dEk~g~K~rC~l~gCtKLFK-gpEFVrKHI~nKH~ 557 (766)
.+.+..+.++ .|.|. .|+|.|. ...-+..|++.-|.
T Consensus 14 ~h~~~h~~~~---~~~C~--~C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 14 QWQRAIHERG---EAVCP--TCNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp HHHHTTTTTS---CCCCT--TTCCCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHhccCC---CcCCC--CCCCChhhhHHHHHHHHHHHcC
Confidence 3444444443 79998 4999999 99999999977554
No 65
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=62.62 E-value=3.8 Score=32.38 Aligned_cols=29 Identities=24% Similarity=0.655 Sum_probs=25.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|....|+|.|....-+..|+...|..
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~ 35 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH 35 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC
Confidence 68999888999999999999999877753
No 66
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.34 E-value=3.3 Score=29.64 Aligned_cols=26 Identities=23% Similarity=0.562 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2emi_A 12 HYECSE--CGKAFIQKSTLSMHQRIHRG 37 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGCS
T ss_pred CCCCCC--CCcccCCHHHHHHHHhHhCC
Confidence 589985 99999999999999876443
No 67
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.97 E-value=4.9 Score=28.61 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+..|+...|.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 12 PYECIE--CGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHHTTTTT
T ss_pred CEECCc--cCchhCChHHHHHHhHhhcC
Confidence 589985 99999999999999985554
No 68
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=61.72 E-value=7.7 Score=31.80 Aligned_cols=35 Identities=29% Similarity=0.606 Sum_probs=25.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
|..+++....++ .|.|.+ |+|.|....-+.+|++.
T Consensus 63 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 63 LTRHYRKHTGAK---PFQCGV--CNRSFSRSDHLALHMKR 97 (100)
T ss_dssp HHHHHHHHTSCC---SCBCSS--SCCBCSSHHHHHHHHHH
T ss_pred HHHHHHHhCCCC---CeECCC--CcCccCCHHHHHHHHHH
Confidence 334555444442 589985 99999999999999875
No 69
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=61.57 E-value=3.3 Score=32.42 Aligned_cols=28 Identities=18% Similarity=0.422 Sum_probs=24.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|...+|.|.|+....+..|+..-+.
T Consensus 17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 44 (72)
T 2epa_A 17 SHICSHPGCGKTYFKSSHLKAHTRTHTG 44 (72)
T ss_dssp CEECSSTTTCCEESSHHHHHHHHHHHSS
T ss_pred ceeCCCCCCccccCCHHHHHHHHHhcCC
Confidence 7899877899999999999999976443
No 70
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.52 E-value=4 Score=29.17 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq2_A 12 PYQCNE--CGKAFSQTSKLARHQRVHT 36 (46)
T ss_dssp SSSCCS--SCCCCSSHHHHHHHGGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987633
No 71
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.47 E-value=3.9 Score=29.24 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emg_A 12 PFICSE--CGKVFTHKTNLIIHQKIHT 36 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTTS
T ss_pred CEECCc--cCcccCCHHHHHHHHHHhC
Confidence 589985 9999999999999987633
No 72
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.18 E-value=3.9 Score=29.25 Aligned_cols=25 Identities=28% Similarity=0.589 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq1_A 12 PYKCNE--CGKAFRAHSNLTTHQVIHT 36 (46)
T ss_dssp CCCCTT--TTCCCSSHHHHHHHHTTTC
T ss_pred CeECCc--CChhhCCHHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 73
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=60.87 E-value=6.8 Score=30.58 Aligned_cols=35 Identities=20% Similarity=0.542 Sum_probs=22.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
|..+++....++ .|.|.+ |+|.|....-+..|++.
T Consensus 37 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 37 LTRHIRIHTGQK---PFQCRI--CMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp HHHHHHHHHCCC---CEECTT--TCCEESCHHHHHHHHTT
T ss_pred HHHHHHhhCCCC---CeECCC--CCchhCCHHHHHHHHHh
Confidence 344554444342 578874 88888888888888754
No 74
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.71 E-value=3.2 Score=28.97 Aligned_cols=25 Identities=24% Similarity=0.522 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|.....+..|+..-+
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 10 VYECQE--CGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CEECSS--SCCEESSHHHHHHHGGGCC
T ss_pred CeECCC--CCCCcCCHHHHHHHHHHhC
Confidence 589984 9999999999999987633
No 75
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.61 E-value=4.9 Score=28.51 Aligned_cols=26 Identities=19% Similarity=0.443 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|.....+..|+..-+.
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 35 (43)
T 2yrm_A 10 AFFCNE--CDCRFSEEASLKRHTLQTHS 35 (43)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHHHHHTC
T ss_pred CEECCC--CCCeeCChHHHHHHHHhhCC
Confidence 589984 99999999999999876443
No 76
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.37 E-value=4.3 Score=29.09 Aligned_cols=24 Identities=21% Similarity=0.592 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2en9_A 12 LFKCNE--CKKTFTQSSSLTVHQRIH 35 (46)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHH
T ss_pred CEECCc--cCcccCCHHHHHHHHHHc
Confidence 589985 999999999999998763
No 77
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.17 E-value=2.9 Score=29.86 Aligned_cols=25 Identities=24% Similarity=0.542 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+.+|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (45)
T 2epu_A 12 PFECTH--CGKSFRAKGNLVTHQRIHT 36 (45)
T ss_dssp SEEETT--TTEEESSHHHHHHHHTTTS
T ss_pred CccCCC--CCCccCChHHHHHHHHHhC
Confidence 589985 9999999999999987633
No 78
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=60.14 E-value=8 Score=30.41 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=23.2
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhh
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
|..+++....++ .|.|.+ |+|.|....-+.+|++.-
T Consensus 45 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 45 MKKHTFIHTGEK---PHKCQV--CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp HHHHHHHHHTCC---CEECTT--TSCEESSHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC---CCcCCC--cchhhCChHHHHHHHHhh
Confidence 344554444342 578874 888888888888887653
No 79
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=59.99 E-value=4.4 Score=25.49 Aligned_cols=23 Identities=26% Similarity=0.626 Sum_probs=20.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|. .|+|.|....-+..|+..
T Consensus 3 ~~~C~--~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCS--VCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECS--SSCCEESCHHHHHHHHTT
T ss_pred CccCC--CCCcccCCHHHHHHHHHh
Confidence 47898 599999999999999875
No 80
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.94 E-value=4.2 Score=29.15 Aligned_cols=24 Identities=25% Similarity=0.645 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|.....+.+|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoh_A 12 PYECKE--CRKTFIQIGHLNQHKRVH 35 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHC
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHh
Confidence 589984 999999999999998763
No 81
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=59.92 E-value=3.6 Score=30.85 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=26.2
Q ss_pred HHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 518 FVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 518 fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
+++..+.|+ .|.|.+ |+|.|....-+..|+..-+.|
T Consensus 15 h~~~H~~~k---~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 50 (54)
T 1yui_A 15 PRSRSQSEQ---PATCPI--CYAVIRQSRNLRRHLELRHFA 50 (54)
T ss_dssp CHHHHTSSC---CEECTT--TCCEESSHHHHHHHHHHHTTT
T ss_pred HHHhcCCCC---CccCCC--CCcccCCHHHHHHHHHHhccC
Confidence 444444442 589985 999999999999999764433
No 82
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.86 E-value=3 Score=29.91 Aligned_cols=26 Identities=27% Similarity=0.717 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+.+|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eoz_A 12 PYSCNV--CGKAFVLSAHLNQHLRVHTQ 37 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHHHHHSS
T ss_pred CeECcc--cChhhCCHHHHHHHHHHhCC
Confidence 689985 99999999999999876443
No 83
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=59.77 E-value=6 Score=32.48 Aligned_cols=41 Identities=24% Similarity=0.460 Sum_probs=28.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|..+++....++ .|.|....|+|.|....-+..|+..-+.
T Consensus 32 ~l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 32 HLKAHLRTHTGEK---PYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp HHHHHHHHHSCCC---CEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred HHHHHHHHhCCCC---CeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 3444555544442 6899755699999999999999876544
No 84
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.66 E-value=4.7 Score=28.77 Aligned_cols=24 Identities=25% Similarity=0.671 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2enf_A 12 PYKCNE--CGKVFTQNSHLVRHRGIH 35 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHTTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHhh
Confidence 589985 999999999999998753
No 85
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=59.65 E-value=7.2 Score=30.79 Aligned_cols=25 Identities=32% Similarity=0.693 Sum_probs=16.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|...+|+|.|....-+..|+..
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHH
Confidence 4667644577777777777777654
No 86
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.45 E-value=4.1 Score=29.20 Aligned_cols=24 Identities=25% Similarity=0.643 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |.|.|....-+..|++.-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2enh_A 12 PYECDV--CRKAFSHHASLTQHQRVH 35 (46)
T ss_dssp SCBCTT--TCCBCSSSHHHHHHGGGS
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 87
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.45 E-value=5 Score=28.74 Aligned_cols=24 Identities=25% Similarity=0.685 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yth_A 12 PFQCEE--CGKRFTQNSHLHSHQRVH 35 (46)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHGGGG
T ss_pred CCCCCC--CCcccCCHHHHHHHHHhc
Confidence 589985 999999999999998763
No 88
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.10 E-value=4.7 Score=28.69 Aligned_cols=24 Identities=25% Similarity=0.677 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCNE--CGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCTT--TCCCCSSHHHHHHHHTTT
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhc
Confidence 589985 999999999999998763
No 89
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.09 E-value=3.9 Score=32.56 Aligned_cols=27 Identities=30% Similarity=0.557 Sum_probs=24.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 15 PYECYI--CHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred CeECCC--cCchhCCHHHHHHHHHHhcCC
Confidence 589985 999999999999999988864
No 90
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.08 E-value=4.8 Score=28.64 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 12 PHECRE--CGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTT
T ss_pred CeeCCC--CCchhCCHHHHHHHHHHc
Confidence 689985 999999999999998763
No 91
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.92 E-value=3.6 Score=29.50 Aligned_cols=25 Identities=24% Similarity=0.580 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytp_A 12 HYECSE--CGKAFARKSTLIMHQRIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeECCc--CCcccCCHHHHHHHHHHhC
Confidence 589984 9999999999999987633
No 92
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=58.84 E-value=5.2 Score=33.45 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|....-+.+|+..-+.+
T Consensus 73 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 99 (106)
T 2ee8_A 73 PFKCQE--CGKGFCQSRTLAVHKTLHMQT 99 (106)
T ss_dssp TTSCSS--SCCCCSSHHHHHHHHHHTTSC
T ss_pred CeECCC--cCCcccCHHHHHHHHHHhCCC
Confidence 588984 999999999999998765544
No 93
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.75 E-value=4.1 Score=29.22 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|++.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 12 PYQCSE--CGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTH
T ss_pred CeeCCC--CCcccCCHHHHHHHHHH
Confidence 689984 99999999999999876
No 94
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=58.72 E-value=4.8 Score=28.80 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2emk_A 12 PYECKE--CGKAFSQTTHLIQHQRVH 35 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHHHH
T ss_pred ceECCC--CCchhCCHHHHHHHHHHc
Confidence 589985 999999999999999763
No 95
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=58.70 E-value=4.1 Score=28.40 Aligned_cols=26 Identities=23% Similarity=0.525 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|. .|+|.|....-+..|+..-+.
T Consensus 10 ~~~C~--~C~k~f~~~~~L~~H~~~H~~ 35 (42)
T 2el5_A 10 PYECS--ECGKAFNRKDQLISHQRTHAG 35 (42)
T ss_dssp SEECS--SSCCEESSHHHHHHHHGGGCC
T ss_pred CccCC--CcChhhCCHHHHHHHHHhcCC
Confidence 58998 499999999999999976443
No 96
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.69 E-value=4.9 Score=28.69 Aligned_cols=25 Identities=20% Similarity=0.475 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2epz_A 12 PFDCID--CGKAFSDHIGLNQHRRIHT 36 (46)
T ss_dssp SBCCTT--TCCCBSSHHHHHHHHTTTT
T ss_pred CeECCC--CCceeCCHHHHHHHHHHhC
Confidence 689985 9999999999999997633
No 97
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=58.65 E-value=6 Score=33.40 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=23.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |.|.|....-+.+|++..|..
T Consensus 69 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 69 KLTCLE--CMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp GGEEGG--GTEECSSHHHHHHHHHHTSCC
T ss_pred CccCcc--ccchhCCHHHHHHHHHHHcCC
Confidence 689985 999999999999999877753
No 98
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.48 E-value=4.3 Score=28.89 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 12 PYECNE--CGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGS
T ss_pred CeECCC--CCcccCchHHHHHHHhHhc
Confidence 589984 9999999999999987643
No 99
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.19 E-value=5 Score=27.86 Aligned_cols=23 Identities=26% Similarity=0.677 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 10 PYSCAE--CKETFSDNNRLVQHQKM 32 (42)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589984 99999999999999876
No 100
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.18 E-value=4.9 Score=28.76 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em6_A 12 CYKCDV--CGKEFSQSSHLQTHQRVH 35 (46)
T ss_dssp CCBCSS--SCCBCSSHHHHHHHHTTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHHc
Confidence 589985 999999999999998753
No 101
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.13 E-value=4 Score=29.15 Aligned_cols=24 Identities=29% Similarity=0.643 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep3_A 12 PYRCAE--CGKAFTDRSNLFTHQKIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHHc
Confidence 589985 999999999999999763
No 102
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.08 E-value=4.8 Score=28.66 Aligned_cols=25 Identities=36% Similarity=0.650 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq4_A 12 LYNCKE--CGKSFSRAPCLLKHERLHS 36 (46)
T ss_dssp CCCBTT--TTBCCSCHHHHHHHHHHCC
T ss_pred CeECCC--CCCccCchHHHHHHHHhcC
Confidence 589985 9999999999999987633
No 103
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.03 E-value=3.9 Score=29.14 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytf_A 12 PFECSE--CQKAFNTKSNLIVHQRTHTG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTSCS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhCC
Confidence 689985 99999999999999876433
No 104
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.92 E-value=4.4 Score=28.35 Aligned_cols=26 Identities=23% Similarity=0.585 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 36 (42)
T 2eos_A 11 PYPCEI--CGTRFRHLQTLKSHLRIHTG 36 (42)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHTTTTSC
T ss_pred CEECCC--CCCccCCHHHHHHHHHhcCC
Confidence 589984 99999999999999876443
No 105
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=57.88 E-value=6.4 Score=30.99 Aligned_cols=39 Identities=28% Similarity=0.447 Sum_probs=28.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....++ .|.|.. |+|.|....-+..|+...+.+
T Consensus 17 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (82)
T 2kmk_A 17 LSTHLLIHSDTR---PYPCQY--CGKRFHQKSDMKKHTFIHTGE 55 (82)
T ss_dssp HHHHHHHHHTCC---CEECSS--SCCEESSHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCC---CeeCCc--CChhhCCHHHHHHHHHHhcCC
Confidence 444555544442 689985 999999999999999865543
No 106
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.79 E-value=3.9 Score=29.11 Aligned_cols=25 Identities=28% Similarity=0.699 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yrj_A 12 PYRCGE--CGKAFAQKANLTQHQRIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeECCC--CCCccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987633
No 107
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.79 E-value=5.1 Score=28.48 Aligned_cols=25 Identities=28% Similarity=0.475 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eov_A 12 PYKCSD--CGKSFTWKSRLRIHQKCHT 36 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHHS
T ss_pred CccCCc--cChhhCCHHHHHHHHHhcC
Confidence 589985 9999999999999987543
No 108
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=57.34 E-value=4.1 Score=28.11 Aligned_cols=26 Identities=23% Similarity=0.634 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 6 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 31 (39)
T 1njq_A 6 SYTCSF--CKREFRSAQALGGHMNVHRR 31 (39)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHTTCC
T ss_pred ceECCC--CCcccCCHHHHHHHHHHcCC
Confidence 589985 99999999999999876433
No 109
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.33 E-value=5.4 Score=28.26 Aligned_cols=24 Identities=25% Similarity=0.598 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|.....+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (44)
T 2eou_A 12 TSECQ--ECGKIFRHSSLLIEHQALH 35 (44)
T ss_dssp CCCCT--TTCCCCSSHHHHHHHHHHH
T ss_pred CeECC--CCCcccCCHHHHHHHHHHH
Confidence 58998 4999999999999998763
No 110
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=57.30 E-value=7.6 Score=32.39 Aligned_cols=39 Identities=28% Similarity=0.506 Sum_probs=28.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....++ .|.|.+ |.|.|....-+..|+...+.+
T Consensus 33 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 71 (106)
T 2ee8_A 33 LLIHERTHTDER---PYTCDI--CHKAFRRQDHLRDHRYIHSKE 71 (106)
T ss_dssp HHHHHHHHCCSC---CCBCSS--SCCBCSCHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCCC---CcCCCC--ccchhCCHHHHHHHHHHhCCC
Confidence 344555544442 689985 999999999999998775543
No 111
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.19 E-value=4.3 Score=29.11 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em4_A 12 PYECIE--CGKAFKTKSSLICHRRSHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhcC
Confidence 589985 9999999999999987643
No 112
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.99 E-value=5.1 Score=28.57 Aligned_cols=24 Identities=25% Similarity=0.688 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2yti_A 12 PYKCNE--CGKVFTQNSHLARHRGIH 35 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTTT
T ss_pred CeECCC--CCcccCChhHHHHHhHhc
Confidence 589985 999999999999998753
No 113
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.97 E-value=5.2 Score=28.63 Aligned_cols=24 Identities=29% Similarity=0.822 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytq_A 12 PYGCSE--CGKAFSSKSYLIIHMRTH 35 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHTTT
T ss_pred CcCCCc--cChhhCChHHHHHHHHHh
Confidence 589985 999999999999998763
No 114
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.96 E-value=4.5 Score=29.05 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 12 PYKCQV--CGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHTTT
T ss_pred ccCCCC--CCcccCcHHHHHHHHHh
Confidence 589985 99999999999999876
No 115
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.95 E-value=4.1 Score=29.08 Aligned_cols=25 Identities=28% Similarity=0.627 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em3_A 12 PYECKV--CSKAFTQKAHLAQHQKTHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhC
Confidence 689985 9999999999999997633
No 116
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.86 E-value=3.8 Score=29.19 Aligned_cols=24 Identities=25% Similarity=0.600 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq3_A 12 PYECNQ--CGKAFSVRSSLTTHQAIH 35 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHTTS
T ss_pred CeECCC--CChhhCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 117
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=56.48 E-value=4.3 Score=28.22 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 11 ~~~C~~--C~k~f~~~~~l~~H~~~H 34 (42)
T 2epc_A 11 PYLCGQ--CGKSFTQRGSLAVHQRSC 34 (42)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHT
T ss_pred CeECCC--CCcccCCHHHHHHHhhhc
Confidence 589985 999999999999998763
No 118
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=56.39 E-value=4.2 Score=36.42 Aligned_cols=41 Identities=24% Similarity=0.489 Sum_probs=29.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++..+.++ .|.|.+.+|+|.|....-+.+|++.-|.|
T Consensus 108 L~~H~~~h~~~~---~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 108 LKIHKRTHTGEK---PFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp HHHHHTTTCSSC---SBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred HHHHHHhhCCCC---CccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 444555544342 58998667999999999999999875554
No 119
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=56.36 E-value=6.3 Score=33.23 Aligned_cols=40 Identities=25% Similarity=0.473 Sum_probs=29.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++....++ .|.|.+ |.|.|....-+..|++..|.+
T Consensus 24 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 24 QRDRHMSMHLGLR---PYGCGV--CGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp HHHHHHHHHSCCC---SEECTT--TSCEESSSHHHHHHHTTTCCC
T ss_pred HHHHHHHHcCCCc---CccCCC--CCcccCCHHHHHHHHHHcCCC
Confidence 3455666544442 699985 999999999999999876554
No 120
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=56.32 E-value=6.4 Score=32.07 Aligned_cols=39 Identities=21% Similarity=0.369 Sum_probs=28.8
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....++ .|.|.+ |.|.|....-+.+|+...|.+
T Consensus 23 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 23 LNRHKLSHSGEK---PYSCPV--CGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp HHHHHHHSCSSC---SEECSS--SCCEESCHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCCC---CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 444555544342 689985 999999999999999876654
No 121
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.13 E-value=4.9 Score=28.68 Aligned_cols=26 Identities=23% Similarity=0.561 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+.+|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eml_A 12 PYECSV--CGKAFSHRQSLSVHQRIHSG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGSS
T ss_pred CeeCCC--cCCccCCHHHHHHHHHHhcC
Confidence 689985 99999999999999976433
No 122
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.92 E-value=5.6 Score=28.37 Aligned_cols=25 Identities=24% Similarity=0.656 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 12 PYKCNE--CGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHGGGTS
T ss_pred CeECCC--CCCeeCCHHHHHHHhhhcC
Confidence 589985 9999999999999987633
No 123
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=55.86 E-value=6 Score=28.20 Aligned_cols=24 Identities=21% Similarity=0.508 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2em0_A 12 TWKCRE--CDMCFSQASSLRLHQNVH 35 (46)
T ss_dssp CCCCSS--SCCCCSSHHHHHHHGGGG
T ss_pred CeECCC--CCcccCCHHHHHHHHHHc
Confidence 589984 999999999999998763
No 124
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=55.75 E-value=4.8 Score=28.83 Aligned_cols=24 Identities=21% Similarity=0.605 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2emj_A 12 PFECAE--CGKSFSISSQLATHQRIH 35 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CEECCC--CCcccCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 125
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.67 E-value=4.8 Score=28.25 Aligned_cols=24 Identities=25% Similarity=0.591 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2eof_A 12 PYECNE--CQKAFNTKSNLMVHQRTH 35 (44)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHT
T ss_pred CeECCC--CCcccCCHhHHHHHHHHh
Confidence 589985 999999999999999763
No 126
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.58 E-value=4.6 Score=28.92 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emf_A 12 HFECTE--CGKAFTRKSTLSMHQKIHT 36 (46)
T ss_dssp CEECSS--SCCEESCHHHHHHHGGGTS
T ss_pred CeECCC--CCchhCCHHHHHHHHHHhC
Confidence 589985 9999999999999997643
No 127
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.57 E-value=4.6 Score=28.75 Aligned_cols=25 Identities=28% Similarity=0.523 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eow_A 12 PYKCNE--CGKAFRARSSLAIHQATHS 36 (46)
T ss_dssp CEECTT--SCCEESSHHHHHHHHHHHC
T ss_pred Ceeccc--cCChhcCHHHHHHHHHHcC
Confidence 589985 9999999999999997633
No 128
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.36 E-value=4.6 Score=28.73 Aligned_cols=25 Identities=20% Similarity=0.486 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emm_A 12 PHKCNE--CGKSFIQSAHLIQHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CeeCCC--CChhhCCHHHHHHHHHHhC
Confidence 589985 9999999999999987633
No 129
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=55.25 E-value=5.9 Score=29.70 Aligned_cols=26 Identities=31% Similarity=0.632 Sum_probs=22.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |.|.|....-+..|++..|.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 12 PYICQS--CGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHTSC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhcC
Confidence 589985 99999999999999986664
No 130
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.25 E-value=5.8 Score=28.36 Aligned_cols=24 Identities=21% Similarity=0.495 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|....-+..|++.-
T Consensus 12 ~~~C~--~C~k~F~~~~~L~~H~~~H 35 (46)
T 2elz_A 12 PYKCE--DCGKGYNRRLNLDMHQRVH 35 (46)
T ss_dssp SCBCS--SSCCBCSSHHHHHHHGGGG
T ss_pred CeeCc--ccCchhCCHHHHHHHHHhc
Confidence 58998 4999999999999998753
No 131
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.21 E-value=3.9 Score=27.73 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=20.1
Q ss_pred ccccCCCCCcccccch-hHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAA-EFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgp-EFVrKHI~n 554 (766)
-|.|. .|+|.|... .-+..|+..
T Consensus 9 ~~~C~--~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCP--YCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECS--SSSCEECSSCHHHHHHHHH
T ss_pred CeECC--CCChhhccCHHHHHHHHHh
Confidence 58998 499999998 999999875
No 132
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.05 E-value=4.6 Score=28.91 Aligned_cols=24 Identities=29% Similarity=0.569 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yto_A 12 PYKCSD--CGKAFTRKSGLHIHQQSH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CEECcc--cCCccCCHhHHHHHHHHc
Confidence 589984 999999999999998763
No 133
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.86 E-value=5 Score=28.62 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emy_A 12 PYECHE--CGKAFSRKYQLISHQRTHA 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHT
T ss_pred CcCCCC--CCcccCcHHHHHHHHHHcC
Confidence 589985 9999999999999987633
No 134
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.73 E-value=4.7 Score=28.87 Aligned_cols=23 Identities=17% Similarity=0.512 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 12 SHQCHE--CGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCc--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 135
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=54.56 E-value=7.7 Score=33.51 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=24.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
-|.|...+|+|-|.-..-+..|++..|.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHT 54 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHK 54 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence 5899877899999999999999976675
No 136
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.41 E-value=4.9 Score=28.58 Aligned_cols=23 Identities=26% Similarity=0.658 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 12 PYICNE--CGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGG
T ss_pred CEECCC--CChhhCChHHHHHHHHh
Confidence 689984 99999999999999875
No 137
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.38 E-value=5.3 Score=28.49 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em7_A 12 PYKCEE--CGKGFICRRDLYTHHMVHT 36 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHGGGGT
T ss_pred CccCCC--ccchhCCHHHHHHHHHHhC
Confidence 689985 9999999999999987633
No 138
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.29 E-value=4 Score=29.06 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 12 PYNCEE--CGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCCcCCHHHHHHHHHh
Confidence 589985 99999999999999875
No 139
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.16 E-value=4.9 Score=28.66 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |.|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep0_A 12 PYKCDV--CHKSFRYGSSLTVHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeeCcc--cCcccCChHHHHHHHHHh
Confidence 689985 999999999999998763
No 140
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.16 E-value=4.1 Score=28.34 Aligned_cols=24 Identities=25% Similarity=0.617 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H 34 (42)
T 2ytb_A 11 PYRCDQ--CGKAFSQKGSLIVHIRVH 34 (42)
T ss_dssp SBCCTT--TTCCBSSHHHHHTTGGGT
T ss_pred CeeCCC--ccchhCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 141
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=54.02 E-value=5.4 Score=32.59 Aligned_cols=39 Identities=23% Similarity=0.392 Sum_probs=27.5
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++....+ ..|.|.+ |+|.|....-+.+|+...+.+
T Consensus 24 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 62 (96)
T 2dmd_A 24 LKTHMRCHTGV---KPYKCKT--CDYAAADSSSLNKHLRIHSDE 62 (96)
T ss_dssp HHHHGGGCCCC---CSEECSS--SCCEESSHHHHHHHHHHSCCC
T ss_pred HHHHHHhcCCC---CCEeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 44455544333 2689984 999999999999999875543
No 142
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.99 E-value=4.8 Score=28.71 Aligned_cols=24 Identities=25% Similarity=0.833 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ene_A 12 PYKCNE--CGKVFRHNSYLSRHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCC--CCchhCChHHHHHHHhhc
Confidence 689985 999999999999999863
No 143
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.93 E-value=5.1 Score=28.30 Aligned_cols=24 Identities=25% Similarity=0.737 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|.....+..|+..-
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCSC--CEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CccCCC--CCcccCCHHHHHHHHHHh
Confidence 689985 999999999999998763
No 144
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=53.86 E-value=4.9 Score=28.58 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2el4_A 12 PYGCSQ--CAKTFSLKSQLIVHQRSH 35 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHGGGS
T ss_pred ceECCC--CCchhCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 145
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=53.74 E-value=5.7 Score=28.43 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el6_A 12 PYKCSQ--CEKSFSGKLRLLVHQRMHT 36 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589985 9999999999999987643
No 146
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.62 E-value=5.1 Score=28.59 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 12 PYICAE--CGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHT
T ss_pred CeECCC--CChhhCCHHHHHHHHHHc
Confidence 589985 999999999999998763
No 147
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=53.59 E-value=5.1 Score=28.60 Aligned_cols=24 Identities=29% Similarity=0.754 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ema_A 12 RYKCNE--CGKVFSRNSQLSQHQKIH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTGG
T ss_pred CcCCCC--CcchhCCHHHHHHHHHhc
Confidence 689985 999999999999998763
No 148
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.47 E-value=4.8 Score=28.34 Aligned_cols=24 Identities=29% Similarity=0.612 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2eoj_A 12 PYECCE--CGKVFSRKDQLVSHQKTH 35 (44)
T ss_dssp SCEETT--TTEECSSHHHHHHHHTTS
T ss_pred CeeCCC--CCCccCCHHHHHHHHHHc
Confidence 589985 999999999999998763
No 149
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=53.45 E-value=8.4 Score=35.05 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=30.4
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
|..+++..+.|+ .|.|.+ |+|.|.....+.+|++.-|.+
T Consensus 66 L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 66 RTKHEIHHTGER---RYQCLA--CGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp HHHHHHHHHTCC---CEEESS--SCCEESSHHHHHHHHHHHTCC
T ss_pred hhhhccccCCCc---cccCCC--CCCCcCCHHHHHHHhHHhcCC
Confidence 344555555553 589985 999999999999999998876
No 150
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.29 E-value=6.4 Score=28.03 Aligned_cols=24 Identities=21% Similarity=0.541 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoq_A 12 PFKCDI--CGKSFCGRSRLNRHSMVH 35 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHT
T ss_pred CcCCCc--CCchhCCHHHHHHHHHHc
Confidence 589985 999999999999998763
No 151
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.24 E-value=5 Score=28.64 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eq0_A 12 PYKCHE--CGKVFRRNSHLARHQLIHT 36 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHTTTC
T ss_pred CeECCC--CCchhCCHHHHHHHHHHcC
Confidence 689985 9999999999999987633
No 152
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=53.09 E-value=12 Score=29.49 Aligned_cols=26 Identities=23% Similarity=0.393 Sum_probs=22.5
Q ss_pred cccCCCC-CcccccchhHHHHHHhhhC
Q 004239 531 YGCGAKG-CTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 531 ~rC~l~g-CtKLFKgpEFVrKHI~nKH 556 (766)
|.|...+ |+|.|+...-+.+|++..|
T Consensus 59 ~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 59 YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 8898544 9999999999999998765
No 153
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=53.04 E-value=8.2 Score=32.59 Aligned_cols=36 Identities=19% Similarity=0.494 Sum_probs=21.2
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|..+++....++ .|.|.+ |+|.|....-+..|+..
T Consensus 53 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 53 QLKRHQRRHTGVK---PFQCKT--CQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp HHHHHHHHHHCCC---CEECTT--TCCEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC---CccCCc--cCchhCCHHHHHHHHHH
Confidence 3444555443332 467763 77777777777777654
No 154
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.03 E-value=5.5 Score=28.42 Aligned_cols=25 Identities=24% Similarity=0.708 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytk_A 12 PYKCNE--CGKVFTQNSHLTNHWRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CEeCCc--CCCccCCHHHHHHHHHHHC
Confidence 689985 9999999999999987533
No 155
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.80 E-value=4.4 Score=28.93 Aligned_cols=23 Identities=35% Similarity=0.605 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICTV--CGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHh
Confidence 589985 99999999999999875
No 156
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.79 E-value=5.5 Score=28.58 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCME--CGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTT--TTBCCSSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHH
Confidence 689985 99999999999999876
No 157
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=52.76 E-value=5.2 Score=28.48 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |.|.|....-+..|++.-+.
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 35 (45)
T 2epq_A 10 PYSCPV--CGLRFKRKDRMSYHVRSHDG 35 (45)
T ss_dssp SSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHccC
Confidence 689985 99999999999999976443
No 158
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=52.75 E-value=7.7 Score=31.17 Aligned_cols=39 Identities=18% Similarity=0.485 Sum_probs=28.4
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|..+++....++ .|.|.. |+|.|....-+..|+...+.
T Consensus 21 ~l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 21 SLTRHIRIHTGQK---PFQCRI--CMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp HHHHHHHHHHCCC---CEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCCC---CccCCC--CCcccCCHHHHHHHHHHcCC
Confidence 3445665544442 689985 99999999999999986443
No 159
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=52.62 E-value=5.5 Score=29.49 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|.....+..|+..-
T Consensus 4 ~~~C~~--C~~~f~~~~~l~~H~~~h 27 (57)
T 3uk3_C 4 SRECSY--CGKFFRSNYYLNIHLRTH 27 (57)
T ss_dssp -CBCTT--TCCBCSCHHHHHHHHHHH
T ss_pred CccCCC--CcchhCChHHHHHHHHHc
Confidence 689985 999999999999999863
No 160
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=52.48 E-value=4.6 Score=31.57 Aligned_cols=26 Identities=19% Similarity=0.724 Sum_probs=22.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+..|+|.|....-+..|+..-
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h 44 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIH 44 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhh
Confidence 69998667999999999999998753
No 161
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.45 E-value=4.5 Score=28.88 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNE--CGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHHHH
T ss_pred CeECCC--CCchhCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 162
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.40 E-value=7.2 Score=27.87 Aligned_cols=23 Identities=30% Similarity=0.661 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |.|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 12 PFKCNE--CGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 163
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=52.36 E-value=6.9 Score=28.93 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.4
Q ss_pred cccCCCCCcccccchhHHHHHHhhhCh
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
|.|. .|+|.|....-+..|+..-+.
T Consensus 2 ~~C~--~C~~~f~~~~~l~~H~~~h~~ 26 (57)
T 1bbo_A 2 YICE--ECGIRXKKPSMLKKHIRTHTD 26 (57)
T ss_dssp CBCT--TTCCBCSSHHHHHHHHHHTSS
T ss_pred CcCC--CCcCcCCCHHHHHHHHHhcCC
Confidence 7898 499999999999999987443
No 164
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.35 E-value=4.8 Score=28.73 Aligned_cols=25 Identities=28% Similarity=0.703 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en6_A 12 PYGCNE--CGKTFSQKSILSAHQRTHT 36 (46)
T ss_dssp CEEETT--TTEEESSHHHHHHHHHHHS
T ss_pred CeECCC--CCcccCchHHHHHHHHHcC
Confidence 589985 9999999999999998643
No 165
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.31 E-value=6.1 Score=28.07 Aligned_cols=24 Identities=25% Similarity=0.560 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eme_A 12 PYVCDY--CGKAFGLSAELVRHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGG
T ss_pred CeECCC--CChhhCCHHHHHHHHHhc
Confidence 689985 999999999999999753
No 166
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.24 E-value=4.7 Score=28.76 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKE--CGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCcc--cChhhCCHHHHHHHHHH
Confidence 589985 99999999999999865
No 167
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=52.23 E-value=4.9 Score=35.02 Aligned_cols=28 Identities=25% Similarity=0.367 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChHH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 559 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~ 559 (766)
.|.|.. |+|.|....-+.+|+.+.|++.
T Consensus 100 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~ 127 (129)
T 2wbt_A 100 TKVCPV--CKKEFTSTDSALDHVCKKHNIC 127 (129)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHTTCCC
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHHCCcc
Confidence 578874 8888888888888888877654
No 168
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=52.11 E-value=5.8 Score=28.20 Aligned_cols=24 Identities=33% Similarity=0.665 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em9_A 12 PYNCKE--CGKSFRWASCLLKHQRVH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGGG
T ss_pred CeECCc--cccccCChHHHHHHHHHh
Confidence 689985 999999999999998763
No 169
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=51.87 E-value=12 Score=29.99 Aligned_cols=35 Identities=23% Similarity=0.532 Sum_probs=24.3
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
|..+++....++ .|.|.. |+|.|....-+.+|++.
T Consensus 53 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 53 LTRHYRKHTGHR---PFQCQK--CDRAFSRSDHLALHMKR 87 (89)
T ss_dssp HHHHHHHHHCCC---CEECSS--SSCEESSHHHHHHHGGG
T ss_pred HHHHHHHcCCCC---CccCCC--CCcccCCHHHHHHHHHh
Confidence 344554444442 588974 99999999888888864
No 170
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=51.75 E-value=6.8 Score=27.99 Aligned_cols=24 Identities=29% Similarity=0.522 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ely_A 12 PFKCVE--CGKGFSRRSALNVHHKLH 35 (46)
T ss_dssp SBCCSS--SCCCBSSTTHHHHHHHHH
T ss_pred CcccCc--cCcccCCHHHHHHHHHHc
Confidence 689985 999999999999998763
No 171
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.73 E-value=6.1 Score=28.07 Aligned_cols=25 Identities=24% Similarity=0.689 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eoe_A 12 PYKCNE--CGKVFTQNSHLANHQRIHT 36 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHGGGS
T ss_pred CeECCC--cChhhCCHHHHHHHHHHcC
Confidence 689985 9999999999999997533
No 172
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.53 E-value=8 Score=32.84 Aligned_cols=27 Identities=15% Similarity=0.221 Sum_probs=24.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 80 ~~~C~~--C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 80 VLKCMY--CGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHTTTT
T ss_pred ceECCC--CCCccCCHHHHHHHHHHhCCc
Confidence 689985 999999999999999988765
No 173
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.26 E-value=5.3 Score=28.23 Aligned_cols=25 Identities=16% Similarity=0.647 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCSK--CDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECSS--SSCEESSSHHHHHHHHHCC
T ss_pred CeECCC--CCchhCCHHHHHHHhHhcC
Confidence 589985 9999999999999987643
No 174
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.93 E-value=6.1 Score=27.88 Aligned_cols=24 Identities=25% Similarity=0.636 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|.....+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (44)
T 2emb_A 12 RYECS--KCQATFNLRKHLIQHQKTH 35 (44)
T ss_dssp SEECT--TTCCEESCHHHHHHHGGGG
T ss_pred CeECC--CCCCccCCHHHHHHHHHHc
Confidence 58998 5999999999999999763
No 175
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.90 E-value=5.9 Score=28.32 Aligned_cols=25 Identities=24% Similarity=0.632 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em2_A 12 PFKCKE--CGKAFRQNIHLASHLRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CEECCc--CCchhCCHHHHHHHHHHhC
Confidence 589984 9999999999999987633
No 176
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.82 E-value=6.1 Score=28.15 Aligned_cols=25 Identities=28% Similarity=0.635 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep2_A 12 PYECSI--CGKSFTKKSQLHVHQQIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTTS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhC
Confidence 589985 9999999999999997533
No 177
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=50.73 E-value=7.5 Score=29.72 Aligned_cols=25 Identities=20% Similarity=0.611 Sum_probs=22.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+...|
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~~H 34 (66)
T 2drp_A 10 TYRCKV--CSRVYTHISNFCRHYVTSH 34 (66)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred ceECCC--CcchhCCHHHHHHHHHHHc
Confidence 689984 9999999999999999877
No 178
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=56.16 E-value=3.3 Score=25.82 Aligned_cols=23 Identities=26% Similarity=0.579 Sum_probs=19.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|. .|+|.|....-+..|+..
T Consensus 2 p~~C~--~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 2 PYVCE--RCGKRFVQSSQLANHIRH 24 (26)
Confidence 36797 499999999999999864
No 179
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=49.85 E-value=11 Score=30.05 Aligned_cols=38 Identities=29% Similarity=0.463 Sum_probs=29.8
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|..+++..+.|+ .|.|. .|+|.|....-+.+|++. |.
T Consensus 19 ~L~~H~~~Ht~ek---p~~C~--~C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 19 GLSRHRRAHLGYR---PRSCP--ECGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp HHHHHHHHHHTCC---CEECT--TTCCEESSHHHHHHHGGG-GS
T ss_pred HHHHHHHHhCCCc---CeECC--CCCCCcCCHHHHHHHhCc-cC
Confidence 3455677666664 69998 499999999999999875 54
No 180
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.84 E-value=6.1 Score=28.24 Aligned_cols=23 Identities=39% Similarity=0.759 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNE--CGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CEEccc--cCcccCCHHHHHHHHHH
Confidence 589985 99999999999999876
No 181
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=49.80 E-value=7.9 Score=28.99 Aligned_cols=25 Identities=24% Similarity=0.610 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|. .|+|.|....-+..|+..-+
T Consensus 2 ~~~C~--~C~~~f~~~~~l~~H~~~h~ 26 (60)
T 2adr_A 2 SFVCE--VCTRAFARQEHLKRHYRSHT 26 (60)
T ss_dssp CBCCT--TTCCCBSCHHHHHHHHHTTT
T ss_pred cCcCC--CCccccCCHHHHHHHHHHhC
Confidence 47898 49999999999999998744
No 182
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.75 E-value=6.3 Score=28.15 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|....|+|.|....-+..|+..
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 5899744699999999999999876
No 183
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=49.23 E-value=7.1 Score=31.30 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=13.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+.+|+|.|....-+..|+..
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRT 29 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTT
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHh
Confidence 3455544455555555555555543
No 184
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.03 E-value=6.4 Score=28.16 Aligned_cols=23 Identities=22% Similarity=0.759 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|.....+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 12 CFKCNK--CEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CEECSS--SCCEESSSHHHHHHHTT
T ss_pred CEECcC--CCCcCCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 185
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=48.93 E-value=15 Score=30.98 Aligned_cols=38 Identities=24% Similarity=0.465 Sum_probs=27.9
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|..+++..+.++ .|.|....|+|.|....-+.+|++.
T Consensus 81 ~l~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 81 HLKTHTRTHTGEK---PFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp HHHHHHHHHHTCC---CEECCSTTCCCEESSHHHHHHHHHT
T ss_pred HHHHHHHHhcCCC---CeeCCCCCCccccCCHHHHHHHHhc
Confidence 3455666555453 5899544699999999999999864
No 186
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.87 E-value=6.5 Score=27.91 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|. .|+|.|....-+..|+..-
T Consensus 12 ~~~C~--~C~k~f~~~~~L~~H~~~H 35 (46)
T 2en8_A 12 SHTCD--ECGKNFCYISALRIHQRVH 35 (46)
T ss_dssp SEECT--TTCCEESSHHHHHHHHTTT
T ss_pred CeECC--CcCcccCCHHHHHHHHHHh
Confidence 58998 4999999999999998753
No 187
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.28 E-value=5.7 Score=28.33 Aligned_cols=24 Identities=25% Similarity=0.506 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ysp_A 12 PYKCEK--CGKGYNSKFNLDMHQKVH 35 (46)
T ss_dssp SEEETT--TTEEESCHHHHHHHHTTS
T ss_pred CeECCC--CCCccCCHHHHHHHHHhh
Confidence 689984 999999999999999763
No 188
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.24 E-value=3.6 Score=29.09 Aligned_cols=25 Identities=28% Similarity=0.651 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2eox_A 12 SYNCNE--CGKAFTRIFHLTRHQKIHT 36 (44)
T ss_dssp CEEETT--TTEEESSSHHHHTTHHHHC
T ss_pred CeECcc--cCcccCCHHHHHHHHHHhC
Confidence 589985 9999999999999987643
No 189
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.13 E-value=7 Score=27.83 Aligned_cols=24 Identities=21% Similarity=0.414 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yso_A 12 SHQCRE--CGEIFFQYVSLIEHQVLH 35 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHH
T ss_pred CEEccc--cChhhCCHHHHHHHHHHh
Confidence 589985 999999999999998763
No 190
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=48.12 E-value=16 Score=29.60 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=25.6
Q ss_pred cccccCCCCCcccccchhHHHHHHhhhC
Q 004239 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 529 ~K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
..|.|.-.+|+..|+...=+..||+.||
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 3699998999999999999999999998
No 191
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=47.39 E-value=8.7 Score=30.20 Aligned_cols=26 Identities=19% Similarity=0.422 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 17 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 42 (74)
T 2lce_A 17 PYKCDR--CQASFRYKGNLASHKTVHTG 42 (74)
T ss_dssp SBCCTT--SSCCBSCHHHHHHHHHHHCC
T ss_pred CeECCC--CCceeCCHHHHHHHHHHcCC
Confidence 699984 99999999999999976544
No 192
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.33 E-value=6.6 Score=27.99 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en1_A 12 PFKCEE--CGKRFTQNSQLHSHQRVHT 36 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGGS
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 589984 9999999999999997633
No 193
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.72 E-value=7.5 Score=27.67 Aligned_cols=23 Identities=30% Similarity=0.801 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytd_A 12 PYKCSE--CGKAFHRHTHLNEHRRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECCC--CCCeeCChHHHHHHHHH
Confidence 589985 99999999999999875
No 194
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=46.52 E-value=12 Score=33.43 Aligned_cols=40 Identities=28% Similarity=0.457 Sum_probs=29.2
Q ss_pred hhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 516 DPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 516 e~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
..+++....++ .|.|.+..|+|.|....-+..|+..-+.+
T Consensus 79 ~~H~~~h~~~~---~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 79 VNHIRVHTGEK---PFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp HHHTHHHHCCC---SEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred HHHHHhcCCCC---cccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 33444444442 68998777999999999999999865543
No 195
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.45 E-value=5.2 Score=28.54 Aligned_cols=25 Identities=20% Similarity=0.650 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytg_A 12 PFKCGE--CGKSYNQRVHLTQHQRVHT 36 (46)
T ss_dssp SEECTT--TCCEESSSHHHHTTGGGGS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 689985 9999999999999987633
No 196
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.34 E-value=6.7 Score=28.02 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 12 PYKCVE--CGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECcc--cCchhCCHHHHHHHHHH
Confidence 689985 99999999999999876
No 197
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.31 E-value=8 Score=27.51 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 12 PFKCEE--CGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCcCCChHHHHHHHHH
Confidence 589985 99999999999999875
No 198
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=45.26 E-value=8.9 Score=32.80 Aligned_cols=27 Identities=22% Similarity=0.559 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+..|+|.|....-+..|+..-+
T Consensus 62 ~~~C~~~~C~~~f~~~~~l~~H~~~h~ 88 (124)
T 1ubd_C 62 PFQCTFEGCGKRFSLDFNLRTHVRIHT 88 (124)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence 588976679999999999999987543
No 199
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.93 E-value=8.9 Score=29.84 Aligned_cols=26 Identities=12% Similarity=0.285 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 34 (70)
T 1x5w_A 9 PEKCSE--CSYSCSSKAALRIHERIHCT 34 (70)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGCC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcCC
Confidence 689985 99999999999999987443
No 200
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.78 E-value=7.7 Score=27.52 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 12 PCKCTE--CGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCCC--CCCccCCHHHHHHHHHH
Confidence 589985 99999999999999976
No 201
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=44.78 E-value=7 Score=28.36 Aligned_cols=25 Identities=20% Similarity=0.502 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (48)
T 2epr_A 12 QVACEI--CGKIFRDVYHLNRHKLSHS 36 (48)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGSC
T ss_pred CeeCCC--CCcccCCHHHHHHHHHhcC
Confidence 689985 9999999999999987643
No 202
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.36 E-value=6.3 Score=27.44 Aligned_cols=23 Identities=22% Similarity=0.563 Sum_probs=20.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|. .|+|.|....-+..|+..
T Consensus 11 ~~~C~--~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCE--TCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECT--TTCCEESSHHHHHHHTHH
T ss_pred CEeCC--CcChhhCCHHHHHHHHHH
Confidence 58998 599999999999999875
No 203
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.35 E-value=9.1 Score=30.45 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=24.1
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |.|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 15 PYACSH--CDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 589985 999999999999999988764
No 204
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=44.20 E-value=15 Score=34.02 Aligned_cols=40 Identities=25% Similarity=0.438 Sum_probs=27.6
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|..+++..+.++ .|.|.+ |+|.|....-+.+|++.-|.|
T Consensus 148 ~L~~H~~~H~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 148 NLHTHQRTHTGEK---PYKCPE--CGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHHHHCCC---CEECTT--TCCEESSHHHHHHHHTTC---
T ss_pred HHHHHHHhcCCCC---CeECCC--CCCccCCHHHHHHHHHhcCCC
Confidence 4455666655553 688984 999999999999998875554
No 205
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.01 E-value=8.7 Score=30.14 Aligned_cols=25 Identities=28% Similarity=0.712 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |.|.|....-+..|++.-+
T Consensus 14 ~~~C~~--C~k~f~~~~~L~~H~~~h~ 38 (72)
T 1x6e_A 14 PYGCVE--CGKAFSRSSILVQHQRVHT 38 (72)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHGGG
T ss_pred CccCCC--CCCccCCHHHHHHHHHhcC
Confidence 689985 9999999999999998644
No 206
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=42.89 E-value=8.9 Score=32.74 Aligned_cols=27 Identities=26% Similarity=0.450 Sum_probs=23.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|.+ |+|.|....-+.+|++.-|.|
T Consensus 28 ~h~C~~--Cgk~F~~~~~L~~H~~~H~~~ 54 (85)
T 2lv2_A 28 CHLCPV--CGESFASKGAQERHLRLLHAA 54 (85)
T ss_dssp TEECTT--SCCEESSHHHHHHHHHTTSCS
T ss_pred CEECCC--CCCCcCcHHHHhhhhhhccCC
Confidence 689985 999999999999999886655
No 207
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=42.50 E-value=22 Score=37.91 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=40.4
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHH
Q 004239 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWL 273 (766)
Q Consensus 225 lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HK~EeWF 273 (766)
.+=||||+.+++-.+|-+||...-..=-..|.++|+ ++|....+-.||
T Consensus 248 aIGYkE~~~yL~G~~s~~eai~~~~~~TR~yAKRQ~-TWfR~~~~~~w~ 295 (316)
T 3foz_A 248 CVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQI-TWLRGWEGVHWL 295 (316)
T ss_dssp STTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHSCSSCEEE
T ss_pred eeehhhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEe
Confidence 677999999999999999998877766677888886 588887777787
No 208
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=42.22 E-value=23 Score=29.92 Aligned_cols=26 Identities=15% Similarity=0.388 Sum_probs=18.7
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|....-+.+|+..-|.
T Consensus 66 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 66 VFTCSV--CQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred CeECCC--CCCccCCHHHHHHHHHHcCC
Confidence 577774 77888877777777766544
No 209
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=42.16 E-value=14 Score=30.39 Aligned_cols=26 Identities=27% Similarity=0.442 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
-|.|. .|.|.|.....+.+|++.-+.
T Consensus 13 py~C~--~CgK~F~~~s~L~~H~r~Htg 38 (66)
T 2epp_A 13 ILPCG--LCGKVFTDANRLRQHEAQHGV 38 (66)
T ss_dssp CCCCT--TTCCCCSCHHHHHHHHHHHTT
T ss_pred CcCCC--CCCCccCCHHHHHhhhhhhCC
Confidence 58998 599999999999999987443
No 210
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=42.13 E-value=9.5 Score=33.92 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.3
Q ss_pred cccccCCCCCcccccchhHHHHHHhhhChHHHHHHHh
Q 004239 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTS 565 (766)
Q Consensus 529 ~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~Veev~~ 565 (766)
+...|. .|+|.||. +.+||.+.|.---++-+.
T Consensus 20 d~iiCl--ecGK~fK~---LkRHL~~~hgltpeeYR~ 51 (87)
T 2jsp_A 20 DHIVCL--ECGGSFKS---LKRHLTTHHSMTPEEYRE 51 (87)
T ss_dssp SCEECT--BTCCEESB---HHHHHHHTTCSCHHHHHH
T ss_pred CceEec--ccchhhHH---HHHHHHHccCCCHHHHHH
Confidence 578997 69999995 679999999876666544
No 211
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.75 E-value=19 Score=31.84 Aligned_cols=28 Identities=36% Similarity=0.606 Sum_probs=16.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+.+|+|.|....-+.+|+...|.
T Consensus 97 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 97 PYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 4566544466666666666666655453
No 212
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=40.26 E-value=15 Score=32.43 Aligned_cols=26 Identities=27% Similarity=0.434 Sum_probs=16.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|. .|+|.|+...-+..|+...|.
T Consensus 50 pf~C~--~Cgk~F~~~~~L~~H~~r~Ht 75 (102)
T 2ghf_A 50 SYVCV--ECNFLTKRYDALSEHNLKYHP 75 (102)
T ss_dssp CEEET--TTTEEESSTHHHHTHHHHTST
T ss_pred CcCCC--CCCcccCCHHHHHHHHHHhcC
Confidence 46776 377777777777777444453
No 213
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.99 E-value=16 Score=29.70 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
++.|. .|+|.|....-+..|+...|..
T Consensus 25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~ 51 (95)
T 2ej4_A 25 SRPKK--SCDRTFSTMHELVTHVTMEHVG 51 (95)
T ss_dssp SSSCC--CCCCCCSSHHHHHHHHHHTTTC
T ss_pred CCccc--ccccccCCHHHHHHHHHHhccC
Confidence 45576 5999999999999999887754
No 214
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=39.63 E-value=20 Score=30.54 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=20.7
Q ss_pred ccccCCCCCcccc-cchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLF-HAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLF-KgpEFVrKHI~n 554 (766)
.|.|.. |+|.| ....-+.+|+..
T Consensus 34 ~~~C~~--C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 34 SVSCPT--CQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp CEECTT--TCSCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCCcccCHHHHHHHHHH
Confidence 689984 99999 999999999876
No 215
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.11 E-value=8.1 Score=27.51 Aligned_cols=23 Identities=26% Similarity=0.749 Sum_probs=20.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 12 PYKCNE--CGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHTHH
T ss_pred CeECCc--CCchhCCHHHHHHHHHh
Confidence 589985 99999999999999865
No 216
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=36.99 E-value=12 Score=33.70 Aligned_cols=26 Identities=35% Similarity=0.561 Sum_probs=20.4
Q ss_pred ccCCCCCcccccchhHHHHHHhhhCh
Q 004239 532 GCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 532 rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|..+||.+.|....-..||+.+-|.
T Consensus 14 ~CkWPGCe~~~ed~~~FlkHL~~eH~ 39 (93)
T 4i1l_A 14 VCKWPGCEKVFEEPEEFLKHCQADHL 39 (93)
T ss_dssp ----CCSTTTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcccCHHHHHHHhhcccC
Confidence 69999999999999989999998885
No 217
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.78 E-value=22 Score=28.85 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=20.0
Q ss_pred cccCCCCCcccccchhHHHHHHhh
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
|.|. .|+|.|....-+..|++.
T Consensus 63 ~~C~--~C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECP--REGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCS--STTCCCSSHHHHHHHHHH
T ss_pred cCCC--CCCcccCCHHHHHHHHHh
Confidence 7898 499999999999999976
No 218
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.29 E-value=16 Score=28.86 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 18 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 42 (77)
T 2cot_A 18 RYKCDE--CGKSFSHSSDLSKHRRTHT 42 (77)
T ss_dssp SSBCSS--SCCBCSCHHHHHHHHTTTC
T ss_pred CEECCC--CCcccCCHHHHHHHHHHcC
Confidence 689985 9999999999999998643
No 219
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.80 E-value=16 Score=28.89 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|.+ |+|.|.....+..|+..-+.
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~ 32 (78)
T 2d9h_A 7 GLQCEI--CGFTCRQKASLNWHQRKHAE 32 (78)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCCHHHHHHHHHHhhc
Confidence 689985 99999999999999976443
No 220
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=33.09 E-value=22 Score=26.58 Aligned_cols=25 Identities=28% Similarity=0.491 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
|--|. .|-|++..-.-+.|||+--|
T Consensus 9 kqhcr--fckkkysdvknlikhire~h 33 (37)
T 2elu_A 9 KQHCR--FCKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp CCEET--TTTEECSSHHHHHHHHHHTT
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhc
Confidence 55788 59999999999999998776
No 221
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=32.62 E-value=91 Score=33.33 Aligned_cols=49 Identities=18% Similarity=0.411 Sum_probs=41.1
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 004239 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (766)
Q Consensus 225 lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HK~EeWFr 274 (766)
.+=||||+.+++-.+|-+||...-..=-..|.++|+ ++|....+-.||-
T Consensus 240 aIGYkE~~~yL~G~~sl~eaie~i~~~TR~yAKRQ~-TWfR~~~~~~w~~ 288 (322)
T 3exa_A 240 AIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQL-TWFRNKANVTWFD 288 (322)
T ss_dssp STTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTSTTEEEEE
T ss_pred eeeHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH-HHhcCCCCCeEeC
Confidence 577999999999999999998877666677888876 5888888888884
No 222
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=32.54 E-value=3.2 Score=27.69 Aligned_cols=22 Identities=32% Similarity=0.768 Sum_probs=18.5
Q ss_pred cccCCCCCcccccchhHHHHHHhh
Q 004239 531 YGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 531 ~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
|.|. .|+|.|.....+..|+..
T Consensus 3 ~~C~--~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACP--ACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSS--SSCTTHHHHHTTSSSTTS
T ss_pred CCCC--CCCcccCCHHHHHHHHHH
Confidence 7898 499999998888888765
No 223
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=32.16 E-value=32 Score=31.78 Aligned_cols=38 Identities=24% Similarity=0.421 Sum_probs=24.8
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|..+++..+.++ .|.|.+.+|+|.|....-+.+|++.
T Consensus 121 ~L~~H~~~H~~~~---~~~C~~~~C~k~F~~~~~L~~H~~~ 158 (190)
T 1tf6_A 121 QLKVHQFSHTQQL---PYECPHEGCDKRFSLPSRLKRHEKV 158 (190)
T ss_dssp HHHHHHGGGSSSC---SSBCCSSSCCCBCSSHHHHHHHHTS
T ss_pred HHHHHHHHhCCCC---CccCCCCCCCchhcCHHHHHHHHHH
Confidence 3444555444442 5788655588888888888888865
No 224
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=30.27 E-value=18 Score=29.71 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=23.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh-ChHHHH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVI 561 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK-H~E~Ve 561 (766)
+-.|.+ |+++|-+.-=|+-|||.| |=++|.
T Consensus 13 ~~eC~l--C~vkYs~r~slqDHIFs~qHI~~vk 43 (55)
T 2yrk_A 13 KPECTL--CGVKYSARLSIRDHIFSKQHISKVR 43 (55)
T ss_dssp CSCCTT--TTCCCCSSSCHHHHHTSHHHHHHHH
T ss_pred Cccccc--cCcccccccchhhhhccHHHHHHHH
Confidence 458985 999999999999999986 444443
No 225
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=29.99 E-value=44 Score=30.76 Aligned_cols=28 Identities=25% Similarity=0.589 Sum_probs=16.8
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
.|.|....|+|.|....-+.+|+...|.
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHN 99 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 4566533466666666666666665553
No 226
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=29.86 E-value=18 Score=33.87 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=25.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh-ChHHHHHH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVIEL 563 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK-H~E~Veev 563 (766)
.|.|.. |.|.|....-+..|++.| |-..|..+
T Consensus 50 pfyC~~--C~K~F~~~~~L~~H~rsK~HKrrvk~l 82 (124)
T 1zr9_A 50 LHRCLA--CARYFIDSTNLKTHFRSKDHKKRLKQL 82 (124)
T ss_dssp CSEETT--TTEECSSHHHHHHHTTCHHHHHHHHHH
T ss_pred ceEccc--CcchhCCHHHHHHHHhhhhhhHHHHHh
Confidence 799984 999999999999999765 55544443
No 227
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=29.27 E-value=27 Score=32.21 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=26.9
Q ss_pred hhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhhhCh
Q 004239 515 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 557 (766)
Q Consensus 515 ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~nKH~ 557 (766)
|..+++....++ .|.|.+ |+|.|....-+.+|+..-+.
T Consensus 121 l~~H~~~h~~~~---~~~C~~--C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 121 LRAHQRTHTGEK---PYKCPE--CGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp HHHHHHHHHCCC---CEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCC---CeECCC--CCcccCCHHHHHHHHHhcCC
Confidence 445555544442 688984 99999999999999876443
No 228
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=27.92 E-value=18 Score=29.34 Aligned_cols=24 Identities=17% Similarity=0.640 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhHHHHHHhhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
.|.|.. |+|.|....-+..|+..-
T Consensus 3 ~~~C~~--C~k~f~~~~~L~~H~~~H 26 (88)
T 1llm_C 3 PFQCRI--CMRNFSRSDHLTTHIRTH 26 (88)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHHH
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHc
Confidence 588985 999999999999999863
No 229
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces cerevisiae}
Probab=27.30 E-value=68 Score=35.33 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=17.8
Q ss_pred cccccCCCCCcccccchhHHHHHHhhh
Q 004239 529 WKYGCGAKGCTKLFHAAEFVHKHLKLK 555 (766)
Q Consensus 529 ~K~rC~l~gCtKLFKgpEFVrKHI~nK 555 (766)
...-|. -|.|+|+...-...|+.-|
T Consensus 291 ~~l~C~--~c~K~Fs~~~v~~~hL~GK 315 (402)
T 4dgw_A 291 KGIYCP--FCSRWFKTSSVFESHLVGK 315 (402)
T ss_dssp TEECBT--TTTBCBSSHHHHHTTSSSH
T ss_pred cCeeeh--hhhhhhccccccHHHhccc
Confidence 357796 5999999877666665433
No 230
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=26.01 E-value=1.1e+02 Score=32.31 Aligned_cols=49 Identities=16% Similarity=0.248 Sum_probs=39.1
Q ss_pred CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 004239 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (766)
Q Consensus 225 lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HK~EeWFr 274 (766)
.+=||||+.++.-.++-+||...-..==..|.++|+ ++|....+-.||-
T Consensus 254 aIGyke~~~yl~g~~~~~eai~~~~~~Tr~yAKRQ~-TWfr~~~~~~w~~ 302 (323)
T 3crm_A 254 AVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQF-TWLRSWSHLHWMD 302 (323)
T ss_dssp STTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH-HHHHTCSSCEEEE
T ss_pred eecHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeEec
Confidence 678999999999999999998866665566777775 5777777777875
No 231
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.51 E-value=40 Score=25.90 Aligned_cols=24 Identities=29% Similarity=0.241 Sum_probs=19.0
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. .|+|.|....-+..|+.+
T Consensus 36 p~~C~~-~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 36 PVACPN-QCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp EEECTT-CCSCCEEETTTHHHHHHT
T ss_pred CccCCc-ccCcccccHHHHHHHHHh
Confidence 588861 399999988888999865
No 232
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=25.39 E-value=47 Score=30.91 Aligned_cols=48 Identities=25% Similarity=0.337 Sum_probs=38.3
Q ss_pred cccccCCCCCcccccchhHHHHHHhhhChHHHHHHHhh----HHHHHHHhhhcc
Q 004239 529 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSK----VREELYFQNYMN 578 (766)
Q Consensus 529 ~K~rC~l~gCtKLFKgpEFVrKHI~nKH~E~Veev~~k----v~E~~yFNNYl~ 578 (766)
.-..|- .|.+.|...+-+.+|++.+|.==+.+++++ ....+-+-||+.
T Consensus 14 ~~~~CL--FCd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR 65 (121)
T 1wir_A 14 QHTPCL--FCDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIR 65 (121)
T ss_dssp CCEECS--SSCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CceeEe--cCCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeee
Confidence 357897 699999999999999999998555555544 446677889998
No 233
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=25.07 E-value=51 Score=29.78 Aligned_cols=36 Identities=36% Similarity=0.476 Sum_probs=27.6
Q ss_pred hhhhHHHhhhhcccCcccccCCCCCcccccchhHHHHHHhh
Q 004239 514 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 514 ~ve~fVkk~~dEk~g~K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|..+++..+.|+ .|.|.. |+|.|.....+..|+..
T Consensus 37 ~L~~H~~~H~~~k---~~~C~~--C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 37 SLRRHFNIHSWEK---KYPCRY--CEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp HHHHHHHHHHCCS---CEECSS--SSCEESSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC---CeeCCc--cCeecccccchhhhccc
Confidence 4455666655553 689984 99999999999999864
No 234
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=24.43 E-value=33 Score=24.88 Aligned_cols=21 Identities=19% Similarity=0.466 Sum_probs=19.1
Q ss_pred ccccCCCCCcccccchhHHHHHH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHL 552 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI 552 (766)
-|.|. .|+|-|....-+.+|+
T Consensus 8 p~~C~--~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCL--PCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEET--TTTEECSCHHHHHHHH
T ss_pred CeECC--CCCCccCCHhHccCcC
Confidence 58898 5999999999999998
No 235
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.78 E-value=26 Score=26.98 Aligned_cols=25 Identities=28% Similarity=0.436 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhChH
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 558 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH~E 558 (766)
.|.|. .|+|.|. ..-+.+|+.. +++
T Consensus 10 ~~~C~--~C~k~f~-~~~L~~H~~~-~~~ 34 (66)
T 2eod_A 10 TQPCT--YCTKEFV-FDTIQSHQYQ-CPR 34 (66)
T ss_dssp EEECS--SSCCEEE-HHHHHHHHHH-CSS
T ss_pred Ceecc--ccCCccC-HHHHHHHHHH-cCC
Confidence 58898 5999999 9999999876 554
No 236
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=23.71 E-value=35 Score=27.13 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=20.5
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
-|.|.. |+|.|....-+..|++.
T Consensus 4 py~C~~--C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCNF--CGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCEeCCHHHHHHHHHH
Confidence 589984 99999999999999875
No 237
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=22.90 E-value=33 Score=29.06 Aligned_cols=19 Identities=37% Similarity=0.483 Sum_probs=16.6
Q ss_pred CChhHHHHHHHHHHHHHHH
Q 004239 366 SEPRRIQVDIEQAQALVRK 384 (766)
Q Consensus 366 S~p~RI~~DLeqAr~LV~k 384 (766)
+..+||++||.+|+.||+-
T Consensus 36 ~~~ERLkR~I~hAr~LVrE 54 (65)
T 2kw6_A 36 SAMERLKRGIIHARGLVRE 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3568999999999999974
No 238
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=21.79 E-value=40 Score=28.59 Aligned_cols=23 Identities=22% Similarity=0.612 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhh
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKL 554 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~n 554 (766)
.|.|.. |+|.|.....+..|+..
T Consensus 25 py~C~~--C~k~F~~~~~L~~H~~~ 47 (88)
T 1x6f_A 25 TYQCKH--CDSKLQSTAELTSHLNI 47 (88)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CCcCCC--CCCEeCCHHHHHHHHHH
Confidence 589985 99999999999999875
No 239
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=20.51 E-value=59 Score=34.78 Aligned_cols=50 Identities=18% Similarity=0.444 Sum_probs=40.3
Q ss_pred CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHHh
Q 004239 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWLK 274 (766)
Q Consensus 224 ~lmsFKqFl~~~eD~IspeEA~~rY~eYK~ef~~kq~r~FF~~HK~EeWFr 274 (766)
..+=||||+.+++-.+|-+||...-..==..|.++|+ ++|....+-.||-
T Consensus 245 ~aIGyke~~~yl~g~~~~~ea~~~~~~~Tr~yAKRQ~-TWfr~~~~~~w~~ 294 (340)
T 3d3q_A 245 QAIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQL-TWFKNKMNVHWLN 294 (340)
T ss_dssp GSTTTTTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHH-HHHHHTCCCEEEE
T ss_pred hhccHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-HHhCCCCCCeeec
Confidence 3678999999999999999998877776777888875 5777777777874
No 240
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=20.15 E-value=45 Score=28.79 Aligned_cols=24 Identities=17% Similarity=0.527 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhHHHHHHhhhC
Q 004239 530 KYGCGAKGCTKLFHAAEFVHKHLKLKH 556 (766)
Q Consensus 530 K~rC~l~gCtKLFKgpEFVrKHI~nKH 556 (766)
.|.|.. |+|.|....-+..|+.. |
T Consensus 74 ~~~C~~--C~k~f~~~~~l~~H~~~-H 97 (129)
T 2wbt_A 74 QFVCPL--CLMPFSSSVSLKQHIRY-T 97 (129)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH-T
T ss_pred CeECCC--CCcccCCHhHHHHHHHH-C
Confidence 699985 99999999999999976 5
Done!