Query 004240
Match_columns 766
No_of_seqs 333 out of 621
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 18:46:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fo5_A Thioesterase, adipose a 100.0 4.6E-38 1.6E-42 328.7 15.7 208 203-432 37-248 (258)
2 3p0l_A Steroidogenic acute reg 100.0 3.7E-34 1.3E-38 289.9 21.1 186 231-432 29-216 (221)
3 2r55_A STAR-related lipid tran 100.0 1.6E-33 5.4E-38 286.5 24.5 187 231-431 41-229 (231)
4 1jss_A Stard4, cholesterol-reg 100.0 1.3E-33 4.3E-38 287.1 21.1 182 232-430 42-223 (224)
5 2pso_A STAR-related lipid tran 100.0 2.2E-33 7.4E-38 289.2 22.0 184 231-435 48-232 (237)
6 1em2_A MLN64 protein; beta bar 100.0 3.5E-33 1.2E-37 284.0 21.3 187 230-432 39-227 (229)
7 3qsz_A STAR-related lipid tran 100.0 3E-29 1E-33 247.1 22.7 178 232-431 2-180 (189)
8 1ln1_A PC-TP, phosphatidylchol 100.0 2.1E-28 7.3E-33 244.8 21.4 180 231-431 26-210 (214)
9 2e3n_A Lipid-transfer protein 100.0 1.3E-28 4.4E-33 254.4 19.7 193 228-431 42-247 (255)
10 2w2x_D 1-phosphatidylinositol- 99.3 1.6E-12 5.6E-17 120.4 7.3 108 44-156 10-121 (124)
11 2d9x_A Oxysterol binding prote 99.0 1.2E-09 4.1E-14 99.6 11.4 103 44-160 6-110 (120)
12 1v88_A Oxysterol binding prote 99.0 2.1E-09 7.2E-14 101.0 11.0 100 42-154 4-124 (130)
13 4a6h_A Phosphatidylinositol 4, 99.0 4.1E-09 1.4E-13 98.0 12.4 103 46-153 6-117 (120)
14 2yry_A Pleckstrin homology dom 99.0 7.3E-09 2.5E-13 93.7 13.8 101 44-154 20-120 (122)
15 2rsg_A Collagen type IV alpha- 99.0 1.6E-09 5.5E-14 94.3 8.7 92 46-152 1-92 (94)
16 2dhk_A TBC1 domain family memb 99.0 5.5E-09 1.9E-13 95.4 12.5 99 43-155 5-105 (119)
17 1u5d_A SKAP55, SRC kinase-asso 99.0 4.2E-09 1.5E-13 92.6 11.3 102 45-154 2-105 (108)
18 2dkp_A Pleckstrin homology dom 98.9 7.6E-09 2.6E-13 94.4 13.3 101 44-154 19-119 (128)
19 2da0_A 130-kDa phosphatidylino 98.9 4.9E-09 1.7E-13 94.9 11.7 96 44-156 8-103 (114)
20 2dn6_A KIAA0640 protein; PH do 98.9 6.4E-09 2.2E-13 93.0 12.3 101 43-156 5-105 (115)
21 1unq_A RAC-alpha serine/threon 98.9 3E-09 1E-13 97.2 10.1 104 44-157 6-113 (125)
22 2cod_A Centaurin-delta 1; ARF 98.9 8.1E-09 2.8E-13 93.0 12.2 94 44-154 6-99 (115)
23 1v89_A Hypothetical protein KI 98.9 1.4E-08 4.7E-13 90.9 13.6 103 43-154 5-112 (118)
24 1u5f_A SRC-associated adaptor 98.9 7.3E-09 2.5E-13 97.8 12.2 109 38-154 9-119 (148)
25 1fao_A Dual adaptor of phospho 98.9 5.7E-09 2E-13 95.3 11.0 105 42-160 14-118 (126)
26 1wgq_A FYVE, rhogef and PH dom 98.9 2E-08 6.9E-13 89.5 13.0 101 41-154 3-103 (109)
27 1eaz_A Tandem PH domain contai 98.9 9.1E-09 3.1E-13 93.3 10.9 102 43-155 11-112 (125)
28 1upq_A PEPP1; PH domain, phosp 98.9 1.4E-08 4.9E-13 91.9 12.0 100 45-154 10-109 (123)
29 2y7b_A Actin-binding protein a 98.9 6.9E-09 2.4E-13 95.6 9.8 108 44-155 3-129 (134)
30 1wi1_A Calcium-dependent activ 98.9 9.3E-09 3.2E-13 96.7 10.4 100 44-155 6-111 (126)
31 1fgy_A GRP1; PH domain, signal 98.8 2.1E-08 7.1E-13 91.0 12.3 99 44-154 3-120 (127)
32 2d9y_A Pleckstrin homology dom 98.8 1.9E-08 6.4E-13 90.2 11.6 101 44-154 9-109 (117)
33 1v5u_A SBF1, SET binding facto 98.8 5.9E-09 2E-13 93.5 8.2 101 42-154 4-111 (117)
34 3rcp_A Pleckstrin homology dom 98.8 9.9E-09 3.4E-13 90.5 9.4 93 48-154 1-93 (103)
35 2i5f_A Pleckstrin; PH domain, 98.8 2.5E-08 8.4E-13 88.3 12.0 100 44-153 5-108 (109)
36 1pls_A Pleckstrin homology dom 98.8 4.8E-08 1.6E-12 87.5 12.7 100 44-155 3-102 (113)
37 1u5e_A SRC-associated adaptor 98.8 3E-08 1E-12 100.3 12.6 109 38-154 98-208 (211)
38 1wg7_A Dedicator of cytokinesi 98.8 2E-08 7E-13 94.6 10.5 101 44-154 16-124 (150)
39 3aj4_A Pleckstrin homology dom 98.8 1E-08 3.6E-13 91.7 7.6 104 45-154 4-111 (112)
40 1x1f_A Signal-transducing adap 98.8 8.3E-08 2.9E-12 92.4 13.9 95 46-154 18-113 (149)
41 1x05_A Pleckstrin; PH domain, 98.8 4.7E-08 1.6E-12 89.5 11.6 102 43-154 15-120 (129)
42 2cof_A Protein KIAA1914; PH do 98.8 1.6E-08 5.4E-13 90.3 8.1 96 44-154 6-101 (107)
43 2d9v_A Pleckstrin homology dom 98.7 5.3E-08 1.8E-12 90.4 11.7 101 44-154 6-114 (130)
44 1btn_A Beta-spectrin; signal t 98.7 1.5E-08 5E-13 89.3 6.5 99 48-152 1-106 (106)
45 2j59_M RHO-GTPase activating p 98.7 3.7E-08 1.3E-12 94.8 9.5 101 45-154 2-111 (168)
46 1dyn_A Dynamin; signal transdu 98.7 8.6E-08 2.9E-12 89.8 11.5 99 46-152 12-115 (125)
47 2coc_A FYVE, rhogef and PH dom 98.7 8.3E-08 2.8E-12 88.2 10.1 98 42-154 4-106 (112)
48 1btk_A Bruton'S tyrosine kinas 98.6 8.7E-08 3E-12 93.7 10.1 106 45-154 2-132 (169)
49 1v5p_A Pleckstrin homology dom 98.6 1.4E-07 4.7E-12 88.1 10.6 101 46-154 15-120 (126)
50 3tfm_A Myosin X; split PH doma 98.6 1.3E-07 4.4E-12 96.5 11.2 100 42-154 54-155 (228)
51 1wjm_A Beta-spectrin III; PH d 98.6 1.1E-07 3.7E-12 86.8 9.6 106 44-154 6-117 (123)
52 1x1g_A Pleckstrin 2; PH domain 98.6 1.9E-07 6.4E-12 85.4 10.8 102 43-154 15-124 (129)
53 2p0d_A RHO GTPase-activating p 98.6 5.1E-07 1.7E-11 84.1 12.7 105 44-155 10-125 (129)
54 2lul_A Tyrosine-protein kinase 98.6 1.6E-07 5.6E-12 91.0 9.7 105 44-154 13-121 (164)
55 3cxb_B Pleckstrin homology dom 98.6 2.3E-07 7.9E-12 84.2 10.0 96 48-154 2-101 (112)
56 2rlo_A Centaurin-gamma 1; spli 98.5 2.1E-07 7.3E-12 85.8 7.8 105 45-155 3-125 (128)
57 3tca_A Amyloid beta A4 precurs 98.5 5E-07 1.7E-11 93.7 10.4 107 44-154 166-276 (291)
58 2fjl_A 1-phosphatidylinositol- 98.4 1.1E-06 3.6E-11 85.0 11.0 102 48-154 3-148 (150)
59 3a8p_A T-lymphoma invasion and 98.4 1.2E-06 4.1E-11 91.6 12.0 109 41-156 6-126 (263)
60 2dtc_A RAL guanine nucleotide 98.4 1.3E-06 4.4E-11 82.2 10.3 101 47-154 2-112 (126)
61 1dro_A Beta-spectrin; cytoskel 98.4 3.9E-07 1.3E-11 83.4 6.6 105 44-154 6-119 (122)
62 3pp2_A RHO GTPase-activating p 98.3 2.7E-06 9.3E-11 78.6 11.4 105 43-154 5-123 (124)
63 2r09_A Cytohesin-3; autoinhibi 98.3 3.3E-06 1.1E-10 91.4 12.0 98 45-154 212-328 (347)
64 4h8s_A DCC-interacting protein 98.3 2.8E-06 9.5E-11 93.3 11.4 99 44-155 299-399 (407)
65 1qqg_A IRS-1, insulin receptor 98.2 9.4E-07 3.2E-11 92.5 6.3 97 44-154 8-112 (264)
66 3lju_X ARF-GAP with dual PH do 98.2 4.4E-06 1.5E-10 91.8 11.2 103 43-154 266-372 (386)
67 2q13_A DCC-interacting protein 98.0 1.4E-05 4.9E-10 87.0 10.1 99 44-154 276-375 (385)
68 4ejn_A RAC-alpha serine/threon 97.9 2.3E-05 7.7E-10 86.0 10.2 103 44-154 4-108 (446)
69 2rov_A RHO-associated protein 97.9 9.3E-06 3.2E-10 75.0 5.9 107 47-154 2-115 (117)
70 2ys3_A UNC-112-related protein 97.9 4E-05 1.4E-09 72.9 9.6 104 44-153 7-111 (137)
71 3lju_X ARF-GAP with dual PH do 97.8 3.2E-05 1.1E-09 85.0 7.7 98 46-154 146-246 (386)
72 2d9w_A Docking protein 2; PH d 97.6 0.00058 2E-08 64.1 12.0 105 44-153 10-120 (127)
73 3hk0_A Growth factor receptor- 97.5 0.00022 7.4E-09 74.5 9.6 107 43-154 129-240 (256)
74 4gmv_A RAS-associated and plec 97.5 0.0003 1E-08 74.4 9.2 106 44-154 156-266 (281)
75 2d9z_A Protein kinase C, NU ty 97.4 0.00083 2.8E-08 63.1 10.4 110 41-154 3-123 (129)
76 2coa_A Protein kinase C, D2 ty 97.2 0.0015 5.1E-08 61.2 9.9 103 41-154 3-119 (125)
77 3a8n_A TIAM-1, T-lymphoma inva 97.1 0.00056 1.9E-08 72.3 7.0 108 41-154 6-124 (279)
78 3tl1_A WHIE ORF VI, polyketide 96.7 0.043 1.5E-06 52.8 15.7 143 261-431 5-147 (159)
79 4f7h_A Fermitin family homolog 96.7 0.014 4.9E-07 57.1 12.0 106 43-154 44-150 (173)
80 4bbk_A Kindlin-1, fermitin fam 96.6 0.017 5.7E-07 56.2 11.7 106 43-154 23-129 (165)
81 2d4r_A Hypothetical protein TT 96.4 0.19 6.7E-06 44.5 16.9 140 260-430 3-144 (147)
82 3tfz_A Cyclase; helix-GRIP, BE 96.4 0.12 3.9E-06 49.7 16.3 148 258-430 4-159 (172)
83 1t17_A Conserved hypothetical 96.3 0.083 2.9E-06 48.9 14.6 114 259-399 2-118 (148)
84 3tvq_A Multifunctional cyclase 96.3 0.073 2.5E-06 51.7 14.7 143 261-431 5-147 (169)
85 2pcs_A Conserved protein; stru 95.7 0.24 8.1E-06 46.2 14.6 143 261-431 5-149 (162)
86 3p9v_A Uncharacterized protein 95.3 0.74 2.5E-05 43.6 16.7 113 260-399 8-122 (161)
87 3ggn_A Uncharacterized protein 95.2 0.31 1.1E-05 45.7 13.9 143 259-432 4-148 (155)
88 3qwm_A Iqsec1, IQ motif and SE 95.1 0.12 4.2E-06 49.3 10.4 106 46-157 13-125 (140)
89 2ns9_A Hypothetical protein AP 95.0 1.1 3.7E-05 41.1 16.6 140 260-429 14-155 (157)
90 3f08_A Uncharacterized protein 94.8 0.7 2.4E-05 43.4 15.0 137 260-431 3-139 (146)
91 1v61_A RAC/CDC42 guanine nucle 94.1 0.094 3.2E-06 49.5 6.9 82 64-156 43-128 (132)
92 2le1_A Uncharacterized protein 91.7 2.2 7.5E-05 39.3 12.6 141 260-433 3-146 (151)
93 1w1g_A HPDK1, 3-phosphoinositi 91.5 0.62 2.1E-05 45.0 8.6 91 43-154 49-139 (151)
94 3p51_A Uncharacterized protein 90.1 8.6 0.00029 36.7 15.4 139 260-431 3-143 (160)
95 3ijt_A SMU.440, putative uncha 90.0 5.7 0.00019 37.6 14.0 37 259-297 18-54 (155)
96 1xcg_A PDZ-rhogef, RHO guanine 89.3 2.1 7E-05 45.6 11.5 106 43-156 250-368 (368)
97 1mai_A Phospholipase C delta-1 88.8 0.9 3.1E-05 42.1 7.2 99 50-155 17-122 (131)
98 2dfk_A Collybistin II; DH doma 88.5 4.7 0.00016 43.8 13.8 113 43-160 254-369 (402)
99 1kz7_A Guanine nucleotide exch 87.7 2.7 9.2E-05 44.9 11.0 111 44-160 208-331 (353)
100 2pz1_A RHO guanine nucleotide 87.5 4.4 0.00015 44.7 13.0 108 44-156 332-442 (466)
101 3mpx_A FYVE, rhogef and PH dom 86.6 1.2 4.1E-05 48.5 7.7 97 44-155 242-338 (434)
102 1nty_A Triple functional domai 86.5 4.5 0.00015 42.1 11.7 107 44-156 201-310 (311)
103 3p6a_A RHO guanine nucleotide 85.8 3.6 0.00012 43.8 10.8 102 44-154 257-371 (377)
104 3odw_A RHO guanine nucleotide 85.1 3.8 0.00013 46.5 11.1 104 44-156 410-526 (536)
105 2qpv_A Uncharacterized protein 85.0 12 0.00042 35.6 13.0 35 260-296 28-62 (156)
106 1txd_A RHO guanine nucleotide 84.6 6.2 0.00021 42.3 12.0 105 44-157 255-372 (385)
107 2vrw_B P95VAV, VAV1, proto-onc 84.4 6 0.00021 42.8 11.9 105 44-156 232-337 (406)
108 1tw0_A Pathogenesis-related cl 82.3 34 0.0012 32.3 15.1 150 261-433 5-155 (157)
109 1e09_A PRU AV 1; allergen, maj 81.1 19 0.00064 34.1 12.5 149 261-433 5-156 (159)
110 3zvr_A Dynamin-1; hydrolase, D 80.4 5.3 0.00018 47.6 10.2 98 46-152 540-643 (772)
111 3ky9_A Proto-oncogene VAV; cal 79.2 9.6 0.00033 43.5 11.6 105 44-156 404-509 (587)
112 3t06_A PDZ-rhogef, RHO guanine 78.0 14 0.00049 39.8 12.0 105 43-155 292-409 (418)
113 2qim_A PR10.2B; trans-zeatin, 76.4 33 0.0011 32.4 12.6 150 260-433 5-156 (158)
114 3kl1_A PYL2, putative uncharac 75.6 19 0.00066 35.5 11.1 116 265-399 41-158 (190)
115 1dbh_A Protein (human SOS 1); 74.0 13 0.00046 39.1 10.2 99 44-154 245-349 (354)
116 2rgn_B RHOA/RAC/CDC42 exchange 73.0 14 0.00047 39.3 10.1 112 44-158 205-323 (354)
117 3rt2_A Abscisic acid receptor 72.5 53 0.0018 32.2 13.4 139 264-430 32-176 (183)
118 2lg1_A A-kinase anchor protein 70.9 27 0.00094 34.1 10.9 102 44-155 69-173 (185)
119 1icx_A Protein LLR18A, LLPR10. 69.9 44 0.0015 31.4 11.7 149 261-433 5-154 (155)
120 1zc3_B Exocyst complex protein 67.3 65 0.0022 28.9 11.8 98 46-154 8-107 (113)
121 2z0q_A XPLN, RHO guanine nucle 66.0 8.4 0.00029 40.6 6.5 96 45-154 231-346 (346)
122 3tfm_A Myosin X; split PH doma 63.4 10 0.00034 38.1 6.1 48 42-98 17-64 (228)
123 3jzy_A Intersectin 2; C2 domai 61.8 1.7 5.7E-05 48.2 0.0 100 44-156 251-364 (510)
124 3ksy_A SOS-1, SON of sevenless 60.1 24 0.00082 43.4 9.8 99 44-154 442-546 (1049)
125 3jrs_A PYL1, putative uncharac 60.1 55 0.0019 32.9 10.8 136 265-431 60-205 (208)
126 3oqu_A Abscisic acid receptor 49.7 2.1E+02 0.0072 28.6 14.6 138 266-431 59-201 (205)
127 2flh_A Cytokinin-specific bind 49.2 1.7E+02 0.0058 27.4 15.3 118 260-399 4-126 (155)
128 2i9y_A Major latex protein-lik 46.7 1.9E+02 0.0066 27.3 12.4 144 260-431 18-165 (166)
129 3k3k_A Abscisic acid receptor 43.4 1.9E+02 0.0064 29.1 11.5 48 265-314 56-104 (211)
130 3ml4_A Protein DOK-7; tyrosine 34.4 1.8E+02 0.006 29.7 9.6 97 44-152 7-111 (224)
131 3rws_A MTN13 protein; zeatin, 33.4 3.3E+02 0.011 26.0 11.6 119 260-398 10-130 (168)
132 2pk2_A Cyclin-T1, protein TAT; 32.3 9.5 0.00033 41.2 0.0 8 57-64 325-332 (358)
133 3q6a_A Uncharacterized protein 30.1 44 0.0015 29.8 4.1 29 261-291 3-31 (135)
134 1foe_A T-lymphoma invasion and 30.0 5E+02 0.017 27.2 13.1 26 129-154 341-366 (377)
135 2vjg_A Major allergen DAU C 1; 27.5 3.2E+02 0.011 25.6 9.8 120 260-399 5-126 (154)
136 2leq_A Uncharacterized protein 23.8 42 0.0014 29.5 2.7 30 259-290 5-34 (146)
137 1v5m_A SH2 and PH domain-conta 22.3 5E+02 0.017 24.5 10.0 96 45-154 17-130 (136)
138 3pu2_A Uncharacterized protein 21.0 82 0.0028 29.3 4.2 31 259-291 13-43 (164)
139 2l8o_A Uncharacterized protein 20.8 33 0.0011 31.2 1.4 28 260-289 3-30 (144)
No 1
>3fo5_A Thioesterase, adipose associated, isoform BFIT2; orthogonal bundle, consortium, lipid transport; HET: 1PE TCE; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=328.67 Aligned_cols=208 Identities=16% Similarity=0.185 Sum_probs=176.8
Q ss_pred CCcccCCCCCCCCccCccccCCcc--cccccCCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEeecCCHHHHHHHHhc
Q 004240 203 ETLLRQSSDLGGSVRGEGFFEGDI--GDAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLN 280 (766)
Q Consensus 203 ~~~~~~w~~~~~~~~~~ls~~~~~--~~~~a~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d 280 (766)
..+|++||++||+ ||+|+|++ +++++++||++..+++||+||+++.. ..+.||++++|++||++||++|+|
T Consensus 37 ~p~~~~w~~~~~~---~l~~~n~~al~~l~~~~gW~~~~~~~gv~Vy~~~~~----~~l~~k~~~~v~~~~~~v~~~L~D 109 (258)
T 3fo5_A 37 VPLSVPWDPSNQV---YLSYNNVSSLKMLVAKDNWVLSSEISQVRLYTLEDD----KFLSFHMEMVVHVDAAQAFLLLSD 109 (258)
T ss_dssp SCSEEECCGGGHH---HHHHHHHHHHHHHHTCSCCEEEEEETTEEEEEEECS----SCEEEEEEEEESSCHHHHHHHHHC
T ss_pred CCcccccCcccce---ecccCCHHHHHhhhccCCCEEEecCCCeEEEEEECC----CceEEEEEEEEeCCHHHHHHHHhC
Confidence 4589999999999 99999996 89999999999999999999998542 257899999999999999999999
Q ss_pred CCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEc-cCC-eEEEEEeeccCCCCCCCCC
Q 004240 281 LERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG-TYTILQFPAVHKKRPPKSG 358 (766)
Q Consensus 281 ~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~-~dG-sYVIa~~SV~Hp~~Pp~~G 358 (766)
+++ |++||+++.++++|+++|++ +++|+...|.. ++++++||||++|+||+. .+| .|+|+++||+||.+||++|
T Consensus 110 ~~~--R~~WD~~~~~~~vle~id~~-~ivY~~~~p~~-~~~v~~RDFV~lr~~r~~~~~G~~yvi~~~SV~hp~~Pp~~g 185 (258)
T 3fo5_A 110 LRQ--RPEWDKHYRSVELVQQVDED-DAIYHVTSPAL-GGHTKPQDFVILASRRKPCDNGDPYVIALRSVTLPTHRETPE 185 (258)
T ss_dssp GGG--GGGTCTTCCEEEEEEEEETT-EEEEEEEECCC-TTCSSCEEEEEEEEEECCSSTTCCEEEEEEEEECTTSCCCTT
T ss_pred chh--HhHhhhhccEEEEEEEcCCC-eEEEEEecCCc-cCCCCCCEEEEEEEEEeccCCCCEEEEEEEeccCCCCCCCCC
Confidence 876 99999999999999999999 78887766642 267999999999999874 356 5999999999999999999
Q ss_pred eEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHHHHHHHHHHHHhhcCC
Q 004240 359 YRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 432 (766)
Q Consensus 359 yVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~ 432 (766)
||||++++|||+|+|+++ +.|+|||+.|+|+ |.+ |.|...+.+ +...+.+...+|++++..+.
T Consensus 186 ~VR~~~~~sg~~I~P~~~------~~t~VtY~~q~dp-G~l---P~~~~n~~g-~s~~~~~t~~~~~~fl~~~~ 248 (258)
T 3fo5_A 186 YRRGETLCSGFCLWREGD------QLTKVSYYNQATP-GVL---NYVTTNVAG-LSSEFYTTFKACEQFLLDNR 248 (258)
T ss_dssp SEECCCSSEEEEEEEEET------TEEEEEEEESCCG-GGH---HHHHHHHHT-SCCHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEcCcEEEEEECCC------CCEEEEEEEeeCC-CCC---CceEEeccc-cchHHHHHHHHHHHHHHhcc
Confidence 999999999999999986 6899999999999 557 333222222 12233466778999988753
No 2
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=289.92 Aligned_cols=186 Identities=18% Similarity=0.264 Sum_probs=159.3
Q ss_pred cCCCCEEEE-EeCCEEEEEEecCCCCCcceEEEEEEeecCCHHHHHHHHh-cCCCcccccccCCCCceEEEEeecCceEE
Q 004240 231 EAHEWKCVR-TLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDV 308 (766)
Q Consensus 231 a~sgWkl~~-~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~-d~~~~~R~~WD~~~~e~eVVE~lD~~tDI 308 (766)
+++||++.. +++|++||++..+ +. +.++|++++|+++|++||++|+ |.+. |++||+++.++++|+++|++++|
T Consensus 29 ~~~gW~~~~~~~~gv~vy~~~~~--~~-g~~~k~~~~v~~~~~~v~~~l~~d~~~--r~~Wd~~~~~~~vle~~~~~t~I 103 (221)
T 3p0l_A 29 NQEGWKKESQQDNGDKVMSKVVP--DV-GKVFRLEVVVDQPMERLYEELVERMEA--MGEWNPNVKEIKVLQKIGKDTFI 103 (221)
T ss_dssp SCTTCEEEEECTTSCEEEEEECS--SS-CEEEEEEEEESSCHHHHHHHHTTTGGG--TTTSCTTCSEEEEEEECSSSEEE
T ss_pred CCCCCeEeeecCCCcEEEEEEcC--CC-ceEEEEEEEEcCCHHHHHHHHHhccch--hhhcCcchheEEEEEecCCCeEE
Confidence 578999995 8999999999753 22 5899999999999999999995 7766 99999999999999999999999
Q ss_pred EEEEeccCcCCCCCCCCeEEEEEEEEEccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEE
Q 004240 309 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 388 (766)
Q Consensus 309 vY~~~kp~~lP~~vspRDFV~LRswRr~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT 388 (766)
+|++.++ ++++++++||||++|+|++. +|.|+++.+||+||.+||++|||||+++++||+|+|+++ ++++|+||
T Consensus 104 ~y~~~~~-~~~~~v~~RDfv~~r~~~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~----~~~~t~vt 177 (221)
T 3p0l_A 104 THELAAE-AAGNLVGPRDFVSVRCAKRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAG----SPSKTKLT 177 (221)
T ss_dssp EEEEECC----CCSCCEEEEEEEEEEEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETT----EEEEEEEE
T ss_pred EEEeecc-ccCCccCCceEEEEEEEEEc-CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCC----CCCcEEEE
Confidence 9987765 23467999999999999986 578999999999999999999999999999999999985 34589999
Q ss_pred EEEeeecCCccccccCCcccchhhhHHHHHHHHHHHHHHhhcCC
Q 004240 389 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 432 (766)
Q Consensus 389 ~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~ 432 (766)
|++|+||+||+ |.| .+.+.+...|+.++.+||+.++..+
T Consensus 178 ~~~~~Dp~G~i---P~~--lvn~~~~~~~~~~~~~Lr~~~~~~~ 216 (221)
T 3p0l_A 178 WLLSIDLKGWL---PKS--IINQVLSQTQVDFANHLRKRLESHP 216 (221)
T ss_dssp EEECEECCSSC---CHH--HHHHHHHHHHHHHHHHHHHHTC---
T ss_pred EEEEecCCCCC---CHH--HHHHHHHHHHHHHHHHHHHHHhhch
Confidence 99999999999 442 2335566778899999999998543
No 3
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.6e-33 Score=286.50 Aligned_cols=187 Identities=21% Similarity=0.213 Sum_probs=161.3
Q ss_pred cCCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEeecCCHHHHHHHH--hcCCCcccccccCCCCceEEEEeecCceEE
Q 004240 231 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVV--LNLERHQRYEWDMLTGDLELVDSYDGHYDV 308 (766)
Q Consensus 231 a~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L--~d~~~~~R~~WD~~~~e~eVVE~lD~~tDI 308 (766)
++.+|+++.+++|++||++... +..+.++|++++|+++|++||++| +|.+. |.+||+++.++++|+++|++++|
T Consensus 41 ~~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~~~d~~~--r~~Wd~~~~~~~vle~i~~~~~i 116 (231)
T 2r55_A 41 DTAGWKICREGNGVSVSWRPSV--EFPGNLYRGEGIVYGTLEEVWDCVKPAVGGL--RVKWDENVTGFEIIQSITDTLCV 116 (231)
T ss_dssp CCSSCEEEECCSSEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHCC--CCS--HHHHCTTCSEEEEEEECSSSEEE
T ss_pred CCCCCEEEEeCCCEEEEEEccC--CCCCcEEEEEEEECCCHHHHHHHHHhhCcch--hhhhccccceeEEEEEcCCCEEE
Confidence 3579999999999999999763 345789999999999999999999 77766 99999999999999999999999
Q ss_pred EEEEeccCcCCCCCCCCeEEEEEEEEEccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEE
Q 004240 309 VYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVT 388 (766)
Q Consensus 309 vY~~~kp~~lP~~vspRDFV~LRswRr~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT 388 (766)
+|+...+ ++++++++||||++|+|++.++|+|+|+.+||+||.+||.+|||||++.++||+|+|+++ ++++|+||
T Consensus 117 ~~~~~~~-~~~~~v~~RDfv~~r~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t~vt 191 (231)
T 2r55_A 117 SRTSTPS-AAMKLISPRDFVDLVLVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPG----EPTKTNLV 191 (231)
T ss_dssp EEEECCC-BTTTTBCCEEEEEEEEEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC------CCCEEEE
T ss_pred EEEEecc-ccCCccCCCeEEEEEEEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCC----CCCcEEEE
Confidence 8876554 345689999999999999998899999999999999999999999999999999999974 23689999
Q ss_pred EEEeeecCCccccccCCcccchhhhHHHHHHHHHHHHHHhhcC
Q 004240 389 QMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGAN 431 (766)
Q Consensus 389 ~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~ 431 (766)
|+.++||+||+ |.| .+...+...|+..+++||++++..
T Consensus 192 ~~~~~Dp~G~i---P~~--lvn~~~~~~~~~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 192 TFFHTDLSGYL---PQN--VVDSFFPRSMTRFYANLQKAVKQF 229 (231)
T ss_dssp EEECEECCSSC---CHH--HHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred EEEEeCCCCCc---cHH--HHHHHHhHhHHHHHHHHHHHHHHh
Confidence 99999999999 432 223446667889999999998764
No 4
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=100.00 E-value=1.3e-33 Score=287.14 Aligned_cols=182 Identities=18% Similarity=0.272 Sum_probs=159.0
Q ss_pred CCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEE
Q 004240 232 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 311 (766)
Q Consensus 232 ~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~ 311 (766)
.++|++..+++||+||++... +..+.++|++++|+++|++||++|+|... |++||+++.++++||++|++++|+|+
T Consensus 42 ~~~W~~~~~~~gv~vy~~~~~--~~~~~~~k~~~~v~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~id~~~~I~y~ 117 (224)
T 1jss_A 42 EDEWRVAKKAKDVTVWRKPSE--EFNGYLYKAQGVMDDVVNNVIDHIRPGPW--RLDWDRLMTSLDVLEHFEENCCVMRY 117 (224)
T ss_dssp GGGCEEEEEETTEEEEEEECS--SSSSEEEEEEEEESSCHHHHHHHHSSSTT--HHHHCSSEEEEEEEEECSTTEEEEEE
T ss_pred CCCCEEEEECCCEEEEEEecc--CCCceEEEEEEEEeCCHHHHHHHHhCccc--ccccccceeeEEEEEEcCCCeEEEEE
Confidence 678999999999999999542 34568999999999999999999999876 99999999999999999999999999
Q ss_pred EeccCcCCCCCCCCeEEEEEEEEEccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEE
Q 004240 312 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 391 (766)
Q Consensus 312 ~~kp~~lP~~vspRDFV~LRswRr~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~ 391 (766)
++++.+ ++++++||||++|+|++.+|| |+++++||+||.+| +|||||+++++||+|+|+++ ++++|+|||++
T Consensus 118 ~~~~~~-~~~v~~RDfv~~r~~~~~~~~-~vi~~~Sv~hp~~~--~g~VR~~~~~~g~~i~p~~~----~~~~t~vt~~~ 189 (224)
T 1jss_A 118 TTAGQL-LNIISPREFVDFSYTVGYEEG-LLSCGVSVEWSETR--PEFVRGYNHPCGWFCVPLKD----SPSQSLLTGYI 189 (224)
T ss_dssp EECCBT-TTTBCCEEEEEEEEEEEETTE-EEEEEEECCCCCCC--TTSEECEECSEEEEEEEETT----EEEEEEEEEEE
T ss_pred Eccccc-CCCCCCCeEEEEEEEEEcCCe-EEEEEeeeecCCCC--CCCEEEEecccEEEEEEcCC----CCCceEEEEEE
Confidence 998753 345999999999999998776 88899999999995 49999999999999999975 34689999999
Q ss_pred eeecCCccccccCCcccchhhhHHHHHHHHHHHHHHhhc
Q 004240 392 EIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGA 430 (766)
Q Consensus 392 qvD~KGwi~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a 430 (766)
|+||+||+ |.| .+.+.+...|+.++.+||++++.
T Consensus 190 ~~Dp~G~i---P~~--lvn~~~~~~~~~~~~~Lr~~~~~ 223 (224)
T 1jss_A 190 QTDLRGMI---PQS--AVDTAMASTLANFYSDLRKGLRK 223 (224)
T ss_dssp CEECCSCC---CHH--HHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EeCCCCCc---cHH--HHHHHHHHhHHHHHHHHHHHHhh
Confidence 99999999 432 23345667788999999998864
No 5
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=2.2e-33 Score=289.21 Aligned_cols=184 Identities=18% Similarity=0.195 Sum_probs=157.7
Q ss_pred cCCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEE
Q 004240 231 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVY 310 (766)
Q Consensus 231 a~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY 310 (766)
...||++..+++||+||++..+ .++...++|++++|+++++++|..|+.. |++||+++.++++||++|++++|+|
T Consensus 48 ~~~gW~~~~~~~gi~V~~k~~~-~~~~~~~~K~~~~v~~~~~~v~~~ll~d----r~~Wd~~~~~~~vle~id~~~~I~y 122 (237)
T 2pso_A 48 KFKGWVTCSSTDNTDLAFKKVG-DGNPLKLWKASVEVEAPPSVVLNRVLRE----RHLWDEDFVQWKVVETLDRQTEIYQ 122 (237)
T ss_dssp HCCSCEEECCSSSCEEEEECCC-SSCCCCEEEEEEEESSCHHHHHHHHHHC----GGGTCTTBCCCEEEEEEETTEEEEE
T ss_pred CCCCCEEEecCCCeEEEEEEcC-CCCCcEEEEEEEEEcCChHHHHHHHHhh----hhhHHhhhceEEEEEEcCCCcEEEE
Confidence 3779999999999999999642 2456689999999999999987655432 8999999999999999999999999
Q ss_pred EEeccCcCCCCCCCCeEEEEEEEEEc-cCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEE
Q 004240 311 GTYDPKYLTRWQSKRDFVFSRQWFRG-QDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQ 389 (766)
Q Consensus 311 ~~~kp~~lP~~vspRDFV~LRswRr~-~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~ 389 (766)
+++++. +++++||||++|+|+++ ++|+|+|+++||+||++||+ |||||+++++||+|+|+++ ++|+|||
T Consensus 123 ~~~~~p---~p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~-g~VR~~~~~~g~~i~P~~~------~~t~vt~ 192 (237)
T 2pso_A 123 YVLNSM---APHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLL-GGVRAVVMDSQYLIEPCGS------GKSRLTH 192 (237)
T ss_dssp EEECCS---SSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCC-SSEECCEEEEEEEEEECST------TCEEEEE
T ss_pred EEecCC---CCcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCC-CcEEEEEeccEEEEEECCC------CCEEEEE
Confidence 999864 46999999999999974 67899999999999999999 9999999999999999965 5899999
Q ss_pred EEeeecCCccccccCCcccchhhhHHHHHHHHHHHHHHhhcCCCCC
Q 004240 390 MLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANPALK 435 (766)
Q Consensus 390 I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~~~~ 435 (766)
++++||+||+ |.|++.+....+ ..++++||+.|++.....
T Consensus 193 ~~~~Dp~G~i---P~~ln~~~~~~~---~~~l~~LR~~~~~~~~~~ 232 (237)
T 2pso_A 193 ICRIDLKGHS---PEWYSKGFGHLC---AAEVARIRNSFQPLIAEG 232 (237)
T ss_dssp EEEECCSSSC---TTTTTTHHHHHH---HHHHHHHHHTTSCC----
T ss_pred EEEeCCCCCc---hHHHHHHHHHHH---HHHHHHHHHHHHhhcCCC
Confidence 9999999999 777655554444 468999999999875533
No 6
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=100.00 E-value=3.5e-33 Score=283.96 Aligned_cols=187 Identities=18% Similarity=0.236 Sum_probs=160.5
Q ss_pred ccCCCCEEEEEe-CCEEEEEEecCCCCCcceEEEEEEeecCCHHHHH-HHHhcCCCcccccccCCCCceEEEEeecCceE
Q 004240 230 IEAHEWKCVRTL-NGVRIFEDVADSKSGRGVLVKAVGVIDASADTVF-EVVLNLERHQRYEWDMLTGDLELVDSYDGHYD 307 (766)
Q Consensus 230 ~a~sgWkl~~~k-ngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vf-e~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tD 307 (766)
.+.++|++..+. +|++||++..+ ..+.++|++++|+++|++|| +++.|.+. |++||+++.++++|+++|++++
T Consensus 39 ~~~~~W~~~~~~~~g~~vy~~~~~---~~g~~~k~~~~v~~~~~~v~~~~~~d~~~--r~~Wd~~~~~~~vle~~~~~t~ 113 (229)
T 1em2_A 39 AQEENWKFEKNNEYGDTVYTIEVP---FHGKTFILKTFLPCPAELVYQEVILQPER--MVLWNKTVTACQILQRVEDNTL 113 (229)
T ss_dssp TTGGGCEEEEECTTCCEEEEEEET---TTEEEEEEEEEESSCHHHHHHHTTTCHHH--HTTTCTTEEEEEEEEEETTTEE
T ss_pred hCCCCCEEEEecCCCCEEEEEecC---CCCceEEEEEEecCCHHHHHHHHHhCccc--hhhcccccceEEEEEecCCCeE
Confidence 346799999997 89999999664 23468999999999999999 77777765 9999999999999999999999
Q ss_pred EEEEEeccCcCCCCCCCCeEEEEEEEEEccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEE
Q 004240 308 VVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLV 387 (766)
Q Consensus 308 IvY~~~kp~~lP~~vspRDFV~LRswRr~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~V 387 (766)
|+|++.+|. +++++++||||++|+|++.+ +.|+|+.+||.||.+||++|||||+++++||+|+|+++ ++++|+|
T Consensus 114 I~~~~~~p~-~~~~~~~RDfv~~r~~~~~~-~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~----~~~~t~v 187 (229)
T 1em2_A 114 ISYDVSAGA-AGGVVSPRDFVNVRRIERRR-DRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSAS----NPRVCTF 187 (229)
T ss_dssp EEEEEECCB-TTTTBCCEEEEEEEEEEECS-SEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSS----CTTCEEE
T ss_pred EEEEEecCc-CCCCcCCCeeEEEEEEEEcC-CEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCC----CCCcEEE
Confidence 988877653 23579999999999999974 56999999999999999999999999999999999975 3468999
Q ss_pred EEEEeeecCCccccccCCcccchhhhHHHHHHHHHHHHHHhhcCC
Q 004240 388 TQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQVAGLKEYIGANP 432 (766)
Q Consensus 388 T~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~Va~LRe~~~a~~ 432 (766)
||++++||+||+ |.| .+...+...|+..+.+||++++...
T Consensus 188 t~~~~~Dp~G~i---P~~--l~n~~~~~~~~~~~~~Lr~~~~~~~ 227 (229)
T 1em2_A 188 VWILNTDLKGRL---PRY--LIHQSLAATMFEFAFHLRQRISELG 227 (229)
T ss_dssp EEEECEECCSSS---CHH--HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCC---CHH--HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 543 2334556677889999999998754
No 7
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=99.97 E-value=3e-29 Score=247.07 Aligned_cols=178 Identities=15% Similarity=0.181 Sum_probs=152.6
Q ss_pred CCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEE
Q 004240 232 AHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYG 311 (766)
Q Consensus 232 ~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~ 311 (766)
+++|++..+++||+||++..+ +.....+|++++|++||+++|++|.|.+. |++||+.+.++++|++ +++++|+|+
T Consensus 2 ~~~W~~~~~~~gv~v~~~~~~--~~~~~~~k~~~~v~~s~~~v~~~l~D~~~--~~~W~~~~~~~~vle~-~~~~~i~y~ 76 (189)
T 3qsz_A 2 QDGWSLAKDAEGIKVYVRNVE--GSPLREFRGEVRLKAAADDVVKVLRDANA--FRQWMPDVAASELLKA-TDTEQYHYL 76 (189)
T ss_dssp -CCCEEEEEETTEEEEEECCT--TCSSCEEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEEEEEE-CSSEEEEEE
T ss_pred CCCCEEEEcCCCEEEEEEeCC--CCCeEEEEEEEEEECCHHHHHHHHHhHHH--hhhHHHhcCEEEEEee-cCCceEEEE
Confidence 579999999999999999753 34557999999999999999999999987 9999999999999999 999999999
Q ss_pred EeccCcCCCCCCCCeEEEEEEEEEccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEE
Q 004240 312 TYDPKYLTRWQSKRDFVFSRQWFRGQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQML 391 (766)
Q Consensus 312 ~~kp~~lP~~vspRDFV~LRswRr~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~ 391 (766)
.++.. +++++||||++|+|+++.+|.|+|...| .||.+|+++||||+.+..+||+|+| ++ ++|+|||++
T Consensus 77 ~~~~p---~p~~~RD~v~~~~~~~~~~g~~~i~~~~-~~~~~P~~~~~VR~~~~~~~~~i~p-~~------~~t~vt~~~ 145 (189)
T 3qsz_A 77 DNSAP---WPVSNRDGVYHFTYEKAGDGAITVRVEA-VPDYLPLRKGKVRIPRAKGQWTLVP-DA------DGVDVTYQM 145 (189)
T ss_dssp EECCS---SSCCCEEEEEEEEEEECTTSCEEEEEEE-CTTSSCCCTTSEECCCEEEEEEEEE-CS------SSEEEEEEE
T ss_pred EeecC---CCcCCcceEEEEEEEECCCCeEEEEEEc-CCCccCCCCCeEEeeEeeEEEEEEE-CC------CeEEEEEEE
Confidence 88854 4699999999999999877888877766 7999999999999999999999999 54 589999999
Q ss_pred eeecCCccccccCCc-ccchhhhHHHHHHHHHHHHHHhhcC
Q 004240 392 EIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 431 (766)
Q Consensus 392 qvD~KGwi~w~p~~~-s~~~~~i~~~mL~~Va~LRe~~~a~ 431 (766)
++||+||+ |.|. +.+.+. .+...+.+||+.++.-
T Consensus 146 ~~dp~G~i---P~~lvn~~~~~---~~~~~l~~L~k~~~~~ 180 (189)
T 3qsz_A 146 HASPGGSI---PSWLANQTVVE---TPFGTLKALRSHLRQA 180 (189)
T ss_dssp EECSCSSS---CHHHHHHTTTH---HHHHHHHHHHHHHTC-
T ss_pred EeCCCCCC---CHHHHHHHHHH---HHHHHHHHHHHHhhhc
Confidence 99999999 4322 333333 4456888999888653
No 8
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=99.96 E-value=2.1e-28 Score=244.80 Aligned_cols=180 Identities=19% Similarity=0.192 Sum_probs=151.6
Q ss_pred cCCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEee-cCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEE
Q 004240 231 EAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVI-DASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVV 309 (766)
Q Consensus 231 a~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvV-daspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIv 309 (766)
+..+|+++.+++|++||++..+ +...+.+|++++| +++|++||++|+|.+. |++||+++.++++|+. ++ ++|+
T Consensus 26 ~~~~W~~~~~~~~v~v~~~~~~--~~~~~~~k~~~~i~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~-~~-~~i~ 99 (214)
T 1ln1_A 26 AGADWQLLVETSGISIYRLLDK--KTGLYEYKVFGVLEDCSPTLLADIYMDSDY--RKQWDQYVKELYEQEC-NG-ETVV 99 (214)
T ss_dssp TTTTCEEEEEETTEEEEEEEET--TTTEEEEEEEEEETTSCHHHHHHHHHCHHH--HHHHCTTEEEEEEEEE-TT-EEEE
T ss_pred CCCCcEEEEECCCeEEEEeccC--CCCcEEEEEEEEECCCCHHHHHHHHcCHHH--HHHHHHHHhhEEEecc-CC-CEEE
Confidence 4679999999999999999653 3455799999999 5999999999999866 9999999999999998 55 7899
Q ss_pred EEEeccCcCCCCCCCCeEEEEEEEEEc-cCC--eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceE
Q 004240 310 YGTYDPKYLTRWQSKRDFVFSRQWFRG-QDG--TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCL 386 (766)
Q Consensus 310 Y~~~kp~~lP~~vspRDFV~LRswRr~-~dG--sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~ 386 (766)
|++++. |+++++||||++|+|++. ++| .|+++.+||.||.+|+++|+|||++..+||+|+|+++ ++|+
T Consensus 100 ~~~~~~---p~p~~~RD~v~~~~~~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~~------~~t~ 170 (214)
T 1ln1_A 100 YWEVKY---PFPMSNRDYVYLRQRRDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDGK------KGSK 170 (214)
T ss_dssp EEEECC---CTTSCCEEEEEEEEEEEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECSS------SSEE
T ss_pred EEEEEc---CCCCCCceEEEEEEEEecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCCC------CceE
Confidence 999985 345899999999999875 365 4789999999999999999999999999999999864 5899
Q ss_pred EEEEEeeecCCccccccCCc-ccchhhhHHHHHHHHHHHHHHhhcC
Q 004240 387 VTQMLEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 431 (766)
Q Consensus 387 VT~I~qvD~KGwi~w~p~~~-s~~~~~i~~~mL~~Va~LRe~~~a~ 431 (766)
|||+.++||+||+ |.|. +.+.+.. +...+.+||+.+..-
T Consensus 171 v~~~~~~Dp~G~i---P~~l~n~~~~~~---~~~~l~~l~k~~~~y 210 (214)
T 1ln1_A 171 VFMYYFDNPGGQI---PSWLINWAAKNG---VPNFLKDMARACQNY 210 (214)
T ss_dssp EEEEEEECCSSCC---CHHHHHHHHHTH---HHHHHHHHHHHHHTC
T ss_pred EEEEEEECCCCcc---cHHHHHHHHHHH---hHHHHHHHHHHHHhc
Confidence 9999999999999 4432 3333333 345778888877643
No 9
>2e3n_A Lipid-transfer protein CERT; ceramide transfer, lipid transport; HET: 6CM; 1.40A {Homo sapiens} PDB: 2e3m_A* 2e3o_A* 2e3p_A* 2e3q_A* 2e3r_A* 2e3s_A 2z9y_A* 3h3q_A* 3h3r_A* 3h3s_A* 3h3t_A* 2z9z_A*
Probab=99.96 E-value=1.3e-28 Score=254.44 Aligned_cols=193 Identities=15% Similarity=0.249 Sum_probs=152.2
Q ss_pred ccccCCCCEEEEEeCCEEEEEEecCCCCCcceEEEEEEeec-CCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCce
Q 004240 228 DAIEAHEWKCVRTLNGVRIFEDVADSKSGRGVLVKAVGVID-ASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY 306 (766)
Q Consensus 228 ~~~a~sgWkl~~~kngVrVy~~~~~~~~~~~~~~Ka~gvVd-aspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~t 306 (766)
.+.+..+|+++.+++|++||++..+..+.....+|+.+++. ++|++||++|+|.+. |++||+++.++++||++|+++
T Consensus 42 ~~~~~~~W~~~~~~~gv~vy~~~~~~~g~~~~~~K~~~~~~~~~~~~v~~~l~d~~~--r~~Wd~~~~~~~vle~i~~~~ 119 (255)
T 2e3n_A 42 DVGGDANWQLVVEEGEMKVYRREVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDV--RNDWETTIENFHVVETLADNA 119 (255)
T ss_dssp CCTTCTTEEEEEEETTEEEEEECCEETTEECCCEEEEEEEETCCHHHHHHHHHCGGG--HHHHCCSEEEEEEEEEEETTE
T ss_pred hcCCCCCcEEEEeCCCEEEEEEEcCCCCceeeeEEEEEEEcCCCHHHHHHHHhCcch--HhhhhhhcceeEEEEEcCCCC
Confidence 33456799999999999999996432222123589988875 899999999999876 999999999999999999999
Q ss_pred EEEEEEeccCcCCCCCCCCeEEEEEEEEEc----cC--CeEEEEEeeccCCCCCCCCCeEeEE---EcceeEEEEecCCC
Q 004240 307 DVVYGTYDPKYLTRWQSKRDFVFSRQWFRG----QD--GTYTILQFPAVHKKRPPKSGYRRTK---INPSTWEIRSLNLP 377 (766)
Q Consensus 307 DIvY~~~kp~~lP~~vspRDFV~LRswRr~----~d--GsYVIa~~SV~Hp~~Pp~~GyVRAe---i~~sGylI~P~~~~ 377 (766)
+|+|++++.. +++++||||++|+|++. ++ +.|+++.+|+.||.+|+++|||||+ ++++||+|+|..+.
T Consensus 120 ~i~y~~~~~p---~p~s~RDfV~~r~~~~~~~~~~~g~~~~~i~~~Sv~~~~~P~~~g~VR~~~~~~~~~~~~i~~~~g~ 196 (255)
T 2e3n_A 120 IIIYQTHKRV---WPASQRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGN 196 (255)
T ss_dssp EEEEEEECCC---TTSCCEEEEEEEEEEEECCSSTTSCCEEEEEEEECCCTTSCCCSSSEECEEEEEEEEEEEEC---CC
T ss_pred EEEEEEeecC---CCcCCceeEEEEEEEeccccccCCCCEEEEEEeccCCCCCCCCCCCEEEEEEeeeeeeeEeccCCCC
Confidence 9999999854 46899999999999986 22 4899999999999999999999999 57899999997320
Q ss_pred C--CCCCCceEEEEEEeeecCCccccccCCc-ccchhhhHHHHHHHHHHHHHHhhcC
Q 004240 378 M--GSNGAKCLVTQMLEIHSSGWCRWKKNSS-TKFEKTTHFALLSQVAGLKEYIGAN 431 (766)
Q Consensus 378 ~--~~~~~~c~VT~I~qvD~KGwi~w~p~~~-s~~~~~i~~~mL~~Va~LRe~~~a~ 431 (766)
- ..++++|+|||++++||+||+ |.|. +.+.+. .+...+.+||+++..+
T Consensus 197 ~~l~~~~~~t~vt~~~~~Dp~G~i---P~~lvn~~~~~---~~~~~l~~L~k~v~~~ 247 (255)
T 2e3n_A 197 QEISRDNILCKITYVANVNPGGWA---PASVLRAVAKR---EYPKFLKRFTSYVQEK 247 (255)
T ss_dssp CCCCGGGEEEEEEEEEEEECSSCC---CHHHHHHHHHH---HHHHHHHHHHHHHHHH
T ss_pred cccccCCCcEEEEEEEEeCCCCcc---CHHHHHHHHhc---cccHHHHHHHHHHHHh
Confidence 0 002358999999999999999 4432 333333 3445778888877653
No 10
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.32 E-value=1.6e-12 Score=120.44 Aligned_cols=108 Identities=15% Similarity=0.189 Sum_probs=75.1
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcc---eeeeec-CceeEeeccceeeeCceEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPI---RRGVIG-PTLMVEELGRRRFNHGDVYV 119 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pi---r~~~i~-~~~rv~d~g~~~~~~~~~yv 119 (766)
..+.++||||.-|. . ...-++|||||+++.|.|||.++...+...|+ ..|+|| .+|.|+. ..+. +.+.-|+
T Consensus 10 ~~~~k~G~L~K~g~--~-~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~v~~-~~~~-~~~k~~~ 84 (124)
T 2w2x_D 10 DEHKQQGELYMWDS--I-DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYNVVK-APQG-KNQKSFV 84 (124)
T ss_dssp ---CCEEEEEEEET--T-TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEEEEE-CTTC-BTTBSEE
T ss_pred hhcceeEEEEEECC--C-CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCEEEE-ccCC-cCCCCEE
Confidence 56779999999773 2 34459999999999999999764321122343 456665 4455543 3332 2345589
Q ss_pred EEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 120 ~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
|.|++...+.+.+.|+|.|.||+..||+||+.|+..+
T Consensus 85 F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~~ 121 (124)
T 2w2x_D 85 FILEPKQQGDPPVEFATDKVEELFEWFQSIREITWKI 121 (124)
T ss_dssp EEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred EEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 9999988777889999999999999999999998743
No 11
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=1.2e-09 Score=99.62 Aligned_cols=103 Identities=12% Similarity=0.263 Sum_probs=72.4
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEec--ceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRG--KYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~--~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~ 121 (766)
+.+.++|||+.-|. ....| ++|||||++ ..|.|||.+.... ..|.....+..+. |+.... .-+.|.
T Consensus 6 ~~~~~~G~L~K~~~--~~~~W-k~R~fvL~~~~~~L~Yyk~~~~~~--~~~~g~I~L~~~~-v~~~~~------~~~~F~ 73 (120)
T 2d9x_A 6 SGENVYGYLMKYTN--LVTGW-QYRFFVLNNEAGLLEYFVNEQSRN--QKPRGTLQLAGAV-ISPSDE------DSHTFT 73 (120)
T ss_dssp SCCCCEEEEEEEEE--TTTEE-EEEEEEECTTTCEEEEESSGGGSS--SCCSEEEECTTCC-EECCSS------SSSCEE
T ss_pred CCCcEEEEEEecCC--CCCCc-eEEEEEEECCCCEEEEEecCcccC--CCccceEEcceEE-EEecCC------CCCEEE
Confidence 45679999999873 23344 999999994 7999999766432 3455555555543 443221 116778
Q ss_pred EeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (766)
Q Consensus 122 ~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~~~~~ 160 (766)
|.... .+.+.|.|.|.+|+..|+++|+.|+.......
T Consensus 74 i~~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~~ 110 (120)
T 2d9x_A 74 VNAAS--GEQYKLRATDAKERQHWVSRLQICTQHHTEAI 110 (120)
T ss_dssp ECCSS--SCCEEECCSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEcCC--CCEEEEECCCHHHHHHHHHHHHHHHHHhhhhh
Confidence 87542 36789999999999999999999998544433
No 12
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.98 E-value=2.1e-09 Score=101.01 Aligned_cols=100 Identities=15% Similarity=0.282 Sum_probs=73.5
Q ss_pred CCCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEE
Q 004240 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (766)
Q Consensus 42 ~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~ 121 (766)
.++.+.++|||+.-| ....+ ++|||||+++.|.|||.+.. ..|+-+..+.++..++.. ..+.=|.|.
T Consensus 4 ~~~~v~k~GwL~K~g---~~k~W-krRWfVLk~~~L~yyk~~~~----~~p~G~I~L~~~~v~~~~-----~~~~~~~F~ 70 (130)
T 1v88_A 4 GSSGIVMADWLKIRG---TLKSW-TKLWCVLKPGVLLIYKTQKN----GQWVGTVLLNACEIIERP-----SKKDGFCFK 70 (130)
T ss_dssp SSSSCCEEEEEEECC---SSSSC-EEEEEEEETTEEEEESCSSS----CCCCEEEECSSCEECCCC-----TTTSSCEEE
T ss_pred CCCceEEEeEEEEeC---CCCCc-eEEEEEEECCEEEEECCCCC----CCceEEEEcCCCEEEECC-----CCCCCeEEE
Confidence 346677999999844 33455 99999999999999997643 456666666665543322 122237899
Q ss_pred EeecCCcC---------------------cceeeeccCHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLDES---------------------KKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 122 ~yn~~~~~---------------------~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|++...++ ....|.|.|.+|...||+||+.|+.
T Consensus 71 i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~ 124 (130)
T 1v88_A 71 LFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALK 124 (130)
T ss_dssp EECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 98765432 3367999999999999999999976
No 13
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=98.97 E-value=4.1e-09 Score=97.97 Aligned_cols=103 Identities=9% Similarity=0.172 Sum_probs=74.3
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceee-------eCceEE
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRF-------NHGDVY 118 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~-------~~~~~y 118 (766)
+..+|||++-|. +..+| ++|||||.+++|.|||.+.... +..|.-++.+ .+|.|+..-.+-. +..-.|
T Consensus 6 ~~k~G~L~Kk~~--~~k~W-~~rwfVL~~~~L~yyK~~~~~~-d~~P~gsI~L-~~c~v~~~~~~~~~~~~~~~~~~~~F 80 (120)
T 4a6h_A 6 EIKSGFLERRSK--FLKSY-SKGYYVLTPNFLHEFKTADRKK-DLVPVMSLAL-SECTVTEHSRKNSTSSPNSTGSDAKF 80 (120)
T ss_dssp CSEEEEEEEEET--TTTEE-EEEEEEECSSEEEEESSCCTTT-CCSCSEEEEG-GGEEEEEECCCCC---------CCEE
T ss_pred ccEEEEEEEcCC--CCCCC-ccEEEEEeCCEEEEEcCCCcCc-CCCceEEEEC-CCCEEEEcccccccccccccCCCcEE
Confidence 679999999654 66677 9999999999999999876443 4678888888 4677766444321 122234
Q ss_pred EEEEeecC--CcCcceeeeccCHHHHHHHHHHHHHHH
Q 004240 119 VMRLYNRL--DESKKGEIACATAGEARKWMEAFDQAK 153 (766)
Q Consensus 119 v~~~yn~~--~~~~~~~~aa~~~eea~~W~~~~~~~~ 153 (766)
+|..-+.. ..++...|.|.|.+|+..|+++|+.|+
T Consensus 81 ~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 81 VLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 44432210 124689999999999999999999884
No 14
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=7.3e-09 Score=93.74 Aligned_cols=101 Identities=10% Similarity=0.184 Sum_probs=71.7
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+.++|||+.-|.+. ...+ ++|||||.+..|.|||.... ..|.....+..++ |...+.....++ =|.|.|.
T Consensus 20 ~~~~~~G~L~K~~~~~-~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~-v~~~~~~~~~~~-~~~F~i~ 91 (122)
T 2yry_A 20 APVTKAGWLFKQASSG-VKQW-NKRWFVLVDRCLFYYKDEKE----ESILGSIPLLSFR-VAAVQPSDNISR-KHTFKAE 91 (122)
T ss_dssp CCEEEEEEEEEECCSS-SCCE-EEEEEEEETTEEEEESSTTC----CSCCEEEESTTCC-CEECCTTCSCSS-SSEEEEE
T ss_pred CCccEEEEEEEECCCC-CCCc-EEEEEEEeCCEEEEECCCCC----CCcccEEEcCCCE-EEEcCccccCCc-ccEEEEe
Confidence 4567999999987543 2445 99999999999999996643 3465566565554 544332222222 2567775
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.. ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 92 ~~--~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 92 HA--GVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp CS--SSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cC--CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 32 356789999999999999999999975
No 15
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=98.96 E-value=1.6e-09 Score=94.31 Aligned_cols=92 Identities=10% Similarity=0.164 Sum_probs=67.9
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEeec
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNR 125 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn~ 125 (766)
+..+|||+.-|. +-.+| ++|||||++..|.||+.+.... ..|+-...+..+..+.+.... +.|.|..
T Consensus 1 V~k~G~L~K~g~--~~k~W-kkR~FvL~~~~L~Yy~~~~~~~--~~~~~~i~l~~~~~~~~~~~~-------~~F~i~~- 67 (94)
T 2rsg_A 1 VERCGVLSKWTN--YIHGW-QDRWVVLKNNALSYYKSEDETE--YGCRGSICLSKAVITPHDFDE-------CRFDISV- 67 (94)
T ss_dssp CCEEEEEEEESS--STTCE-EEEEEEEETTEEEEESSTTGGG--TCCSEEEETTTCEEEECSSCS-------SEEEEEE-
T ss_pred CCEEEEEEEeCC--CCCCc-eEEEEEEECCEEEEEEeccccc--ccceeeEecceeeeecCcccc-------eeEEEEe-
Confidence 357999999763 34556 9999999999999999765433 456666666666555554332 2355554
Q ss_pred CCcCcceeeeccCHHHHHHHHHHHHHH
Q 004240 126 LDESKKGEIACATAGEARKWMEAFDQA 152 (766)
Q Consensus 126 ~~~~~~~~~aa~~~eea~~W~~~~~~~ 152 (766)
..+.+.|.|.|.+|+..|++||++|
T Consensus 68 --~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 68 --NDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp --TTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred --CCeEEEEECCCHHHHHHHHHHHHhh
Confidence 3567899999999999999999988
No 16
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.95 E-value=5.5e-09 Score=95.36 Aligned_cols=99 Identities=9% Similarity=0.169 Sum_probs=75.1
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecc--eeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK--YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVM 120 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~--~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~ 120 (766)
...+.++|||+.-|...+-..| ++|||||++. .|.|||.... ..|.....+..++.|.+..-+ -+.|
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~W-kkRwfvL~~~~~~L~Yy~~~~~----~~~~g~I~L~~~~~~~~~~~~------~~~F 73 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGW-KSRWFFYDERKCQLYYSRTAQD----ANPLDSIDLSSAVFDCKADAE------EGIF 73 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCC-EEEEEEEETTTTEEEEESSTTC----CSCSEEEEGGGCEEEECTTGG------GCEE
T ss_pred CCCCcEEEEEEecCCCCCCCCc-eeEEEEEECCccEEEEECCCCC----cccccEEECCCCEEEecCCCC------CCEE
Confidence 3556799999998764344566 8999999999 9999996542 356667777777777642111 1467
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
.|... .+.+.|.|.|.+|+..|+++|+.|+.+
T Consensus 74 ~i~~~---~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (119)
T 2dhk_A 74 EIKTP---SRVITLKAATKQAMLYWLQQLQMKRWE 105 (119)
T ss_dssp EEECS---SCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEeC---CcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 77654 677899999999999999999999873
No 17
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.95 E-value=4.2e-09 Score=92.57 Aligned_cols=102 Identities=14% Similarity=0.206 Sum_probs=72.5
Q ss_pred cceeeeEEEEEcccc-c-ccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 45 YFEYFGWVYHMGTNS-I-GHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 45 ~~~~egw~~~~~~~~-~-g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
.+.++|||+.-|... + +..+ ++|||||.+..|.|||.... ..|.....+.++..+.....+ ...+.-|.|.|
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~v~~~~~~~-~~~~~~~~F~i 75 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEW-QKRWCVVSRGLFYYYANEKS----KQPKGTFLIKGYSVRMAPHLR-RDSKKESCFEL 75 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEECGGGC-SSGGGGGEEEE
T ss_pred CccEEEEEEEcCCCCCccccCc-eeeEEEEeCCEEEEecCCCC----CCCCEEEEecceEEEeCCccc-cccCCcceEEE
Confidence 467999999988653 3 3555 89999999999999996542 456666666666533321111 11122357777
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..+ ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 76 ~~~--~~r~~~l~a~s~~e~~~Wi~ai~~~i~ 105 (108)
T 1u5d_A 76 TSQ--DRRTYEFTATSPAEARDWVDQISFLLK 105 (108)
T ss_dssp ECS--SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EcC--CCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 653 236788999999999999999999987
No 18
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.95 E-value=7.6e-09 Score=94.38 Aligned_cols=101 Identities=13% Similarity=0.204 Sum_probs=73.2
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+.++|||+.-|.+. ...| ++|||||++..|.|||.+.. ..|.....+. +|.|+....+...++ -|+|.|.
T Consensus 19 ~~~~~~G~L~K~~~~~-~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~-~~~v~~~~~~~~~~~-~~~F~i~ 90 (128)
T 2dkp_A 19 APVVRRGWLYKQDSTG-MKLW-KKRWFVLSDLCLFYYRDEKE----EGILGSILLP-SFQIALLTSEDHINR-KYAFKAA 90 (128)
T ss_dssp SCCCEEEEEEEECCSS-SCCE-EEEEEEEETTEEEEESSTTC----CSEEEEECGG-GSEEEECCGGGCCSS-CSEEEEE
T ss_pred CCcEEEEEEEEeCCCC-CCCc-eeEEEEEeCCEEEEECCCCC----cccceEEEcC-ceEEEEcCCcccCCC-CeEEEEE
Confidence 4566999999987643 3344 99999999999999996542 3455555553 556665443332222 2678887
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.+. .+.+.|.|.|.+|+..|+++|++|+.
T Consensus 91 ~~~--~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 91 HPN--MRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp CSS--SCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred cCC--CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 653 36688999999999999999999976
No 19
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=4.9e-09 Score=94.88 Aligned_cols=96 Identities=10% Similarity=0.132 Sum_probs=69.0
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+.++|||+.-|.. +...+ ++|||||++..|.|||.+.. .|... ++.-+|.|+.. .++. |.|.|.
T Consensus 8 ~~~~~~G~L~K~~~~-~~k~W-kkR~fvL~~~~L~yyk~~~~-----~~~~~-i~l~~~~v~~~-----~~~~-~~F~I~ 73 (114)
T 2da0_A 8 YGSEKKGYLLKKSDG-IRKVW-QRRKCSVKNGILTISHATSN-----RQPAK-LNLLTCQVKPN-----AEDK-KSFDLI 73 (114)
T ss_dssp CCSCEEEEEEEECSS-SCCCE-EEEEEEEETTEEEECCSSCC-----SCCEE-EETTTSEEEEC-----SSSS-SCEEEE
T ss_pred CCccEEEEEEEeCCC-CCCCc-eeEEEEEeCCEEEEEcCCCC-----CCCCE-EEeeeeEEEEC-----CCCC-CEEEEE
Confidence 356699999998853 43555 99999999999999997432 23333 33344445411 1111 467777
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
. ..+.+.|.|.|.+|+..|+++|+.|+.++
T Consensus 74 ~---~~r~~~l~a~s~~e~~~Wi~al~~~~~~~ 103 (114)
T 2da0_A 74 S---HNRTYHFQAEDEQDYVAWISVLTNSKEEA 103 (114)
T ss_dssp E---TTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred c---CCcEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 4 46788999999999999999999999854
No 20
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=6.4e-09 Score=92.96 Aligned_cols=101 Identities=12% Similarity=0.162 Sum_probs=74.4
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
.+.+.++|||+.-|. .... -++|||||.+..|.|||.+. ...|.....+...+.|+...-.. + .-+.|.|
T Consensus 5 ~~~~~~~G~L~K~~~--~~~~-Wk~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~v~~~~~~~--~-~~~~F~i 74 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGH--RRKN-WTERWFVLKPNIISYYVSED----LKDKKGDILLDENCCVESLPDKD--G-KKCLFLV 74 (115)
T ss_dssp CCSCSEEEEEEEECT--TSSC-EEEEEEEECSSCEEEESSTT----CSSEEEEECCCTTCEEEEECCCT--T-CCSEEEE
T ss_pred CCCceEEEEEEecCC--CCCC-cEEeEEEEECCEEEEeCCCC----CcccCcEEEecCcEEEEECCCCC--C-CeeEEEE
Confidence 356679999999765 2234 49999999999999999543 24577777777777776532111 1 1256666
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
... .+.+.|.|.|.+|+..|+++|+.|+.+.
T Consensus 75 ~~~---~r~~~l~a~s~~e~~~Wi~ai~~~~~~~ 105 (115)
T 2dn6_A 75 KCF---DKTFEISASDKKKKQEWIQAIHSTIHLL 105 (115)
T ss_dssp ECS---SCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred EeC---CCEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 443 5678999999999999999999999843
No 21
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=98.94 E-value=3e-09 Score=97.23 Aligned_cols=104 Identities=13% Similarity=0.207 Sum_probs=75.0
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEec-ceeeeeccCCCCCC-CCCcceeeeecCceeE-eeccceeeeCceEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRG-KYVEMYKRDPHENP-GIKPIRRGVIGPTLMV-EELGRRRFNHGDVYVM 120 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~-~~~~~yk~~p~~~~-~~~pir~~~i~~~~rv-~d~g~~~~~~~~~yv~ 120 (766)
+.+.++|||+.-|.. -..| ++|||||++ ..|.|||.++...| +.+||....+-.+.-+ .+.++ =|.|
T Consensus 6 ~~~~~~G~L~K~g~~--~k~W-kkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~~~~~~~~~-------~~~F 75 (125)
T 1unq_A 6 VAIVKEGWLHKRGEY--IKTW-RPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR-------PNTF 75 (125)
T ss_dssp GCEEEEEEEEEECSS--SCCE-EEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCEEEEECSSS-------TTEE
T ss_pred CCeeEEeeEEeccCC--ccCc-cCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeeeecccccCC-------CCEE
Confidence 456799999997652 2344 999999996 59999998876544 4578887766543222 22222 1567
Q ss_pred EEeecC-CcCcceeeeccCHHHHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRL-DESKKGEIACATAGEARKWMEAFDQAKQQAE 157 (766)
Q Consensus 121 ~~yn~~-~~~~~~~~aa~~~eea~~W~~~~~~~~~~~~ 157 (766)
.|.... ...+.+.|.|.|.+|+..|+++|+.|+.+..
T Consensus 76 ~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~ 113 (125)
T 1unq_A 76 IIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLK 113 (125)
T ss_dssp EEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhcc
Confidence 777543 3456678999999999999999999998443
No 22
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.92 E-value=8.1e-09 Score=92.97 Aligned_cols=94 Identities=11% Similarity=0.168 Sum_probs=72.7
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
+.+.++|||+.-|... ...-++|||||.+..|.|||.+.. ..|.....+...+.|+..+ . +.|.|.
T Consensus 6 ~~~~~~G~L~K~~~~~--~~~WkkR~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~~v~~~~-----~---~~F~i~ 71 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQG--KRMFQKRWVKFDGLSISYYNNEKE----MYSKGIIPLSAISTVRVQG-----D---NKFEVV 71 (115)
T ss_dssp SCCCEEEEEEECCSSS--SSCCEEEEEEECSSEEEEEESSCC----SSCCCEEETTTEEEEEEET-----T---TEEEEE
T ss_pred CCccEEEEEEEcCCCC--CCCCceEEEEEECCEEEEEcCCCC----cccCCEEECCcceEEEeCC-----C---CEEEEE
Confidence 4567999999866422 233499999999999999997543 3566677777777888655 2 456665
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
...+.+.|.|.|.+|+..|+++|++|+.
T Consensus 72 ---~~~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 72 ---TTQRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp ---ESSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---eCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999986
No 23
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.92 E-value=1.4e-08 Score=90.87 Aligned_cols=103 Identities=13% Similarity=0.258 Sum_probs=73.1
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
.+.+.++|||+.-|. ....+ ++|||||.+..|.|||.... ..|.....+.++. |.+....... ..-|+|.|
T Consensus 5 ~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~-v~~~~~~~~~-~~~~~f~i 75 (118)
T 1v89_A 5 SSGPIKMGWLKKQRS--IVKNW-QQRYFVLRAQQLYYYKDEED----TKPQGCMYLPGCT-IKEIATNPEE-AGKFVFEI 75 (118)
T ss_dssp SSCEEEEEEEEEECS--SSSCE-EEEEEEEETTEEEEESSSSC----CSCSEEECSTTEE-EEEECCCSSC-CCCCEEEE
T ss_pred CCCCcEEEEEEecCC--CCCCc-cEEEEEEECCEEEEEeCCCC----CCceEEEECCCCE-EEEcCcCccc-CCcceEEE
Confidence 356789999999764 33444 89999999999999997643 3455555555443 4332211111 12367788
Q ss_pred eecC-----CcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRL-----DESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~-----~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.... ...+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 76 ~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 76 IPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp EESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 7643 2567889999999999999999999987
No 24
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.92 E-value=7.3e-09 Score=97.78 Aligned_cols=109 Identities=11% Similarity=0.154 Sum_probs=76.8
Q ss_pred ccCCCCCcceeeeEEEEEcccc--cccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCc
Q 004240 38 VGDKEKGYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHG 115 (766)
Q Consensus 38 ~~~~~~~~~~~egw~~~~~~~~--~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~ 115 (766)
+++..-..+.++|||+.-|... ++..| ++|||||++..|.|||.... ..|.....+.+++.+...+... .++
T Consensus 9 ~~~~~~~~~~~~G~L~K~g~~~~~~~k~W-kkR~fvL~~~~L~yyk~~~~----~~~~g~i~L~~~~v~~~~~~~~-~~~ 82 (148)
T 1u5f_A 9 IPAQDLPFVIKAGYLEKRRKDHSFLGFEW-QKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLRK-DGK 82 (148)
T ss_dssp CCGGGCSSEEEEEEEEEECCCSSCSSCSE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEECTTSCS-STT
T ss_pred CChhhCCCccEEEEEEEeCCCCCCcCCCc-eeEEEEEECCEEEEEcCCCC----cccceEEEcCCcEEEECCCccc-CCC
Confidence 3334446778999999988643 55566 99999999999999986542 4566667776665443111111 112
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.-|.|.|.... .+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 83 ~~~~F~I~~~~--~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 83 KDCCFEICAPD--KRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp GGGEEEEECTT--SCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CccEEEEECCC--CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 22677777632 46789999999999999999999977
No 25
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.91 E-value=5.7e-09 Score=95.28 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=74.9
Q ss_pred CCCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEE
Q 004240 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (766)
Q Consensus 42 ~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~ 121 (766)
....+.++|||+.-|. ....| ++|||||.+..|.|||.+.. ..|.....+..+..|+... ..+.-|.|.
T Consensus 14 ~~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~~v~~~~----~~~~~~~F~ 82 (126)
T 1fao_A 14 APSLGTKEGYLTKQGG--LVKTW-KTRWFTLHRNELKYFKDQMS----PEPIRILDLTECSAVQFDY----SQERVNCFC 82 (126)
T ss_dssp -CCTTCEEEEEEEECS--SSCCE-EEEEEEEETTEEEEESSTTC----SSCSEEEEGGGCCEEEEEC----SSSSSSEEE
T ss_pred CCCCccEEEEEEEcCC--CCCCc-ccEEEEEECCEEEEeCCCCC----CCceeEEEccceEEEEecc----cCCCCCEEE
Confidence 3456779999999773 33344 99999999999999995442 4577777777776666421 112235677
Q ss_pred EeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (766)
Q Consensus 122 ~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~~~~~ 160 (766)
|.. ..+.+.|.|.|.+|+..|+++|+.|+.+++.++
T Consensus 83 i~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~~~ 118 (126)
T 1fao_A 83 LVF---PFRTFYLCAKTGVEADEWIKILRWKLSQIRKQL 118 (126)
T ss_dssp EEE---TTEEEEEECSSHHHHHHHHHHHHHHHHTC----
T ss_pred EEe---CCcEEEEECCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 764 367889999999999999999999999654444
No 26
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.88 E-value=2e-08 Score=89.50 Aligned_cols=101 Identities=11% Similarity=0.180 Sum_probs=72.4
Q ss_pred CCCCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEE
Q 004240 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVM 120 (766)
Q Consensus 41 ~~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~ 120 (766)
..++.+.++|||++-|.. ...+ ++|||||++..|.|||.+.. ..|.....+.+++.+...- +..+ =|+|
T Consensus 3 ~~~~~~~~~G~L~K~~~~--~~~W-k~RwfvL~~~~L~yyk~~~~----~~~~~~i~L~~~~~~~~~~-~~~~---~~~F 71 (109)
T 1wgq_A 3 SGSSGSTMSGYLYRSKGS--KKPW-KHLWFVIKNKVLYTYAASED----VAALESQPLLGFTVTLVKD-ENSE---SKVF 71 (109)
T ss_dssp SCCCSCSCEEEEEEESST--TSCC-EEEEEEEETTEEEEESCTTC----SSCSEEEECSSEEEEECCC-SSCS---SSEE
T ss_pred CCCCCCeEEEEEEeCCCC--CCCc-eeEEEEEeCCEEEEECCCCc----CccCceEECCCCEEEECCC-CCCC---CcEE
Confidence 344667799999986532 2344 99999999999999996542 4566777777766665321 1111 1466
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.|... ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 72 ~i~~~--~~~~~~~~a~s~~e~~~Wi~al~~a~~ 103 (109)
T 1wgq_A 72 QLLHK--GMVFYVFKADDAHSTQRWIDAFQEGTV 103 (109)
T ss_dssp EEEET--TEEEEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEeC--CCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 77642 234589999999999999999999976
No 27
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.87 E-value=9.1e-09 Score=93.31 Aligned_cols=102 Identities=13% Similarity=0.209 Sum_probs=74.4
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
...+.++|||+.-|. ....+ ++|||||.+..|.|||.+.. ..|.....+..+..|+...-+... ..-|.|.|
T Consensus 11 ~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~l~~~~~v~~~~~~~~~-~~~~~F~i 82 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGA--VMKNW-KRRYFQLDENTIGYFKSELE----KEPLRVIPLKEVHKVQECKQSDIM-MRDNLFEI 82 (125)
T ss_dssp -CCCSEEEEEEEECT--TTCCE-EEEEEEECSSEEEEESSTTC----SSCSEEEEGGGCCEEEECTTHHHH-TCSSEEEE
T ss_pred CCCccEEEEEEEeCC--CCCCc-ceEEEEEeCCEEEEEcCCCC----CcceeEEEcccceEEeeccccccC-CcCCEEEE
Confidence 356679999999764 23344 99999999999999996542 457777777777777653211111 11246666
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
.. ..+.+.|.|.|.+|+..|+++|+.|+..
T Consensus 83 ~~---~~r~~~l~a~s~~e~~~W~~al~~~i~~ 112 (125)
T 1eaz_A 83 VT---TSRTFYVQADSPEEMHSWIKAVSGAIVA 112 (125)
T ss_dssp EC---SSCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred Ee---CCcEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 63 3678999999999999999999999983
No 28
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.87 E-value=1.4e-08 Score=91.90 Aligned_cols=100 Identities=15% Similarity=0.289 Sum_probs=71.0
Q ss_pred cceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEee
Q 004240 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (766)
Q Consensus 45 ~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn 124 (766)
.+.++|||+.-|.+.+ .. -++|||||.+..|.|||.+... .|.....+ .+|.|+........+ .-|.|.|..
T Consensus 10 ~~~~~G~L~K~~~~~~-~~-WkkR~fvL~~~~L~yy~~~~~~----~~~g~i~l-~~~~v~~~~~~~~~~-~~~~f~i~~ 81 (123)
T 1upq_A 10 PVHIRGWLHKQDSSGL-RL-WKRRWFVLSGHCLFYYKDSREE----SVLGSVLL-PSYNIRPDGPGAPRG-RRFTFTAEH 81 (123)
T ss_dssp CEEEEEEEEEECSSSS-CC-EEEEEEEEETTEEEEESSTTCC----SCCEEEEG-GGCEEEECCSSCTTS-SSSEEEEEC
T ss_pred CceEEEEEEeeCCCCC-CC-ceeEEEEEeCCEEEEECCCCCc----ccceEEEC-CCCEEEECCCCccCC-CcEEEEEEC
Confidence 4669999999875443 33 4999999999999999965533 34444443 345666554322222 235677764
Q ss_pred cCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 125 RLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 125 ~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
. ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 82 ~--~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 82 P--GMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp T--TSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred C--CCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 3 246788999999999999999999987
No 29
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=98.86 E-value=6.9e-09 Score=95.56 Aligned_cols=108 Identities=19% Similarity=0.256 Sum_probs=70.7
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCce--eEeeccceeeeCceEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTL--MVEELGRRRFNHGDVYVMR 121 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~--rv~d~g~~~~~~~~~yv~~ 121 (766)
+.+.++|||+.-+... +..--++|||||++..|.|||...... ...|.....+..+. .|+...++...+. |.|.
T Consensus 3 ~~v~~~G~L~K~~~~~-~~~~WkrRwfvL~~~~L~yyk~~~d~~-~~~p~g~I~L~~~~~~~v~~~~~~~~~~~--~~F~ 78 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVS-GFGAWHRRWCVLSGNCISYWTYPDDEK-RKNPIGRINLANCTSRQIEPANREFCARR--NTFE 78 (134)
T ss_dssp CCCCEEEEEEEEEEET-TEEEEEEEEEEEETTEEEEESSHHHHT-TSCCSEEEEGGGBCSSSCEECCTTTCCCT--TEEE
T ss_pred CCceEEeeEEEEcCCC-CCCCcEEEEEEEECCEEEEECCCCccc-ccCceEEEEhhhCccccccccchhhccCC--CEEE
Confidence 4567999999872212 223449999999999999999543322 34565555555543 2554433222222 4566
Q ss_pred Eeec--CCcC---------------cceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 122 LYNR--LDES---------------KKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 122 ~yn~--~~~~---------------~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
|+.. ...+ ..+.|.|.|.+|+..|+++|+.|+..
T Consensus 79 i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i~~ 129 (134)
T 2y7b_A 79 LITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVLVD 129 (134)
T ss_dssp EEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 6652 2111 25899999999999999999999883
No 30
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.85 E-value=9.3e-09 Score=96.72 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=72.1
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeec----cCCCCCCCCCcceeeeecCceeEeec--cceeeeCceE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYK----RDPHENPGIKPIRRGVIGPTLMVEEL--GRRRFNHGDV 117 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk----~~p~~~~~~~pir~~~i~~~~rv~d~--g~~~~~~~~~ 117 (766)
....++||||.-|.+.+ ..| ++|||||.++.|.||| ++.. ..|+-.+..++ +.|+.- --+...++
T Consensus 6 ~n~~~~G~L~KqG~~~~-K~W-KrRwFVL~~~~LyYfk~~~~~~~~----~~p~G~I~L~g-~tV~~~~~~~~~~~~k-- 76 (126)
T 1wi1_A 6 SGMKHSGYLWAIGKNVW-KRW-KKRFFVLVQVSQYTFAMCSYREKK----AEPQELLQLDG-YTVDYTDPQPGLEGGR-- 76 (126)
T ss_dssp CCEEEEEEEEEECSSSC-CSC-EEEEEEEEEEETTEEEEEECCSSS----SCCSEEEECSS-CEEEECCCCSSCCSCS--
T ss_pred CCCceeEEEEEeCCCcc-ccc-ceEEEEEeCCEEEEEEcccccccC----CCCceEEECCC-cEEEEecCCcccccCc--
Confidence 34579999999987644 577 8899999999999999 6653 34554444444 566521 11223333
Q ss_pred EEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 118 yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
|.|.+.. +.+...|+|.|.||-..||.||..|+-|
T Consensus 77 ~~F~~v~---~~~ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 77 AFFNAVK---EGDTVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp SEEEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred eEEEEec---CCceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 5666653 3456999999999999999999999763
No 31
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.85 E-value=2.1e-08 Score=91.03 Aligned_cols=99 Identities=13% Similarity=0.248 Sum_probs=72.1
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+.++|||+.-|.. ...+ ++|||||.+..|.|||.... ..|.....+.++ .|.... ..+.-+.|.|.
T Consensus 3 ~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~-~v~~~~----~~~~~~~f~i~ 70 (127)
T 1fgy_A 3 FNPDREGWLLKLGGR--VKTW-KRRWFILTDNCLYYFEYTTD----KEPRGIIPLENL-SIREVL----DPRKPNCFELY 70 (127)
T ss_dssp SSCSEEEEEEEECSS--SCCE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTC-EEEEEC----CSSCSSEEEEE
T ss_pred CCCceEeEEEEECCC--CCCe-EEEEEEEECCEEEEeCCCCC----CCcceEEECCce-EEEEcc----CCCCCceEEEe
Confidence 346799999998754 2344 89999999999999996532 445556666554 444322 12334677787
Q ss_pred ecCCc-------------------CcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDE-------------------SKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~-------------------~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+.... .+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 71 NPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp CSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 66432 36789999999999999999999988
No 32
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.84 E-value=1.9e-08 Score=90.20 Aligned_cols=101 Identities=10% Similarity=0.208 Sum_probs=70.1
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+.++|||+.-|.+.+ ..+ ++|||||.+..|.|||.... ..|.....+..++ |.........+ .=|.|.|.
T Consensus 9 ~~~~~~G~L~K~~~~~~-~~W-k~R~fvL~~~~L~yy~~~~~----~~~~g~i~L~~~~-v~~~~~~~~~~-~~~~F~i~ 80 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGV-KQW-NKRWFVLVDRCLFYYKDEKE----ESILGSIPLLSFR-VAAVQPSDNIS-RKHTFKAE 80 (117)
T ss_dssp CCCCEEEEEEEECTTSS-SCE-EEEEEEEETTEEEEESSTTC----CSCCEEEECSSCE-EEECCTTTTCC-CSSEEEEE
T ss_pred CCeeEEEEEEEeCCCCC-CCc-eEEEEEECCCEEEEECCCCC----CCcCCEEEeCCeE-EEEcCccccCC-CccEEEEE
Confidence 45679999999874432 344 99999999999999996532 3455555565554 44332211111 12566765
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.. ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 81 ~~--~~r~~~l~a~s~~e~~~Wi~al~~~~~ 109 (117)
T 2d9y_A 81 HA--GVRTYFFSAESPEEQEAWIQAMGEAAR 109 (117)
T ss_dssp CS--SSCEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred cC--CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 33 356789999999999999999999976
No 33
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.84 E-value=5.9e-09 Score=93.51 Aligned_cols=101 Identities=10% Similarity=0.158 Sum_probs=72.5
Q ss_pred CCCcceeeeEEEEEcccccccccceeeeEEEe--cceeeeeccCCCCCCCCCcceeeeecCceeEeec----ccee-eeC
Q 004240 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIR--GKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL----GRRR-FNH 114 (766)
Q Consensus 42 ~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~--~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~----g~~~-~~~ 114 (766)
..+.+.++|||+.-|.. ...+ ++|||||. +..|.|||.+.. ..|.....+..++.|+.. |+.. ..+
T Consensus 4 ~~~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~~~~~L~yy~~~~~----~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~ 76 (117)
T 1v5u_A 4 GSSGRSYEGILYKKGAF--MKPW-KARWFVLDKTKHQLRYYDHRMD----TECKGVIDLAEVEAVAPGTPTIGAPKTVDE 76 (117)
T ss_dssp SCCSSSEEEEEEECCCS--SSCC-EEEEEEEETTTTEEEEESSSSC----SSCCCEEEGGGEEEEECCCCCTTSCSSSCT
T ss_pred CcCCccEEEEEEecCCC--CCCc-eeeEEEEECCCCEEEEeecCCC----CccceEEEccCcEEEeecCccccccccCCC
Confidence 34567799999997753 3344 99999999 889999996543 346666777777766532 2211 112
Q ss_pred ceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 115 GDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 115 ~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+ |+|.|.. ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 77 ~--~~F~i~~---~~r~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 77 K--AFFDVKT---TRRVYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp T--TCEEEEE---SSCEEEEECSSHHHHHHHHHHHHTTCC
T ss_pred C--eEEEEEC---CCceEEEECCCHHHHHHHHHHHHHHhc
Confidence 1 4566633 467889999999999999999999976
No 34
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=98.84 E-value=9.9e-09 Score=90.46 Aligned_cols=93 Identities=12% Similarity=0.154 Sum_probs=64.2
Q ss_pred eeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEeecCC
Q 004240 48 YFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNRLD 127 (766)
Q Consensus 48 ~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn~~~ 127 (766)
|||||+.-|.. ...+ ++|||||++..|.|||.+.... ..|.....+ .+|.|+...-+ . +.|.|..+
T Consensus 1 ~eG~L~K~g~~--~k~W-k~R~fvL~~~~L~Yy~~~~~~~--~~~~g~i~L-~~~~v~~~~~~---~---~~F~i~~~-- 66 (103)
T 3rcp_A 1 MEGVLYKWTNY--LTGW-QPRWFVLDNGILSYYDSQDDVC--KGSKGSIKM-AVCEIKVHSAD---N---TRMELIIP-- 66 (103)
T ss_dssp CEEEEEEECCT--TTCE-EEEEEEEETTEEEEESSCC-----CCCSCEEEG-GGCEEECCTTC---S---SEEEEEET--
T ss_pred CceEEEEccCC--CCCe-eceEEEEECCEEEEEecCCccc--CCcccEEEe-eeeEEEEcCCC---C---ceEEEEeC--
Confidence 79999998743 3455 9999999999999999765322 234434444 35555432211 2 24555542
Q ss_pred cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 128 ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 128 ~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..+.+.|.|.|.+|...|+++|+.|+.
T Consensus 67 ~~r~~~l~a~s~~e~~~Wi~al~~a~~ 93 (103)
T 3rcp_A 67 GEQHFYMKAVNAAERQRWLVALGSSKA 93 (103)
T ss_dssp TTEEEEEECSSHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 356889999999999999999999965
No 35
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.83 E-value=2.5e-08 Score=88.30 Aligned_cols=100 Identities=15% Similarity=0.254 Sum_probs=68.4
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecc--eeeeeccCCCCCCCCCcceeeeecCceeEeecccee--eeCceEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK--YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR--FNHGDVYV 119 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~--~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~--~~~~~~yv 119 (766)
..+.++|||+.-|.. ..++ ++|||||.+. .|.|||... ...|.....+.+ |.|....... ...+.-++
T Consensus 5 ~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~~~~~L~yyk~~~----~~~~~g~i~L~~-~~v~~~~~~~~~~~~~~~~~ 76 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHR--RKNW-KVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRG-CVVTSVESNSNGRKSEEENL 76 (109)
T ss_dssp CCEEEEEEEEEECTT--TCCE-EEEEEEEETTTTEEEEECTTS----CSSCSEEEECTT-CEEEEECC--------CCSE
T ss_pred CceeEEEEEEEcCCC--CCCc-eEEEEEEeCCCcEEEEECCCC----CCCccEEEECCC-CEEEEccCCcccccCCCceE
Confidence 467799999997652 3444 9999999987 999998653 245666666666 4444322210 01113356
Q ss_pred EEEeecCCcCcceeeeccCHHHHHHHHHHHHHHH
Q 004240 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAK 153 (766)
Q Consensus 120 ~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~ 153 (766)
|.|.... ...+.|.|.|.+|+..|+++|+.|+
T Consensus 77 F~i~~~~--~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 77 FEIITAD--EVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp EEEECTT--CCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEeCC--CCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 7776542 3448999999999999999999986
No 36
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.80 E-value=4.8e-08 Score=87.48 Aligned_cols=100 Identities=11% Similarity=0.130 Sum_probs=73.0
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
+.+.++|||+.-|.. -..+ ++|||||++..|.|||.+. ...|.....+.+++.|+... -..+.-|.|.|.
T Consensus 3 ~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~~~L~yy~~~~----~~~~~g~i~L~~~~~~~~~~---~~~~~~~~F~i~ 72 (113)
T 1pls_A 3 PKRIREGYLVKKGSV--FNTW-KPMWVVLLEDGIEFYKKKS----DNSPKGMIPLKGSTLTSPCQ---DFGKRMFVFKIT 72 (113)
T ss_dssp CCCSEEEEEEEESSS--SSCC-EEEEEEEETTEEEEESSTT----CSSCSEEEESSSCCEESSCC---SSCCSSSEEEEE
T ss_pred CCCcEEEEEEEeCCC--CCCc-eEEEEEEECCEEEEEeCCC----CCCcceEEEcCCCEEEEecC---CCCCCccEEEEE
Confidence 456799999997642 2344 9999999999999999653 25677777777777654111 012233567776
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
... .+.+.|.|.|.+|+..|+++|+.|+..
T Consensus 73 ~~~--~r~~~l~a~s~~e~~~Wi~ai~~~~~~ 102 (113)
T 1pls_A 73 TTK--QQDHFFQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp ETT--TEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCC--CCEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 542 467889999999999999999999883
No 37
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.79 E-value=3e-08 Score=100.33 Aligned_cols=109 Identities=11% Similarity=0.163 Sum_probs=76.9
Q ss_pred ccCCCCCcceeeeEEEEEcccc--cccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCc
Q 004240 38 VGDKEKGYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHG 115 (766)
Q Consensus 38 ~~~~~~~~~~~egw~~~~~~~~--~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~ 115 (766)
+++..-..+.++|||+.-|... +...| ++|||||++..|.|||.... ..|.....+.+++.|...-.. ..++
T Consensus 98 ~~~~~l~~v~k~G~L~Kkg~~~~~~~k~W-kkRwfVL~~~~L~Yyk~~~~----~~p~g~I~L~~~~~v~~~~~~-~~~~ 171 (211)
T 1u5e_A 98 IAAQDLPFVIKAGYLEKRRKDHSFLGFEW-QKRWCALSKTVFYYYGSDKD----KQQKGEFAIDGYDVRMNNTLR-KDGK 171 (211)
T ss_dssp CCGGGCSSEEEEEEEEEEEHHHHTTTCCC-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTCEEEECGGGC-SSTT
T ss_pred cChhhcCCccEEEEEEEECCCCCcCCCCc-EeEEEEEECCEEEEEcCCCC----ccceEEEEeCCcEEEEcCCcc-ccCC
Confidence 3334445677999999988642 44555 99999999999999997653 356666677777766521100 1111
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.=|.|.|... ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 172 k~~~F~I~t~--~~r~~~l~A~s~~e~~~Wi~aL~~ai~ 208 (211)
T 1u5e_A 172 KDCCFEICAP--DKRIYQFTAASPKDAEEWVQQLKFILQ 208 (211)
T ss_dssp GGGEEEEECS--SSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 1256666653 247789999999999999999999987
No 38
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.79 E-value=2e-08 Score=94.60 Aligned_cols=101 Identities=18% Similarity=0.277 Sum_probs=74.3
Q ss_pred CcceeeeEEEEEcccc---cccccceeeeEEEecc-----eeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCc
Q 004240 44 GYFEYFGWVYHMGTNS---IGHEYCHLRFLFIRGK-----YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHG 115 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~---~g~~~~~~ry~vl~~~-----~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~ 115 (766)
..+.++|||+.-|.++ .+..--++|||||.+. .|.|||.++.+ ..|.....+..+..|... ...
T Consensus 16 ~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~---~~~~g~I~L~~~~~~~~~-----~~~ 87 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKIS---KEPKGSIFLDSCMGVVQN-----NKV 87 (150)
T ss_dssp CCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCCS---SCCSEEECTTTCCEECCC-----CSS
T ss_pred CCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCCC---CCcCcEEecccCEEEecC-----CCC
Confidence 5667999999987653 2333349999999997 99999987632 456666666666555421 122
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.-|+|.|.... .+.+.|.|.|.+|+..|+.+|+.|+.
T Consensus 88 ~~~~F~i~~~~--~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 88 RRFAFELKMQD--KSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp CTTEEEEECSS--SCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeCC--CcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 33567777652 36789999999999999999999998
No 39
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.77 E-value=1e-08 Score=91.66 Aligned_cols=104 Identities=11% Similarity=0.197 Sum_probs=67.0
Q ss_pred cceeeeEEEEEcccccccccceeeeEEE-ecceeeeeccCCCCCC-CCCcceeeeec--CceeEeeccceeeeCceEEEE
Q 004240 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFI-RGKYVEMYKRDPHENP-GIKPIRRGVIG--PTLMVEELGRRRFNHGDVYVM 120 (766)
Q Consensus 45 ~~~~egw~~~~~~~~~g~~~~~~ry~vl-~~~~~~~yk~~p~~~~-~~~pir~~~i~--~~~rv~d~g~~~~~~~~~yv~ 120 (766)
.+.++|||+.-|. .-..+ ++||||| .+..|.|||.+....| +.+||..+.|+ ..+.|++.-...... .=|.|
T Consensus 4 ~~~~~G~L~K~g~--~~k~W-kkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~-~~~~F 79 (112)
T 3aj4_A 4 AFVKSGWLLRQST--ILKRW-KKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDTQPPDGKS-KDCML 79 (112)
T ss_dssp SCSEEEEEEEECS--SSCCE-EEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSCCCSTTCC-GGGEE
T ss_pred ceeEEEEEEeeCC--CCCCe-eceEEEEeeCCEEEEEcCCCCCCCCccccccccceeecccccccccCCCCCCC-cCcEE
Confidence 4569999999875 22344 9999999 9999999997764433 23455554433 111222100000011 02456
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.|..+ ..+.+.|.|.|.+|+..|+++|++|+.
T Consensus 80 ~i~~~--~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 80 QIVCR--DGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp EEEET--TSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEec--CCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 66532 357789999999999999999999853
No 40
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.76 E-value=8.3e-08 Score=92.42 Aligned_cols=95 Identities=11% Similarity=0.143 Sum_probs=68.9
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeec-cceeeeCceEEEEEEee
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL-GRRRFNHGDVYVMRLYN 124 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~-g~~~~~~~~~yv~~~yn 124 (766)
+.++|||+.-|.. + ..| ++|||||+++.|.|||.+.... |.....+..++.|++. -.+. . =+.|+|..
T Consensus 18 v~keG~L~Kkg~~-~-k~W-krRWFvLk~~~L~Yyk~~~d~~----~~g~I~L~~~~~~~~~~~~~~--~--~~~F~I~t 86 (149)
T 1x1f_A 18 LYFEGFLLIKRSG-Y-REY-EHYWTELRGTTLFFYTDKKSII----YVDKLDIVDLTCLTEQNSTEK--N--CAKFTLVL 86 (149)
T ss_dssp EEEEEEEEEECTT-C-CSC-EEEEEEEETTEEEEESCSSCSS----CSEECCCSSCCEEEECCCTTS--C--CCEEEEEC
T ss_pred ccEEEEEEEeCCC-C-CCc-eeEEEEEcCCEEEEEeCCCccc----cCcEEECCCceEEeeccCCCC--c--CcEEEEEc
Confidence 7799999998742 2 555 9999999999999999765433 4445555555555332 2211 1 25666654
Q ss_pred cCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 125 RLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 125 ~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..+.+.|.|.|.||...|+++|+.++.
T Consensus 87 ---~~r~~~f~A~s~ee~~eWi~aI~~v~~ 113 (149)
T 1x1f_A 87 ---PKEEVQLKTENTESGEEWRGFILTVTE 113 (149)
T ss_dssp ---SSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---CCCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 356788999999999999999999977
No 41
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.76 E-value=4.7e-08 Score=89.53 Aligned_cols=102 Identities=15% Similarity=0.255 Sum_probs=70.7
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecc--eeeeeccCCCCCCCCCcceeeeecCceeEeeccceee--eCceEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK--YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRF--NHGDVY 118 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~--~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~--~~~~~y 118 (766)
...+.++|||+.-|. ....| ++|||||.+. .|.|||... ...|.....+.. |.|+......- ..+.-|
T Consensus 15 ~~~~~~~G~L~K~g~--~~~~W-k~R~fvL~~~~~~L~yy~~~~----~~~~~g~i~L~~-~~v~~~~~~~~~~~~~~~~ 86 (129)
T 1x05_A 15 RGVIIKQGCLLKQGH--RRKNW-KVRKFILREDPAYLHYYDPAG----AEDPLGAIHLRG-CVVTSVESNSNGRKSEEEN 86 (129)
T ss_dssp CSEEEEEEEEEECCS--SCCCC-EEEEEEEEETTTEEEEECSSC----CSSCSEEEECTT-CEEEECCCCCCSSSCSSCS
T ss_pred cCCceEEEEEEecCC--CCCCC-eeEEEEEeCCCCEEEEECCCC----CCcceeEEEccC-CEEEEccCCccccccCCCe
Confidence 456779999999654 23344 8999999986 899998653 245666666666 44543322210 112345
Q ss_pred EEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 119 VMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 119 v~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.|.|.... ...+.|.|.|.+|+..|+++|+.|+.
T Consensus 87 ~F~i~~~~--~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 87 LFEIITAD--EVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp EEEEECTT--CCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCC--CCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 67776542 34589999999999999999999987
No 42
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.75 E-value=1.6e-08 Score=90.33 Aligned_cols=96 Identities=9% Similarity=0.200 Sum_probs=65.7
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+.++|||+.. ....+ ++|||||+++.|.|||.+.. . ..|.-.+.+ .+|.|+.. .. .+.=|+|.|.
T Consensus 6 ~~~~~~G~L~K~----~~k~W-k~RwfvL~~~~L~yyk~~~~-~--~~~~~~i~l-~~~~v~~~-~~---~~~~~~F~i~ 72 (107)
T 2cof_A 6 SGLETSSYLNVL----VNSQW-KSRWCSVRDNHLHFYQDRNR-S--KVAQQPLSL-VGCEVVPD-PS---PDHLYSFRIL 72 (107)
T ss_dssp CCCTTCCEEEEE----ETTEE-EEEEEEECSSCEEEECSSTT-C--SEEEEEECT-TTCEEECC-CB---TTBSCEEEEE
T ss_pred CCCcEeEEEEEe----cCCCc-ceEEEEEECCEEEEEeCCcc-c--CCCeeEEec-cceEEEEC-CC---CCCCeEEEEE
Confidence 456799999996 33344 99999999999999997654 2 233322222 34445421 11 1233677777
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.. ..+.+.|.|.|.+|+..|+++|+.|+.
T Consensus 73 ~~--~~r~~~l~A~s~~e~~~Wi~al~~~~~ 101 (107)
T 2cof_A 73 HK--GEELAKLEAKSSEEMGHWLGLLLSESG 101 (107)
T ss_dssp ET--TEEEEEEECSSHHHHHHHHHHHHHHSS
T ss_pred eC--CCeEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 63 255689999999999999999998854
No 43
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.75 E-value=5.3e-08 Score=90.38 Aligned_cols=101 Identities=14% Similarity=0.202 Sum_probs=65.5
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEE-ecceeeeeccCCCCCCCCCcceeeeecCceeEeeccc-------eeeeCc
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFI-RGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGR-------RRFNHG 115 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl-~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~-------~~~~~~ 115 (766)
+.+.++|||+.-|. .-..| ++||||| ++..|.|||.+.... |..+..+...|.-...|- ....+
T Consensus 6 ~~v~~~G~L~K~g~--~~k~W-kkRwFVL~~~~~L~Yyk~~~~~~----~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~- 77 (130)
T 2d9v_A 6 SGLVRGGWLWRQSS--ILRRW-KRNWFALWLDGTLGYYHDETAQD----EEDRVVIHFNVRDIKVGQECQDVQPPEGRS- 77 (130)
T ss_dssp CCEEEEEEEEEECS--SSCCE-EEEEEEEETTTEEEEESSSSTTS----EEEEEECTTTEEEEEEGGGCSSCCCCSSCC-
T ss_pred CceeEEEEEEeecC--ccCCc-eeeEEEEccCCEEEEEeCCCCCC----cCceEecccceeEEeccccccccCCCCCCC-
Confidence 56779999999764 33466 9999999 899999999665332 222333332221111110 00011
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.=|.|.|..+. .+.+.|.|.|.+|+..|++||+.|+.
T Consensus 78 ~~~~F~I~~~~--~r~~~l~A~s~~e~~~Wi~al~~a~~ 114 (130)
T 2d9v_A 78 RDGLLTVNLRE--GSRLHLCAETRDDAIAWKTALMEANS 114 (130)
T ss_dssp TTTEEEEEETT--SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCcEEEEEeCC--CCEEEEEcCCHHHHHHHHHHHHHHHc
Confidence 11566776532 35688999999999999999999976
No 44
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.71 E-value=1.5e-08 Score=89.33 Aligned_cols=99 Identities=14% Similarity=0.184 Sum_probs=61.2
Q ss_pred eeeEEEEEccc------ccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecC-ceeEeeccceeeeCceEEEE
Q 004240 48 YFGWVYHMGTN------SIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGP-TLMVEELGRRRFNHGDVYVM 120 (766)
Q Consensus 48 ~egw~~~~~~~------~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~-~~rv~d~g~~~~~~~~~yv~ 120 (766)
|||||++-+.. ....++ ++|||||++..|.|||.+....++..+...+.|+- +|.|+-. .. ..+.=|+|
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~W-k~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~--~~~~~~~F 76 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSW-HNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVA-LD--YKKKKHVF 76 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCC-EEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEEC-SS--CCSSSSEE
T ss_pred CccEEEEEEEEeCCCccCCCCCh-hEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEc-cc--ccCCccEE
Confidence 79999998721 233444 99999999999999996542100011111223332 1222210 01 11112577
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQA 152 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~ 152 (766)
.|.. ...+.+.|.|.|.+|+..|+++|+.|
T Consensus 77 ~i~~--~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 77 KLRL--SDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp EEEC--TTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred EEEe--cCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 7763 23478899999999999999999875
No 45
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.70 E-value=3.7e-08 Score=94.82 Aligned_cols=101 Identities=11% Similarity=0.190 Sum_probs=60.9
Q ss_pred cceeeeEEEEEc-----ccc---cccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecC-ceeEeeccceeeeCc
Q 004240 45 YFEYFGWVYHMG-----TNS---IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGP-TLMVEELGRRRFNHG 115 (766)
Q Consensus 45 ~~~~egw~~~~~-----~~~---~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~-~~rv~d~g~~~~~~~ 115 (766)
.+.+||||++-. ..| ....| ++|||||++..|.|||.+.... ..|.....|+. +|.|+-. . ...+
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~W-kkRwfvL~~~~L~yyk~~~~~~--~~~~g~i~l~~~~~~~~~~-~--~~~~ 75 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPW-KQMYVVLRGHSLYLYKDKREQT--TPSEEEQPISVNACLIDIS-Y--SETK 75 (168)
T ss_dssp -CCEEEEEEEEECC------------CC-EEEEEEEETTEEEEESCTTCC----------CEECSSCEEEEC-S--SSCS
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCc-eEEEEEEeCCEEEEEECCcccc--cccCCceEecccceEEEec-c--ccCC
Confidence 457999999521 012 23344 9999999999999999764321 22333333333 2332200 0 0111
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.=|+|.|... ++.+.|.|.|.+|+..|+++|+.|+.
T Consensus 76 ~~~~F~I~t~---~r~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 76 RKNVFRLTTS---DCECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp CSSEEEEECS---SCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEeC---CceEEEEcCCHHHHHHHHHHHHHHHh
Confidence 2267888754 36799999999999999999999986
No 46
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.70 E-value=8.6e-08 Score=89.81 Aligned_cols=99 Identities=17% Similarity=0.282 Sum_probs=72.1
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEeec
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNR 125 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn~ 125 (766)
+.-+|||+.-. ..+...=.+.|||||.+.+|.|||.+....|. -.|--.++.|.|..-.... .=|.|.|||.
T Consensus 12 VirkGWL~k~~-~g~~k~~wk~rWFVLt~~~L~yyKd~~eke~~-----G~IpL~~~~vr~v~~~~~~--rk~~F~l~~~ 83 (125)
T 1dyn_A 12 VIRKGWLTINN-IGIMKGGSKEYWFVLTAENLSWYKDDEEKEKK-----YMLSVDNLKLRDVEKGFMS--SKHIFALFNT 83 (125)
T ss_dssp EEEEEEEEESC-CCGGGTSSEEEEEEEESSEEEEESSTTCSCEE-----EEEECTTEEEEECCSCSSS--SCEEEEEEET
T ss_pred eEEEEEEEEec-CccccCCceeeEEEEeccceeeecCCcccccc-----eEEECCCceEeccCCCCCC--CceEEEEECC
Confidence 67999999832 23444424999999999999999988755532 3333466667664322222 3489999996
Q ss_pred CC-----cCcceeeeccCHHHHHHHHHHHHHH
Q 004240 126 LD-----ESKKGEIACATAGEARKWMEAFDQA 152 (766)
Q Consensus 126 ~~-----~~~~~~~aa~~~eea~~W~~~~~~~ 152 (766)
-. ..++++|+|.|.||...|+.||..|
T Consensus 84 d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra 115 (125)
T 1dyn_A 84 EQRNVYKDYRQLELACETQEEVDSWKASFLRA 115 (125)
T ss_dssp TSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT
T ss_pred CCccccccceEEEEeCCCHHHHHHHHHHHHhC
Confidence 42 2468999999999999999999877
No 47
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.66 E-value=8.3e-08 Score=88.18 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=71.4
Q ss_pred CCCcceeeeEEEEEcccccccccceeeeEEEecc---eeeeeccCCCCCCCCCcceeeeecCceeEe--eccceeeeCce
Q 004240 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK---YVEMYKRDPHENPGIKPIRRGVIGPTLMVE--ELGRRRFNHGD 116 (766)
Q Consensus 42 ~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~---~~~~yk~~p~~~~~~~pir~~~i~~~~rv~--d~g~~~~~~~~ 116 (766)
.+....+.|||++-+ + +.++ ++|+|||.++ +|.|||..- + ..|+.++.+.++ .|. +.+.+.- .
T Consensus 4 ~~~~~~~~G~L~k~~--~-~~~W-kkrWfVL~~~~~~~Ly~Yk~~~-d---~~p~g~I~L~g~-~V~~~~~~~~~~---~ 71 (112)
T 2coc_A 4 GSSGSLLCGPLRLSE--S-GETW-SEVWAAIPMSDPQVLHLQGGSQ-D---GRLPRTIPLPSC-KLSVPDPEERLD---S 71 (112)
T ss_dssp CCSSSSSEEEEEEES--S-SSCE-EEEEEECCTTCTTCEEEECCTT-C---SSSCSEECGGGC-EEECCCSSSCCS---S
T ss_pred ccCCceEEEEEEecC--C-CCCc-eEEEEEEECCCccEEEEECCCC-c---cCcceEEEcCCC-EEEecCcccccC---C
Confidence 345556889999943 2 7787 9999999985 799999543 2 457766666655 666 3443321 2
Q ss_pred EEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 117 ~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
=|+|.|... .+...|+|.|.|++.+|+++|+.|+.
T Consensus 72 ~~~Fki~~~---~~~y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 72 GHVWKLQWA---KQSWYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp SEEEEEEET---TEEEEEEESSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecC---CeEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 368888832 35689999999999999999999865
No 48
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.64 E-value=8.7e-08 Score=93.67 Aligned_cols=106 Identities=8% Similarity=0.029 Sum_probs=74.0
Q ss_pred cceeeeEEEEEcccc--cccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeec--------ccee---
Q 004240 45 YFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--------GRRR--- 111 (766)
Q Consensus 45 ~~~~egw~~~~~~~~--~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~--------g~~~--- 111 (766)
.+.+||||+.-|.++ +++.--++|||||.++.|.|||.+....++..|..+..+...+-|+.. +++.
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~ 81 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRR 81 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchhcccccc
Confidence 356899999977554 565555999999999999999974211113456666666666556533 1110
Q ss_pred ------------eeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 112 ------------FNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 112 ------------~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+.++. |.|.|-.. .+.+-|.|.|.+|...|+++|+.++.
T Consensus 82 ~~~~~~~~~~~i~~~~~-~~F~I~t~---~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 82 GEESSEMEQISIIERFP-YPFQVVYD---EGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp ------CCTTHHHHCCC-EEEEEEET---TCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccccccc-ccEEEEeC---CceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 00001 78888653 36788999999999999999999987
No 49
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.62 E-value=1.4e-07 Score=88.08 Aligned_cols=101 Identities=11% Similarity=0.172 Sum_probs=73.7
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEe---cceeeeeccCCCCCC-CCCcceeeeecCceeEeecc-ceeeeCceEEEE
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIR---GKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVEELG-RRRFNHGDVYVM 120 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~---~~~~~~yk~~p~~~~-~~~pir~~~i~~~~rv~d~g-~~~~~~~~~yv~ 120 (766)
..++|||+.-|+.. ..--++|||||+ +++|.||| +|.+.+ +..|+.+..+..++.|.+.- ....+.+ |.|
T Consensus 15 ~~~~G~L~K~g~~~--~k~WkrRwFvL~~~~~~~L~Y~k-~~~~~~~~~~~~G~I~L~~~~~V~~~~~~~~~~~~--~~F 89 (126)
T 1v5p_A 15 NRICGFLDIEDNEN--SGKFLRRYFILDTQANCLLWYMD-NPQNLAVGAGAVGSLQLTYISKVSIATPKQKPKTP--FCF 89 (126)
T ss_dssp CCEECCEEEECTTC--SSCEEEEEEEEETTTTEEEEESS-CTTTSCTTCCCSEEEETTTCCEEEECCTTTSCSCS--SEE
T ss_pred CceEEEEEEeCCCC--CCCccceEEEEecCCCCEEEEEC-CCCCCCCCceeeEEEECCCccEEecCCcccCCCCC--EEE
Confidence 35899999988543 334599999999 77776666 554322 47899999999888998654 1222333 344
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.|. ...+...|+|.|.+|...||++|..|+.
T Consensus 90 ~i~---t~~r~y~l~A~s~~e~~~Wi~al~~a~~ 120 (126)
T 1v5p_A 90 VIN---ALSQRYFLQANDQKDLKDWVEALNQASK 120 (126)
T ss_dssp EEE---CSSCEEEEECSSHHHHHHHHHHHHHTTT
T ss_pred EEE---CCCEEEEEECCCHHHHHHHHHHHHHHHh
Confidence 553 3467799999999999999999999965
No 50
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.62 E-value=1.3e-07 Score=96.49 Aligned_cols=100 Identities=11% Similarity=0.203 Sum_probs=78.8
Q ss_pred CCCcceeeeEEEEEccc--ccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEE
Q 004240 42 EKGYFEYFGWVYHMGTN--SIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYV 119 (766)
Q Consensus 42 ~~~~~~~egw~~~~~~~--~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv 119 (766)
..+.+.++|||+.-|.. ++++.--++|||||++..|.|||.+.. ..|..+..+..+..|++...+ =|.
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~----~~~~g~I~L~~~~~v~~~~~k------~~~ 123 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE----EKLKGTVEVRSAKEIIDNTNK------ENG 123 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC----CSEEEEEEGGGCSEEEEETTT------TSE
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC----cceeEEEEcCCCEEeccCCCC------CcE
Confidence 44667799999998873 466555699999999999999996543 467777777887777765421 146
Q ss_pred EEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 120 ~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|.|.. .++.+.|.|.|.+|+..|+++|++|+.
T Consensus 124 F~I~t---~~r~~~l~A~s~~e~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 124 IDIIM---ADRTFHLIAESPEDASQWFSVLSQVHS 155 (228)
T ss_dssp EEEEC---SSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEc---CCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 77754 467899999999999999999999987
No 51
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.62 E-value=1.1e-07 Score=86.80 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=69.3
Q ss_pred CcceeeeEEEEEccc-----ccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCc-eeEeeccceeeeCceE
Q 004240 44 GYFEYFGWVYHMGTN-----SIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPT-LMVEELGRRRFNHGDV 117 (766)
Q Consensus 44 ~~~~~egw~~~~~~~-----~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~-~rv~d~g~~~~~~~~~ 117 (766)
..+.+||||++-+.. +.+..--++|||||++..|.|||.+....++..|.-...|+-. |.|+-. .+ +.+.=
T Consensus 6 ~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~-~~--~~~r~ 82 (123)
T 1wjm_A 6 SGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSVA-FD--YRKRK 82 (123)
T ss_dssp CCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEEC-TT--CSSCS
T ss_pred CCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEeec-cc--ccCCC
Confidence 556799999986643 3334444999999999999999965443322222222333332 334311 11 11223
Q ss_pred EEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 118 yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|+|+|... ..+...|.|.|.+|+..|+++|+.|+.
T Consensus 83 ~~F~i~~~--~~~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 83 HVFKLGLQ--DGKEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp SEEEEECS--SSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEc--CCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence 67777653 236788999999999999999999987
No 52
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.61 E-value=1.9e-07 Score=85.37 Aligned_cols=102 Identities=15% Similarity=0.308 Sum_probs=69.4
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEe--cceeeeeccCCCCCCCCCcceeeeecCcee--Eeec----cceeeeC
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIR--GKYVEMYKRDPHENPGIKPIRRGVIGPTLM--VEEL----GRRRFNH 114 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~--~~~~~~yk~~p~~~~~~~pir~~~i~~~~r--v~d~----g~~~~~~ 114 (766)
...+.++|||+.-|.. ...| ++|||||. +..|.|||.+.. ...|.....+.++.. |++. +++..+
T Consensus 15 ~~~~~~~G~L~K~g~~--~~~W-k~R~fvL~~d~~~L~yy~~~~~---~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~- 87 (129)
T 1x1g_A 15 SGTVVKQGYLAKQGHK--RKNW-KVRRFVLRKDPAFLHYYDPSKE---ENRPVGGFSLRGSLVSALEDNGVPTGVKGNV- 87 (129)
T ss_dssp CSEEEEEEEEEEECSS--SSSE-EEEEEEEEESSCEEEEECSSSC---CSSCSCCEESTTCCCEECCSSSSCSSCSSCC-
T ss_pred CCCEEEEEEEEEECCC--CCCe-eeEEEEEeCCCCeEEEeCCCCc---CCccceEEECcCCEEEEeCCCCCcccccCCC-
Confidence 3567799999997654 3444 99999999 579999996421 245666666655332 2333 112110
Q ss_pred ceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 115 GDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 115 ~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.-|.|.|.... ...+.|.|.|.+|+..|+++|+.|+.
T Consensus 88 -~~~~F~I~~~~--~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 88 -QGNLFKVITKD--DTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp -CSSCEEECCTT--CCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred -CCceEEEEcCC--CCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 22567776542 24589999999999999999999976
No 53
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=98.57 E-value=5.1e-07 Score=84.06 Aligned_cols=105 Identities=13% Similarity=0.221 Sum_probs=70.1
Q ss_pred CcceeeeEEEEE----cccccccccceeeeEEEecceeeeeccCCCCC-------CCCCcceeeeecCceeEeeccceee
Q 004240 44 GYFEYFGWVYHM----GTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN-------PGIKPIRRGVIGPTLMVEELGRRRF 112 (766)
Q Consensus 44 ~~~~~egw~~~~----~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~-------~~~~pir~~~i~~~~rv~d~g~~~~ 112 (766)
..+.++|||++- +-.++.+++ ++|||||+|+.|.|||.+-... ....|.....+.++ .|+.- .+..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~W-k~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~-~v~~~-~~~~ 86 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNW-GPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGA-ALAHG-RHLS 86 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCC-EEEEEEEESSEEEEESCC--------------CCSEEEECTTC-EEEEC-TTSC
T ss_pred cceeEEEEEEEeeeccCCCcCCCCc-eEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCc-EEEEC-CCCC
Confidence 467799999984 234455666 8999999999999999763110 12456666666544 44421 1111
Q ss_pred eCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 113 NHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 113 ~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
..+ +||+|... .....-|.|.|.+|+..|+++|+.||.+
T Consensus 87 kr~--~~F~l~t~--~~~~yl~qA~s~~e~~~Wi~aI~~~i~~ 125 (129)
T 2p0d_A 87 SRR--NVLHIRTI--PGHEFLLQSDHETELRAWHRALRTVIER 125 (129)
T ss_dssp SSS--SEEEEECT--TSCEEEEECSCHHHHHHHHHHHHHHHHH
T ss_pred CCC--cEEEEEcC--CCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 222 56777532 2345779999999999999999999984
No 54
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.57 E-value=1.6e-07 Score=91.05 Aligned_cols=105 Identities=7% Similarity=0.026 Sum_probs=70.3
Q ss_pred CcceeeeEEEEEcccc--cccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccce--eeeCceEEE
Q 004240 44 GYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRR--RFNHGDVYV 119 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~--~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~--~~~~~~~yv 119 (766)
..+.+||||+.=|.++ ++..--++|||||.+..|.|||.+.... .|.-+..+...+.|+...-. ...-..-|.
T Consensus 13 ~~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~~---~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~ 89 (164)
T 2lul_A 13 FNTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEKK---YRKGFIDVSKIKCVEIVKNDDGVIPCQNKYP 89 (164)
T ss_dssp SSEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSSC---CCCCEEEGGGCCEEEECCCCSSSCCSSSCSE
T ss_pred CCeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCccc---ccccEEEEeeeEEEEeccccccCccccccee
Confidence 4667999999987654 4444448999999999999999654322 22223334444445432221 111223355
Q ss_pred EEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 120 ~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|.|... .+.+-|.|.|.+|+..|+++|++++.
T Consensus 90 f~i~t~---~rt~~l~A~s~~e~~~Wi~aL~~~i~ 121 (164)
T 2lul_A 90 FQVVHD---ANTLYIFAPSPQSRDLWVKKLKEEIK 121 (164)
T ss_dssp EEEECS---SCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEecC---CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 566543 46788999999999999999999988
No 55
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.56 E-value=2.3e-07 Score=84.21 Aligned_cols=96 Identities=16% Similarity=0.169 Sum_probs=64.6
Q ss_pred eeeEEEEE-cccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCc-ee--EeeccceeeeCceEEEEEEe
Q 004240 48 YFGWVYHM-GTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPT-LM--VEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 48 ~egw~~~~-~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~-~r--v~d~g~~~~~~~~~yv~~~y 123 (766)
+||||++= |.++.+..-=++|||||+++.|.|||.+-. ..|+.+.-+.+. |. +.. ...+.=++|.|.
T Consensus 2 keG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~----~~p~~~i~l~~~~~~~~~~~-----~~~~r~~~F~l~ 72 (112)
T 3cxb_B 2 KEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD----VIPLLSVNMGGEQCGGCRRA-----NTTDRPHAFQVI 72 (112)
T ss_dssp EEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSC----CSCSEEEETTC-CEEEEEEC-----CCSSCTTEEEEE
T ss_pred ceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCC----CCccceEEecCCEEEeeecc-----CCCCCCeEEEEE
Confidence 79999854 434444444499999999999999996532 345544444432 43 111 112223477776
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.+. ....-|.|.|.||+..|+++|..|+.
T Consensus 73 ~~~--~~~y~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 73 LSD--RPCLELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp ETT--SCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred cCC--CCEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 543 34678999999999999999999977
No 56
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=98.49 E-value=2.1e-07 Score=85.81 Aligned_cols=105 Identities=9% Similarity=0.136 Sum_probs=60.5
Q ss_pred cceeeeEEEEEcccccccccceeeeEEEec-ceeeeeccCCC---C-CCCCCcceeeeec--------CceeEeec----
Q 004240 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRG-KYVEMYKRDPH---E-NPGIKPIRRGVIG--------PTLMVEEL---- 107 (766)
Q Consensus 45 ~~~~egw~~~~~~~~~g~~~~~~ry~vl~~-~~~~~yk~~p~---~-~~~~~pir~~~i~--------~~~rv~d~---- 107 (766)
.+.++|||+.-+.+.+...| ++|||||++ ..|.||+.+.. . ...++.+....+. .+|.+...
T Consensus 3 ~~~k~G~L~K~~g~~~~k~W-kkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~~~~~~~~~ 81 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEW-KKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSASGS 81 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCE-EEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCCCSCCSCCC
T ss_pred cceeEEEEEEecCCCccCCc-cEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccccccccccc
Confidence 45699999997544455667 999999997 67777764110 0 0011111111110 01111100
Q ss_pred -cceeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 108 -GRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 108 -g~~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
+... .+ =|.|.|... ..+...|.|.|.+|...|++||+.||..
T Consensus 82 ~~~~~-~~--~~~F~I~t~--~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 82 AGQAE-EE--NFEFLIVSS--TGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp CSSCC-CC--CCCEEEECT--TSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred ccccc-cC--CceEEEEcC--CCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 0000 11 134555433 2367899999999999999999999873
No 57
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.45 E-value=5e-07 Score=93.69 Aligned_cols=107 Identities=10% Similarity=0.115 Sum_probs=71.8
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCC-CCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPG-IKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~-~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
..+.++||||.-|.++ ..| ++|||||+++.|.|||......|. .+|+-. +-+-.+-....+++......=|.|+|
T Consensus 166 ~~p~~~G~L~k~~~~~--k~W-kkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~-l~~~~v~~~~~~~~~~~~~~~~~F~i 241 (291)
T 3tca_A 166 IVPELEGALYLKEDGK--KSW-KRRYFLLRASGIYYVPKGKTKTSRDLACFIQ-FENVNIYYGIQCKMKYKAPTDHCFVL 241 (291)
T ss_dssp CCCCCEEEEEEECTTS--SCE-EEEEEEECSSEEEECCTTCCSSTTTCEEEEE-GGGCEEEEECSHHHHHCCSSSCEEEE
T ss_pred CCCceEEEEEEeCCCC--CCc-eEEEEEEeCCEEEEEecCccccccCceeecc-ceeEEEEecCccccccCCCCCeEEEE
Confidence 4567999999977653 455 999999999999999976655542 222211 11122222333444444444578888
Q ss_pred eecCC---cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLD---ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~---~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..... ..+..-|+|.|.+|...||.||+.|+-
T Consensus 242 ~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak~ 276 (291)
T 3tca_A 242 KHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAKY 276 (291)
T ss_dssp ECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 75432 234467999999999999999998863
No 58
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=98.42 E-value=1.1e-06 Score=84.96 Aligned_cols=102 Identities=12% Similarity=0.235 Sum_probs=73.9
Q ss_pred eeeEEEEEcccccccccceeeeEEEecceeeeeccCCCC---------C----C-----------------CCCc-----
Q 004240 48 YFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHE---------N----P-----------------GIKP----- 92 (766)
Q Consensus 48 ~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~---------~----~-----------------~~~p----- 92 (766)
.+||+|. ..++-..| ++|||||.+..|.|+|..-.+ . | ...|
T Consensus 3 k~G~L~~--~~~~~~~w-~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~~~~~~~~~~~~~n~~fh~~~~~~~e~~~~~l 79 (150)
T 2fjl_A 3 KNGILYL--EDPVNHEW-YPHYFVLTSSKIYYSEETSSDQGNEDEEEPKEASGSTELHSSLEVLFQGPNPAILEPEREHL 79 (150)
T ss_dssp EEEEEEE--EETTTTEE-EEEEEEEETTEEEECCCCSCSSCCSCCCCSCCCCCSCCCCCCSSSGGGSSCSTTSCTTCSSS
T ss_pred cceEEEe--ecCCCCCc-eEeEEEEECCEEEEEeeccccccccCcccccccCCchhhcccchhccccCCccccchhHhcc
Confidence 5899999 56899999 999999999999998822110 0 0 0111
Q ss_pred ---------ceeeeecCceeEeeccceeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 93 ---------IRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 93 ---------ir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.+..|.=.+|.|+..- .-.+..-|||+|-.+......+.|||.|-||+..||.||++|+.
T Consensus 80 ~E~~~lG~l~kG~IdL~gc~V~~~~--~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 80 DENSPLGDLLRGVLDVPACQIAIRP--EGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp CTTTTTTTCCCEEECSTTCEEEEET--TCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred cccccccccccceEecCccEEEecc--CCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 0344444778887521 11224679999977755566799999999999999999999975
No 59
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=98.41 E-value=1.2e-06 Score=91.61 Aligned_cols=109 Identities=14% Similarity=0.236 Sum_probs=71.8
Q ss_pred CCCCcceeeeEEEEE------ccccc----ccccceeeeEEEecceeeeeccCCCCC--CCCCcceeeeecCceeEeecc
Q 004240 41 KEKGYFEYFGWVYHM------GTNSI----GHEYCHLRFLFIRGKYVEMYKRDPHEN--PGIKPIRRGVIGPTLMVEELG 108 (766)
Q Consensus 41 ~~~~~~~~egw~~~~------~~~~~----g~~~~~~ry~vl~~~~~~~yk~~p~~~--~~~~pir~~~i~~~~rv~d~g 108 (766)
...+.+.++|||++- ...++ ...| ++|||||++..|.|||.+.... ....|.....+. +|.|+..-
T Consensus 6 ~~~~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~W-krRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~-~~~v~~~~ 83 (263)
T 3a8p_A 6 KEQGVVRKAGWLFFKPLVTLQKERKLELVARRKW-KQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAE-DSIVQSVP 83 (263)
T ss_dssp ----CEEEEEEEEEEEEEEEEGGGEEEECTTCCC-EEEEEEEETTEEEEESSCCC------CCCSEEEECT-TCEEEECT
T ss_pred ccCCCeEEEEEeeecccccccCCCCccCccCCCc-eEEEEEEcCCEEEEEecCcccccccccCccceEEcC-CcEEEECC
Confidence 344677899999932 23333 3345 8999999999999999865321 135676666665 44454321
Q ss_pred ceeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 109 RRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 109 ~~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
-.. . .=|+|.|... ..+...|.|.|.+|+..|+++|+.|+...
T Consensus 84 ~~~--k-k~~~F~I~t~--~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~ 126 (263)
T 3a8p_A 84 EHP--K-KEHVFCLSNS--CGDVYLFQATSQTDLENWVTAIHSACASL 126 (263)
T ss_dssp TCS--S-CSSEEEEECT--TSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred cCC--C-CCCEEEEEcC--CCcEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 111 1 1367777765 35668899999999999999999999844
No 60
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=98.39 E-value=1.3e-06 Score=82.22 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=74.4
Q ss_pred eeeeEEEEE-----cccccccccceeeeEEEecceeeeeccCCCCC---C--CCCcceeeeecCceeEeeccceeeeCce
Q 004240 47 EYFGWVYHM-----GTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN---P--GIKPIRRGVIGPTLMVEELGRRRFNHGD 116 (766)
Q Consensus 47 ~~egw~~~~-----~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~---~--~~~pir~~~i~~~~rv~d~g~~~~~~~~ 116 (766)
.|+|.+++- |...+-+++ +.|||||.|+.|-||+.+.... + ...|.+...| .+++|+. .-+.+.
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksW-kr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L-~g~~V~~----~e~~~~ 75 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSW-TRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSI-VGWMVQL----PDDPEH 75 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCC-EEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEEC-TTCEEEC----CCCTTS
T ss_pred ceeeeeeeeehhhcCCcccccCc-ccEEEEEeCCEEEEEcccccccccccccccCCCceEEe-CCCEEEe----cCCCCC
Confidence 589999976 555444555 8999999999999999663111 0 2467666666 5566651 223444
Q ss_pred EEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 117 VYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 117 ~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
=++|.|+|... .+...|.|.|.+|+..|+.||..|+.
T Consensus 76 ~~~F~L~~~~~-G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 76 PDIFQLNNPDK-GNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp TTEEEEECTTS-CSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeeCCC-CCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 57899997633 56799999999999999999999987
No 61
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=98.38 E-value=3.9e-07 Score=83.40 Aligned_cols=105 Identities=10% Similarity=0.089 Sum_probs=65.4
Q ss_pred CcceeeeEEEEEcc------cccccccceeeeEEEecceeeeeccCCCCCC-CCCcce-eeeec-CceeEeeccceeeeC
Q 004240 44 GYFEYFGWVYHMGT------NSIGHEYCHLRFLFIRGKYVEMYKRDPHENP-GIKPIR-RGVIG-PTLMVEELGRRRFNH 114 (766)
Q Consensus 44 ~~~~~egw~~~~~~------~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~-~~~pir-~~~i~-~~~rv~d~g~~~~~~ 114 (766)
..+.+||||++=+. +...++| ++|||||++..|.|||.+....+ ...|++ .+.|+ .+|.|+-- ....
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~W-k~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~~v~~~-~d~~-- 81 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSW-DKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNAAIEIA-SDYT-- 81 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCC-EEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSCCCEEC-CSSS--
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCc-cEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCCEEEeC-CCCC--
Confidence 35669999998543 2233455 99999999999999997654332 122221 01222 12233210 0111
Q ss_pred ceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 115 GDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 115 ~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+.=+||+|-. ...+..-|.|.|.+|...|+++|+.||.
T Consensus 82 kr~~~F~l~t--~~~~~~lfqA~s~~e~~~Wi~ai~~~i~ 119 (122)
T 1dro_A 82 KKKHVLRVKL--ANGALFLLQAHDDTEMSQWVTSLKAQSD 119 (122)
T ss_dssp SSTTEEEEEC--SSSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEEE--cCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 1124666652 2356788999999999999999999987
No 62
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=98.35 E-value=2.7e-06 Score=78.59 Aligned_cols=105 Identities=12% Similarity=0.192 Sum_probs=66.5
Q ss_pred CCcceeeeEEEEE----cccccc-cccceeeeEEEecceeeeeccCCCCCCC--------CCcceeeeec-CceeEeecc
Q 004240 43 KGYFEYFGWVYHM----GTNSIG-HEYCHLRFLFIRGKYVEMYKRDPHENPG--------IKPIRRGVIG-PTLMVEELG 108 (766)
Q Consensus 43 ~~~~~~egw~~~~----~~~~~g-~~~~~~ry~vl~~~~~~~yk~~p~~~~~--------~~pir~~~i~-~~~rv~d~g 108 (766)
++++..||||++= +-.|.+ +++ ++|||||+|..|.|||......++ ..|. ++|+ .+|.|+-.-
T Consensus 5 ~~~v~keG~L~rK~~~~~gkk~~~r~W-~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~--~~i~L~~a~v~~~~ 81 (124)
T 3pp2_A 5 TKTLDKAGVLHRTKTADKGKRLRKKHW-SASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPE--YTVELRGATLSWAP 81 (124)
T ss_dssp ----CEEEEEEEEEEEETTEECSSCCC-EEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEE--EEEECTTCEEEECC
T ss_pred CCcEEEEEEEEEEEeccCCccCCCCCc-eEEEEEEECCEEEEEecCccccccCccCcccccCCc--ceEEcCCCEEEecc
Confidence 3567799999985 122345 466 899999999999999965433211 1344 3444 446665321
Q ss_pred ceeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 109 RRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 109 ~~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.....++ +||+|-.. ......|.|.|.+|+..|+.+|..||+
T Consensus 82 ~d~~krk--~vF~l~t~--~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 82 KDKSSRK--NVLELRSR--DGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp GGGCSSS--SEEEEECT--TSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred cccCCCc--eEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 1111122 46666532 245678999999999999999999986
No 63
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=98.28 E-value=3.3e-06 Score=91.43 Aligned_cols=98 Identities=13% Similarity=0.279 Sum_probs=70.6
Q ss_pred cceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEee
Q 004240 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (766)
Q Consensus 45 ~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn 124 (766)
.+.++|||+.-|.+ -..| ++|||||++..|.|||.... ..|.....+.++ .|+... ..+.=|+|.|+.
T Consensus 212 ~~~k~G~L~K~g~~--~k~W-kkRwFVL~~~~L~Yyk~~~~----~~p~G~I~L~~~-~v~~~~----~~~~~~~F~I~~ 279 (347)
T 2r09_A 212 NPDREGWLLKLGGR--VKTW-KRRWFILTDNCLYYFEYTTD----KEPRGIIPLENL-SIREVE----DPRKPNCFELYN 279 (347)
T ss_dssp CCCEEEEEEEECSS--SCCE-EEEEEEEETTEEEEESSTTC----SSCSEEEECTTC-EEEEEC----CSSCSSEEEEEC
T ss_pred ccccCCeeEecCCC--cccc-eeEEEEEcCCEEEEEcCCCc----cCCcEEEEcCCe-EEEEcc----CCCCCCEEEEEe
Confidence 35799999998764 2455 99999999999999996543 345445555444 354321 112236788886
Q ss_pred cCC-------------------cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 125 RLD-------------------ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 125 ~~~-------------------~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+.. ..+.+.|.|.|.+|...|+++|+.|+.
T Consensus 280 ~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~ 328 (347)
T 2r09_A 280 PSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 328 (347)
T ss_dssp SSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 632 246778999999999999999999987
No 64
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.27 E-value=2.8e-06 Score=93.31 Aligned_cols=99 Identities=13% Similarity=0.247 Sum_probs=70.5
Q ss_pred CcceeeeEEEEEcccc-cccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEee-ccceeeeCceEEEEE
Q 004240 44 GYFEYFGWVYHMGTNS-IGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEE-LGRRRFNHGDVYVMR 121 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~-~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d-~g~~~~~~~~~yv~~ 121 (766)
+.+.++||||.-..+. .+..| ++|||||++..|.|||+.....+...+|+...| +..+ ..|+ |.|.
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W-~rrwfvl~~~~l~y~~~~~~~~~~~~~l~~~~v----~~~~~~~r~-------~cF~ 366 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTW-ERLYFFTQGGNLMCQPRGAVAGGLIQDLDNCSV----MAVDCEDRR-------YCFQ 366 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEE-EEEEEEECSSCEECCCTTCSSCCCCBCSSCCEE----EEECCTTCS-------SEEE
T ss_pred CcceeeceeeeeccCCCCCCCc-eEEEEEEECCEEEEEeCCCCCCCeEEECCceEE----EECCCCCCC-------ceEE
Confidence 4567999999865543 35566 999999999999999976655544555543222 2222 2222 6788
Q ss_pred EeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 122 ~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
|..+. ..+.+.|.|.|.+|...||++|+.|+.+
T Consensus 367 i~~~~-~~~~~~l~A~s~~e~~~Wi~ai~~a~~~ 399 (407)
T 4h8s_A 367 ITTPN-GKSGIILQAESRKENEEWICAINNISRQ 399 (407)
T ss_dssp EECTT-SSCCEEEECSSSHHHHHHHHHHHHHHSC
T ss_pred EEecC-CCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 87542 2345899999999999999999999874
No 65
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=98.23 E-value=9.4e-07 Score=92.50 Aligned_cols=97 Identities=19% Similarity=0.323 Sum_probs=71.4
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecc-------eeeeeccCCCCCCC-CCcceeeeecCceeEeeccceeeeCc
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK-------YVEMYKRDPHENPG-IKPIRRGVIGPTLMVEELGRRRFNHG 115 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~-------~~~~yk~~p~~~~~-~~pir~~~i~~~~rv~d~g~~~~~~~ 115 (766)
+.+.++|||+.- ..| ++|||||++. .|.|||.+...... ..|.....+..++.|+... ..+
T Consensus 8 ~~v~k~G~L~K~------K~W-kkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~~~----~~~ 76 (264)
T 1qqg_A 8 SDVRKVGYLRKP------KSM-HKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINKRA----DSK 76 (264)
T ss_dssp -CEEEEEEEECT------TTC-CEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEEEC----CSS
T ss_pred CCccEEEEEEEC------CCC-EeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEecc----CCC
Confidence 466799999874 456 9999999999 99999966531101 3577777777777675332 122
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.=|+|.|+.+ .+...|+|.|.+|+..|+++|+.++.
T Consensus 77 ~~~~F~I~t~---~rty~l~A~se~e~~~Wi~aL~~~~~ 112 (264)
T 1qqg_A 77 NKHLVALYTR---DEHFAIAADSEAEQDSWYQALLQLHN 112 (264)
T ss_dssp CSSEEEEEES---SCEEEEECSSHHHHHHHHHHHHHHC-
T ss_pred CCcEEEEEEC---CEEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 2357778754 67889999999999999999999977
No 66
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=98.21 E-value=4.4e-06 Score=91.76 Aligned_cols=103 Identities=16% Similarity=0.181 Sum_probs=70.5
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCcee---EeeccceeeeC-ceEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLM---VEELGRRRFNH-GDVY 118 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~r---v~d~g~~~~~~-~~~y 118 (766)
...+.++|||+.-|.. +...| ++|||||.+..|.|||..... .|.....+...+- |.+.--....+ +-=|
T Consensus 266 ~~~~~k~G~L~K~g~~-~~k~W-KkRwFVL~~~~L~YYk~~~d~----~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~ 339 (386)
T 3lju_X 266 SRNYLKEGYMEKTGPK-QTEGF-RKRWFTMDDRRLMYFKDPLDA----FARGEVFIGSKESGYTVLHGFPPSTQGHHWPH 339 (386)
T ss_dssp SCCCSEEEEEEECCTT-SCSCC-EEEEEEEETTEEEEESSTTCS----BCSEEEECCCGGGTCEEEESCCTTCCSCCSCE
T ss_pred ccccceeeeEEEECCC-CCCCC-cccEEEEECCEEEEEecCCCc----ccceEEEeecceeeeeecccCCccccccCCCc
Confidence 3456799999997654 22455 999999999999999975433 3444444444332 22211111111 1137
Q ss_pred EEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 119 VMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 119 v~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.|.|..+ .+...|.|.|.+|+..|++||+.|+.
T Consensus 340 ~F~I~t~---~rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 340 GITIVTP---DRKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp EEEEECS---SCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 8888754 47889999999999999999999998
No 67
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=98.00 E-value=1.4e-05 Score=87.01 Aligned_cols=99 Identities=10% Similarity=0.158 Sum_probs=64.5
Q ss_pred CcceeeeEEEEEccccccc-ccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGH-EYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~-~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
+.+.++||||.-|.+.+.+ .| ++|||||+++.|.|||. +. ..|....-+..| .|...- . ...=|+|.|
T Consensus 276 ~~~~k~G~L~K~~~~~~~~~~W-kkRwfvL~~~~L~y~k~-~~----~~~~~~i~l~~~-~v~~~~--~--~~r~~~F~i 344 (385)
T 2q13_A 276 NLTRKAGYLNARNKTGLVSSTW-DRQFYFTQGGNLMSQAR-GD----VAGGLAMDIDNC-SVMAVD--C--EDRRYCFQI 344 (385)
T ss_dssp CCSCCEEEEEEC--------CC-EEEEEEEETTEEEEECS-SC----SSCEEEEECTTC-EEEEEC--C--TTCSSEEEE
T ss_pred CCccEEEEEEEecCCCCCcCCc-eeEEEEEECCEEEEecC-CC----cCCCceEEccce-EEEecc--c--cCCCceEEE
Confidence 4667999999987665333 56 99999999999999997 32 234433333343 332110 0 111267777
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..... .+.+.|.|.|.+|...|++||+.|++
T Consensus 345 ~t~~~-~~~~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 345 TSFDG-KKSSILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp ECTTS-CBCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred EeCCC-CeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 65432 26789999999999999999999987
No 68
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=97.94 E-value=2.3e-05 Score=85.99 Aligned_cols=103 Identities=15% Similarity=0.234 Sum_probs=64.5
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEe-cceeeeeccCCCCCC-CCCcceeeeecCceeEeeccceeeeCceEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIR-GKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~-~~~~~~yk~~p~~~~-~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~ 121 (766)
.++..||||.+-|.. + ..| ++|||||. ++.+.|||.+|...| +.+||...-+-.|..+...+.+ ...+.|.+
T Consensus 4 ~~v~keG~L~K~g~~-~-k~W-k~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~---~~~f~I~~ 77 (446)
T 4ejn_A 4 VAIVKEGWLHKRGEY-I-KTW-RPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQLMKTERPR---PNTFIIRC 77 (446)
T ss_dssp CCEEEEEEEEEEETT-T-TEE-EEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEEEEECSSS---TTEEEEEE
T ss_pred ceEEEEeeEEeeccc-c-ccc-cceEEEEeeCCEEEEEecCCCCCccCcccccCccccceeecCCCCCC---CceeEEEc
Confidence 357799999997532 2 344 99999997 789999999998765 6788877655544443332211 12333322
Q ss_pred EeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 122 ~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.=.+.. -.-++.+.+.||...|+.||+.|++
T Consensus 78 ~~~~~~--~~r~~~~~~~ee~e~W~~ai~~~i~ 108 (446)
T 4ejn_A 78 LQWTTV--IERTFHVETPEEREEWTTAIQTVAD 108 (446)
T ss_dssp EETTEE--EEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred CCCcee--eeeEEecCCHHHHHHHHHHHHhhhh
Confidence 211110 0116788999999999999999977
No 69
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.94 E-value=9.3e-06 Score=74.98 Aligned_cols=107 Identities=12% Similarity=0.204 Sum_probs=70.2
Q ss_pred eeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccce-eee---CceEEEEEE
Q 004240 47 EYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRR-RFN---HGDVYVMRL 122 (766)
Q Consensus 47 ~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~-~~~---~~~~yv~~~ 122 (766)
.|||||-.=....+....=++|||||.+..|.|||.++... ...|....-++....|+-..-. .+| ...=++|.|
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~~~-~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I 80 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQDKE-QSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQI 80 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHHHH-TTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEE
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCCcc-cCCceEEEECcccEEEEEcccccccccccccCCcEEEE
Confidence 58999986333334442349999999999999999865431 2456666666665555433211 011 111256766
Q ss_pred -eecC--CcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 -YNRL--DESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 -yn~~--~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|... ..+..+-|-|.|.||-.+|+.+|+.+|.
T Consensus 81 ~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 81 LYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp EECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred EeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 5332 2246789999999999999999998865
No 70
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.89 E-value=4e-05 Score=72.90 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=80.7
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
+.++.++|+=..+..++..--.+.|||||+++.|.|||++.... ..||=.+.+.+ |+|+.. .++ -+--|.|++-
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~~--~ePig~I~L~g-ceV~pd--~~~-~~~kf~ikl~ 80 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEAP--GDPIQQLNLKG-CEVVPD--VNV-SGQKFCIKLL 80 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTTT--SCCSCCBCTTT-CEEEEC--CBG-GGTBEEEEEE
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhcc--CCCceEEECCC-CEEecc--ccc-cCCceEEEEE
Confidence 45778999999999999987779999999999999999888654 46766665555 556644 222 2335666777
Q ss_pred ecC-CcCcceeeeccCHHHHHHHHHHHHHHH
Q 004240 124 NRL-DESKKGEIACATAGEARKWMEAFDQAK 153 (766)
Q Consensus 124 n~~-~~~~~~~~aa~~~eea~~W~~~~~~~~ 153 (766)
-+. +..+.+.|.|.|-|+-+.||.|++.|.
T Consensus 81 iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 81 VPSPEGMSEIYLRCQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp EECSSSEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEECCCHHHHHHHHHHHHHhc
Confidence 664 344779999999999999999999884
No 71
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.77 E-value=3.2e-05 Score=85.01 Aligned_cols=98 Identities=13% Similarity=0.159 Sum_probs=67.0
Q ss_pred ceeeeEEEEEcccccccccceeeeEEE--ecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE-
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFI--RGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL- 122 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl--~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~- 122 (766)
..+||||+.-|.. ..+| ++||||| +++.|.|||.+.. ..|...+.+.....+..- +. .| .-+.|.|
T Consensus 146 ~~keG~L~KrG~~--~k~W-krRwFVL~~~~~~L~Yy~~~~~----~~p~g~I~L~~~~~~~~~--~~-~~-~~~~f~I~ 214 (386)
T 3lju_X 146 GYREGFLWKRGRD--NGQF-LSRKFVLTEREGALKYFNRNDA----KEPKAVMKIEHLNATFQP--AK-IG-HPHGLQVT 214 (386)
T ss_dssp SEEEEEEEEECSS--SCCE-EEEEEEEETTTTEEEEEC---------CCSEEEEGGGEEEEECH--HH-HT-STTCEEEE
T ss_pred cccccceeeeccc--cCCc-eEEEEEEEcCCCEEEEECCCCc----cCcccEEEeeccEEEEcc--cc-cC-CCceEEEE
Confidence 4589999998765 4567 8899999 9999999997642 556667777665444421 00 01 1123333
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|-.....+.+-|.|.|.+|+..|+++|+.|..
T Consensus 215 ~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 215 YLKDNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp EEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 23345567889999999999999999998865
No 72
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.58 E-value=0.00058 Score=64.06 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=81.8
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecc------eeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGK------YVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDV 117 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~------~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~ 117 (766)
..++++||+|.-..-++|.-+ |+|||||-.. .|++|..+-..+.+..|=|-+-...|++|..-+-++--=+.-
T Consensus 10 e~~vk~G~L~~q~q~~fgkKW-rk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~ 88 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKW-RRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSPRDT 88 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBC-CEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSCSSC
T ss_pred CccccceEEEecccchhhhhh-heeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCCCcc
Confidence 566799999996666999986 9999999864 688898654444346777888899999999877662222344
Q ss_pred EEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHH
Q 004240 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAK 153 (766)
Q Consensus 118 yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~ 153 (766)
++|+|+-+ ++-.-|||.+ +|...||.+|.+.+
T Consensus 89 ~aF~l~T~---er~~~laAe~-~E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 89 SAFFLETK---ERLYLLAAPA-AERGDWVQAICLLA 120 (127)
T ss_dssp EEEEEEES---SCEEEEEECH-HHHHHHHHHHHHHH
T ss_pred eEEEEEeC---CcEEEEEeCc-HHHHHHHHHHHHHh
Confidence 99999854 4778999996 58999999998774
No 73
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.54 E-value=0.00022 Score=74.52 Aligned_cols=107 Identities=10% Similarity=0.071 Sum_probs=70.2
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeE--eeccceeeeCceEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMV--EELGRRRFNHGDVYVM 120 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv--~d~g~~~~~~~~~yv~ 120 (766)
.+.++.+||||.-+..+ ..| ++|||||++..|.|||+. .+.+ ..-|...+--.++-| --.+++.+.--.=|.|
T Consensus 129 s~~P~~~G~L~~ke~~~--K~W-kkRyfvLr~sgLy~~~k~-~sk~-~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F 203 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELGK--KSW-KKLYVCLRRSGLYCSTKG-TSAA-PRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGL 203 (256)
T ss_dssp TSCEEEEEEEEEECTTS--SCE-EEEEEEEETTEEEEESST-TCCC-GGGEEEEECCTTEEEEEESSTHHHHCCSSSEEE
T ss_pred CCCCcceeEEEEecCCC--Ccc-eEEEEEEeCCEEEEEecC-CCCc-cccceEEEEcCCCEEEEecccccccCCCCCCEE
Confidence 35678999999876543 466 999999999999777744 3331 111222222222222 2234555555556788
Q ss_pred EEeecCC---cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 121 ~~yn~~~---~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+|...+. ....--|.|.+.++...|+.||+.|+-
T Consensus 204 ~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 204 CIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp EEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 8875443 233468999999999999999999965
No 74
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=97.45 E-value=0.0003 Score=74.43 Aligned_cols=106 Identities=11% Similarity=0.144 Sum_probs=68.9
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEe--eccceeeeCceEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVE--ELGRRRFNHGDVYVMR 121 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~--d~g~~~~~~~~~yv~~ 121 (766)
+.++.+||||.-+..+ ..| ++|||||+++.|.||++.-...| .-+-..+.-.+|-|. ..+++.+.--.=|.|+
T Consensus 156 ~~pe~~G~L~~k~~~~--k~W-kkRyfvLr~sgLyy~~K~~sk~~--r~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ 230 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGK--KSW-KKRYFLLRASGIYYVPKGKAKVS--RDLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLV 230 (281)
T ss_dssp CCCCCEEEEEEECTTS--SCE-EEEEEEECSSCEEEC-----------CCEEEECGGGCEEEEESSHHHHTCCSCSCEEE
T ss_pred CCCccEEEEEEECCCC--CCC-eEEEEEEeCCEEEEEeCCCCCcc--ccceEEEEcCCcEEEEecccccccCCCCCcEEE
Confidence 4567999999876544 366 99999999999988886543221 122222233333333 2355555555678999
Q ss_pred EeecCC---cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 122 ~yn~~~---~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
|..... ....--|.|.|.++...|+.||+-|+-
T Consensus 231 ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 231 LKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp EECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 987542 233458999999999999999999865
No 75
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.39 E-value=0.00083 Score=63.14 Aligned_cols=110 Identities=14% Similarity=0.106 Sum_probs=66.3
Q ss_pred CCCCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCC-CCCcceeeeecCceeEe--------ecccee
Q 004240 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENP-GIKPIRRGVIGPTLMVE--------ELGRRR 111 (766)
Q Consensus 41 ~~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~-~~~pir~~~i~~~~rv~--------d~g~~~ 111 (766)
+..+++..||||+|+...-- -.+.+|++|++|.+.||+.+=...+ .++|+.-.+-=..+..- ++=-|+
T Consensus 3 ~~~s~vlkeGWmVH~t~~d~---~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi 79 (129)
T 2d9z_A 3 SGSSGMVKEGWMVHYTSRDN---LRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEI 79 (129)
T ss_dssp SCCTTSEEEEEEEEEESSCC---CCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEE
T ss_pred CCCCceeecceEEEEccCCc---cccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEE
Confidence 45577889999999986653 3588999999999999997633322 35555533211111111 022456
Q ss_pred eeCceEEEEEEeecCCcCcc-e-eeeccCHHHHHHHHHHHHHHHH
Q 004240 112 FNHGDVYVMRLYNRLDESKK-G-EIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 112 ~~~~~~yv~~~yn~~~~~~~-~-~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.-..++|...= |....... . -......+.|..|..||++|+.
T Consensus 80 ~T~~~~y~Vge-~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 80 ITDTMVYFVGE-NNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp ECSSCEEEECB-CCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcc-CCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 66777766431 22111100 0 0112237999999999999976
No 76
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.21 E-value=0.0015 Score=61.22 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=64.2
Q ss_pred CCCCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeec--------c----
Q 004240 41 KEKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--------G---- 108 (766)
Q Consensus 41 ~~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~--------g---- 108 (766)
+..+++..||||+|++..---+ +.||++|.+|.+.||+.+=. ..|.|.+....=+.|+.- |
T Consensus 3 ~~~s~vlkeGW~VH~t~~d~~r---KRHYWrLD~K~Itlf~~e~~----~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~h 75 (125)
T 2coa_A 3 SGSSGTLREGWVVHYSNKDTLR---KRHYWRLDCKCITLFQNNTT----NRYYKEIPLSEILTVESAQNFSLVPPGTNPH 75 (125)
T ss_dssp CCCCSCSEEEEEEECCSSSCCC---EEEEEEECSSEEEEESSSSC----SSCSEEEETTTCCEEEESCCCSSSCTTSCCE
T ss_pred CCCCceeecceEEEEccCCccc---cceeeEecCCeEEEEecCCC----CceeeeeehhHeecccccccccccCCCCCCc
Confidence 4457788999999998765544 78999999999999997632 344444444433344332 1
Q ss_pred -ceeeeCceEEEEEEeecCC-cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 109 -RRRFNHGDVYVMRLYNRLD-ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 109 -~~~~~~~~~yv~~~yn~~~-~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
-|+.-..+.|...= |... ..++= |.. .+.|..|..||++|+.
T Consensus 76 cFEi~T~~~~yyVg~-~~~~~p~~~s--g~g-~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 76 CFEIVTANATYFVGE-MPGGTPGGPS--GQG-AEAARGWETAIRQALM 119 (125)
T ss_dssp EEEEECSSCCCCEEC-CSCCCSSSCC--CCC-SHHHHHHHHHHHHHGG
T ss_pred eEEEEeCCeEEEEcc-CCCCCCCCcC--ccc-cHHHHHHHHHHHhhcc
Confidence 24555555554331 1111 11111 222 4899999999999965
No 77
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=97.13 E-value=0.00056 Score=72.27 Aligned_cols=108 Identities=14% Similarity=0.157 Sum_probs=65.0
Q ss_pred CCCCcceeeeEEEEE-----ccc-cc---ccccceeeeEEEecceeeeeccCCCCCCC--CCcceeeeecCceeEeeccc
Q 004240 41 KEKGYFEYFGWVYHM-----GTN-SI---GHEYCHLRFLFIRGKYVEMYKRDPHENPG--IKPIRRGVIGPTLMVEELGR 109 (766)
Q Consensus 41 ~~~~~~~~egw~~~~-----~~~-~~---g~~~~~~ry~vl~~~~~~~yk~~p~~~~~--~~pir~~~i~~~~rv~d~g~ 109 (766)
...+.+.++|||++= +.+ |. |...=++|||||+|..|.|||.+-..... ..|.....|.+++-....
T Consensus 6 ~~~~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~~a~-- 83 (279)
T 3a8n_A 6 AAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQAVP-- 83 (279)
T ss_dssp ----CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEECCCT--
T ss_pred ccCCceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEEecc--
Confidence 344677899999862 222 22 44445999999999999999976532111 123333334333322111
Q ss_pred eeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+ ...+. +||+|=+. ..+.+-|.|.|.+|+..|+.+|..|+.
T Consensus 84 d-~~kKk-~vF~L~t~--~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 84 E-HPKKD-FVFCLSNS--LGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp T-SSSSC-SCCCEEET--TTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred c-cCCCC-cEEEEEcC--CCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 1 11111 46777554 456688999999999999999999987
No 78
>3tl1_A WHIE ORF VI, polyketide cyclase; helix-GRIP fold, polyketide C9-C14 aromatase/cyclase, linear beta-ketone intermediate; HET: JRO; 1.80A {Streptomyces coelicolor} PDB: 3tvr_A 2kf2_A
Probab=96.71 E-value=0.043 Score=52.78 Aligned_cols=143 Identities=12% Similarity=0.030 Sum_probs=89.5
Q ss_pred EEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccCCe
Q 004240 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 340 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~dGs 340 (766)
+.....|++||++||++|.|... -++|-+.+..+++++. +++...+...+.... ++ ..+.|+..+.+ +.++.
T Consensus 5 v~~si~I~a~~~~V~~lV~Dve~--yP~~~p~~~~~~vl~~-~~~~~~~rl~~~~~~--~G-~~~~~ts~~~~--d~~~~ 76 (159)
T 3tl1_A 5 TDNEITIAAPMELVWNMTNDIEK--WPGLFSEYASVEVLGR-DDDKVTFRLTMHPDA--DG-KVWSWVSERVA--DPVTR 76 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGG--HHHHCSSEEEEEEEEE-CSSEEEEEEEECCCT--TS-CCCEEEEEEEE--ETTTT
T ss_pred eEEEEEecCCHHHHHHHHHhHHH--hhhhhhCceEEEEEec-CCCEEEEEEEEEecc--Cc-eEEEEEEEEEE--cCCCC
Confidence 45667899999999999999976 7799999999999988 455455553322221 12 24567665544 22221
Q ss_pred EEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHHHHH
Q 004240 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 420 (766)
Q Consensus 341 YVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~ 420 (766)
.|..+.+.- . | ++ .+-+.|.++|++. .|+|++......++-. |.-...+...+--.+-..
T Consensus 77 -~I~~~~~~~-g-P-----f~--~l~g~W~f~p~~~-------gt~V~~~~df~~~~~~---p~~~~~~~~~~~~~~~~~ 136 (159)
T 3tl1_A 77 -TVRAQRVET-G-P-----FQ--YMNIVWEYAETAE-------GTVMRWTQDFAMKPDA---PVDDAWMTDNINRNSRTQ 136 (159)
T ss_dssp -EEEEEESSC-T-T-----EE--EEEEEEEEEEETT-------EEEEEEEEEEEECTTC---SSCHHHHHHHHHHHHHHH
T ss_pred -EEEEEEccC-C-C-----hh--hccCEEEEEECCC-------CEEEEEEEEEEecCCC---CCCHHHHHHHHHhhHHHH
Confidence 233333321 1 2 22 3457899999863 5999999999988766 321111223333344456
Q ss_pred HHHHHHHhhcC
Q 004240 421 VAGLKEYIGAN 431 (766)
Q Consensus 421 Va~LRe~~~a~ 431 (766)
+++||+.+++.
T Consensus 137 L~~lK~~~E~~ 147 (159)
T 3tl1_A 137 MALIRDRIEQA 147 (159)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 78888877653
No 79
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=96.67 E-value=0.014 Score=57.10 Aligned_cols=106 Identities=9% Similarity=0.157 Sum_probs=78.4
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
...++..+|+=..+..|+.+.=.+.||||+++..|.|||.+=... ..|+-+..+-+|-.+-|. .+.++. |.+++
T Consensus 44 t~iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~~--geP~~~I~LrGCEVtpDV---nva~~K-f~IkL 117 (173)
T 4f7h_A 44 TSIPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEESS--GTPAHQMNLRGCEVTPDV---NISGQK-FNIKL 117 (173)
T ss_dssp GGTTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGCS--SCCSEEEECTTCEEEEEE---ETTTTE-EEEEE
T ss_pred hcChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHhc--CCCceEEecCceEEeccc---cccccc-eeEEE
Confidence 345668899988899999999999999999999999999877665 678777766665544332 111111 33444
Q ss_pred eecCC-cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLD-ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~-~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..+.. ..+-+-|.|.|-++=++||.|.+.|..
T Consensus 118 ~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAsk 150 (173)
T 4f7h_A 118 LIPVAEGMNEIWLRCDNEKQYAHWMAACRLASK 150 (173)
T ss_dssp EEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred eccCCCCcceeeeecCCHHHHHHHHHHhhhhcc
Confidence 44433 455677899999999999999999943
No 80
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=96.59 E-value=0.017 Score=56.21 Aligned_cols=106 Identities=12% Similarity=0.227 Sum_probs=73.1
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
...++..+|+=..+..|+.+.=.+.||||+++..|.|||.+=... ..|+-+.-+-+|--+-|. ..-+.=|.+++
T Consensus 23 t~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~~--geP~~~inLrGCEVtPDV----nva~~Kf~ikL 96 (165)
T 4bbk_A 23 TDIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELEQ--GEPIEKLNLRGCEIVPDV----NVSGRKFGIKL 96 (165)
T ss_dssp ---CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGTT--SCCSEEEECTTCEEEEEE----ETTTTEEEEEE
T ss_pred ccChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHhc--CCCceEEecCccEEeccc----ccccceeeEEE
Confidence 456678999988899999999999999999999999999877666 789988888875444331 11112255666
Q ss_pred eecCC-cCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLD-ESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~-~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..+.. -..-+-|.|.|-++=++||-|.+.|..
T Consensus 97 ~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 97 LIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp EEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 66644 334667999999999999999999943
No 81
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=96.36 E-value=0.19 Score=44.54 Aligned_cols=140 Identities=16% Similarity=0.040 Sum_probs=78.7
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG 339 (766)
.+.....|++|+++||++|.|... .++|.+.+.++++++.-++. ...+..+.. + +.. ..|. .+.. ..+.+
T Consensus 3 ~~~~~~~i~ap~~~V~~~l~d~~~--~~~w~p~~~~~~~~~~~~~g-~~~~~~~~~---~-g~~-~~~~-~~~~-~~~~~ 72 (147)
T 2d4r_A 3 EVRAERYIPAPPERVYRLAKDLEG--LKPYLKEVESLEVVAREGAR-TRSRWVAVA---M-GKK-VRWL-EEEE-WDDEN 72 (147)
T ss_dssp EEEEEEEESSCHHHHHHHHHCHHH--HGGGCTTEEEEEEEEEETTE-EEEEEEEEE---T-TEE-EEEE-EEEE-EETTT
T ss_pred eEEEEEEeCCCHHHHHHHHhChhh--hhhhcccccEEEEEEeCCCc-cEEEEEEEe---C-Cce-EEEE-EEEE-EcCCC
Confidence 467788999999999999999865 77999988888887765433 333333331 2 111 1121 1111 12223
Q ss_pred eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCC-cccch-hhhHHHH
Q 004240 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNS-STKFE-KTTHFAL 417 (766)
Q Consensus 340 sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~-~s~~~-~~i~~~m 417 (766)
.. |....+.-| . + ...+-|.++|.++ . |+|++..+.+++|.+ +.. ...+. ..+-..+
T Consensus 73 ~~-i~~~~~~g~---~-----~--~~~~~~~~~~~~~------g-T~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 131 (147)
T 2d4r_A 73 LR-NRFFSPEGD---F-----D--RYEGTWVFLPEGE------G-TRVVLTLTYELTIPI---FGGLLRKLVQKLMQENV 131 (147)
T ss_dssp TE-EEEEEEEES---C-----S--EEEEEEEEEECSS------S-EEEEEEEEEECCCTT---TTTTTHHHHHHHHHHHH
T ss_pred cE-EEEEeccCC---h-----h--heEEEEEEEECCC------C-cEEEEEEEEecCCcc---HHHHHHHHHHHHHHHHH
Confidence 22 222333211 1 1 1234688898763 3 999999999999865 321 12111 1111223
Q ss_pred HHHHHHHHHHhhc
Q 004240 418 LSQVAGLKEYIGA 430 (766)
Q Consensus 418 L~~Va~LRe~~~a 430 (766)
-..+++|++..++
T Consensus 132 ~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 132 ESLLKGLEERVLA 144 (147)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3456667666654
No 82
>3tfz_A Cyclase; helix-GRIP, BET V1-like superfamily, biosynthetic protein; HET: CXS; 2.39A {Streptomyces SP}
Probab=96.35 E-value=0.12 Score=49.67 Aligned_cols=148 Identities=13% Similarity=0.043 Sum_probs=86.9
Q ss_pred ceEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 258 GVLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 258 ~~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
...+.....|++||++||++|.|.+. -++|-+.+.++++++.-++. ..+...... .+. .+-|...+. .+.
T Consensus 4 M~~v~~si~I~ap~~~V~~~v~D~~~--~p~~~P~~~~~~v~~~~~~~-~~~~~~~~~----~G~-~~~~~s~~~--~~~ 73 (172)
T 3tfz_A 4 MRHVEHTVTVAAPADLVWEVLADVLG--YADIFPPTEKVEILEEGQGY-QVVRLHVDV----AGE-INTWTSRRD--LDP 73 (172)
T ss_dssp CEEEEEEEEESSCHHHHHHHHHCGGG--HHHHCSSEEEEEEEEEETTE-EEEEEEEEE----TTE-EEEEEEEEE--EET
T ss_pred CcEEEEEEEeCCCHHHHHHHHHhHHH--HHhhCcccceEEEEecCCCE-EEEEEEEec----CCE-EEEEEEEEE--EeC
Confidence 35677788999999999999999976 78999999999999875433 333333321 111 122333222 223
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCcc--ccccCCcc-c-----c
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC--RWKKNSST-K-----F 409 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi--~w~p~~~s-~-----~ 409 (766)
.+ -.|..++++.+ |-.+ .+.+-|.++|.++ .+|+|++.+..++++-. ..+-.... . +
T Consensus 74 ~~-~~i~~~~~~~~------gpf~--~~~g~w~f~~~~~------~~t~V~~~~~~~~~~~~l~~~lg~~~~~~~~~~~~ 138 (172)
T 3tfz_A 74 AR-RVIAYRQLETA------PIVG--HMSGEWRAFTLDA------ERTQLVLTHDFVTRAAGDDGLVAGKLTPDEAREML 138 (172)
T ss_dssp TT-TEEEEEEEECC------TTEE--EEEEEEEEEEEET------TEEEEEEEEEEEECCCCTTSSBTTTBCHHHHHHHH
T ss_pred CC-CEEEEEEeeCC------CChh--hcEEEEEEEECCC------CcEEEEEEEEEEEcChhHHHhhccccCchhhHHHH
Confidence 22 23444555321 2222 2345788999864 58999999999877543 11100000 0 1
Q ss_pred hhhhHHHHHHHHHHHHHHhhc
Q 004240 410 EKTTHFALLSQVAGLKEYIGA 430 (766)
Q Consensus 410 ~~~i~~~mL~~Va~LRe~~~a 430 (766)
...+--.+...+++||++.++
T Consensus 139 ~~~l~~~~~~~L~~lk~~aE~ 159 (172)
T 3tfz_A 139 EAVVERNSVADLNAVLGEAER 159 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcccHHHHHHHHHHHHH
Confidence 122222334578888888765
No 83
>1t17_A Conserved hypothetical protein; beta-alpha-beta-BETA-beta-BETA-beta-BETA-helix, structural G protein structure initiative, PSI, NESG; NMR {Caulobacter crescentus} SCOP: d.129.3.6
Probab=96.32 E-value=0.083 Score=48.89 Aligned_cols=114 Identities=11% Similarity=0.027 Sum_probs=78.1
Q ss_pred eEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecC---ceEEEEEEeccCcCCCCCCCCeEEEEEEEEE
Q 004240 259 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDG---HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR 335 (766)
Q Consensus 259 ~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~---~tDIvY~~~kp~~lP~~vspRDFV~LRswRr 335 (766)
+.+.....|++||++||+++.|.+. .++|-+.+.+.++++.-++ +......... + +++ .+.|..-..+
T Consensus 2 ~~~~~s~~i~ap~~~v~~~v~D~~~--~p~~~p~~~~~~v~~~~~~~g~~~~~~~~~~~--~--~~~-~~~~~~~v~~-- 72 (148)
T 1t17_A 2 HRHVVTKVLPYTPDQLFELVGDVDA--YPKFVPWITGMRTWNGRVDGAVSTVDAEAQVG--F--SFL-REKFATRVRR-- 72 (148)
T ss_dssp CEEEEEEEESSCTHHHHHHHTTTTC--CSSCCSSCCCCCEEEEEEETTEEEEEEEEECS--T--TSS-CCEEEEEEEE--
T ss_pred CEEEEEEEecCCHHHHHHHHHHHhh--HHhhCCCcCeeEEEEecCCCCCceEEEEEEEE--e--cce-eEEEEEEEEE--
Confidence 3567888999999999999999976 8899999999999987652 2223333222 1 122 3446543332
Q ss_pred ccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCcc
Q 004240 336 GQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (766)
Q Consensus 336 ~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi 399 (766)
..+ .+.|..+++.-| -+. +-+.|.++|.++ . |+|++.+..+++|.+
T Consensus 73 ~~~-~~~i~~~~~~G~----f~~------~~g~w~f~~~~~------g-t~v~~~~~~~~~~~l 118 (148)
T 1t17_A 73 DKD-ARSIDVSLLYGP----FKR------LNNGWRFMPEGD------A-TRVEFVIEFAFKSAL 118 (148)
T ss_dssp ETT-TCEEEEEESSTT----SSC------EEEEEEEEEETT------E-EEEEEEEEECCSCHH
T ss_pred cCC-CcEEEEEECCCC----hhc------cEEEEEEEECCC------C-eEEEEEEEEEECcHH
Confidence 222 356777776531 111 356899999874 3 999999999999876
No 84
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=96.31 E-value=0.073 Score=51.73 Aligned_cols=143 Identities=12% Similarity=0.042 Sum_probs=85.1
Q ss_pred EEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccCCe
Q 004240 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDGT 340 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~dGs 340 (766)
+.....|++||++||++|.|... -++|.+.+..+++++.-+ +...+...+.+.. ++ ..+.|...+.. +.++
T Consensus 5 v~~si~I~a~~~~v~~lv~Dv~~--~p~w~p~~~~~~~~~~~~-~~~~~~l~~~~~~--~G-~~~~~ts~~~~--d~~~- 75 (169)
T 3tvq_A 5 TDNSIVVNAPFELVWDVTNDIEA--WPELFSEYAEAEILRQDG-DGFDFRLKTRPDA--NG-RVWEWVSHRVP--DKGS- 75 (169)
T ss_dssp EEEEEEESSCHHHHHHHHTCGGG--HHHHCTTEEEEEEEEEET-TEEEEEEEECCCT--TS-CCCEEEEEEEE--EGGG-
T ss_pred EEEEEEecCCHHHHHHHHHhhhH--HHHHHhheeEEEEEecCC-CEEEEEEEEEecC--CC-eEEEEEEEEEE--cCCC-
Confidence 45667899999999999999876 779999999999998843 3222222111211 12 24456544432 2222
Q ss_pred EEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHHHHH
Q 004240 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLSQ 420 (766)
Q Consensus 341 YVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~~ 420 (766)
-.|..+.+.-. | ++ .+-+.|.++|++. + |+|++....+.++-. |.-...+...+-..+-..
T Consensus 76 ~~I~~~~l~~g---P----f~--~~~g~W~f~p~~~------g-t~V~~~~df~~~~~~---p~~~~~~~~av~~~~~~~ 136 (169)
T 3tvq_A 76 RTVRAHRVETG---P----FA--YMNLHWTYRAVAG------G-TEMRWVQEFDMKPGA---PFDNAHMTAHLNTTTRAN 136 (169)
T ss_dssp TEEEEEESSCT---T----EE--EEEEEEEEEEETT------E-EEEEEEEEEEECTTC---SSCHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcCCC---C----hh--heeeEEEEEECCC------C-EEEEEEEEEEecCCC---cccHHHHHHHHHhhHHHH
Confidence 22333333221 2 22 3456899999874 3 999999999887654 211111222233333456
Q ss_pred HHHHHHHhhcC
Q 004240 421 VAGLKEYIGAN 431 (766)
Q Consensus 421 Va~LRe~~~a~ 431 (766)
+++||+.++..
T Consensus 137 L~~LK~~aE~~ 147 (169)
T 3tvq_A 137 MERIKKIIEDR 147 (169)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhh
Confidence 77888777653
No 85
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=95.68 E-value=0.24 Score=46.24 Aligned_cols=143 Identities=8% Similarity=-0.045 Sum_probs=80.0
Q ss_pred EEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEE-EEEEEEccCC
Q 004240 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVF-SRQWFRGQDG 339 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~-LRswRr~~dG 339 (766)
+..+..|++||++||++|.|.+. ..+|.+.+.+ ++.+++..-..-...+ . +.+ ..+|.. .+....+...
T Consensus 5 i~~~~~i~ap~e~Vw~~l~D~e~--~~~w~p~~~~---~~~~~~~~~~~~~~~~--~--g~~-~~~~~~~~~~~~~~~~~ 74 (162)
T 2pcs_A 5 GNGSIELKGTVEEVWSKLMDPSI--LSKCIMGCKS---LELIGEDKYKADLQIG--I--AAV-KGKYDAIIEVTDIKPPY 74 (162)
T ss_dssp EEEEEEEESCHHHHHHHHTCHHH--HHHHSTTEEE---EEEEETTEEEEEEEEC--C--GGG-CEEEEEEEEEEEEETTT
T ss_pred EeeEEEecCCHHHHHHHhcCHHH--HHhhCCCceE---eEEeCCCeEEEEEEEE--e--eeE-EEEEEEEEEEEecCCCc
Confidence 55667899999999999999865 6789876544 4444444321111122 1 112 123432 2222334444
Q ss_pred eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHH-H
Q 004240 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL-L 418 (766)
Q Consensus 340 sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~m-L 418 (766)
.+.+......- ++.+++ .+-|.++|+.+ .+|+|+|-...+++|.+. .....+.....-++ -
T Consensus 75 ~~~~~~~~~~~------~~~~~~---~~~~~l~~~~~------~gT~v~~~~~~~~~g~l~---~~~~~l~~~~~~~~~~ 136 (162)
T 2pcs_A 75 HYKLLVNGEGG------PGFVNA---EGVIDLTPIND------ECTQLTYTYSAEVGGKVA---AIGQRMLGGVAKLLIS 136 (162)
T ss_dssp EEEEEEEEEET------TEEEEE---EEEEEEEESSS------SEEEEEEEEEEEEESGGG---GGCHHHHHHHHHHHHH
T ss_pred EEEEEEEecCC------CccEEE---EEEEEEEecCC------CcEEEEEEEEEEECCCHH---HhhHHHHHHHHHHHHH
Confidence 55544433211 233433 35688888653 479999999999999872 21122222222232 3
Q ss_pred HHHHHHHHHhhcC
Q 004240 419 SQVAGLKEYIGAN 431 (766)
Q Consensus 419 ~~Va~LRe~~~a~ 431 (766)
..+.+|++.+++.
T Consensus 137 ~~~~~lk~~~e~~ 149 (162)
T 2pcs_A 137 DFFKKIQKEIAKS 149 (162)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccc
Confidence 5667788777764
No 86
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=95.26 E-value=0.74 Score=43.61 Aligned_cols=113 Identities=9% Similarity=0.013 Sum_probs=71.2
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEe-ccCcCCCCCC-CCeEEEEEEEEEcc
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTY-DPKYLTRWQS-KRDFVFSRQWFRGQ 337 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~-kp~~lP~~vs-pRDFV~LRswRr~~ 337 (766)
.+.....|++||++||++|.|.. + |-..+.+....+..+++ ...... +-.. +... ..-|..-..+. .
T Consensus 8 ~v~~s~~I~ap~e~v~~lv~Dve---~--w~~~yp~~~p~~~~~~~--~~~~~~a~l~v--g~~~~~~~~~s~~~~~--~ 76 (161)
T 3p9v_A 8 ELNRDLEIPASYDEVFDLLADVP---K--SASHFPKVDKLVDLGNN--AYRWEMEKVGV--DKHAIQSVYACTYHAD--K 76 (161)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHH---H--HHTTSTTEEEEEEEETT--EEEEEECCBSS--GGGCBCCEEEEEEEEE--T
T ss_pred EEEEEEEEcCCHHHHHHHHhChh---h--hHhhCCCeEEEEEcCCC--ceEEEEEEEee--eeEEEEEEEEEEEEEc--C
Confidence 34556789999999999999873 3 88889999888888776 222223 2111 1222 23455433332 2
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCcc
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi 399 (766)
++. .|..+++..| -. ..+-+.|.++|.++ ++|+|++.+..++++.+
T Consensus 77 ~~~-~I~~~~~~g~---~~------~~l~g~w~f~p~~~------g~t~V~~~~~~e~~~pl 122 (161)
T 3p9v_A 77 EAG-KITWSPIKGE---GN------GVVSGSWTLSAKGD------NATAVKFQTSAELTVPL 122 (161)
T ss_dssp TTT-EEEEEECTTS---TT------EEEEEEEEEEESSS------SCEEEEEEEEEEEEECS
T ss_pred CCC-EEEEEEecCc---cc------eeEEEEEEEEECCC------CeEEEEEEEEEEEcCcc
Confidence 222 3455555322 11 12346899999875 47999999999999666
No 87
>3ggn_A Uncharacterized protein DR_A0006; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Deinococcus radiodurans R1} PDB: 2kcz_A
Probab=95.24 E-value=0.31 Score=45.72 Aligned_cols=143 Identities=11% Similarity=-0.019 Sum_probs=77.8
Q ss_pred eEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccC
Q 004240 259 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (766)
Q Consensus 259 ~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~d 338 (766)
..+.....|++|+++||+++.|... -++|.+.+.+++++ ++. ......+. +.+.....|. .+.....+
T Consensus 4 ~~v~~s~~I~ap~e~V~~~~~D~e~--~p~w~p~~~~v~~~---~~~--~~~~~~~~---~~G~~~~~~~-~~v~e~~p- 71 (155)
T 3ggn_A 4 TVVRDAVTIGKPAEQLYAVWRDLPG--LPLLMTHLRSVEVL---DDK--RSRWTVEA---PAPLGTVSWE-AELTADEP- 71 (155)
T ss_dssp CEEEEEEEESSCHHHHHHHHHCGGG--HHHHSTTCCEEEEC---SSS--EEEEEEEC---CTTTCEEEEE-EEEEEEET-
T ss_pred cEEEEEEEEcCCHHHHHHHHhCHHH--hHHHhhhceEEEEe---cCC--eeEEEEEe---cCCcceEEEE-EEEEEecC-
Confidence 3567788899999999999999976 88999987766664 433 23333332 2111223332 22222222
Q ss_pred CeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCC-ccccccCCcccchhhhHHHH
Q 004240 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSG-WCRWKKNSSTKFEKTTHFAL 417 (766)
Q Consensus 339 GsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KG-wi~w~p~~~s~~~~~i~~~m 417 (766)
+.. |..+++.-|. . -..+.|.++|.++ ..+|+|++.+..++.| .+. .....+...+.-++
T Consensus 72 ~~~-i~~~~~~g~~---~-------~~~g~~~F~~~~~-----~~gT~V~~~~~~~~~~~~l~---~~~~~~~~~~~~~~ 132 (155)
T 3ggn_A 72 GKR-IAWRSLPGAR---I-------ENSGEVLFRPAPG-----ARGTEVVVRLTYRPPGGSAG---AVIARMFNQEPSQQ 132 (155)
T ss_dssp TTE-EEEEECTTCS---S-------CEEEEEEEEECSS-----SSCEEEEEEEEEC-------------------CHHHH
T ss_pred CCE-EEEEECCCCC---c-------ceEEEEEEEECCC-----CCceEEEEEEEEECCCcHHH---HHHHHHhhhhHHHH
Confidence 323 4556665431 1 1234678888842 1479999999999876 441 11122222223333
Q ss_pred -HHHHHHHHHHhhcCC
Q 004240 418 -LSQVAGLKEYIGANP 432 (766)
Q Consensus 418 -L~~Va~LRe~~~a~~ 432 (766)
-..+.+|++++++--
T Consensus 133 v~~~l~r~k~~~e~~~ 148 (155)
T 3ggn_A 133 LRDDLMRFKREQELGL 148 (155)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhh
Confidence 356888888887643
No 88
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=95.07 E-value=0.12 Score=49.26 Aligned_cols=106 Identities=10% Similarity=0.072 Sum_probs=68.1
Q ss_pred ceeeeEEEEE-cccccccccceeeeEEEecceeeeeccCC---CCCCCCCcceeeeecCceeEeeccceeeeCceEEEEE
Q 004240 46 FEYFGWVYHM-GTNSIGHEYCHLRFLFIRGKYVEMYKRDP---HENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMR 121 (766)
Q Consensus 46 ~~~egw~~~~-~~~~~g~~~~~~ry~vl~~~~~~~yk~~p---~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~ 121 (766)
...-+=+|.+ ..||.=+.=-|.|||+|=+..|=|=|--| ... .-=+|.-+=-.+..|..-. +...-|-|+
T Consensus 13 lvc~~~l~ev~d~~K~~~kg~qqR~~FLFND~LL~TK~~~kkk~~~--~Y~vr~~~~L~gm~V~~~e----~e~~p~~~~ 86 (140)
T 3qwm_A 13 LVCYCRLFEVPDPNKPQKLGLHQREIFLFNDLLVVTKIFQKKKNSV--TYSFRQSFSLYGMQVLLFE----NQYYPNGIR 86 (140)
T ss_dssp EEEEEEEEECSCTTSCCCTTTTEEEEEEESSCEEEEECCC---CCC--CCCCEEEECCTTEEEEEEC----CSSCTTEEE
T ss_pred EEEEEeeeeeccCcccccccccceEEEEecchhhheeecccCCCCC--ceEEEEEeeecceEEEccc----CCCCceEEE
Confidence 3344556665 45666665568999999998887765222 121 2222222222333444322 223567899
Q ss_pred EeecCC---cCcceeeeccCHHHHHHHHHHHHHHHHHHH
Q 004240 122 LYNRLD---ESKKGEIACATAGEARKWMEAFDQAKQQAE 157 (766)
Q Consensus 122 ~yn~~~---~~~~~~~aa~~~eea~~W~~~~~~~~~~~~ 157 (766)
|++..+ +..-+.++|.|.+|-.+|+++|++||+..+
T Consensus 87 l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~ 125 (140)
T 3qwm_A 87 LTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQ 125 (140)
T ss_dssp EEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHH
Confidence 998763 234489999999999999999999999443
No 89
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=95.01 E-value=1.1 Score=41.10 Aligned_cols=140 Identities=9% Similarity=-0.039 Sum_probs=73.7
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEE-EEEEEEccC
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVF-SRQWFRGQD 338 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~-LRswRr~~d 338 (766)
.+..+..|++||++||++|.|.+. -.+|.+.+ ..++ ++++.-.+....+. +..+ ..|-. ++....++.
T Consensus 14 ~i~~~~~i~ap~e~Vw~~l~D~~~--~~~w~p~~---~~~~-~~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~~ 82 (157)
T 2ns9_A 14 RYEGSFEVSKTPEEVFEFLTDPKR--FSRAFPGF---KSVE-VEDGSFTIELRLSL----GPLR-GDARVRASFEDLEKP 82 (157)
T ss_dssp EEEEEEEESSCHHHHHHHHTCHHH--HGGGSTTE---EEEE-EETTEEEEEEEEES----SSSE-EEEEEEEEEEEEETT
T ss_pred EEeeEEEEcCCHHHHHHHHcCHHH--HHhhCCCc---eEEE-ECCCEEEEEEEEEE----ccee-EEEEEEEEEEecCCC
Confidence 356667899999999999999865 67898764 4444 55553222212211 1121 12321 122122333
Q ss_pred CeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHH-
Q 004240 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL- 417 (766)
Q Consensus 339 GsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~m- 417 (766)
..+.+....... .+-+. ...-|.++|.+ ++|+|++-.+++++|.+ ......+.....-++
T Consensus 83 ~~i~~~~~~~~~------~~~~~---~~~~~~l~~~~-------~gT~v~~~~~~~~~g~l---~~~~~~~~~~~~~~~~ 143 (157)
T 2ns9_A 83 SKATVKGSGRGA------GSTLD---FTLRFAVEPSG-------GGSRVSWVFEGNVGGLA---ASMGGRVLDSLARRMI 143 (157)
T ss_dssp TEEEEEEEEECS------SEEEE---EEEEEEEEEET-------TEEEEEEEEEEEEEEGG---GGSCHHHHHHHHHHHH
T ss_pred cEEEEEEEecCC------CccEE---EEEEEEEEeCC-------CcEEEEEEEEEEECcCH---HHhhHHHHHHHHHHHH
Confidence 334332221110 01122 23568888865 37999999999999877 222222222222222
Q ss_pred HHHHHHHHHHhh
Q 004240 418 LSQVAGLKEYIG 429 (766)
Q Consensus 418 L~~Va~LRe~~~ 429 (766)
-..+.+|++.++
T Consensus 144 ~~~~~~lk~~~e 155 (157)
T 2ns9_A 144 NDVISGVKRELG 155 (157)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 245566766664
No 90
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=94.84 E-value=0.7 Score=43.40 Aligned_cols=137 Identities=11% Similarity=-0.018 Sum_probs=80.2
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG 339 (766)
.+..+..|+|||++||++|.|... -++|.+.+.++++++ ++. |-...+.. + . .+.-|-...+++.
T Consensus 3 ~v~~si~I~Ap~~~VW~~l~d~~~--~~~w~p~v~~~~~~~--GG~--vR~~~~~~----G-~----~~~Erl~~~D~~~ 67 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGFNS--LPDWLPYIPSSKLTE--GGR--VRHLANPD----G-E----TIIERLEVFNDKE 67 (146)
T ss_dssp EEEEEEEESSCHHHHHHHHCSTTC--HHHHCTTCCEEEEEG--GGT--EEEEECTT----S-C----EEEEEEEEEETTT
T ss_pred EEEEEEEEeCCHHHHHHHHhcccc--HHHhCCCeEEEEEeC--CCe--EEEEEeCC----C-C----EEEEEEEEEeCCC
Confidence 356778899999999999999866 578999999998875 232 32222221 1 1 2222222223322
Q ss_pred eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHHHH
Q 004240 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLS 419 (766)
Q Consensus 340 sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~ 419 (766)
..+.++=++- ..| + ....+-|-+.|... +++|.|+|....++.|... . .+...+-..+-.
T Consensus 68 -~~~~y~iv~g-~~~-----~--~~~~~~~~v~p~~~-----~~gt~v~w~~~~~p~g~~~---~---~~~~~~~~~~~~ 127 (146)
T 3f08_A 68 -RYYTYSIMNA-PFP-----V--TNYLSTIQVKEGTE-----SNTSLVEWSGTFTPVAVSD---E---EAINLVHGIYSD 127 (146)
T ss_dssp -TEEEEEEEEC-SSS-----E--EEEEEEEEEEECSS-----TTCEEEEEEEEEEESSSCH---H---HHHHHHHHHHHH
T ss_pred -CEEEEEEecC-CCc-----e--eEEEEEEEEEEecC-----CCcEEEEEEEEEEeCCCCH---H---HHHHHHHHHHHH
Confidence 2233222221 122 2 34556788888422 2579999999999977662 1 112222233346
Q ss_pred HHHHHHHHhhcC
Q 004240 420 QVAGLKEYIGAN 431 (766)
Q Consensus 420 ~Va~LRe~~~a~ 431 (766)
.+++|++.++..
T Consensus 128 ~L~~Lk~~~e~~ 139 (146)
T 3f08_A 128 GLKALQHAFLDL 139 (146)
T ss_dssp HHHHHHHHTTC-
T ss_pred HHHHHHHHHhhh
Confidence 778888877664
No 91
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=94.07 E-value=0.094 Score=49.50 Aligned_cols=82 Identities=16% Similarity=0.365 Sum_probs=60.5
Q ss_pred cceeeeEEEecceeeeeccCCCCC----CCCCcceeeeecCceeEeeccceeeeCceEEEEEEeecCCcCcceeeeccCH
Q 004240 64 YCHLRFLFIRGKYVEMYKRDPHEN----PGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYNRLDESKKGEIACATA 139 (766)
Q Consensus 64 ~~~~ry~vl~~~~~~~yk~~p~~~----~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~ 139 (766)
-.+.|||+|=++.|-|.+..|... -+..|++.+.|-. .||. -..-+-|.|+-+. .+.+.++|.|.
T Consensus 43 ~~~eR~l~LF~~~Ll~~s~~~~~~~f~~kgklPL~g~~V~~---~ed~------~~~~~aFeI~g~~--~~~i~v~~~s~ 111 (132)
T 1v61_A 43 EKEERYFLLFSSVLIMLSASPRMSGFMYQGKIPIAGMVVNR---LDEI------EGSDCMFEITGST--VERIVVHCNNN 111 (132)
T ss_dssp CCCEEEEEECSSCEEEEECSSSSSCCEEEEEECTTTCBCST---TCSS------SSSCCCEEEECSS--SCEEEECCCCS
T ss_pred cceEEEEEEcCCeEEEEEecCCCceEEEEEEEecceeEEEe---cccc------ccCccEEEEecCC--CceEEEEeCCH
Confidence 458999999999999999888532 0357887666543 1221 1234567777544 47799999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 004240 140 GEARKWMEAFDQAKQQA 156 (766)
Q Consensus 140 eea~~W~~~~~~~~~~~ 156 (766)
||-.+|+++|..|++.|
T Consensus 112 eE~~~Wl~~L~~~i~~~ 128 (132)
T 1v61_A 112 QDFQEWMEQLNRLTKSG 128 (132)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999998854
No 92
>2le1_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, unknown function; NMR {Thermobifida fusca}
Probab=91.67 E-value=2.2 Score=39.31 Aligned_cols=141 Identities=11% Similarity=0.014 Sum_probs=77.2
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCce-EEEEEEeccCcCCCCCCCCeEEEEEEEEEccC
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQD 338 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~t-DIvY~~~kp~~lP~~vspRDFV~LRswRr~~d 338 (766)
.+..+..|++||++||++|.|... -++|.+.+.++++++.=++.. .+....+ +.+. .+.-+-...++.
T Consensus 3 ~v~~si~I~ap~e~Vw~~l~d~~~--~~~w~p~v~~~~~~~g~~~~~G~~r~~~~-----~~G~----~~~e~i~~~d~~ 71 (151)
T 2le1_A 3 TLRRSVEVAAPAADVWTLVGDFSA--IHRWHPQVSAPTLRGASPHTPGAERVFGA-----GTEE----ELVERLVERDES 71 (151)
T ss_dssp EEEEEEEESSCHHHHHHHHTTSGG--GGGTCTTCCCEEEESSCTTSTTCEEEESS-----SSSS----CEEEEEEEEETT
T ss_pred eEEEEEEecCCHHHHHHHHhCcCc--HHHhcCCceEEEEECCCCCCCCeEEEEEe-----CCCC----EEEEEEEEEeCC
Confidence 356778899999999999999865 679999988887765321111 1222211 1111 222222222332
Q ss_pred CeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeec--CCccccccCCcccchhhhHHH
Q 004240 339 GTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHS--SGWCRWKKNSSTKFEKTTHFA 416 (766)
Q Consensus 339 GsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~--KGwi~w~p~~~s~~~~~i~~~ 416 (766)
. ..+.++-+.-+ .| ++ ...+-|.++|.++ ++|+|+|-...++ .|-.... .. +.+. .
T Consensus 72 ~-~~~~~~~~~g~-~~-----~~--~~~~~~~l~~~~~------~gt~v~w~~~f~~~p~~~~~~~---~~-~~~~---~ 129 (151)
T 2le1_A 72 A-RRLVYTMPDPP-FP-----IT--NHRAVLEVVPRDD------RHCTVVWTAMFDCSPETARELE---SV-IGDG---V 129 (151)
T ss_dssp T-TEEEEEEEECS-SS-----EE--EEEEEEEEEESSS------SCEEEEEEEEEEECHHHHHHHH---HH-TTTT---H
T ss_pred C-CEEEEEEecCC-CC-----ce--eEEEEEEEEECCC------CcEEEEEEEEEEecCCCCCHHH---HH-HHHH---H
Confidence 2 22333333221 11 22 2245688888543 4799999999987 4332110 01 1122 2
Q ss_pred HHHHHHHHHHHhhcCCC
Q 004240 417 LLSQVAGLKEYIGANPA 433 (766)
Q Consensus 417 mL~~Va~LRe~~~a~~~ 433 (766)
+-..+++|+..++.+..
T Consensus 130 ~~~~L~~Lk~~~e~~~~ 146 (151)
T 2le1_A 130 FAVGLNALAERYGRLEH 146 (151)
T ss_dssp HHHHHHHHHHHTTTTSC
T ss_pred HHHHHHHHHHHhhcccc
Confidence 33577888888877643
No 93
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=91.45 E-value=0.62 Score=44.98 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=62.9
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
...+.+.|-|..- + | -|.++|.|+|.+...-||- +|... +-=....++.+|+|+-. +.++|+|-
T Consensus 49 ge~Ilk~G~v~Kr--k--G-l~~kkR~liLT~~PrL~Yv-dp~~~---~~KGeIpls~~l~ve~k-----~~~~F~I~-- 112 (151)
T 1w1g_A 49 NNLILKMGPVDKR--K--G-LFARRRQLLLTEGPHLYYV-DPVNK---VLKGEIPWSQELRPEAK-----NFKTFFVH-- 112 (151)
T ss_dssp TCCEEEEEEEEEE--E--T-TEEEEEEEEEETTTEEEEE-ETTTT---EEEEEECCCTTCEEEES-----SSSEEEEE--
T ss_pred CCcEEEEEEEEec--c--c-CcceeEEEEEcCCceEEEE-cCccc---cccceEecCCCeeEEEc-----CCCEEEEE--
Confidence 3466699988872 2 2 4579999999988887776 45433 11123446789999944 34455552
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..++...|.+. ..+|..|+.||++++.
T Consensus 113 ----Tp~RtY~~~d~-~~~AqeWv~aI~~~~~ 139 (151)
T 1w1g_A 113 ----TPNRTYYLMDP-SGNAHKWCRKIQEVWR 139 (151)
T ss_dssp ----ETTEEEEEECT-TSCHHHHHHHHHHHHH
T ss_pred ----CCCceEEEEcC-ccCHHHHHHHHHHHHH
Confidence 23477778776 7889999999999976
No 94
>3p51_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.06A {Nitrosospira multiformis}
Probab=90.08 E-value=8.6 Score=36.66 Aligned_cols=139 Identities=13% Similarity=0.004 Sum_probs=78.6
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCce-EEEEeecCc-eEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDL-ELVDSYDGH-YDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~-eVVE~lD~~-tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
.+....+|+|||++||.+|.|... - .|.+.+.++ ++++--+++ .--+... . + .+.=|--..++
T Consensus 3 ~v~~si~I~Ap~~~VW~~v~Df~~--~-~w~P~v~~s~e~~eg~~~~~vGsvR~~-g-----g------~v~Erl~~~D~ 67 (160)
T 3p51_A 3 KVYNSIVVDAPVERVWSRIRNFHD--F-SWAPSLIKSCKKVGGGGGYSVGARRLL-N-----G------EFLDTLIAYSE 67 (160)
T ss_dssp EEEEEEEESSCHHHHHHHHCCTTC--C-TTCTTTCCCEEEESSCCTTCTTCEEEE-T-----T------TEEEEEEEEET
T ss_pred EEEEEEEECCCHHHHHHHHhCcCC--C-eEccCceEEEEEEecCCCCCCCCEEEE-C-----C------EEEEEEEEEcC
Confidence 356778899999999999999876 5 999999888 776543211 1111211 1 1 12111111233
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHH
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL 417 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~m 417 (766)
+. ..+.++=++- ..|..++.++. ..+-+-+.|.+. .++|.|+|.+..++.+-. ....+-..+
T Consensus 68 ~~-~~~sY~ii~g-~l~~~~~~~~~--y~~~~~v~p~~~-----~ggt~V~w~~~~~~~~~~---------~~~~~~~~~ 129 (160)
T 3p51_A 68 IE-RRIMYSMDEG-PSPVSSGEIYN--YVGNLHLLPVTI-----DDTTFVEWSGSWESASTE---------AVEYMNTVY 129 (160)
T ss_dssp TT-TEEEEEEEEC-STTSSTTTEEE--EEEEEEEEEETT-----TTEEEEEEEEEEEESCSH---------HHHHHHHHH
T ss_pred CC-cEEEEEEecC-CCcccccceeE--EEEEEEEEEecC-----CCCEEEEEEEEEEeCHHH---------HHHHHHHHH
Confidence 22 2222222222 23322223443 356788899863 158999999999997521 112222233
Q ss_pred HHHHHHHHHHhhcC
Q 004240 418 LSQVAGLKEYIGAN 431 (766)
Q Consensus 418 L~~Va~LRe~~~a~ 431 (766)
-..+++|+..++..
T Consensus 130 ~~~L~~Lk~~~e~~ 143 (160)
T 3p51_A 130 RSLLADLAAEFTSE 143 (160)
T ss_dssp HHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhhc
Confidence 35778888888764
No 95
>3ijt_A SMU.440, putative uncharacterized protein; hypothetical protein, unknown function; 2.38A {Streptococcus mutans} SCOP: d.129.3.9 PDB: 2b79_A
Probab=90.05 E-value=5.7 Score=37.64 Aligned_cols=37 Identities=3% Similarity=0.151 Sum_probs=30.3
Q ss_pred eEEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCceE
Q 004240 259 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDLE 297 (766)
Q Consensus 259 ~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~e 297 (766)
..+..+..|+|||++|+++|.|... -++|++.+.+++
T Consensus 18 ~~i~~si~I~Appe~VW~~ltD~~~--~~~W~p~v~~~~ 54 (155)
T 3ijt_A 18 MKFSFELAVNTKKEDAWTYYSQVNQ--WFVWEGDLEQIS 54 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHHCGGG--GGGTSTTEEEEE
T ss_pred EEEEEEEEEcCCHHHHHHHHhCccc--ccccchhhEeee
Confidence 3566777899999999999999865 679999876554
No 96
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=89.32 E-value=2.1 Score=45.64 Aligned_cols=106 Identities=8% Similarity=0.160 Sum_probs=64.2
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCC------CC------C-CCcceeeeecCceeEeeccc
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHE------NP------G-IKPIRRGVIGPTLMVEELGR 109 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~------~~------~-~~pir~~~i~~~~rv~d~g~ 109 (766)
.....++|.+.....+ .-.+.||++|=..+|=+-|++... .+ + ..-.|..+--.++.|+|...
T Consensus 250 ~R~li~~G~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~ 325 (368)
T 1xcg_A 250 TRKMIHEGPLTWRISK----DKTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVAT 325 (368)
T ss_dssp GSCEEEEEEEEECCSS----SCCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECSS
T ss_pred cceEEeecceEeeecC----CCeeEEEEEcccccHHHhhcccccceeeeccccccCCCCcccCcCCceEccceeeecccC
Confidence 3566799998764332 224789999988888777765321 00 0 00112222223455666421
Q ss_pred eeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
..+.+++++. +...+...+.|.|.|.+|-..|+++|++|++.|
T Consensus 326 ---~~~~f~i~~~-~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~a 368 (368)
T 1xcg_A 326 ---DKRAFFIICT-SKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 368 (368)
T ss_dssp ---CSSEEEEEEC-CSSSTTCEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred ---CCceEEEEEe-cCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 2345555542 112335778999999999999999999999853
No 97
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=88.84 E-value=0.9 Score=42.08 Aligned_cols=99 Identities=9% Similarity=0.150 Sum_probs=59.0
Q ss_pred eEEEEEcccccccccceeeeEEEecceeeeecc-CCCCC---CCCCc---ceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 50 GWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKR-DPHEN---PGIKP---IRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 50 gw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~-~p~~~---~~~~p---ir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
.+|-.+++++.. +.|||+|......+|.. +|... +..++ |+....|..+.+-.+-++...-. +-|+|
T Consensus 17 t~l~K~~~~~~~----k~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~--~~FsI 90 (131)
T 1mai_A 17 SQLLKVKSSSWR----RERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPED--RCFSI 90 (131)
T ss_dssp EEEEEESSSSCE----EEEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGG--GEEEE
T ss_pred CeEEEECCCCcc----eeEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCcc--ceEEE
Confidence 467777776542 56999998766655553 33221 12233 45556666554422222221111 13444
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
.-.. +.+-+-|.|.|.+||..|+..|+..+.+
T Consensus 91 iy~~-~~k~LdlvA~s~~e~~~Wv~gL~~L~~~ 122 (131)
T 1mai_A 91 VFKD-QRNTLDLIAPSPADAQHWVQGLRKIIHH 122 (131)
T ss_dssp EESS-SCCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EECC-CCceEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 3332 3578999999999999999999988763
No 98
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=88.51 E-value=4.7 Score=43.80 Aligned_cols=113 Identities=17% Similarity=0.225 Sum_probs=71.4
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeec--ccee-eeCceEEE
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--GRRR-FNHGDVYV 119 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~--g~~~-~~~~~~yv 119 (766)
.....++|.+..+... -|. .+.|||+|=..+|=+=|++.... ...-.|.-+=-.++.|+|. |... .+...-+.
T Consensus 254 ~r~Li~~G~l~~~~~~-~~k--~~~r~~fLF~d~Ll~~k~~~~~~-~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~ 329 (402)
T 2dfk_A 254 SSELIYTGEMAWIYQP-YGR--NQQRVFFLFDHQMVLCKKDLIRR-DILYYKGRIDMDKYEVIDIEDGRDDDFNVSMKNA 329 (402)
T ss_dssp CCCEEEEEEEEEESST-TCC--CEEEEEEEETTEEEEEEECSSCT-TCEEEEEEEEGGGEEEEECCSEECSSSCCEESSE
T ss_pred ccceEEeceEEEEecc-CCc--eEEEEEEeeCCEEEEEEeccccC-CceEEeeeeeccceEEEecCCCCcccccccccee
Confidence 3456799999887542 222 46799999999887777653222 1222232222245666653 3211 11122356
Q ss_pred EEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 004240 120 MRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (766)
Q Consensus 120 ~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~~~~~ 160 (766)
|.|+++.. ...+.|.|.|.+|-..|+++|++|+.++...-
T Consensus 330 F~i~~~~~-~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~~~ 369 (402)
T 2dfk_A 330 FKLHNKET-EEVHLFFAKKLEEKIRWLRAFREERKMVQEDE 369 (402)
T ss_dssp EEEEESSS-SCEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCC-CeEEEEEeCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 77877653 46789999999999999999999998554433
No 99
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=87.67 E-value=2.7 Score=44.85 Aligned_cols=111 Identities=14% Similarity=0.115 Sum_probs=70.3
Q ss_pred CcceeeeEEEEEccccccc--------ccceeeeEEEecceeeeeccCCCCCC-----CCCcceeeeecCceeEeeccce
Q 004240 44 GYFEYFGWVYHMGTNSIGH--------EYCHLRFLFIRGKYVEMYKRDPHENP-----GIKPIRRGVIGPTLMVEELGRR 110 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~--------~~~~~ry~vl~~~~~~~yk~~p~~~~-----~~~pir~~~i~~~~rv~d~g~~ 110 (766)
+...++|.+.....++-|. .=.+.||++|=..+|=+=|+++...+ ..--.|.-+--.++.|+|.-..
T Consensus 208 g~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~~y~~k~~i~l~~~~v~e~~~~ 287 (353)
T 1kz7_A 208 GKLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREENGEGYEKAPSYSYKQSLNMTAVGITENVKG 287 (353)
T ss_dssp CCEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCCCSSCCCSCEEEEEEEEEGGGEEEECCBTT
T ss_pred hhhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEeccccccCCCCCCeEEEEEEeEcccceeeEcCCC
Confidence 4567999987664444452 22468999999888877776653210 1111233333345667654211
Q ss_pred eeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHHHHHH
Q 004240 111 RFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAEVEL 160 (766)
Q Consensus 111 ~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~~~~~ 160 (766)
.-+.|.|+... ....+.|.|.|.+|-..|+++|++|+.++....
T Consensus 288 -----~~~~F~i~~~~-~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~~ 331 (353)
T 1kz7_A 288 -----DTKKFEIWYNA-REEVYIIQAPTPEIKAAWVNAIRKVLTSQLQAC 331 (353)
T ss_dssp -----BTTEEEEEETT-TTEEEEEECSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCceEEEEECC-CCcEEEEECCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 11345666543 356789999999999999999999999555544
No 100
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=87.46 E-value=4.4 Score=44.67 Aligned_cols=108 Identities=15% Similarity=0.235 Sum_probs=70.1
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeec--cce-eeeCceEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEEL--GRR-RFNHGDVYVM 120 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~--g~~-~~~~~~~yv~ 120 (766)
....++|.+..+...+ |. .+.|||+|=..+|=+=|++.... ...=.|.-+--.++.|+|. |.. ..+...-+.|
T Consensus 332 r~li~~G~l~~~~~~~-~~--~~~r~~fLF~d~Ll~~k~~~~~~-~~~~~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F 407 (466)
T 2pz1_A 332 SELIYSGELTRVTQPQ-AK--SQQRMFFLFDHQLIYCKKDLLRR-DVLYYKGRLDMDGLEVVDLEDGKDRDLHVSIKNAF 407 (466)
T ss_dssp SCEEEEEEEEEECTTT-CC--EEEEEEEEETTEEEEEEECSSCT-TCEEEEEEEETTTCEEEECCSBSCCSSCCCBCEEE
T ss_pred ceeEEeeeEEEEecCC-CC--eeEEEEEEECCEEEEEEeccccC-CceEEeeeeeccceEEEeCCCCcccccccccceeE
Confidence 4567999998875421 21 36799999999887777653222 1222232232345667653 321 1222344678
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
.|+++.. ...+.|.|.|.+|-..|+++|++|+.+.
T Consensus 408 ~i~~~~~-~~~~~l~a~s~~eK~~W~~~i~~a~~~~ 442 (466)
T 2pz1_A 408 RLHRGAT-GDSHLLCTRKPEQKQRWLKAFAREREQV 442 (466)
T ss_dssp EEECSSS-CCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCC-CeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 8888653 5678999999999999999999998843
No 101
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=86.57 E-value=1.2 Score=48.55 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=60.5
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeeccceeeeCceEEEEEEe
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
....++|.++.+...+ .+.|||+|=..+|=+-|.+... .-=+|.-+=-.++.|++ ...+..-|.|.|.
T Consensus 242 r~li~~g~l~~~~~~~-----~~~r~~fLF~d~Ll~~k~~~~~---~y~~k~~i~L~~l~v~~----~~~~~~~~~f~i~ 309 (434)
T 3mpx_A 242 REFLKEGTLMKVTGKN-----RRPRHLFLMNDVLLYTYPQKDG---KYRLKNTLAVANMKVSR----PVMEKVPYALKIE 309 (434)
T ss_dssp CCEEECCEEEEEETTE-----EEEEEEEEESSEEEEEEECTTS---CEEEEEEEEC-----CC----CCCTTSCSEEEEE
T ss_pred cceEecceEEEEeCCC-----ceEEEEEEECCEEEEEEecCCC---eEEEEEEEEcCCcEEEe----cCCCCCCeeEEEe
Confidence 3456999998876543 3689999999999888855321 11122222233444432 1223344666775
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
++ .+.+.|-|.|.+|...|+++|++||++
T Consensus 310 ~~---~~~~~l~a~s~~ek~~W~~~i~~ai~e 338 (434)
T 3mpx_A 310 TS---ESCLMLSASSCAERDEWYGCLSRALPE 338 (434)
T ss_dssp CS---SCEEEEECSSHHHHHHHHHHHHHC---
T ss_pred cC---CeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 53 447999999999999999999999984
No 102
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=86.48 E-value=4.5 Score=42.14 Aligned_cols=107 Identities=11% Similarity=0.076 Sum_probs=63.9
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCC-CCcceeeeecCceeEeeccceeeeCceEEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPG-IKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRL 122 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~-~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~ 122 (766)
+...+.|.+........+.. .+.||++|=..+|=+=|++...... ..=.|.-+--.++.|+|.- .|. -+.|.|
T Consensus 201 g~li~~~~~~~~~~~~~~~~-~~~r~~fLF~d~Ll~~k~~~~~~~~~~y~~k~~i~l~~~~v~e~~----~~~-~~~F~i 274 (311)
T 1nty_A 201 GELILQESFQVWDPKTLIRK-GRERHLFLFEMSLVFSKEVKDSSGRSKYLYKSKLFTSELGVTEHV----EGD-PCKFAL 274 (311)
T ss_dssp CCEEEEEEEEEECSSSSSCC-EEEEEEEEESSEEEEEEEEECTTCCEEEEEEEEEEGGGEEEECCC----TTC-TTEEEE
T ss_pred CCceeeeeEEEEcCcccccc-cceeEEEeccCeEEEEEeeccCCCCceeEEeeeeeccceeeEEcc----CCC-CceEEE
Confidence 34557777766543322222 3789999998888777765322101 1112322333566776531 111 123455
Q ss_pred eec--CCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 123 YNR--LDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 123 yn~--~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
+.. ......+.|.|.|.+|-..|+++|++||+|+
T Consensus 275 ~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e~ 310 (311)
T 1nty_A 275 WVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQER 310 (311)
T ss_dssp EESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhhh
Confidence 542 2345678999999999999999999999853
No 103
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=85.79 E-value=3.6 Score=43.83 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=64.3
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC------------CCCCcceeeeec-CceeEeeccce
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PGIKPIRRGVIG-PTLMVEELGRR 110 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~------------~~~~pir~~~i~-~~~rv~d~g~~ 110 (766)
....++|.+.....+. =.+.|||+|=..+|=+-|++.... |+.....+.+|. .++.|+|..-+
T Consensus 257 r~li~eG~l~~~~~~~----~~~~~~~fLF~d~Ll~~k~k~~k~~~k~~~~~~~~~~~~k~~~~~~i~l~~~~v~e~~~~ 332 (377)
T 3p6a_A 257 KKLVHEGPLTWRVTKD----KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD 332 (377)
T ss_dssp SCEEEEEEEEEESSSS----CEEEEEEEEESSEEEEEEEETTEEECCCCCCC---------CSCSEEEGGGEEEEECTTC
T ss_pred ceEEEECCcEEEecCC----CeEEEEEEeeCCEEEEEEEcCceeEEeecccccccCccccCCCCCeEechhhhccccccc
Confidence 4577999997654332 237899999999888887664210 000011122332 44556653322
Q ss_pred eeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 111 RFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 111 ~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
.+.+|+. +........+++.|.|.+|-..|++.|++|++
T Consensus 333 ---~~~~~~i--~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~ 371 (377)
T 3p6a_A 333 ---HKAFYVL--FTWDQEAQIYELVAQTVSERKNWCALITETAG 371 (377)
T ss_dssp ---TTEEEEE--ETTCTTCCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ---cceeEEE--ecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 2345544 33334566789999999999999999999998
No 104
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=85.09 E-value=3.8 Score=46.52 Aligned_cols=104 Identities=16% Similarity=0.221 Sum_probs=65.3
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC------------CCCCcceeeee-cCceeEeeccce
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PGIKPIRRGVI-GPTLMVEELGRR 110 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~------------~~~~pir~~~i-~~~~rv~d~g~~ 110 (766)
....++|.+.....+. =.+.|||+|=..+|=+-|++.... ++...+.+.+| -.++.|+|..-
T Consensus 410 R~LI~eG~l~~~~~~~----k~~~r~~fLF~D~LL~~k~k~~ky~~k~~~~~~~~~~d~k~~~~~~i~L~~l~v~e~~~- 484 (536)
T 3odw_A 410 KKLVHEGPLTWRVTKD----KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVAT- 484 (536)
T ss_dssp SCEEEEEEEEEESCC-------CEEEEEEESSEEEEEEEETTEEECCCC------------CCCSEEEGGGEEEEECTT-
T ss_pred ceeeeecceEEEecCC----CeeEEEEEEcCCEEEEEEEcCCeEEEeecccccccccccccccCceeecccceeecccc-
Confidence 5677999997765322 236899999999888887654210 01111111122 23456666443
Q ss_pred eeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 111 RFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 111 ~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
..+.+|++...+ .....++|.|.|.+|-..|++.|++||+++
T Consensus 485 --d~~~ffli~~~~--~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~ 526 (536)
T 3odw_A 485 --DHKAFYVLFTWD--QEAQIYELVAQTVSERKNWCALITETAGSL 526 (536)
T ss_dssp --CTTEEEEEEC-----CCCEEEEECSSHHHHHHHHHHHHHHHHTS
T ss_pred --cCCceEEEecCC--CCceEEEEECCCHHHHHHHHHHHHHHHHhC
Confidence 245677665432 345678999999999999999999999954
No 105
>2qpv_A Uncharacterized protein ATU1531; structural genomics, PSI protein structure initiative, midwest center for structural genomics; 2.35A {Agrobacterium tumefaciens str} SCOP: d.129.3.8
Probab=85.04 E-value=12 Score=35.59 Aligned_cols=35 Identities=9% Similarity=-0.017 Sum_probs=31.0
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccccCCCCce
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEWDMLTGDL 296 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~ 296 (766)
.......|++||++||+++.|+.. -++|-+.+.+.
T Consensus 28 ~~~~si~I~ap~eeVy~~~~D~e~--lP~W~~~l~~~ 62 (156)
T 2qpv_A 28 SRIIHLSVEKPWAEVYDFAANPGN--MPRWAAGLAGG 62 (156)
T ss_dssp EEEEEEEESSCHHHHHHHHHCGGG--GGGTCGGGTTC
T ss_pred ceEEEEEEcCCHHHHHHHHHChhh--HHHHHHhhhhh
Confidence 457777899999999999999976 88999999885
No 106
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=84.58 E-value=6.2 Score=42.28 Aligned_cols=105 Identities=8% Similarity=0.121 Sum_probs=65.4
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC------------CC-CCcceeeeecCceeEeeccce
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PG-IKPIRRGVIGPTLMVEELGRR 110 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~------------~~-~~pir~~~i~~~~rv~d~g~~ 110 (766)
....++|.+.....+ .=...||++|=..+|=+-|++.... ++ ..-+|..+=-.++.|++..-
T Consensus 255 R~li~eG~l~~~~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~- 329 (385)
T 1txd_A 255 RKMIHEGPLVWKVNR----DKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVIKLSTVLVRQVAT- 329 (385)
T ss_dssp SCEEEEEEEEEESSS----SCBCCEEEEEESSEEEEEEEETTEEECCC-------------CCCSEEEGGGEEEEECCC-
T ss_pred ceEEEECcEEEEcCC----CCeEEEEEEecCCeeEEEEecCCeeEEeeccccccccCCCCcCCCCceeccccccccccc-
Confidence 566799999764322 1246799999888887766543110 00 00112222224556666421
Q ss_pred eeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHHH
Q 004240 111 RFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQAE 157 (766)
Q Consensus 111 ~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~~ 157 (766)
..+.+|+++... .....++|-|.|.+|-..|+++|++|++++.
T Consensus 330 --d~~~~f~i~~~~--~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~ 372 (385)
T 1txd_A 330 --DNKALFVISMSD--NGAQIYELVAQTVSEKTVWQDLICRMAASVK 372 (385)
T ss_dssp ---CCEEEEEEECS--SCEEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred --CCceEEEEEEcC--CCceEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 234677776542 2356789999999999999999999999554
No 107
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=84.44 E-value=6 Score=42.76 Aligned_cols=105 Identities=18% Similarity=0.141 Sum_probs=64.9
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeecccee-eeCceEEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR-FNHGDVYVMRL 122 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~-~~~~~~yv~~~ 122 (766)
+...++|.+......+ .-.+.||++|=..+|=+-|++. + .--+|.-+--..+.|+|..-.. -+...-+.|.|
T Consensus 232 grli~~G~l~~~~~~~---~~~~~~~~fLF~d~Ll~~k~k~--~--~y~~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i 304 (406)
T 2vrw_B 232 GRPKIDGELKITSVER---RSKTDRYAFLLDKALLICKRRG--D--SYDLKASVNLHSFQVRDDSSGERDNKKWSHMFLL 304 (406)
T ss_dssp CSEEEEEEEEEECSSC---CSCEEEEEEEESSEEEEEEEET--T--EEEEEEEEETTTEEEEC--------CTTCEEEEE
T ss_pred CcccccccEEEEecCC---CccceEEEEecCCEEEEEEecC--C--ceEEEEEecccceeeeecCCCCccCCccceeeEE
Confidence 3456899987764322 1137899999888887777652 1 2223333333455666532211 11223366667
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
.+.. ....++|.|.|.+|-..|+++|++|+.++
T Consensus 305 ~~~~-~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 337 (406)
T 2vrw_B 305 IEDQ-GAQGYELFFKTRELKKKWMEQFEMAISNI 337 (406)
T ss_dssp EETT-CSCEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EecC-CCceEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 6543 24568999999999999999999999854
No 108
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=82.30 E-value=34 Score=32.27 Aligned_cols=150 Identities=11% Similarity=0.058 Sum_probs=82.7
Q ss_pred EEEEEeecCCHHHHHHHHh-cCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC
Q 004240 261 VKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~-d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG 339 (766)
+..+..|++||+++|.++. |... ..++|=+.+.+++++|-=.+.-.|.+..+.+. .+. -++.-|--.. ++.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~G-----~~~-~~~kErl~~~-D~~ 76 (157)
T 1tw0_A 5 FRDETSSSVAPAKLYKALTKDSDT-IAQKIDGPIQSIELVEGNGGVGTIKKITANEG-----DKT-SFVLQKVDAI-DEA 76 (157)
T ss_dssp EEEEEEESSCHHHHHHHHHHTGGG-GGGGSCSSEEEEEEEESSSSTTCEEEEEEEET-----TEE-EEEEEEEEEE-ETT
T ss_pred EEEEEEecCCHHHHHHHHhcCcch-hhhhHHhhccEEEEEeCCCCCCeEEEEEeeCC-----Ccc-ceEEEEEEEE-ecc
Confidence 4566788999999999988 8764 36777788888888876222223555444321 110 1222222112 233
Q ss_pred eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHHHH
Q 004240 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLS 419 (766)
Q Consensus 340 sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~ 419 (766)
...+.++-++-+-.|- +| +...+-+-+.|.++ +.|.++|.+..++++-.. +. ....+...-.+..
T Consensus 77 ~~~~~y~iieGd~~~~--~~---~~~~~~~~v~~~~~------~gs~v~w~~~y~~~~~~~--~~--~~~~~~~~~~~~~ 141 (157)
T 1tw0_A 77 NLGYDYSIVGGTGLPE--SL---EKLSFETKVVAGSG------GGSISKVTLKFHTKGDAP--LS--DAVRDDALAKGAG 141 (157)
T ss_dssp TTEEEEEEEECTTSCT--TE---EEEEEEEEEEECSS------SSEEEEEEEEEEESTTCC--CC--HHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCcc--ce---EEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHHHH
Confidence 3444444444432221 11 23345667778543 369999999999886541 11 1111111222334
Q ss_pred HHHHHHHHhhcCCC
Q 004240 420 QVAGLKEYIGANPA 433 (766)
Q Consensus 420 ~Va~LRe~~~a~~~ 433 (766)
...+|.+|+-++|.
T Consensus 142 ~~k~ie~yll~~p~ 155 (157)
T 1tw0_A 142 FFKAIEGYVLANPA 155 (157)
T ss_dssp HHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHhCcc
Confidence 56778888877754
No 109
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=81.12 E-value=19 Score=34.10 Aligned_cols=149 Identities=9% Similarity=0.036 Sum_probs=84.7
Q ss_pred EEEEEeecCCHHHHHHHHh-cCCCcccccccC-CCCceEEEEeecC-ceEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 261 VKAVGVIDASADTVFEVVL-NLERHQRYEWDM-LTGDLELVDSYDG-HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~-d~~~~~R~~WD~-~~~e~eVVE~lD~-~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
+..+..|++||+++|.++. |... ..+.|-+ .+.+++++|- |+ .-.|.+..+.+. ++=-++.-|--.. +
T Consensus 5 ~~~e~~i~ap~~~vw~~~~~d~~~-~~pk~~P~~i~s~~~~eG-dgg~Gsvr~~~~~~G------~~~~~~kErl~~~-D 75 (159)
T 1e09_A 5 YESEFTSEIPPPRLFKAFVLDADN-LVPKIAPQAIKHSEILEG-DGGPGTIKKITFGEG------SQYGYVKHKIDSI-D 75 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTTEEEEEEEES-SSSTTCEEEEEECCS------SSCEEEEEEEEEE-E
T ss_pred EEEEEEecCCHHHHHHHHhcCccc-cchhhChhhccEEEEEeC-CCCCceEEEEEecCC------CCceEEEEEEEEE-c
Confidence 4566789999999999998 7753 2579998 5688888876 32 223555555421 1101232222222 3
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHH
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL 417 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~m 417 (766)
+....+.++-++-+-.+ .- -+...+-+-+.|.++ +.|.++|.+..+.++-.. +. ..-.....-.+
T Consensus 76 ~~~~~~~y~iieG~~~~---~~--~~~~~~~~~v~~~~~------~gs~v~wt~~y~~~~~~~--~~--~~~~~~~~~~~ 140 (159)
T 1e09_A 76 KENYSYSYTLIEGDALG---DT--LEKISYETKLVASPS------GGSIIKSTSHYHTKGNVE--IK--EEHVKAGKEKA 140 (159)
T ss_dssp TTTTEEEEEECCCTTTG---GG--EEEEEEEEEECCCTT------SSEEEEEEEEEEECSSCC--CC--HHHHHHHHHHH
T ss_pred CCCCEEEEEEEecccCc---cc--ceEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHH
Confidence 33455555555543221 00 123345566667543 369999999999876541 11 11111122334
Q ss_pred HHHHHHHHHHhhcCCC
Q 004240 418 LSQVAGLKEYIGANPA 433 (766)
Q Consensus 418 L~~Va~LRe~~~a~~~ 433 (766)
.....+|.+|+-+++.
T Consensus 141 ~~~~k~ie~yll~~~~ 156 (159)
T 1e09_A 141 SNLFKLIETYLKGHPD 156 (159)
T ss_dssp HHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhChh
Confidence 4566788888888765
No 110
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=80.44 E-value=5.3 Score=47.63 Aligned_cols=98 Identities=18% Similarity=0.335 Sum_probs=64.1
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC-CCCCcceeeeecCceeEeeccceeeeCceEEEEEEee
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN-PGIKPIRRGVIGPTLMVEELGRRRFNHGDVYVMRLYN 124 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~-~~~~pir~~~i~~~~rv~d~g~~~~~~~~~yv~~~yn 124 (766)
+.-.||+-.-.. .+.+-=++.=+|||.-.-|..||.+-... .-+.|+ .++++.|.= +.+-+ .=++|.++|
T Consensus 540 ~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~-~~~~~~~~~ 610 (772)
T 3zvr_A 540 VIRKGWLTINNI-GIMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSV------DNLKLRDVE-KGFMS-SKHIFALFN 610 (772)
T ss_dssp EEEEEEEEESSS-CCC---CCEEEEEEESSEEEEESSTTCCCEEEEEEC------TTEEEEEC---------CEEEEEEE
T ss_pred ceeeeeeeeccc-ccccCCCccceeeccccccccccchhhhcccccccc------cccccchhh-hcccc-ccccccccC
Confidence 557899977432 23223346669999999999999643221 013333 466655432 12212 237899999
Q ss_pred cCCc-----CcceeeeccCHHHHHHHHHHHHHH
Q 004240 125 RLDE-----SKKGEIACATAGEARKWMEAFDQA 152 (766)
Q Consensus 125 ~~~~-----~~~~~~aa~~~eea~~W~~~~~~~ 152 (766)
+... .+|++|+|.|-|+...|+.+|..|
T Consensus 611 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 611 TEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp TTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred CccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 9886 479999999999999999999655
No 111
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=79.16 E-value=9.6 Score=43.51 Aligned_cols=105 Identities=18% Similarity=0.121 Sum_probs=67.7
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeeecCceeEeecccee-eeCceEEEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVIGPTLMVEELGRRR-FNHGDVYVMRL 122 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i~~~~rv~d~g~~~-~~~~~~yv~~~ 122 (766)
+...++|.+......+ .=.+.||++|=..+|=+-|++. . ..=+|.-+=-.++.|++.--.. -....-+.|.|
T Consensus 404 grll~~G~l~~~~~~~---~~~~~r~~fLF~d~Ll~~k~~~--~--~y~~k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i 476 (587)
T 3ky9_A 404 GRPKIDGELKITSVER---RSKMDRYAFLLDKALLICKRRG--D--SYDLKDFVNLHSFQVRDDSSGDRDNKKWSHMFLL 476 (587)
T ss_dssp CCEEEEEEEEEECSSC---CSCEEEEEEEETTEEEEEEEET--T--EEEEEEEEEGGGEEEEEC-----CCCTTCEEEEE
T ss_pred CceEEEeeEEEEeccC---CCcceEEEEEECCEEEEEEecC--C--EEEeeeeechhhceeeecCCCCcccccccceeEE
Confidence 3356899998764332 1236899999999988888762 2 2224544445667777642211 11223466777
Q ss_pred eecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 123 YNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 123 yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
.++.. ...++|.|.|.+|-..|+++|++|+++.
T Consensus 477 ~~~~~-~~~~~L~A~S~eeK~~Wi~~I~~ai~~~ 509 (587)
T 3ky9_A 477 IEDQG-AQGYELFFKTRELKKKWMEQFEMAISNI 509 (587)
T ss_dssp EETTC----CEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEcCC-CceEEEEeCCHHHHHHHHHHHHHHhhhh
Confidence 77543 4679999999999999999999999843
No 112
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=77.96 E-value=14 Score=39.84 Aligned_cols=105 Identities=9% Similarity=0.131 Sum_probs=62.8
Q ss_pred CCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC------------CCCCcc-eeeeecCceeEeeccc
Q 004240 43 KGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN------------PGIKPI-RRGVIGPTLMVEELGR 109 (766)
Q Consensus 43 ~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~------------~~~~pi-r~~~i~~~~rv~d~g~ 109 (766)
.....++|.+.....+. =.+.||++|=..+|=+-|++.... ++...+ |.-+--.++.|++..
T Consensus 292 ~r~li~eG~l~~~~~~~----~~~~~~~fLF~d~Ll~~k~~~~k~~~~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~- 366 (418)
T 3t06_A 292 TRKMIHEGPLTWRISKD----KTLDLHVLLLEDLLVLLQKQDEKLLLKCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVA- 366 (418)
T ss_dssp GSCEEEEEEEEECCBTT----BCCEEEEEEESSEEEEEEECSSCEECCC-------------CCCSEEEGGGEEEEECS-
T ss_pred cceeEEeceEEEEeCCC----CeEEEEEEecCCEEEEEEEcCCceEEeecccccccCCCcccccCCceechhceecccc-
Confidence 45677999998755321 235799999988888877653210 000111 111222345555432
Q ss_pred eeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
-....+++... +.....+.++|.|.|.+|-..|+++|++|+..
T Consensus 367 --~~~~~f~l~~~-~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 367 --TDKRAFFIICT-SKLGPPQIYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp --SCSSEEEEEEC-CSSSTTCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred --ccCceEEEEec-CCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 12334554431 11122368899999999999999999999884
No 113
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=76.44 E-value=33 Score=32.35 Aligned_cols=150 Identities=9% Similarity=0.016 Sum_probs=82.8
Q ss_pred EEEEEEeecCCHHHHHHHHh-cCCCcccccccCCCCceEEEEeecC-ceEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 260 LVKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDG-HYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~-d~~~~~R~~WD~~~~e~eVVE~lD~-~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
.+..+..|++||+++|.++. |... ..+.|=+.+.+++++|- |+ .-.|.+..+.+. .+. -++.-|--.. +
T Consensus 5 ~~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG-dgg~Gsir~~~~~~g-----~~~-~~~kErl~~~-D 75 (158)
T 2qim_A 5 TFQDEYTSTIAPAKLYKALVTDADI-IIPKAVETIQSVEIVEG-NGGPGTIKKLTFIEG-----GES-KYVLHKIEAI-D 75 (158)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHH-HHHHHCTTEEEEEEEES-SSSTTCEEEEEEEET-----TEE-EEEEEEEEEE-E
T ss_pred EEEEEEEecCCHHHHHHHHhcCccc-hhhhHHhhCcEEEEEec-CCCCCeEEEEEEcCC-----Ccc-eeEEEEEEEE-e
Confidence 34566788999999999998 7753 25777788888888876 32 223544444321 110 1222221112 2
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHH
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFAL 417 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~m 417 (766)
+....+.++-++-+-.|- + + +...+-+-+.|.++ +.|.++|.+..++++-.. +. ....+...-.+
T Consensus 76 ~~~~~~~y~iieG~~~~~--~-~--~~~~~~~~v~~~~~------~gs~v~wt~~y~~~~~~~--~~--~~~~~~~~~~~ 140 (158)
T 2qim_A 76 EANLGYNYSIVGGVGLPD--T-I--EKISFETKLVEGAN------GGSIGKVTIKIETKGDAQ--PN--EEEGKAAKARG 140 (158)
T ss_dssp GGGTEEEEEEEEESSCCC--S-E--EEEEEEEEEEECST------TCEEEEEEEEEEESTTCC--CC--HHHHHHHHHHH
T ss_pred cCCCEEEEEEEeccCCcc--c-e--EEEEEEEEEEecCC------CCEEEEEEEEEEECCCCC--CC--HHHHHHHHHHH
Confidence 333444444444332110 1 1 23445667778543 369999999999886541 11 11111112233
Q ss_pred HHHHHHHHHHhhcCCC
Q 004240 418 LSQVAGLKEYIGANPA 433 (766)
Q Consensus 418 L~~Va~LRe~~~a~~~ 433 (766)
..-..+|.+|+-++|.
T Consensus 141 ~~~~k~ie~yll~~p~ 156 (158)
T 2qim_A 141 DAFFKAIESYLSAHPD 156 (158)
T ss_dssp HHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHhCcC
Confidence 4456788888888765
No 114
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=75.57 E-value=19 Score=35.54 Aligned_cols=116 Identities=12% Similarity=0.062 Sum_probs=64.3
Q ss_pred EeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEE-ccCCeEEE
Q 004240 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR-GQDGTYTI 343 (766)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr-~~dGsYVI 343 (766)
..|++|+++++.++.|... -..|=+.+..+++++-=++--.|-+..+... .| +-.++..-. .++..+.+
T Consensus 41 ~~I~Apa~~vW~lv~df~~--~~~w~p~I~s~e~~eGdg~vGsVR~~t~~~G-~p-------~~~vkErL~~iD~~~~~~ 110 (190)
T 3kl1_A 41 QRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDGDVGSVREVTVISG-LP-------ASTSTERLEFVDDDHRVL 110 (190)
T ss_dssp EEESSCHHHHHHHHHCTTC--GGGTCSSEEEEEEEESSSSTTCEEEEEECSS-SS-------CEEEEEEEEEEETTTTEE
T ss_pred EEecCCHHHHHHHHhCCCC--hhHcccccCEEEEEcCCCCCCeEEEEEecCC-Cc-------cceEEEEEEEEeccCCEE
Confidence 4689999999999999865 5689899899988754332234555555432 12 223333221 12322222
Q ss_pred EEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeee-cCCcc
Q 004240 344 LQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWC 399 (766)
Q Consensus 344 a~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD-~KGwi 399 (766)
.++=++- .. |...| ++.+ .+.|..+.+ .+.++|.|+|....| +.|+.
T Consensus 111 sY~iieG-~~-~~~~Y-~s~~-----~v~~~~~~~-~~~~gt~V~Ws~~f~~p~g~~ 158 (190)
T 3kl1_A 111 SFRVVGG-EH-RLKNY-KSVT-----SVNEFLNQD-SGKVYTVVLESYTVDIPEGNT 158 (190)
T ss_dssp EEEEEEE-SS-SCCSC-EEEE-----EEEEEEC-C-CCCEEEEEEEEEEEECCTTCC
T ss_pred EEEEEec-CC-ccccE-EEEE-----EEEeccccc-CCCCcEEEEEEEEEEcCCCCC
Confidence 2222221 12 23232 3332 344442100 123689999999999 78887
No 115
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=74.03 E-value=13 Score=39.14 Aligned_cols=99 Identities=13% Similarity=0.149 Sum_probs=64.1
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCC--CCC----CCCcceeeeecCceeEeeccceeeeCceE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPH--ENP----GIKPIRRGVIGPTLMVEELGRRRFNHGDV 117 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~--~~~----~~~pir~~~i~~~~rv~d~g~~~~~~~~~ 117 (766)
....++|.+...| -.+.||++|=..+|=+-|.+.. .-| ..-=+|.-+-=.++.|+|..-. ...-
T Consensus 245 r~li~eG~l~~~g-------~~~~~~~fLF~d~Ll~~k~~~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~d~---~~~~ 314 (354)
T 1dbh_A 245 NEFIMEGTLTRVG-------AKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT---NEYK 314 (354)
T ss_dssp CCEEEEEEEEETT-------CSSCEEEEEESSEEEEEEECTTCCCCTTSCCCSEEEEEEEESCSCEEEECCCS---SSCC
T ss_pred ceEEEEeeEEEEe-------cCceEEEEEeCCEEEEEecCCCCCCCCCCCCcceeEEEEEeccceEEEeCCcc---cccC
Confidence 4567999998874 2478899998888877776521 111 0111233333345666653110 1223
Q ss_pred EEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 118 yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+.|.|+++. ...+.|-|.|.+|-..|+++|++|..
T Consensus 315 ~~F~i~~~~--~~~~~l~a~s~~ek~~W~~~i~~~~~ 349 (354)
T 1dbh_A 315 HAFEIILKD--ENSVIFSAKSAEEKNNWMAALISLQY 349 (354)
T ss_dssp SEEEECCTT--SCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ccEEEecCC--CCEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 556777664 46799999999999999999999954
No 116
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=72.99 E-value=14 Score=39.29 Aligned_cols=112 Identities=8% Similarity=-0.018 Sum_probs=61.2
Q ss_pred CcceeeeEEEEEcccc--cccccceeeeEEEecceeeeeccCCCCCC----CCCcceeeeecCceeEeeccceeeeCceE
Q 004240 44 GYFEYFGWVYHMGTNS--IGHEYCHLRFLFIRGKYVEMYKRDPHENP----GIKPIRRGVIGPTLMVEELGRRRFNHGDV 117 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~--~g~~~~~~ry~vl~~~~~~~yk~~p~~~~----~~~pir~~~i~~~~rv~d~g~~~~~~~~~ 117 (766)
+...++|.+....... +-..-.+.||++|=..+|=+=|.+..... ..-=.|.-+=-.++.|+|.--. ....|
T Consensus 205 ~~Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~~~~~~~~y~~k~~i~l~~~~v~~~~~~--~~~~F 282 (354)
T 2rgn_B 205 GKLLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGVRGGTQPGYVYKNSIKVSCLGLEGNLQG--DPCRF 282 (354)
T ss_dssp CCEEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC--------CCEEEEEEEEGGGEEEEESGGG--CTTEE
T ss_pred ccccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCCCCCCCCceEEcceeeccceeeeeccCC--CCceE
Confidence 3455777765432111 00112478999998888877665542110 0111222222345666654110 12233
Q ss_pred EEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH-HHHH
Q 004240 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ-QAEV 158 (766)
Q Consensus 118 yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~-~~~~ 158 (766)
.+ ..-++......+.|-|.|.+|-..|+++|.+|++ |++.
T Consensus 283 ~i-~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~~~ 323 (354)
T 2rgn_B 283 AL-TSRGPEGGIQRYVLQAADPAISQAWIKHVAQILESQRDF 323 (354)
T ss_dssp EE-EEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EE-EecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 32 2223333457889999999999999999999999 4443
No 117
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=72.54 E-value=53 Score=32.18 Aligned_cols=139 Identities=15% Similarity=0.104 Sum_probs=74.3
Q ss_pred EEeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCce-EEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC---
Q 004240 264 VGVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG--- 339 (766)
Q Consensus 264 ~gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~t-DIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG--- 339 (766)
...|+|||++||.+|.|... -..|-+.+..+ +++--++.. .|-+..+... +| --++.=|--..+++.
T Consensus 32 ~~~I~Apa~~VW~~v~df~~--l~~w~P~V~s~-~~eG~~ggvGsvR~lt~~~G-~p-----~~~vkErL~~~D~~~~~~ 102 (183)
T 3rt2_A 32 VKHIKAPLHLVWSIVRRFDE--PQKYKPFISRC-VVQGKKLEVGSVREVDLKSG-LP-----ATKSTEVLEILDDNEHIL 102 (183)
T ss_dssp EEEESSCHHHHHHHHTCTTC--GGGTCTTEEEE-EESSSCCCTTCEEEEEECCS-ST-----TCEEEEEEEEEETTTTEE
T ss_pred EEEEeCCHHHHHHHHhCcCc--hhhcCccceEE-EeeCCCCCCCcEEEEEeCCC-Cc-----cceEEEEEEEEECCCCEE
Confidence 34699999999999999866 56899988877 443211111 2444444431 12 123333322233332
Q ss_pred eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecC-CCCCCCCCceEEEEEEeee-cCCccccccCCcccchhhhHHHH
Q 004240 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLN-LPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFAL 417 (766)
Q Consensus 340 sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~-~~~~~~~~~c~VT~I~qvD-~KGwi~w~p~~~s~~~~~i~~~m 417 (766)
+|.|..- ..| -+.| .+-+-+.|.+ + +.++|.|+|....| +.|+. ..-...|...+.-.=
T Consensus 103 sY~Iieg-----~lp-~~~y------~ati~v~p~~~d----G~~gt~V~Ws~~fd~~~g~~---~e~~~~~~~~i~~~~ 163 (183)
T 3rt2_A 103 GIRIVGG-----DHR-LKNY------SSTISLHSETID----GKTGTLAIESFVVDVPEGNT---KEETCFFVEALIQCN 163 (183)
T ss_dssp EEEEEEE-----SCS-CTTC------EEEEEEEEEEET----TEEEEEEEEEEEEECCTTCC---HHHHHHHHHHHHHHH
T ss_pred EEEEecC-----Ccc-eeEE------EEEEEEEEecCC----CCCCEEEEEEEEEEcCCCCC---HHHHHHHHHHHHHHH
Confidence 3444433 222 3332 3455667765 3 21279999999999 56775 211122333343333
Q ss_pred HHHHHHHHHHhhc
Q 004240 418 LSQVAGLKEYIGA 430 (766)
Q Consensus 418 L~~Va~LRe~~~a 430 (766)
|..+++.-|-+..
T Consensus 164 L~~L~~~~e~~~~ 176 (183)
T 3rt2_A 164 LNSLADVTERLQA 176 (183)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 4555555555544
No 118
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=70.88 E-value=27 Score=34.07 Aligned_cols=102 Identities=10% Similarity=0.222 Sum_probs=61.3
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC--CCCCcceeeeec-CceeEeeccceeeeCceEEEE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN--PGIKPIRRGVIG-PTLMVEELGRRRFNHGDVYVM 120 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~--~~~~pir~~~i~-~~~rv~d~g~~~~~~~~~yv~ 120 (766)
....+||=++.-..+. . ...||++|=..+|=+=+++.... ..... ++-+|. ..+.|.+.-. -.+.+|++
T Consensus 69 R~Ll~eG~L~~k~~~~--~--~~d~~~fLf~D~Ll~~~~~~~ky~~~~~~~-~~pvi~L~~~~vre~a~---d~~~~fli 140 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAAG--R--LKEVQAVLLTDILVFLQEKDQKYIFASLDQ-KSTVISLKKLIVREVAH---EEKGLFLI 140 (185)
T ss_dssp SCEEEEEEEEEECTTC--C--EEEEEEEEESSEEECCEEETTEEECCCCSS-SCSEEESSSCEEECCSS---CSSEEEEE
T ss_pred CceeeeceEEEeccCC--C--eeeEEEEeecCEEEEEEecCCEEEEEcccC-CCCeEeecceEEeccCC---CCCeEEEE
Confidence 4566899887543332 1 27899999888775544432111 00000 122222 2344554433 23567776
Q ss_pred EEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHH
Q 004240 121 RLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQ 155 (766)
Q Consensus 121 ~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~ 155 (766)
+.. .....-++|-|.|++|-..|+++|++|++.
T Consensus 141 ~~~--~~g~~~yel~a~s~~er~~W~~~I~~Ai~~ 173 (185)
T 2lg1_A 141 SMG--MTDPEMVEVHASSKEERNSWIQIIQDTINT 173 (185)
T ss_dssp CCS--SSCCCCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred Eec--CCCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Confidence 543 223567799999999999999999999984
No 119
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=69.93 E-value=44 Score=31.37 Aligned_cols=149 Identities=9% Similarity=0.012 Sum_probs=80.8
Q ss_pred EEEEEeecCCHHHHHHHHh-cCCCcccccccCCCCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC
Q 004240 261 VKAVGVIDASADTVFEVVL-NLERHQRYEWDMLTGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG 339 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~-d~~~~~R~~WD~~~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG 339 (766)
+..+..|++||+++|.++. |... ..++|=+.+.+++++|-=.+.-.|.+..+.+. .+. -++.-|--.. ++.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~-~~pk~~~~i~s~~i~eG~g~~Gsir~~~~~~G-----~~~-~~~kErl~~~-D~~ 76 (155)
T 1icx_A 5 FENEQSSTVAPAKLYKALTKDSDE-IVPKVIEPIQSVEIVEGNGGPGTIKKIIAIHD-----GHT-SFVLHKLDAI-DEA 76 (155)
T ss_dssp EEEEEEESSCHHHHHHHHTTTHHH-HHHHHSTTEEEEEEEESSSSTTCEEEEEEESS-----SSE-EEEEEEEEEE-EGG
T ss_pred EEEEEEecCCHHHHHHHHhcCcch-hcchhhhhccEEEEEecCCCCCeEEEEEEecC-----Ccc-eeEEEEEEEE-ecc
Confidence 4566788999999999998 7753 25777788888888886222223555444421 111 1222222212 232
Q ss_pred eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHHHHHH
Q 004240 340 TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHFALLS 419 (766)
Q Consensus 340 sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~~mL~ 419 (766)
...+.++-++-+-.|- +| +...+-+-+.|.+. +.|.++|.+..+++|-. +. ..-.+.+.-.+..
T Consensus 77 ~~~~~y~iieGd~~~~--~~---~~~~~~~~v~~~~~------~gs~v~w~~~y~~~~~~---~~--~~~~~~~~~~~~~ 140 (155)
T 1icx_A 77 NLTYNYSIIGGEGLDE--SL---EKISYESKILPGPD------GGSIGKINVKFHTKGDV---LS--ETVRDQAKFKGLG 140 (155)
T ss_dssp GTEEEEEEEEETTSCT--TE---EEEEEEEEEEECGG------GCEEEEEEEEEEESSSS---CC--HHHHTTHHHHHHH
T ss_pred CCEEEEEEEecCCCcc--ce---EEEEEEEEEEecCC------CCEEEEEEEEEEECCCC---CC--HHHHHHHHHHHHH
Confidence 3444444444332221 11 23345666777543 35999999999988654 21 1011011122234
Q ss_pred HHHHHHHHhhcCCC
Q 004240 420 QVAGLKEYIGANPA 433 (766)
Q Consensus 420 ~Va~LRe~~~a~~~ 433 (766)
-+.+|.+|+-++|.
T Consensus 141 ~~k~ie~yll~~p~ 154 (155)
T 1icx_A 141 LFKAIEGYVLAHPD 154 (155)
T ss_dssp HHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHhCCC
Confidence 45777788877753
No 120
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=67.28 E-value=65 Score=28.89 Aligned_cols=98 Identities=13% Similarity=0.087 Sum_probs=53.1
Q ss_pred ceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCccee--eeecCceeEeeccceeeeCceEEEEEEe
Q 004240 46 FEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRR--GVIGPTLMVEELGRRRFNHGDVYVMRLY 123 (766)
Q Consensus 46 ~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~--~~i~~~~rv~d~g~~~~~~~~~yv~~~y 123 (766)
..+||=+..+-+ -.....+++||+|=+-.|=|=++++... + +.+- .+--.++.|+|..=.......|.|..
T Consensus 8 lv~eG~l~el~~--~~~k~~~~v~~FLfND~Ll~a~~~~~~~-~--~~~~~~~~~L~~~~v~d~~d~~~~~n~f~i~~-- 80 (113)
T 1zc3_B 8 LVYNGDLVEYEA--DHMAQLQRVHGFLMNDCLLVATWLPQRR-G--MYRYNALYPLDRLAVVNVKDNPPMKDMFKLLM-- 80 (113)
T ss_dssp EEEEEEEEEEET--TTCCEEEEEEEEEESSEEEEEEEECCTT-S--CEEEEEEEETTTCEEEEECCBTTBSSEEEEEE--
T ss_pred EEEeCcEEEEcc--ccCCCCccEEEEecCCEEEEEEEeccCc-c--cEEEEEEEEcccCEEEECCCCcccceEEEEEe--
Confidence 447776665533 2334456776666666554444444321 1 1111 11112245554321112344444432
Q ss_pred ecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 124 NRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 124 n~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
. .+.-.+.|.|++|-..|+.+|++|++
T Consensus 81 -~---~~s~~~~aes~~eK~~Wl~~~~~a~~ 107 (113)
T 1zc3_B 81 -F---PESRIFQAENAKIKREWLEVLEETKR 107 (113)
T ss_dssp -T---TEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -C---CceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 1 23468889999999999999999987
No 121
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=66.02 E-value=8.4 Score=40.56 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=58.1
Q ss_pred cceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC-------CCCCcceeeeecCceeEeeccce--eeeC-
Q 004240 45 YFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN-------PGIKPIRRGVIGPTLMVEELGRR--RFNH- 114 (766)
Q Consensus 45 ~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~-------~~~~pir~~~i~~~~rv~d~g~~--~~~~- 114 (766)
...++|.+.. . -| +.||++|=..+|=+=|.+.... -...|+. ++.|++.--. ...|
T Consensus 231 ~li~~G~l~~---~-~~----~~~~~fLF~d~Ll~~k~~~~~~~~~~~v~k~~i~l~------~l~v~~~~d~~~~~~~s 296 (346)
T 2z0q_A 231 VLCCHGELKN---N-RG----VKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVK------DLTLEDLQDGEVRLGGS 296 (346)
T ss_dssp CEEEEEEEEE---T-TS----CEEEEEEESSEEEEEEEEEETTEEEEEESSCCEEGG------GCEEEECCTTTSCCCSC
T ss_pred EEEEeceeEE---C-CC----cEEEEEECCCcEEEEEEeccCCceeeeeecCCcchh------hceeeecCCCccccCcc
Confidence 4568888764 1 13 6899999888887776543211 0123333 3444443110 0000
Q ss_pred ---------ceEEEEEEeecC-CcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 115 ---------GDVYVMRLYNRL-DESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 115 ---------~~~yv~~~yn~~-~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..-+.|.|+.+. .....++|.|.|.+|-..|+++|++|++
T Consensus 297 ~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 297 LRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp C--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 122456665442 2357889999999999999999999974
No 122
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=63.40 E-value=10 Score=38.06 Aligned_cols=48 Identities=8% Similarity=0.317 Sum_probs=34.0
Q ss_pred CCCcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCCCCCCcceeeee
Q 004240 42 EKGYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHENPGIKPIRRGVI 98 (766)
Q Consensus 42 ~~~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~~~~~pir~~~i 98 (766)
..+.+-.+|||+.- ..+-.++ ++|+|||++..+.||+.+ ..++++|.+
T Consensus 17 ~~~~~~~~g~l~~~--~~~~~~w-~~rw~vl~~~~~~~~~~~------~~~~k~G~L 64 (228)
T 3tfm_A 17 GPGSPYFHSFLYMN--GGLMNSW-KRRWCVLKDETFLWFRSK------QEALKQGWL 64 (228)
T ss_dssp ----CCEEEEEEEC--CTTTCCC-EEEEEEEETTEEEEESSC------CCSSEEEEE
T ss_pred CCCCCceEEEEeec--Ccccccc-eEEEEEEeCCEEEEeccC------CCcceEEEE
Confidence 44566799999984 4455556 999999999999999943 346676654
No 123
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=61.75 E-value=1.7 Score=48.23 Aligned_cols=100 Identities=10% Similarity=0.072 Sum_probs=0.0
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCC--CC-----------CCCcc-eeeeecCceeEeeccc
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHE--NP-----------GIKPI-RRGVIGPTLMVEELGR 109 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~--~~-----------~~~pi-r~~~i~~~~rv~d~g~ 109 (766)
....++|.++..++ .+.|||+|=..+|=+-|..... .+ ....+ |.-+--.++.|++.--
T Consensus 251 r~li~eG~l~~~~~-------~~~~~~fLF~d~Ll~~k~~~~~~~~~g~~~~f~~~~~~~~~v~k~~i~l~~~~v~~~~d 323 (510)
T 3jzy_A 251 RKLLHSGKLYKTKS-------NKELHGFLFNDFLLLTYMVKQFAVSSGSEKLFSSKSNAQFKMYKTPIFLNEVLVKLPTD 323 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeEEeceEEEcCC-------CcEEEEEcccceeEEeeecccccccCCcccccCcccccceeEEcCceehhheEEeccCC
Confidence 34558888876532 2589999988888777744322 00 01112 2323333444544200
Q ss_pred eeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHHHH
Q 004240 110 RRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQQA 156 (766)
Q Consensus 110 ~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~~~ 156 (766)
.+..-+.|.|+.+. ..++|.|.|.+|...|+++|++|++++
T Consensus 324 ---~~~~~~~F~i~~~~---~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 324 ---PSSDEPVFHISHID---RVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp -----------------------------------------------
T ss_pred ---CCccccceeeeccc---eeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 01234567887753 479999999999999999999999844
No 124
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=60.13 E-value=24 Score=43.36 Aligned_cols=99 Identities=14% Similarity=0.211 Sum_probs=64.5
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEecceeeeeccCCCCC--CC----CCcceeeeecCceeEeeccceeeeCceE
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRGKYVEMYKRDPHEN--PG----IKPIRRGVIGPTLMVEELGRRRFNHGDV 117 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~~~~~~yk~~p~~~--~~----~~pir~~~i~~~~rv~d~g~~~~~~~~~ 117 (766)
....++|.+..+++. +.||++|=..+|=+=|++.... ++ ..-+|.-+-=.++.|+|.--. ...-
T Consensus 442 r~Li~eG~l~~~~~k-------~~r~~FLF~D~Ll~~K~~~~~~~~~g~~~~~y~~k~~i~L~~l~V~~~~d~---~~~~ 511 (1049)
T 3ksy_A 442 NEFIMEGTLTRVGAK-------HERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDT---NEYK 511 (1049)
T ss_dssp SCCCCEEEEEETTCS-------SCEEEEEETTEEEEEECCTTCCCCTTSCCCSCCCCCEECCSSCCCCCCCCS---SSCC
T ss_pred ceEEEeceEEEEccC-------ceEEEEeeCCeEEEEEecCccCCCCCCCCCceEEEEEEEcCceEEEECCCC---cccc
Confidence 455699999887632 7899999999888877653210 00 112233233334445433111 1234
Q ss_pred EEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 118 YVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 118 yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
+.|.|.++.. ..+.|.|.|.+|-.+|+++|+.+..
T Consensus 512 ~~F~I~~~~~--~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 512 HAFEIILKDE--NSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp SEEEECCTTS--CCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCC--CEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 5777777653 6899999999999999999998866
No 125
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=60.09 E-value=55 Score=32.85 Aligned_cols=136 Identities=13% Similarity=0.124 Sum_probs=69.7
Q ss_pred EeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCce-EEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC---e
Q 004240 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---T 340 (766)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~t-DIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG---s 340 (766)
..|+|||++||.+|.|... -+.|=+.+..|++++--++.. .|-+..+... +| -..+.=|--..++.. +
T Consensus 60 ~~I~ApadkVW~lv~Df~~--l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~~G-~p-----~~~vkErL~~lDde~~~~s 131 (208)
T 3jrs_A 60 QRIHAPPETVWSVVRRFDR--PQIYKHFIKSCNVSEDFEMRVGCTRDVNVISG-LP-----ANTSRERLDLLDDDRRVTG 131 (208)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCTTEEEEECCTTCCCSTTCEEEEEECTT-SS-----CCEEEEEEEEEETTTTEEE
T ss_pred EEEeCCHHHHHHHHhCcCC--hhHccccceEEEEecCCCCCCCeEEEEEecCC-Cc-----cceEEEEEEEEeccCCEEE
Confidence 4689999999999999876 578988877777654211111 2434444321 12 123332222223322 3
Q ss_pred EEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeee------cCCccccccCCcccchhhhH
Q 004240 341 YTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH------SSGWCRWKKNSSTKFEKTTH 414 (766)
Q Consensus 341 YVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD------~KGwi~w~p~~~s~~~~~i~ 414 (766)
|-|.. - .. |.+.|. +-.-+.|... .++|.|+|..... +.|+. ..-...|...
T Consensus 132 YsIie----G-~l-pv~~Y~------sti~V~p~~~-----g~~t~V~Wt~~fes~~~D~p~g~~---~e~a~~~~~~-- 189 (208)
T 3jrs_A 132 FSITG----G-EH-RLRNYK------SVTTVHRFEK-----EEEEERIWTVVLESYVVDVPEGNS---EEDTRLFADT-- 189 (208)
T ss_dssp EEEEE----S-SS-SCTTCE------EEEEEEEEEC----------CEEEEEEEEEEEECCTTSC---HHHHHHHHHH--
T ss_pred EEEee----C-Cc-ceeeEE------EEEEEEEccC-----CCccEEEEEEEEEEccCCCCCCCC---HHHHHHHHHH--
Confidence 44433 1 22 344654 4455677643 2578999998887 66776 1101111111
Q ss_pred HHHHHHHHHHHHHhhcC
Q 004240 415 FALLSQVAGLKEYIGAN 431 (766)
Q Consensus 415 ~~mL~~Va~LRe~~~a~ 431 (766)
..-+-+++|+..++..
T Consensus 190 -vy~~gL~~L~~~~e~~ 205 (208)
T 3jrs_A 190 -VIRLNLQKLASITEAM 205 (208)
T ss_dssp -HHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHhh
Confidence 1235677777766654
No 126
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=49.73 E-value=2.1e+02 Score=28.56 Aligned_cols=138 Identities=13% Similarity=0.136 Sum_probs=74.9
Q ss_pred eecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCce-EEEEEEeccCcCCCCCCCCeEEEEEEEEEccCC---eE
Q 004240 266 VIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGHY-DVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQDG---TY 341 (766)
Q Consensus 266 vVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~t-DIvY~~~kp~~lP~~vspRDFV~LRswRr~~dG---sY 341 (766)
.|+|||++||.+|.|... -..|-+.+..|++ +- ++.. .|-+..+... +| --++.-|--..++.. +|
T Consensus 59 ~I~ApadkVW~lV~Df~~--l~kW~P~V~s~ev-eG-dg~vGsVR~vt~~~G-~p-----~~~vkErL~~lDde~~~~sY 128 (205)
T 3oqu_A 59 HIKAPLHLVWSLVRRFDQ--PQKYKPFVSRCTV-IG-DPEIGSLREVNVKSG-LP-----ATTSTERLELLDDEEHILGI 128 (205)
T ss_dssp EESSCHHHHHHHHTCTTC--GGGTCTTEEEEEC-CS-SCCTTCEEEEEECTT-SS-----CSEEEEEEEEEETTTTEEEE
T ss_pred EEcCCHHHHHHHHhCcCC--hhHcCccceEEEe-eC-CCCCCcEEEEEEcCC-Cc-----cceEEEEEEEEECCCCEEEE
Confidence 689999999999999876 5689998887753 31 1111 2444444431 12 123322222223332 45
Q ss_pred EEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeee-cCCccccccCCcccchhhhHHHHHHH
Q 004240 342 TILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIH-SSGWCRWKKNSSTKFEKTTHFALLSQ 420 (766)
Q Consensus 342 VIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD-~KGwi~w~p~~~s~~~~~i~~~mL~~ 420 (766)
.|..- ..| -+.| .+-.-+.|.+.+ +...|.+.+=..+| +.|+. -.-...|...+...=|..
T Consensus 129 sIieG-----~lp-v~~Y------~ati~V~p~~~d---G~~~T~v~ws~~~D~p~g~t---~e~~~~~v~~v~~~gL~~ 190 (205)
T 3oqu_A 129 KIIGG-----DHR-LKNY------SSILTVHPEIIE---GRAGTMVIESFVVDVPQGNT---KDETCYFVEALIRCNLKS 190 (205)
T ss_dssp EEEEE-----SSS-CTTC------EEEEEEEEECCC---C-CEEEEEEEEEEECCTTCC---HHHHHHHHHHHHHHHHHH
T ss_pred EEEec-----Ccc-eeEE------EEEEEEEEccCC---CCceEEEEEEEeccCCCCCC---HHHHHHHHHHHHHHHHHH
Confidence 45442 223 3343 445567787741 22478999888999 78887 211122333333333555
Q ss_pred HHHHHHHhhcC
Q 004240 421 VAGLKEYIGAN 431 (766)
Q Consensus 421 Va~LRe~~~a~ 431 (766)
++...|-+..+
T Consensus 191 L~~~~e~~~~~ 201 (205)
T 3oqu_A 191 LADVSERLASQ 201 (205)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhhc
Confidence 55555555443
No 127
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=49.25 E-value=1.7e+02 Score=27.35 Aligned_cols=118 Identities=9% Similarity=0.028 Sum_probs=67.1
Q ss_pred EEEEEEeecCCHHHHHHH-HhcCCCcccccccCCC-CceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 260 LVKAVGVIDASADTVFEV-VLNLERHQRYEWDMLT-GDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~-L~d~~~~~R~~WD~~~-~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
.+..+..+++||+++|.+ +.|... -++.|-+.+ .+++++|-=++.=.|.+..+.+ ..++ -++.=|--..++
T Consensus 4 ~~~~e~~i~a~a~kvw~~~v~d~~~-l~pk~~P~~i~s~~~~eGdgg~Gsvr~~~~~~-----g~~~-~~~kErl~~iD~ 76 (155)
T 2flh_A 4 EFNTQTELSVRLEALWAVLSKDFIT-VVPKVLPHIVKDVQLIEGDGGVGTILIFNFLP-----EVSP-SYQREEITEFDE 76 (155)
T ss_dssp EEEEEEEESSCHHHHHHHHHTSCTT-HHHHHCTTTEEEEEEEECSSSTTCEEEEEECT-----TSSS-CEEEEEEEEEET
T ss_pred EEEEEEEecCCHHHHHHHHhccccc-ccchhccccceEEEEEcCCCCCCeEEEEEeeC-----CCCC-cEEEEEEEEEeC
Confidence 345667889999999999 788765 348999855 6667776532222355555442 1233 455444443443
Q ss_pred CC---eEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCcc
Q 004240 338 DG---TYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (766)
Q Consensus 338 dG---sYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi 399 (766)
+. +|.|..-.+- ..+-+. ..+-+-+.|.++ ++|.++|.+..+++|-.
T Consensus 77 ~~~~~~y~iieg~~l---~~~~~~------~~~~i~v~p~~~------ggs~v~wt~~y~~~~~~ 126 (155)
T 2flh_A 77 SSHEIGLQVIEGGYL---SQGLSY------YKTTFKLSEIEE------DKTLVNVKISYDHDSDI 126 (155)
T ss_dssp TTTEEEEEEEEEGGG---GTTCSE------EEEEEEEEEEET------TEEEEEEEEEEEC----
T ss_pred CCCEEEEEEEecccc---ccCceE------EEEEEEEEECCC------CCEEEEEEEEEEECCCC
Confidence 32 3455544321 012222 234455667543 47999999999988754
No 128
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=46.73 E-value=1.9e+02 Score=27.28 Aligned_cols=144 Identities=13% Similarity=-0.010 Sum_probs=77.2
Q ss_pred EEEEEEeecCCHHHHHHHHh-cCCCcccccccC-CCCceEEEEee-cCceEEEEEEeccCcCCCCCCCCeEEEEEEEEE-
Q 004240 260 LVKAVGVIDASADTVFEVVL-NLERHQRYEWDM-LTGDLELVDSY-DGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFR- 335 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~-d~~~~~R~~WD~-~~~e~eVVE~l-D~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr- 335 (766)
.+..+..|++||++||+++. +.. ..++|=+ .+.+++++|-= ++.-.|.+..+.+.. .+-.++..-.
T Consensus 18 k~~~ev~i~apa~kvw~~~~~d~~--~lpk~~P~~i~s~~~~eGd~gg~Gsir~~~~~~gg--------~~~~~kErl~~ 87 (166)
T 2i9y_A 18 KLETDVEIKASADKFHHMFAGKPH--HVSKASPGNIQGCDLHEGDWGTVGSIVFWNYVHDG--------EAKVAKERIEA 87 (166)
T ss_dssp EEEEEEEESSCHHHHHGGGSSCSS--CCCCSCSSCCSSCCCCSCCSCSTTCCCEEEEEETT--------EEEEEEEEEEE
T ss_pred EEEEEEEecCCHHHHHHHHhcccc--cccccccccceEEEEEcCCCCCCCeEEEEEEecCC--------CceEEEEEEEE
Confidence 45677789999999999965 543 3789998 88888888752 222224443333210 1222222221
Q ss_pred ccCCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCccccccCCcccchhhhHH
Q 004240 336 GQDGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWCRWKKNSSTKFEKTTHF 415 (766)
Q Consensus 336 ~~dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi~w~p~~~s~~~~~i~~ 415 (766)
.++....+.++-++-+- ..+| +...+-+-+.|.++ .+.|.++|.+..+.++-. .+. + ..+.-
T Consensus 88 iD~~~~~~~y~iieGd~---~~~~---~~~~~ti~v~p~~~-----g~gs~v~wt~~ye~~~~~--~~~--p---~~~~~ 149 (166)
T 2i9y_A 88 VEPDKNLITFRVIEGDL---MKEY---KSFLLTIQVTPKPG-----GPGSIVHWHLEYEKISEE--VAH--P---ETLLQ 149 (166)
T ss_dssp EETTTTEEEEEECCTTG---GGTE---EEEEEEEEEEEEEE-----TTEEEEEEEEEEEESSTT--TCC--T---HHHHH
T ss_pred EeccCcEEEEEEEeCCC---CCCe---eEEEEEEEEEECCC-----CCCcEEEEEEEEEECCCC--CCC--H---HHHHH
Confidence 23333444444444322 1121 23345666777642 147999999999876433 122 1 11112
Q ss_pred HHHHHHHHHHHHhhcC
Q 004240 416 ALLSQVAGLKEYIGAN 431 (766)
Q Consensus 416 ~mL~~Va~LRe~~~a~ 431 (766)
.+......|.+|+.++
T Consensus 150 ~~~~~~k~ie~~l~~~ 165 (166)
T 2i9y_A 150 FCVEVSKEIDEHLLAE 165 (166)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 2233456666666554
No 129
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=43.39 E-value=1.9e+02 Score=29.07 Aligned_cols=48 Identities=8% Similarity=0.079 Sum_probs=33.2
Q ss_pred EeecCCHHHHHHHHhcCCCcccccccCCCCceEEEEeecCc-eEEEEEEec
Q 004240 265 GVIDASADTVFEVVLNLERHQRYEWDMLTGDLELVDSYDGH-YDVVYGTYD 314 (766)
Q Consensus 265 gvVdaspe~Vfe~L~d~~~~~R~~WD~~~~e~eVVE~lD~~-tDIvY~~~k 314 (766)
..|+|||++||.+|.|... -..|=+.+..|++++--++. -.|-+..+.
T Consensus 56 ~~I~ApadkVW~lv~dF~~--l~~w~p~V~s~e~~eGd~g~vGsVR~lt~~ 104 (211)
T 3k3k_A 56 QRIHAPPELVWSIVRRFDK--PQTYKHFIKSCSVEQNFEMRVGCTRDVIVI 104 (211)
T ss_dssp EEESSCHHHHHHHHTCTTC--GGGTCSSEEEEECCTTCCCCTTCEEEEEES
T ss_pred EEEcCCHHHHHHHHhCcCC--hhHcCccceEEEEecCCCCCCCcEEEEEec
Confidence 4689999999999999865 56898887777776532111 235554444
No 130
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=34.44 E-value=1.8e+02 Score=29.72 Aligned_cols=97 Identities=12% Similarity=0.051 Sum_probs=67.4
Q ss_pred CcceeeeEEEEEcccccccccceeeeEEEec-------ceeeeeccCCCCCCCCCcce-eeeecCceeEeeccceeeeCc
Q 004240 44 GYFEYFGWVYHMGTNSIGHEYCHLRFLFIRG-------KYVEMYKRDPHENPGIKPIR-RGVIGPTLMVEELGRRRFNHG 115 (766)
Q Consensus 44 ~~~~~egw~~~~~~~~~g~~~~~~ry~vl~~-------~~~~~yk~~p~~~~~~~pir-~~~i~~~~rv~d~g~~~~~~~ 115 (766)
.....||-+ +++.+| .| +.||.||+- -.|..||.+..-. ...+-| |+.+...|-+|- .....+
T Consensus 7 ~~~v~eg~v-k~r~~K---kW-k~rw~vlrk~s~~adcl~L~vYkd~~dr~-k~~~~KaslsL~~~~GlE~---g~~ldk 77 (224)
T 3ml4_A 7 EAALVEGQV-KLRDGK---KW-KSRWLVLRKPSPVADCLLMLVYKDKCERS-KGLRERSSLTLEDICGLEP---ALPYEG 77 (224)
T ss_dssp CCCSEEEEE-EEC------CC-EEEEEEEECSSTTSSCEEEEEESSSHHHH-SCCCCSEEEEECCEEEEEE---EEEETT
T ss_pred cceeEEEee-eeecCC---ce-eeEEEEEEcCCCchheEEEEEEcChhhhh-cCCcccceeehHHhcCccc---cccccC
Confidence 456678864 455555 66 899999974 1577898776533 123333 588999999883 235566
Q ss_pred eEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHH
Q 004240 116 DVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQA 152 (766)
Q Consensus 116 ~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~ 152 (766)
.-+++.|....+ -..||+.+.|+...|--.|...
T Consensus 78 ~s~TlAIIc~d~---~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 78 LAHTLAIICLSQ---AVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp EEEEEEEEESSC---EEEEECSSHHHHHHHHHHHHHH
T ss_pred cccEEEEEecCc---EEEEEeCCHHHHHHHHHHHhhc
Confidence 778888886544 5599999999999999888664
No 131
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=33.44 E-value=3.3e+02 Score=26.04 Aligned_cols=119 Identities=8% Similarity=-0.099 Sum_probs=65.9
Q ss_pred EEEEEEeecCCHHHHHHHH-hcCCCcccccccCC-CCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 260 LVKAVGVIDASADTVFEVV-LNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L-~d~~~~~R~~WD~~-~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
.+-.+..+.+||+++|.++ .|... -.+.|-+. +.+++++|-=++-=.|.+..+. . + --++--|--..++
T Consensus 10 ~~~~ei~i~apa~kvw~~~v~d~~~-l~pk~~P~~v~s~e~~eGdgg~Gsir~~t~~-g--~-----~~~~kErl~~iD~ 80 (168)
T 3rws_A 10 TSESEYVSSLSAEKLYRGIVEDGNI-IYPKALPRFIEKAETLEGDGGPGTIKKLTFV-G--D-----FGSTKQHIDMVDR 80 (168)
T ss_dssp EEEEEEEESSCHHHHHHHHHTSHHH-HHHHHSTTTEEEEEEEESSSSTTCEEEEEES-S--S-----SCEEEEEEEEEET
T ss_pred EEEEEEEecCCHHHHHHHHhcCccc-cchhhCccccceEEEeeCCCCCCeEEEEEEc-C--C-----CeEEEEEEEEEcc
Confidence 4455667899999999997 77644 35789985 7777777653222235444443 1 1 0133222222232
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCc
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGW 398 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGw 398 (766)
. ...+.++=++-+-.. .. +-+...+-+-+.|.++ .+|.++|.+..+.+|=
T Consensus 81 ~-~~~~sY~iiegd~l~---~~-p~~~y~~ti~v~p~~~------ggs~v~wt~~y~~~~~ 130 (168)
T 3rws_A 81 E-NCAYTYSVYEGIALS---DQ-PLEKIVFEFKLVPTPE------EGCIVKSTTKYYTKGD 130 (168)
T ss_dssp T-TTEEEEEECSSCCBT---TB-CEEEEEEEEEEEECTT------SCEEEEEEEEEEECSS
T ss_pred c-CCEEEEEEEccCccc---Cc-CceEEEEEEEEEECCC------CceEEEEEEEEEECCC
Confidence 2 233333323322111 00 1223445666777553 4799999999999886
No 132
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=32.26 E-value=9.5 Score=41.19 Aligned_cols=8 Identities=38% Similarity=0.787 Sum_probs=0.0
Q ss_pred cccccccc
Q 004240 57 TNSIGHEY 64 (766)
Q Consensus 57 ~~~~g~~~ 64 (766)
.+|+|.+|
T Consensus 325 ~~~~~~~~ 332 (358)
T 2pk2_A 325 LRSLGIDY 332 (358)
T ss_dssp --------
T ss_pred ccccceee
Confidence 45699999
No 133
>3q6a_A Uncharacterized protein; structural genomics, PSI-biology; 1.80A {Staphylococcus saprophyticus subsp}
Probab=30.09 E-value=44 Score=29.78 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=24.4
Q ss_pred EEEEEeecCCHHHHHHHHhcCCCcccccccC
Q 004240 261 VKAVGVIDASADTVFEVVLNLERHQRYEWDM 291 (766)
Q Consensus 261 ~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~ 291 (766)
+..+..|+|||++||+.|.|... ..+|..
T Consensus 3 i~~~~~i~ap~e~Vw~altd~~~--~~~W~~ 31 (135)
T 3q6a_A 3 IITKMQVDVPRETVFEAFVDPEK--IGGFWF 31 (135)
T ss_dssp EEEEEEESSCHHHHHHHHHCTTT--GGGTSS
T ss_pred EEEEEEeCCCHHHHHHHHcCHHH--hcccCC
Confidence 46677899999999999999876 778865
No 134
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=30.02 E-value=5e+02 Score=27.16 Aligned_cols=26 Identities=4% Similarity=0.310 Sum_probs=24.0
Q ss_pred CcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 129 SKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 129 ~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
...+.+.|.|.+|-..|+++|.+|+.
T Consensus 341 ~~~~~l~A~s~~eK~~W~~~i~~~i~ 366 (377)
T 1foe_A 341 ERVFHLCCSSPESRKDFLKSVHSILR 366 (377)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 45689999999999999999999998
No 135
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=27.49 E-value=3.2e+02 Score=25.56 Aligned_cols=120 Identities=10% Similarity=-0.092 Sum_probs=65.0
Q ss_pred EEEEEEeecCCHHHHHHH-HhcCCCcccccccCC-CCceEEEEeecCceEEEEEEeccCcCCCCCCCCeEEEEEEEEEcc
Q 004240 260 LVKAVGVIDASADTVFEV-VLNLERHQRYEWDML-TGDLELVDSYDGHYDVVYGTYDPKYLTRWQSKRDFVFSRQWFRGQ 337 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~-L~d~~~~~R~~WD~~-~~e~eVVE~lD~~tDIvY~~~kp~~lP~~vspRDFV~LRswRr~~ 337 (766)
.+-.+..+.+||+++|.. +.|... -++.|-+. +.++++ |-=++.=.|.+..+.... | . -++-=|--..++
T Consensus 5 ~~~~ei~i~a~a~kvw~~~v~d~~~-l~pk~~P~~v~s~e~-eGdg~~Gsir~~~~~~g~-~----~-~~~kErl~~iD~ 76 (154)
T 2vjg_A 5 SHSLEITSSVSAEKIFSGIVLDVDT-VIPKAATGAYKSVEV-KGDGGAGTVRIITLPEGS-P----I-TTMTVRTDAVNK 76 (154)
T ss_dssp EEEEEEEESSCHHHHHHHHTTTHHH-HHHHHSTTTCSEEEE-ESSSSTTCEEEEECCTTC-S----C-CEEEEEEEEEET
T ss_pred EEEEEEEecCCHHHHHHhhhCCccc-cchhhccCceeEEEE-eCCCCCceEEEEEecCCC-C----c-eEEEEEEEEEec
Confidence 355667789999999998 878755 34789985 677777 542222235555554321 1 0 122222211233
Q ss_pred CCeEEEEEeeccCCCCCCCCCeEeEEEcceeEEEEecCCCCCCCCCceEEEEEEeeecCCcc
Q 004240 338 DGTYTILQFPAVHKKRPPKSGYRRTKINPSTWEIRSLNLPMGSNGAKCLVTQMLEIHSSGWC 399 (766)
Q Consensus 338 dGsYVIa~~SV~Hp~~Pp~~GyVRAei~~sGylI~P~~~~~~~~~~~c~VT~I~qvD~KGwi 399 (766)
.. ..+.++=++-+ ..+. + + +...+-+-+.|.++ .+|.++|.+..+++|-.
T Consensus 77 ~~-~~~~y~iiegd-~l~~-~-~--~~~~~ti~v~p~~~------ggs~v~wt~~y~~~~~~ 126 (154)
T 2vjg_A 77 EA-LSYDSTVIDGD-ILLG-F-I--ESIETHMVVVPTAD------GGSITKTTAIFHTKGDA 126 (154)
T ss_dssp TT-TEEEEEEEESG-GGTT-T-E--EEEEEEEEEEECTT------SCEEEEEEEEEEESTTC
T ss_pred cC-CEEEEEEEecC-CCcc-c-e--EEEEEEEEEEECCC------CcEEEEEEEEEEECCCC
Confidence 22 22222222221 1111 1 1 23344556777543 36999999999988765
No 136
>2leq_A Uncharacterized protein; start domains, structural genomics, PSI-biology, protein STR initiative; NMR {Cytophaga hutchinsonii}
Probab=23.75 E-value=42 Score=29.55 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=25.4
Q ss_pred eEEEEEEeecCCHHHHHHHHhcCCCccccccc
Q 004240 259 VLVKAVGVIDASADTVFEVVLNLERHQRYEWD 290 (766)
Q Consensus 259 ~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD 290 (766)
..+..+..|++||++||+.|.|... ..+|-
T Consensus 5 ~~i~~~~~i~ap~e~Vw~~ltd~~~--~~~W~ 34 (146)
T 2leq_A 5 LIAQVKTVINAPIEKVWEALVNPEI--IKEYM 34 (146)
T ss_dssp EEEEEEEEECSCHHHHHHHHSCTTH--HHHHS
T ss_pred ceEEEEEEECCCHHHHHHHHcCHHH--hceeE
Confidence 4678888999999999999999865 67883
No 137
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=22.34 E-value=5e+02 Score=24.50 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=58.3
Q ss_pred cceeeeEE-EEEcccc-----cccccceeeeEEEec------ceeeeeccCCCCCCCCCcceeee------ecCceeEee
Q 004240 45 YFEYFGWV-YHMGTNS-----IGHEYCHLRFLFIRG------KYVEMYKRDPHENPGIKPIRRGV------IGPTLMVEE 106 (766)
Q Consensus 45 ~~~~egw~-~~~~~~~-----~g~~~~~~ry~vl~~------~~~~~yk~~p~~~~~~~pir~~~------i~~~~rv~d 106 (766)
....||=+ |-.+-+- =+-+| +++-|||.- -.|.+| ..|+.. .|--+.- |-.+++.|
T Consensus 17 e~~kEG~l~~~~~~~~~~~~~~~~~W-~k~RLvL~k~g~G~~y~LEfy-~PPkss---KpK~~i~cs~I~EVR~tt~LE- 90 (136)
T 1v5m_A 17 DIQREGALRFMVADDAASGPGGTAQW-QKCRLLLRRAVAGERFRLEFF-VPPKAS---RPKVSIPLSAIIEVRTTMPLE- 90 (136)
T ss_dssp SCCEEEEEEEEECSCCCSSSCCSCCC-EEEEEEEEECSSSCCEEEEEE-SSTTSS---SCSSCEETTTCCBCCCCCCSS-
T ss_pred eeeeeeeeeeecccccccccCcccch-hheeeEEEEccCCCceEEEEe-cCCccc---CCccccchhhhhhhhhccccc-
Confidence 33456655 5555443 22344 455555432 578899 455443 2322221 22344432
Q ss_pred ccceeeeCceEEEEEEeecCCcCcceeeeccCHHHHHHHHHHHHHHHH
Q 004240 107 LGRRRFNHGDVYVMRLYNRLDESKKGEIACATAGEARKWMEAFDQAKQ 154 (766)
Q Consensus 107 ~g~~~~~~~~~yv~~~yn~~~~~~~~~~aa~~~eea~~W~~~~~~~~~ 154 (766)
..-.--.||+.+.|.. .+-|.|.+.++..-|...|+.|+.
T Consensus 91 ----mPD~~nTFVlK~~n~~----eyi~ea~d~~q~~sWla~Ir~C~~ 130 (136)
T 1v5m_A 91 ----MPEKDNTFVLKVENGA----EYILETIDSLQKHSWVADIQGCVD 130 (136)
T ss_dssp ----SCCCTTEECCBCTTSC----BEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ----cCCccceEEEEecCCc----EEEEEcCCHHHHHHHHHHHHhhcC
Confidence 4445567899877744 578999999999999999999976
No 138
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=20.98 E-value=82 Score=29.32 Aligned_cols=31 Identities=6% Similarity=0.110 Sum_probs=27.1
Q ss_pred eEEEEEEeecCCHHHHHHHHhcCCCcccccccC
Q 004240 259 VLVKAVGVIDASADTVFEVVLNLERHQRYEWDM 291 (766)
Q Consensus 259 ~~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~WD~ 291 (766)
..+..+..|++||++||+.|.+... ..+|-.
T Consensus 13 ~~i~~~~~i~Ap~e~Vw~altdp~~--~~~W~~ 43 (164)
T 3pu2_A 13 TRLEFRRHFAATPEQLWAALTSPAL--LPAWLF 43 (164)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCTTT--GGGTSC
T ss_pred ceEEEEEEECCCHHHHHHHhcCHHH--HhhEeC
Confidence 5788899999999999999999876 778865
No 139
>2l8o_A Uncharacterized protein; mixed alpha-beta protein, PSI-biology, structural genomics, structure initiative; NMR {Cytophaga hutchinsonii}
Probab=20.80 E-value=33 Score=31.23 Aligned_cols=28 Identities=11% Similarity=0.184 Sum_probs=24.0
Q ss_pred EEEEEEeecCCHHHHHHHHhcCCCcccccc
Q 004240 260 LVKAVGVIDASADTVFEVVLNLERHQRYEW 289 (766)
Q Consensus 260 ~~Ka~gvVdaspe~Vfe~L~d~~~~~R~~W 289 (766)
.+..+..|+|||++||+.|.|.+. ..+|
T Consensus 3 ~i~~~~~i~Ap~e~Vw~altdpe~--~~~W 30 (144)
T 2l8o_A 3 KITVEVTVYAAIEKVWKYWNEPAH--IMKW 30 (144)
T ss_dssp SEEEEEEECSCHHHHHHHHHCHHH--HHHH
T ss_pred EEEEEEEECCCHHHHHHHHCCHHH--Hhhc
Confidence 467788899999999999999865 6778
Done!