Query 004241
Match_columns 766
No_of_seqs 539 out of 4068
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 18:48:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 8.7E-78 3E-82 705.7 39.8 558 88-762 7-626 (632)
2 1ots_A Voltage-gated CLC-type 100.0 3.6E-65 1.2E-69 576.3 43.1 418 88-564 32-450 (465)
3 3nd0_A SLL0855 protein; CLC fa 100.0 4.5E-65 1.5E-69 573.5 40.8 425 78-564 17-442 (466)
4 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 2.1E-64 7.3E-69 566.7 44.6 414 88-563 17-434 (446)
5 4esy_A CBS domain containing m 99.8 1.1E-18 3.8E-23 170.3 13.2 132 619-762 13-163 (170)
6 3org_A CMCLC; transporter, tra 99.8 4.1E-18 1.4E-22 199.8 20.4 191 348-551 9-210 (632)
7 3lv9_A Putative transporter; C 99.7 1.7E-17 5.8E-22 157.8 14.8 124 620-761 19-145 (148)
8 3kpb_A Uncharacterized protein 99.7 1.6E-17 5.4E-22 152.1 12.5 121 624-762 1-121 (122)
9 3i8n_A Uncharacterized protein 99.7 1.8E-17 6.1E-22 154.1 11.5 123 621-760 3-128 (130)
10 3nqr_A Magnesium and cobalt ef 99.7 1.2E-17 4.2E-22 154.5 10.0 121 623-760 2-125 (127)
11 2ef7_A Hypothetical protein ST 99.7 4.6E-17 1.6E-21 151.5 13.8 125 622-762 2-126 (133)
12 3hf7_A Uncharacterized CBS-dom 99.7 4.9E-17 1.7E-21 151.3 13.4 123 624-761 2-127 (130)
13 3jtf_A Magnesium and cobalt ef 99.7 2.3E-17 7.9E-22 153.2 10.9 121 622-761 3-126 (129)
14 3k6e_A CBS domain protein; str 99.7 3.1E-17 1.1E-21 158.0 11.9 126 623-761 14-142 (156)
15 3gby_A Uncharacterized protein 99.7 1.6E-17 5.5E-22 153.9 9.3 124 622-761 3-126 (128)
16 3lhh_A CBS domain protein; str 99.7 8.2E-17 2.8E-21 157.5 14.4 126 619-762 37-165 (172)
17 2p9m_A Hypothetical protein MJ 99.7 5.6E-17 1.9E-21 151.8 12.6 127 620-761 4-136 (138)
18 3lfr_A Putative metal ION tran 99.7 2.9E-17 9.8E-22 154.1 10.1 123 623-761 2-127 (136)
19 2rih_A Conserved protein with 99.7 1.1E-16 3.6E-21 150.9 13.9 122 623-760 4-127 (141)
20 3fhm_A Uncharacterized protein 99.7 1E-16 3.4E-21 155.5 13.7 132 617-762 17-151 (165)
21 1pbj_A Hypothetical protein; s 99.7 1.6E-16 5.3E-21 146.0 14.1 123 624-762 1-123 (125)
22 2yzi_A Hypothetical protein PH 99.7 1.6E-16 5.6E-21 148.7 13.5 126 621-762 4-130 (138)
23 3oco_A Hemolysin-like protein 99.7 9.4E-17 3.2E-21 153.7 11.8 125 620-762 16-144 (153)
24 3lqn_A CBS domain protein; csg 99.7 5.4E-17 1.9E-21 154.4 10.0 132 618-762 9-144 (150)
25 1y5h_A Hypothetical protein RV 99.7 6.8E-17 2.3E-21 150.4 10.1 127 620-761 4-131 (133)
26 3k2v_A Putative D-arabinose 5- 99.7 2E-16 6.9E-21 150.6 13.1 120 623-757 27-148 (149)
27 2o16_A Acetoin utilization pro 99.7 2.1E-16 7.3E-21 152.4 13.5 128 622-761 3-135 (160)
28 4gqw_A CBS domain-containing p 99.7 1.1E-16 3.7E-21 152.0 10.6 129 622-761 3-143 (152)
29 3fv6_A YQZB protein; CBS domai 99.7 4.8E-16 1.7E-20 149.7 14.8 131 618-761 11-144 (159)
30 3oi8_A Uncharacterized protein 99.7 1.4E-16 4.7E-21 153.2 9.6 121 619-757 33-156 (156)
31 3ctu_A CBS domain protein; str 99.7 3.3E-16 1.1E-20 150.1 11.9 132 618-762 9-143 (156)
32 3sl7_A CBS domain-containing p 99.7 1.5E-16 5.1E-21 155.8 9.5 128 623-761 3-156 (180)
33 2d4z_A Chloride channel protei 99.7 6.1E-16 2.1E-20 160.3 14.4 136 620-761 9-246 (250)
34 2rc3_A CBS domain; in SITU pro 99.7 5.8E-16 2E-20 144.5 12.7 123 625-762 7-132 (135)
35 3kxr_A Magnesium transporter, 99.7 4E-16 1.4E-20 157.2 12.1 122 621-762 51-175 (205)
36 1ots_A Voltage-gated CLC-type 99.6 1.6E-15 5.6E-20 171.0 17.8 193 348-559 34-239 (465)
37 1pvm_A Conserved hypothetical 99.6 7.9E-16 2.7E-20 152.0 13.4 125 624-761 9-133 (184)
38 2uv4_A 5'-AMP-activated protei 99.6 1E-15 3.6E-20 146.1 13.6 136 617-761 16-151 (152)
39 1yav_A Hypothetical protein BS 99.6 3.8E-16 1.3E-20 150.2 10.4 131 619-762 9-143 (159)
40 1o50_A CBS domain-containing p 99.6 1.2E-15 4E-20 146.6 13.8 131 619-762 11-154 (157)
41 3ocm_A Putative membrane prote 99.6 1E-15 3.6E-20 149.9 13.5 125 619-762 31-158 (173)
42 2j9l_A Chloride channel protei 99.6 9.7E-16 3.3E-20 150.8 13.0 133 618-762 5-166 (185)
43 2pfi_A Chloride channel protei 99.6 1.2E-15 4.2E-20 146.9 13.3 135 621-761 10-147 (164)
44 2emq_A Hypothetical conserved 99.6 6.7E-16 2.3E-20 147.9 11.3 131 619-762 6-140 (157)
45 3nd0_A SLL0855 protein; CLC fa 99.6 3.7E-15 1.3E-19 167.5 19.0 193 348-560 30-235 (466)
46 2nyc_A Nuclear protein SNF4; b 99.6 1.6E-15 5.5E-20 142.7 13.4 132 623-761 7-141 (144)
47 4ene_A CLC-EC1, H(+)/CL(-) exc 99.6 1.2E-14 4.1E-19 163.0 20.4 193 348-560 19-225 (446)
48 4fry_A Putative signal-transdu 99.6 2.2E-15 7.4E-20 144.5 12.4 124 624-762 7-136 (157)
49 3l2b_A Probable manganase-depe 99.6 1.1E-15 3.8E-20 158.1 11.0 128 623-761 6-244 (245)
50 1vr9_A CBS domain protein/ACT 99.6 3.7E-15 1.3E-19 151.0 11.6 119 623-761 12-130 (213)
51 3ddj_A CBS domain-containing p 99.6 1.3E-14 4.5E-19 153.9 13.5 130 622-762 154-286 (296)
52 2oux_A Magnesium transporter; 99.6 6.1E-15 2.1E-19 156.3 10.5 122 621-762 134-260 (286)
53 2yvy_A MGTE, Mg2+ transporter 99.5 1.5E-14 5.2E-19 152.6 11.7 122 621-762 132-258 (278)
54 3t4n_C Nuclear protein SNF4; C 99.5 5.3E-14 1.8E-18 151.2 15.9 134 621-761 184-320 (323)
55 2yzq_A Putative uncharacterize 99.5 2.4E-14 8.4E-19 150.4 12.2 130 622-762 124-280 (282)
56 3kh5_A Protein MJ1225; AMPK, A 99.5 4.5E-14 1.6E-18 148.0 12.0 125 623-759 147-279 (280)
57 3pc3_A CG1753, isoform A; CBS, 99.5 3.7E-14 1.3E-18 163.1 11.9 133 618-762 378-512 (527)
58 3kh5_A Protein MJ1225; AMPK, A 99.5 1.6E-13 5.4E-18 143.8 14.2 122 623-760 83-204 (280)
59 3ddj_A CBS domain-containing p 99.5 8.1E-14 2.8E-18 147.8 11.8 122 623-760 92-213 (296)
60 2zy9_A Mg2+ transporter MGTE; 99.5 7.8E-14 2.7E-18 157.8 11.4 121 621-761 152-277 (473)
61 2qrd_G Protein C1556.08C; AMPK 99.5 3.3E-13 1.1E-17 145.7 14.8 134 622-762 180-316 (334)
62 2yzq_A Putative uncharacterize 99.5 9E-14 3.1E-18 146.1 9.0 117 624-760 1-118 (282)
63 3t4n_C Nuclear protein SNF4; C 99.4 8.5E-13 2.9E-17 141.7 12.5 127 624-761 114-248 (323)
64 2v8q_E 5'-AMP-activated protei 99.4 1.9E-12 6.3E-17 139.6 13.3 134 617-760 28-176 (330)
65 3usb_A Inosine-5'-monophosphat 99.4 1.3E-12 4.3E-17 148.9 11.9 124 620-761 109-234 (511)
66 2v8q_E 5'-AMP-activated protei 99.4 1.4E-12 4.8E-17 140.5 11.7 132 624-762 190-324 (330)
67 4fxs_A Inosine-5'-monophosphat 99.3 4.1E-13 1.4E-17 152.3 3.5 120 624-761 89-209 (496)
68 1me8_A Inosine-5'-monophosphat 99.3 1.8E-13 6.2E-18 156.0 -0.1 124 620-761 92-221 (503)
69 2qrd_G Protein C1556.08C; AMPK 99.3 1.4E-11 4.9E-16 132.7 12.6 123 628-761 111-243 (334)
70 1zfj_A Inosine monophosphate d 99.3 1.2E-11 4.2E-16 140.9 11.9 120 624-761 90-211 (491)
71 4avf_A Inosine-5'-monophosphat 99.3 4.6E-13 1.6E-17 151.8 -0.1 119 623-760 87-206 (490)
72 4af0_A Inosine-5'-monophosphat 99.2 9.1E-13 3.1E-17 146.1 0.1 115 626-760 140-257 (556)
73 1vrd_A Inosine-5'-monophosphat 99.2 1.1E-12 3.8E-17 149.5 -0.0 122 624-762 95-216 (494)
74 2cu0_A Inosine-5'-monophosphat 99.1 1.3E-11 4.5E-16 140.2 -0.0 115 624-760 93-207 (486)
75 1jcn_A Inosine monophosphate d 99.1 3.9E-12 1.3E-16 145.7 -5.5 123 624-761 108-233 (514)
76 3ghd_A A cystathionine beta-sy 98.7 1.5E-08 5.2E-13 83.2 6.7 65 633-700 1-65 (70)
77 1vr9_A CBS domain protein/ACT 98.7 1.4E-08 4.9E-13 102.3 7.8 102 623-737 71-172 (213)
78 3fio_A A cystathionine beta-sy 98.4 2.5E-07 8.6E-12 75.2 6.3 65 633-700 1-65 (70)
79 4esy_A CBS domain containing m 98.3 5.7E-07 1.9E-11 86.9 6.6 58 691-759 17-74 (170)
80 3ghd_A A cystathionine beta-sy 98.2 2.1E-06 7.2E-11 70.3 7.4 46 708-759 2-47 (70)
81 3lhh_A CBS domain protein; str 98.1 2E-06 6.8E-11 83.3 6.1 61 691-760 41-102 (172)
82 3kpb_A Uncharacterized protein 98.1 3.2E-06 1.1E-10 76.3 6.7 58 624-681 62-119 (122)
83 4gqw_A CBS domain-containing p 98.1 4.1E-06 1.4E-10 78.5 6.6 61 622-682 83-143 (152)
84 2ef7_A Hypothetical protein ST 98.1 5.6E-06 1.9E-10 75.9 7.4 60 623-682 66-125 (133)
85 3lv9_A Putative transporter; C 98.1 6.7E-06 2.3E-10 77.1 8.1 58 623-681 87-144 (148)
86 3k6e_A CBS domain protein; str 98.0 3.3E-06 1.1E-10 80.6 5.3 61 620-682 82-142 (156)
87 3jtf_A Magnesium and cobalt ef 98.0 8.5E-06 2.9E-10 74.6 7.9 59 622-681 67-125 (129)
88 3kxr_A Magnesium transporter, 98.0 7.6E-06 2.6E-10 81.8 8.1 61 622-682 114-174 (205)
89 3sl7_A CBS domain-containing p 98.0 5.1E-06 1.8E-10 80.3 6.7 61 622-682 96-156 (180)
90 3fio_A A cystathionine beta-sy 98.0 1E-05 3.4E-10 65.5 7.4 47 708-760 2-48 (70)
91 3nqr_A Magnesium and cobalt ef 98.0 5.9E-06 2E-10 75.4 6.7 58 622-680 67-124 (127)
92 3oco_A Hemolysin-like protein 98.0 8.7E-06 3E-10 76.9 7.8 59 623-682 85-143 (153)
93 3i8n_A Uncharacterized protein 98.0 6.5E-06 2.2E-10 75.5 6.6 58 623-681 71-128 (130)
94 3hf7_A Uncharacterized CBS-dom 98.0 6.5E-06 2.2E-10 75.6 6.6 58 623-681 69-126 (130)
95 3lqn_A CBS domain protein; csg 98.0 1.2E-05 4E-10 75.5 8.4 60 621-682 84-143 (150)
96 3l2b_A Probable manganase-depe 98.0 7.2E-06 2.5E-10 84.0 7.2 59 691-760 6-64 (245)
97 3gby_A Uncharacterized protein 98.0 7E-06 2.4E-10 75.0 6.3 60 690-761 3-62 (128)
98 3lfr_A Putative metal ION tran 98.0 9.3E-06 3.2E-10 75.1 7.1 59 622-681 68-126 (136)
99 2rc3_A CBS domain; in SITU pro 98.0 8.3E-06 2.9E-10 75.0 6.5 60 622-682 72-131 (135)
100 1o50_A CBS domain-containing p 98.0 7.1E-06 2.4E-10 77.8 6.2 60 622-682 94-153 (157)
101 1pbj_A Hypothetical protein; s 98.0 9.2E-06 3.1E-10 73.4 6.5 59 622-681 63-121 (125)
102 2p9m_A Hypothetical protein MJ 98.0 8.8E-06 3E-10 75.0 6.3 60 622-681 71-135 (138)
103 2rih_A Conserved protein with 97.9 1.2E-05 4.3E-10 74.5 6.9 58 692-760 5-64 (141)
104 2d4z_A Chloride channel protei 97.9 8.3E-06 2.8E-10 84.1 6.1 62 690-760 11-72 (250)
105 2yzi_A Hypothetical protein PH 97.9 1.5E-05 5.3E-10 73.4 7.3 56 691-757 6-61 (138)
106 2nyc_A Nuclear protein SNF4; b 97.9 1.2E-05 4E-10 74.6 6.5 60 623-682 76-141 (144)
107 3fv6_A YQZB protein; CBS domai 97.9 1.1E-05 3.7E-10 76.8 6.4 61 622-682 79-144 (159)
108 2uv4_A 5'-AMP-activated protei 97.9 1.6E-05 5.4E-10 74.9 7.5 58 623-680 86-149 (152)
109 2o16_A Acetoin utilization pro 97.9 1.3E-05 4.5E-10 76.3 6.5 58 691-759 4-61 (160)
110 2emq_A Hypothetical conserved 97.9 2.6E-05 8.8E-10 73.6 8.3 60 621-682 80-139 (157)
111 3k2v_A Putative D-arabinose 5- 97.9 2.3E-05 8E-10 73.5 7.3 61 692-761 28-88 (149)
112 3ctu_A CBS domain protein; str 97.8 1.5E-05 5.2E-10 75.3 6.0 61 691-760 14-74 (156)
113 3fhm_A Uncharacterized protein 97.8 1.8E-05 6.1E-10 75.8 6.5 61 621-682 90-150 (165)
114 4fry_A Putative signal-transdu 97.8 1.4E-05 4.9E-10 75.5 5.7 60 622-682 76-135 (157)
115 2j9l_A Chloride channel protei 97.8 2.6E-05 9E-10 75.7 7.5 61 621-682 105-165 (185)
116 1y5h_A Hypothetical protein RV 97.8 1.5E-05 5.3E-10 72.9 5.5 55 692-757 8-62 (133)
117 1pvm_A Conserved hypothetical 97.8 1.6E-05 5.5E-10 77.6 5.8 60 622-681 73-132 (184)
118 3oi8_A Uncharacterized protein 97.8 2.9E-05 9.8E-10 73.7 6.8 55 622-677 101-155 (156)
119 3ocm_A Putative membrane prote 97.8 3.4E-05 1.2E-09 74.8 7.1 80 668-760 16-96 (173)
120 2pfi_A Chloride channel protei 97.8 3.3E-05 1.1E-09 73.3 6.8 61 691-760 12-72 (164)
121 1yav_A Hypothetical protein BS 97.8 2.7E-05 9.3E-10 73.9 6.0 60 621-682 83-142 (159)
122 1me8_A Inosine-5'-monophosphat 97.7 7.6E-06 2.6E-10 93.0 1.7 100 622-734 159-260 (503)
123 3usb_A Inosine-5'-monophosphat 97.7 9.1E-05 3.1E-09 84.2 10.4 103 622-736 173-276 (511)
124 2yvy_A MGTE, Mg2+ transporter 97.7 3.8E-05 1.3E-09 80.3 6.5 61 622-682 197-257 (278)
125 2oux_A Magnesium transporter; 97.7 4.5E-05 1.5E-09 80.2 7.0 61 622-682 199-259 (286)
126 2zy9_A Mg2+ transporter MGTE; 97.6 8.4E-05 2.9E-09 83.8 7.9 61 622-682 217-277 (473)
127 3pc3_A CG1753, isoform A; CBS, 97.4 0.00013 4.5E-09 83.5 5.8 59 691-760 383-443 (527)
128 1zfj_A Inosine monophosphate d 97.0 0.00088 3E-08 75.9 7.7 61 622-682 150-211 (491)
129 2cu0_A Inosine-5'-monophosphat 97.0 0.00017 5.9E-09 81.6 1.6 101 622-737 148-248 (486)
130 4af0_A Inosine-5'-monophosphat 96.8 0.00017 5.8E-09 80.4 0.0 59 623-681 199-257 (556)
131 1vrd_A Inosine-5'-monophosphat 96.8 0.00049 1.7E-08 78.0 3.2 59 623-681 154-214 (494)
132 4avf_A Inosine-5'-monophosphat 96.8 0.00054 1.8E-08 77.4 3.3 60 622-681 145-206 (490)
133 4fxs_A Inosine-5'-monophosphat 96.7 0.0015 5.1E-08 73.9 6.6 53 693-756 90-142 (496)
134 1jcn_A Inosine monophosphate d 96.1 0.00054 1.9E-08 78.0 -2.1 59 622-680 171-231 (514)
135 3k2t_A LMO2511 protein; lister 24.4 1.2E+02 0.004 23.1 4.8 33 640-672 12-44 (57)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=8.7e-78 Score=705.71 Aligned_cols=558 Identities=19% Similarity=0.243 Sum_probs=424.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 004241 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYALSL 167 (766)
Q Consensus 88 ~~~~~l~~~lvG~l~Gl~a~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggl~~g~l~~~~~~~~~ 167 (766)
..+++++++++|+++|+++++|+.+++++++++..... +... ...|+.++++|++++++++++.++. .
T Consensus 7 ~~r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~----~ 74 (632)
T 3org_A 7 LLRLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISR-----LAGR---FAGYILYVVSGVALCLLSTFWCAVL----S 74 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HSCH---HHHHHHHHHHHHHHHHHHHHHHHHS----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hhhh---hHHHHHHHHHHHHHHHHHHHHHHhc----C
Confidence 45678899999999999999999999999887532110 0000 1234446678999999888875431 2
Q ss_pred CCCCCcchhhccccCCCCCCCcccccccchhhhhcccCCCCccccchhhhhhHHHHHHHHHHHHhhcCCccCCchhHHHH
Q 004241 168 DDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVEI 247 (766)
Q Consensus 168 ~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~k~~~~~lslgsG~s~G~EGP~v~i 247 (766)
+...|+||||+++... +. .. +.++..++++.+.|++++++++++|+|+|||||++|+
T Consensus 75 p~a~GsGIp~v~~~l~--g~-------------------~~--~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqi 131 (632)
T 3org_A 75 TEAEGSGLPQMKSILS--GF-------------------YD--KMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHI 131 (632)
T ss_dssp GGGCBCSHHHHHHHTT--TT-------------------HH--HHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHH
T ss_pred CccCCCCHHHHHHHHh--Cc-------------------cc--cccccccHHHHHHHHHHHHHHHhcCCCccccchHHHH
Confidence 3346788999975321 00 00 0234566788999999999999999999999999999
Q ss_pred HHHHHHHHhh--hhC---CCchhhHHHHhhhhhHHHHHhhcchhHHHHHHHHhhccccccccchhhhhhHHHHHHHHHHH
Q 004241 248 GKSIAKGVGN--LFD---RRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVI 322 (766)
Q Consensus 248 Ga~ig~~l~~--~~~---~~~~~~r~l~~~G~aAGiaa~F~aPi~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~~~aa~~ 322 (766)
||++|+++++ +|+ .+++++|++++||+|||+||+|||||||++|++|+++.++ +.+++++ ++++|++
T Consensus 132 Ga~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~-------~~~~~~~-~~~as~~ 203 (632)
T 3org_A 132 ACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIETIASFY-------LVQAFWK-GVLSALS 203 (632)
T ss_dssp HHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEE-------ETTHHHH-HHHHHHH
T ss_pred HHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHH-------hHHHHHH-HHHHHHH
Confidence 9999999999 877 5788999999999999999999999999999999997542 2244454 5789999
Q ss_pred HHHHHHhhcCCCC---ccccC---cCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHH
Q 004241 323 ASVVSEVGLGSEP---AFKVP---EYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMG 396 (766)
Q Consensus 323 a~~v~~~~~g~~~---~f~~~---~~~~~~~~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 396 (766)
|+++++.+.++.. +|... +.+ +++.|+ +++++|++||++|.+|++++.++.++ +..+..+.++++++.++
T Consensus 204 a~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l-~~~~lGi~~Gl~g~~f~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 279 (632)
T 3org_A 204 GAIVYELLYTTPLVEAFEGTNFDASDV-SRTQTL-LYAILGALMGVLGALFIRCVRSIYEL--RMRHYPGTNRYFLVGVV 279 (632)
T ss_dssp HHHHTTC------------------CC-CCSCTH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHSSTTCCTHHHHHHH
T ss_pred HHHHHHHhccCccccccccccccccCC-CcHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcchhHHHHHHHH
Confidence 9998876544332 23211 222 256788 99999999999999999998877654 22222334567888888
Q ss_pred HHHHHHHHHHhcccccC--CHHHHHHHHccCCCcc--cccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhH
Q 004241 397 GLAVGLIALMFPEILYW--GFENVDILLESRPFVK--GLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGM 472 (766)
Q Consensus 397 gllvg~i~~~~P~~~g~--G~~~i~~ll~~~~~~~--~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~ 472 (766)
+++++ .+.+|+..|. |++.++.++++..+.. ......++.++++|+++|++|+|+|+|||+|+|++++||++|+
T Consensus 280 ~~~~~--~l~~p~~~g~~~~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~ 357 (632)
T 3org_A 280 ALFAS--ALQYPFRLFALDPRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGR 357 (632)
T ss_dssp HHHHH--HHTTTC------CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHhcCCcHHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHH
Confidence 87776 3568988765 5888888887653211 1122245667899999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCccccccccccchHHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhh
Q 004241 473 AYGKFINFAIAQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQ 552 (766)
Q Consensus 473 ~~g~~~~~~~~~~~~~~~~~~~~~~~p~~~alvGaaa~lag~~~aPls~~viv~Eltg~~~~llP~mia~~va~~v~~~~ 552 (766)
++|.+++.++|. ..+|+.||++||||+++|++|+|++++ |++|+||++++++|+|+++++|+++++.+
T Consensus 358 ~~g~~~~~~~p~-----------~~~p~~~a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~ 425 (632)
T 3org_A 358 LYGELMRVVFGN-----------AIVPGSYAVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAF 425 (632)
T ss_dssp HHHHHHHHHHCT-----------TSCHHHHHHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCc-----------ccchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHh
Confidence 999999877764 257899999999999999999999875 89999999999999999999999998865
Q ss_pred ccCCcchhhHHHhhhccccccchhhccccccCCCCccccccchhhhhhhhhhccccccccchhhhhhhccccccccccc-
Q 004241 553 MRRRDVKETKVAVHANTNRKRQFEIYTSRTRGLSSSDLLAEEEPYAINLCEVESSLCIDDWNLEVEELKRRVFVSEVMR- 631 (766)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~l~~~~~~~~~l~~~~s~~~~~d~~~~~~~~l~~~~V~diM~- 631 (766)
++++||..... +++| +.++ . ..+..++++|+|+|+
T Consensus 426 --~~~iY~~~~~~----------k~lp-----------------~l~~------------~---~~~~~~~~~V~diM~p 461 (632)
T 3org_A 426 --NRSLYETLVLM----------KHLP-----------------YMPI------------L---RRDRSPEMTAREIMHP 461 (632)
T ss_dssp --CCCHHHHHHHH----------TTCC-----------------EEEE------------E---CTTCCTTSBHHHHCBC
T ss_pred --CCCHHHHHHHh----------cCCC-----------------cccc------------c---cccccccCcHHHHhhc
Confidence 47999986532 2222 1100 0 012237789999999
Q ss_pred -cceeEEeCCccHHHHHHHHH-HcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhc----------------------
Q 004241 632 -TRYVTVLMTTLLIEALTLML-AEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT---------------------- 687 (766)
Q Consensus 632 -~~~~~V~~~~tl~eal~~m~-~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~---------------------- 687 (766)
+++.+++++++++|+.+.|. +++++.+||+|++++++|+||++|+++.+.+.....
T Consensus 462 ~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 541 (632)
T 3org_A 462 IEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENI 541 (632)
T ss_dssp TTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTTCBBCCEESHHHHTTTTTTC--------------------------
T ss_pred CCCceEecCCCcHHHHHHHHHhcCCcceEEEEecCCeEEEEEEHHHHHHHHHHHhhhcccccccccceeccCHHHHHhhc
Confidence 89999999999999999999 799999999999999999999999987653211000
Q ss_pred -c---------------------ccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCc
Q 004241 688 -S---------------------RSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQ 745 (766)
Q Consensus 688 -~---------------------~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~ 745 (766)
. .+..+++|+|++ ++.++++|+++.|+.++|.+++.+++||+| +|+
T Consensus 542 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~------~pitV~~~~~l~ea~~~M~~~~i~~lpVve------~G~ 609 (632)
T 3org_A 542 EGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDV------SPIVVTSYSLVRQLHFLFVMLMPSMIYVTE------RGK 609 (632)
T ss_dssp -----------------------------CCSCCC------CCCEEETTCBHHHHHHHHHHTCCSEEEEEE------TTE
T ss_pred ccCCCCCcccchhhhcccceEeeccccccchhhcC------CCceecCCCcHHHHHHHHHhcCCCEEEEEE------CCE
Confidence 0 001136778887 899999999999999999999999999994 799
Q ss_pred EEEEEeHHHHHHHhhcc
Q 004241 746 LVGLLDRESIILACRFC 762 (766)
Q Consensus 746 lvGIVt~~DIl~~~~~~ 762 (766)
++|+||++|+++++.++
T Consensus 610 lvGIVT~~Dll~~~~~~ 626 (632)
T 3org_A 610 LVGIVEREDVAYGYSNS 626 (632)
T ss_dssp EEEEEEGGGTEECCCC-
T ss_pred EEEEEehhhHHHHHhhh
Confidence 99999999999988765
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=100.00 E-value=3.6e-65 Score=576.34 Aligned_cols=418 Identities=22% Similarity=0.343 Sum_probs=349.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 004241 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVSILNQLRYALSL 167 (766)
Q Consensus 88 ~~~~~l~~~lvG~l~Gl~a~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggl~~g~l~~~~~~~~~ 167 (766)
.+.++++++++|+++|+++.+|+++++++++++++..+... .....+|+.++++|+++|++++++.+.. .
T Consensus 32 ~~~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ll~~~l~~~~----~ 101 (465)
T 1ots_A 32 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA------DNYPLLLTVAFLCSAVLAMFGYFLVRKY----A 101 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS------SSHHHHHHHHHHHHHHHHHHHHHHHHHH----C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------cccccHHHHHHHHHHHHHHHHHHHHHHh----C
Confidence 35678999999999999999999999999999987532110 0011234445688999999998876422 1
Q ss_pred CCCCCcchhhccccCCCCCCCcccccccchhhhhcccCCCCccccchhhhhhHHHHHHHHHHHHhhcCCccCCchhHHHH
Q 004241 168 DDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPSVEI 247 (766)
Q Consensus 168 ~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~k~~~~~lslgsG~s~G~EGP~v~i 247 (766)
+...|+|+||+++.... .+.....++.+.|++++++++++|+|+|||||++|+
T Consensus 102 p~a~GsGip~v~~~l~~---------------------------~~~~~~~r~~~~k~~~~~lti~sG~s~GrEGP~vqi 154 (465)
T 1ots_A 102 PEAGGSGIPEIEGALED---------------------------QRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQI 154 (465)
T ss_dssp GGGSSCSHHHHHHHHTT---------------------------CSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHHHHH
T ss_pred ccccCCChHHHHHHHhC---------------------------CCCCCcHHHHHHHHHHHHHHHhcCCCcCCcchHHHH
Confidence 22346779998753210 011233567789999999999999999999999999
Q ss_pred HHHHHHHHhhhhCC-CchhhHHHHhhhhhHHHHHhhcchhHHHHHHHHhhccccccccchhhhhhHHHHHHHHHHHHHHH
Q 004241 248 GKSIAKGVGNLFDR-RPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIASVV 326 (766)
Q Consensus 248 Ga~ig~~l~~~~~~-~~~~~r~l~~~G~aAGiaa~F~aPi~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~v 326 (766)
|+++|++++|++++ +++++|++++||+|||+||+||||++|++|++|++..++.. ..+.+.+ ++++|++|+++
T Consensus 155 Ga~ig~~l~~~~~l~~~~~~r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~-----~~~~~~~-~~~as~~a~~v 228 (465)
T 1ots_A 155 GGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRY-----TLISIKA-VFIGVIMSTIM 228 (465)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSC-----CCCCHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcch-----HHHHHHH-HHHHHHHHHHH
Confidence 99999999999995 89999999999999999999999999999999999754321 1122454 67899999999
Q ss_pred HHhhcCCCCccccCcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHHHHH
Q 004241 327 SEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLIALM 406 (766)
Q Consensus 327 ~~~~~g~~~~f~~~~~~~~~~~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lggllvg~i~~~ 406 (766)
++.++|+++.|.++.++..++.+++.++++|++||++|.+|++++.+..++++++.+..+++++++++++|+++++++++
T Consensus 229 ~~~~~G~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~i~gl~~g~l~~~ 308 (465)
T 1ots_A 229 YRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFV 308 (465)
T ss_dssp HHHHSCSCCSSCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCceeecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHHHHHHHHHHHH
Confidence 99989999999988777667789999999999999999999999988888776654322223347899999999999999
Q ss_pred hcccccCCHHHHHHHHccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHHHHHHhhhcCC
Q 004241 407 FPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSN 486 (766)
Q Consensus 407 ~P~~~g~G~~~i~~ll~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~ 486 (766)
+|+.+|+|++.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|++++.++|.
T Consensus 309 ~P~~lG~G~~~i~~~~~~~-----~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~-- 381 (465)
T 1ots_A 309 APATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQ-- 381 (465)
T ss_dssp CGGGSSCSTTHHHHHHHTC-----SCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGG--
T ss_pred hHhhcCChHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCc--
Confidence 9999999999999999864 456677888999999999999999999999999999999999999999987775
Q ss_pred CccccccccccchHHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhccCCcchhhHHH
Q 004241 487 PTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKVA 564 (766)
Q Consensus 487 ~~~~~~~~~~~~p~~~alvGaaa~lag~~~aPls~~viv~Eltg~~~~llP~mia~~va~~v~~~~~~~~~~~~~~~~ 564 (766)
...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++.+ .++++|+....
T Consensus 382 --------~~~~~~~~alvGmaa~~a~v~raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~-~~~~iY~~~l~ 450 (465)
T 1ots_A 382 --------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFT-GGKPLYSAILA 450 (465)
T ss_dssp --------GTCCHHHHHHHHHTHHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTT-TCCCHHHHHHH
T ss_pred --------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh-CCCChHHHHHH
Confidence 3468999999999999999999999999999999999999999999999999988654 57899998653
No 3
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=100.00 E-value=4.5e-65 Score=573.55 Aligned_cols=425 Identities=21% Similarity=0.334 Sum_probs=342.3
Q ss_pred ccccCCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHHHHHHHHHHHHHHHH
Q 004241 78 IIGIDGHE-VGNSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWIRVVLVPACGGFIVS 156 (766)
Q Consensus 78 ~~~~~~~~-~~~~~~~l~~~lvG~l~Gl~a~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~p~~ggl~~g 156 (766)
.+|..++. ..+..+++.++++|+++|+++.+|+++++++++++++..... ...+ ...|..+++++.+++++++
T Consensus 17 ~~~~~~~~~~~~~~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~-----~~~~-~~~~~l~~~~~~~~~~l~~ 90 (466)
T 3nd0_A 17 PRNLTDSARSLHPRTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQIL-----APIP-PLAWLVTALISGGMVALSF 90 (466)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----TTSC-THHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----cccc-HHHHHHHHHHHHHHHHHHH
Confidence 34433333 334568899999999999999999999999999988753211 1111 1123323334545555555
Q ss_pred HHHHHHhhhcCCCCCCcchhhccccCCCCCCCcccccccchhhhhcccCCCCccccchhhhhhHHHHHHHHHHHHhhcCC
Q 004241 157 ILNQLRYALSLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGN 236 (766)
Q Consensus 157 ~l~~~~~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~k~~~~~lslgsG~ 236 (766)
++.+ +. .+...|+||||+++.... .+.....++...|++++++++++|+
T Consensus 91 ~l~~--~~--~p~a~GsGIp~v~~~l~g---------------------------~~~~~~~~~~~~k~~~~~ltig~G~ 139 (466)
T 3nd0_A 91 WLMK--RF--APDTSGSGIPQIEGHLEG---------------------------KLPLVWQRVLPIKLVGGFLSLGAGM 139 (466)
T ss_dssp HHHT--TT--CGGGSBCSHHHHHHHTTS---------------------------SSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHH--HH--CCCcCCCCHHHHHHHHcC---------------------------CCCCchHHHHHHHHHHHHHHHhcCC
Confidence 4432 22 223456789998864211 0112234567889999999999999
Q ss_pred ccCCchhHHHHHHHHHHHHhhhhCCCchhhHHHHhhhhhHHHHHhhcchhHHHHHHHHhhccccccccchhhhhhHHHHH
Q 004241 237 SLGPEGPSVEIGKSIAKGVGNLFDRRPRRKVSLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMV 316 (766)
Q Consensus 237 s~G~EGP~v~iGa~ig~~l~~~~~~~~~~~r~l~~~G~aAGiaa~F~aPi~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~ 316 (766)
|+|||||++|+|+++|++++|+|+++++++|++++||+|||+||+||||++|++|++|++..++. ++...+.+ +
T Consensus 140 S~GrEGP~vqiGa~ig~~l~~~~~~~~~~~r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~-----~~~~~~~~-~ 213 (466)
T 3nd0_A 140 LAGFEGPTIQMGGSIGQMTGGWFKATQENQRILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFR-----SQTLAYHS-L 213 (466)
T ss_dssp SCCTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCS-----SCCTTHHH-H
T ss_pred CCCCcchHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHhCCchHHHHHHHHhhhcccc-----HHHHHHHH-H
Confidence 99999999999999999999999999999999999999999999999999999999999875431 12233444 6
Q ss_pred HHHHHHHHHHHHhhcCCCCccccCcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHH
Q 004241 317 ILSAVIASVVSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMG 396 (766)
Q Consensus 317 ~~aa~~a~~v~~~~~g~~~~f~~~~~~~~~~~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 396 (766)
+++|++|+++++.+.|+++.|.++.++..++.+++.++++|++||++|.+|++++.+..++++++.+ .++++++.++
T Consensus 214 ~~as~~a~~v~~~~~g~~~~f~~~~~~~~~~~~l~~~illGi~~Gl~g~lf~~~~~~~~~~~~~~~~---~~~~~~~~l~ 290 (466)
T 3nd0_A 214 LFGCVMATIILRMIRGQSAIISLTEFKRVPLDSLWMFIILGILFGVMGYTFNRGLFKVLDWFDRLPP---LATKWKGFLL 290 (466)
T ss_dssp HHHHHHHHHHHHHHTCSSCSSCCTTCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCH---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCceecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccHHHHHHHH
Confidence 8899999999999999999999987665678899999999999999999999998877666554321 2456788999
Q ss_pred HHHHHHHHHHhcccccCCHHHHHHHHccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHH
Q 004241 397 GLAVGLIALMFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGK 476 (766)
Q Consensus 397 gllvg~i~~~~P~~~g~G~~~i~~ll~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~ 476 (766)
|++++++.+++|+.+|+||+.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.
T Consensus 291 g~~~g~l~~~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~ 365 (466)
T 3nd0_A 291 GSIIGILSLFPLPLTDGGDNAVLWAFNSQ-----SHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMAR 365 (466)
T ss_dssp HHHHHHHTTSSSSCSSSSHHHHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCC-----ccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988764 4566778889999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCCccccccccccchHHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhccCC
Q 004241 477 FINFAIAQSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRR 556 (766)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~p~~~alvGaaa~lag~~~aPls~~viv~Eltg~~~~llP~mia~~va~~v~~~~~~~~ 556 (766)
+++.++|. ...+|+.|+++||+|++++++|+|+|++++++|+||++++++|+|+++++|+++++. +.++
T Consensus 366 ~~~~~~p~----------~~~~~~~~a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~-~~~~ 434 (466)
T 3nd0_A 366 HFHLLFPS----------QIPEPAVMAIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEA-LGGK 434 (466)
T ss_dssp HHHHHCTT----------TCSSTHHHHHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTT-SCCC
T ss_pred HHHHhCCc----------cccCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHH-hCCC
Confidence 99987774 236799999999999999999999999999999999999999999999999998865 4679
Q ss_pred cchhhHHH
Q 004241 557 DVKETKVA 564 (766)
Q Consensus 557 ~~~~~~~~ 564 (766)
++||....
T Consensus 435 ~iY~~~l~ 442 (466)
T 3nd0_A 435 PIYTVLLE 442 (466)
T ss_dssp CHHHHHHH
T ss_pred ChHHHHHH
Confidence 99998653
No 4
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=100.00 E-value=2.1e-64 Score=566.69 Aligned_cols=414 Identities=22% Similarity=0.334 Sum_probs=338.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcCCccccccCCCchhHH---HHHHHHHHHHHHHHHHHHHHhh
Q 004241 88 NSGVIISSCLVGLLTGIGVVLFNKGVHEIRDFFWDGIPYGGASWLREKPIPAIWI---RVVLVPACGGFIVSILNQLRYA 164 (766)
Q Consensus 88 ~~~~~l~~~lvG~l~Gl~a~lf~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~w~---~~~l~p~~ggl~~g~l~~~~~~ 164 (766)
...+++.++++|+++|+++.+|+++++++++++++..+... ..+|+ .+++++.+++++++++.+. .
T Consensus 17 ~~~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~--~ 85 (446)
T 4ene_A 17 PLAILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTA---------DNYPLLLTVAFLCSAVLAMFGYFLVRK--Y 85 (446)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS---------SSHHHHHHHHHHHHHHHHHHHHHHHHH--H
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------ccchHHHHHHHHHHHHHHHHHHHHHHH--h
Confidence 45678999999999999999999999999999887532110 11232 2233455566677766432 1
Q ss_pred hcCCCCCCcchhhccccCCCCCCCcccccccchhhhhcccCCCCccccchhhhhhHHHHHHHHHHHHhhcCCccCCchhH
Q 004241 165 LSLDDDDDDDVQQVQDKSYPPPHPQAQAKDDISVITVSSTTSLPTIYYDYLKIAFQPLLKAVAACITLGTGNSLGPEGPS 244 (766)
Q Consensus 165 ~~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~k~~~~~lslgsG~s~G~EGP~ 244 (766)
.+...|+|+||+++... ..+....+++...|++++++++++|+|+|||||+
T Consensus 86 --~p~a~GsGip~v~~~l~---------------------------~~~~~~~~r~~~~k~~~~~lti~~G~s~GrEGP~ 136 (446)
T 4ene_A 86 --APEAGGSGIPEIEGALE---------------------------DQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPT 136 (446)
T ss_dssp --CGGGSSCSHHHHHHHHH---------------------------TCSCCCHHHHHHHHHHHHHHHHHTTCSCBSHHHH
T ss_pred --CcccCCCCHHHHHHHHh---------------------------CCCccchHHHHHHHHHHHHHHHhcCCccCCcchH
Confidence 22335678999875311 0112333567789999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhCCCchhhH-HHHhhhhhHHHHHhhcchhHHHHHHHHhhccccccccchhhhhhHHHHHHHHHHHH
Q 004241 245 VEIGKSIAKGVGNLFDRRPRRKV-SLVAAGSAAGISSGFNAAVAGCFFAVESVIWPSSAADSSASLAYTTSMVILSAVIA 323 (766)
Q Consensus 245 v~iGa~ig~~l~~~~~~~~~~~r-~l~~~G~aAGiaa~F~aPi~G~lFa~E~~~~~~~~~~~~~~~~~~~~~~~~aa~~a 323 (766)
+|+|+++|++++|+|+++++++| ++++||+|||+||+||||++|++|++|++..++. ++++.+.+ +++++++|
T Consensus 137 vqiGa~ig~~~~~~~~~~~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~-----~~~~~~~~-~~~as~~a 210 (446)
T 4ene_A 137 VQIGGNIGRMVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFR-----YTLISIKA-VFIGVIMS 210 (446)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSS-----CCCCCHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcc-----hhHHHHHH-HHHHHHHH
Confidence 99999999999999999888887 9999999999999999999999999999974321 11234444 68899999
Q ss_pred HHHHHhhcCCCCccccCcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchhHHHHHHHHHHHHH
Q 004241 324 SVVSEVGLGSEPAFKVPEYDFRSPGELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKAVFPVMGGLAVGLI 403 (766)
Q Consensus 324 ~~v~~~~~g~~~~f~~~~~~~~~~~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~lggllvg~i 403 (766)
+++++.+.|+++.|++++++..+..+++.++++|++||++|.+|++++.+..++++++.++...+..+.+.+++++++++
T Consensus 211 ~~v~~~~~g~~~~~~~~~~~~~~~~~l~~~illGi~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~g~l 290 (446)
T 4ene_A 211 TIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGMQDLLHRVHGGNITKWVLMGGAIGGLCGLL 290 (446)
T ss_dssp HHHHHHTTTTCCSCCCCCCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCceeecCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999998877667789999999999999999999999988888777654321111222334667788889
Q ss_pred HHHhcccccCCHHHHHHHHccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHHHHHHhhh
Q 004241 404 ALMFPEILYWGFENVDILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIA 483 (766)
Q Consensus 404 ~~~~P~~~g~G~~~i~~ll~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~~~~~~~~ 483 (766)
.+++|+.+|+||+.++.+++++ .+...++.++++|+++|++|+|+|+|||+|+|++++||++|+++|.+++.++|
T Consensus 291 ~~~~p~~~G~G~~~i~~~~~~~-----~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p 365 (446)
T 4ene_A 291 GFVAPATSGGGFNLIPIATAGN-----FSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFP 365 (446)
T ss_dssp HHHCGGGSSCCSTHHHHHHTTC-----SCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCG
T ss_pred HHHhHhhcCCcHHHHHHHHcCC-----chHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999988764 45667788899999999999999999999999999999999999999998777
Q ss_pred cCCCccccccccccchHHHHHHHHHHHHHHhcCchHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHhhhccCCcchhhHH
Q 004241 484 QSNPTIHFSILEVASPQAYGLVGMAATLAGVCQVPLTSVLLLFELTQDYRIVLPLLGAVGLSSWFTSGQMRRRDVKETKV 563 (766)
Q Consensus 484 ~~~~~~~~~~~~~~~p~~~alvGaaa~lag~~~aPls~~viv~Eltg~~~~llP~mia~~va~~v~~~~~~~~~~~~~~~ 563 (766)
. ...+|+.|+++||+|+++|++|+|+|++++++|+||++++++|+|+++++|+++++.+ .++++||...
T Consensus 366 ~----------~~~~~~~~a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~~-~~~~iY~~~l 434 (446)
T 4ene_A 366 Q----------YHLEAGTFAIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFT-GGKPLYSAIL 434 (446)
T ss_dssp G----------GTCCHHHHHHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHT-TCCCHHHHHH
T ss_pred c----------cccCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHHh-CCCChHHHHH
Confidence 5 2368999999999999999999999999999999999999999999999999988654 6789999865
No 5
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.78 E-value=1.1e-18 Score=170.31 Aligned_cols=132 Identities=26% Similarity=0.303 Sum_probs=113.6
Q ss_pred hhccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHh--------------
Q 004241 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ-------------- 684 (766)
Q Consensus 619 ~~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~-------------- 684 (766)
..+++++|+|+|+++++++++++|+.+|++.|.+++++.+||+|++|+++|+||.+|+++......
T Consensus 13 ~~l~~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~~~~~~~~~~~~~~~~~ 92 (170)
T 4esy_A 13 RAIRQVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAIPA 92 (170)
T ss_dssp HHHHTSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCCTTHHHHHHHHTTTSCH
T ss_pred HHHcCCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhhccccchhhhhhhccch
Confidence 346788999999999999999999999999999999999999999999999999999975421100
Q ss_pred -----hhccccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHh
Q 004241 685 -----AKTSRSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 759 (766)
Q Consensus 685 -----~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~ 759 (766)
......+.+++++|++ ++.++++++++.+|+++|.+++++++||+| +|+++|+||++||++++
T Consensus 93 ~~~~~~~~~~~~~~v~~im~~------~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd------~g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 93 PEVEHLFETGRKLTASAVMTQ------PVVTAAPEDSVGSIADQMRRHGIHRIPVVQ------DGVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHHHHHHTTCBHHHHCBC------CSCCBCTTSBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHTTTS
T ss_pred hhHHhhhccccccchhhhccc------CcccCCcchhHHHHHHHHHHcCCcEEEEEE------CCEEEEEEEHHHHHHHH
Confidence 0001124679999998 899999999999999999999999999998 68999999999999987
Q ss_pred hcc
Q 004241 760 RFC 762 (766)
Q Consensus 760 ~~~ 762 (766)
-++
T Consensus 161 ~~~ 163 (170)
T 4esy_A 161 LLE 163 (170)
T ss_dssp CCC
T ss_pred Hhc
Confidence 544
No 6
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.77 E-value=4.1e-18 Score=199.75 Aligned_cols=191 Identities=16% Similarity=0.113 Sum_probs=144.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----C-CchhHHHHHHHHHHHHHH-HHhcccccCCHHHHHHH
Q 004241 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN----G-IPKAVFPVMGGLAVGLIA-LMFPEILYWGFENVDIL 421 (766)
Q Consensus 348 ~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~----~-~~~~~~~~lggllvg~i~-~~~P~~~g~G~~~i~~l 421 (766)
..+.+.+++|+++|+++.+|..++.++.+++..+.... . ..+...|++++++.+.+. .+.|+..|+|.++++..
T Consensus 9 r~~~~~~lvGi~~gl~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGIp~v~~~ 88 (632)
T 3org_A 9 RLVCFLTLLGVTAALFIFAVDLAVHGLEELRMKISRLAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAEGSGLPQMKSI 88 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCBCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHH
Confidence 34567789999999999999999888777654322211 1 122345677777777665 67899999999999888
Q ss_pred HccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHH--HHHHhhhcCCCccccccccccch
Q 004241 422 LESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGK--FINFAIAQSNPTIHFSILEVASP 499 (766)
Q Consensus 422 l~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~--~~~~~~~~~~~~~~~~~~~~~~p 499 (766)
+++.. +.......+..++.|++.+.+|+|+|.|.|+++|++.+||++|..+++ .++..... ..+.
T Consensus 89 l~g~~--~~~~~~~~~~~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~~-----------~~~~ 155 (632)
T 3org_A 89 LSGFY--DKMRSALELRVLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCTD-----------RALR 155 (632)
T ss_dssp TTTTH--HHHGGGGSHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHHS-----------HHHH
T ss_pred HhCcc--ccccccccHHHHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccCC-----------HHHH
Confidence 77641 000111234567899999999999999999999999999999998888 66532211 2345
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHhCC-c--hhHHHHHHHHHHHHHHHhh
Q 004241 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELTQD-Y--RIVLPLLGAVGLSSWFTSG 551 (766)
Q Consensus 500 ~~~alvGaaa~lag~~~aPls~~viv~Eltg~-~--~~llP~mia~~va~~v~~~ 551 (766)
..+..||+||.+|++++||+++++|.+|.... + ..+.|.++++++++++.+.
T Consensus 156 r~ll~aGaaAG~aaaF~aPlaGvlFalE~~~~~~~~~~~~~~~~as~~a~~v~~~ 210 (632)
T 3org_A 156 LQTLAAACAVGLASSFGAPLGGVLYSIETIASFYLVQAFWKGVLSALSGAIVYEL 210 (632)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHTCSEEETTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCccHhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999998753 3 4678999999998877653
No 7
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.74 E-value=1.7e-17 Score=157.77 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=113.0
Q ss_pred hcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHhh
Q 004241 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVSE 696 (766)
Q Consensus 620 ~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~d 696 (766)
.+...+|+|+|++ ++.++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+.... +.++++
T Consensus 19 ~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~------~~~v~~ 92 (148)
T 3lv9_A 19 EFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINEN------KIELEE 92 (148)
T ss_dssp GGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHS------CCCGGG
T ss_pred ccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCC------CccHHH
Confidence 4677899999999 99999999999999999999999999999988 89999999999998775421 467999
Q ss_pred hcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 697 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 697 vm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
+| + ++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++-.
T Consensus 93 ~m-~------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~l~~ 145 (148)
T 3lv9_A 93 IL-R------DIIYISENLTIDKALERIRKEKLQLAIVVDE-----YGGTSGVVTIEDILEEIVG 145 (148)
T ss_dssp TC-B------CCEEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSSEEEEEEHHHHHHHHHH
T ss_pred hc-C------CCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 99 6 6899999999999999999999999999997 7999999999999998743
No 8
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.73 E-value=1.6e-17 Score=152.15 Aligned_cols=121 Identities=22% Similarity=0.292 Sum_probs=110.0
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGE 703 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~ 703 (766)
++|+|+|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+|+.+|+.+.+.. ...+++++|.+
T Consensus 1 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~-------~~~~v~~~~~~--- 70 (122)
T 3kpb_A 1 TLVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ-------NKKTIEEIMTR--- 70 (122)
T ss_dssp CBHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHT-------TCCBGGGTSBS---
T ss_pred CchHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHh-------cccCHHHHhcC---
Confidence 46899999999999999999999999999999999999999999999999999987654 12479999988
Q ss_pred CccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 704 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 704 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++.+.++
T Consensus 71 ---~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-----~g~~~Givt~~dl~~~l~~~ 121 (122)
T 3kpb_A 71 ---NVITAHEDEPVDHVAIKMSKYNISGVPVVDD-----YRRVVGIVTSEDISRLFGGK 121 (122)
T ss_dssp ---SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHC--
T ss_pred ---CCeEECCCCCHHHHHHHHHHhCCCeEEEECC-----CCCEEEEEeHHHHHHHhhcC
Confidence 7889999999999999999999999999997 79999999999999987653
No 9
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.72 E-value=1.8e-17 Score=154.14 Aligned_cols=123 Identities=18% Similarity=0.135 Sum_probs=107.1
Q ss_pred cccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHhhh
Q 004241 621 KRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM 697 (766)
Q Consensus 621 l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv 697 (766)
+..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+...... .+.+++++
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~-----~~~~v~~~ 77 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGS-----GQKQLGAV 77 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTT-----TTSBHHHH
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCC-----CcCCHHHH
Confidence 567899999995 56789999999999999999999999999987 89999999999998765421 24789999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
|++ +.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++++-
T Consensus 78 m~~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 78 MRP-------IQVVLNNTALPKVFDQMMTHRLQLALVVDE-----YGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp SEE-------CCEEETTSCHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHHHHH
T ss_pred hcC-------CcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-----CCCEEEEEEHHHHHHHHc
Confidence 954 789999999999999999999999999997 799999999999999864
No 10
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.72 E-value=1.2e-17 Score=154.53 Aligned_cols=121 Identities=17% Similarity=0.211 Sum_probs=107.1
Q ss_pred ccccccccccc--eeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHhhhcc
Q 004241 623 RVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCS 699 (766)
Q Consensus 623 ~~~V~diM~~~--~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~ 699 (766)
+++|+|+|+++ +.++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.+... ..+.+++++|+
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~-----~~~~~v~~~m~ 76 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSD-----AEAFSMDKVLR 76 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTT-----CCCCCHHHHCB
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcc-----CCCCCHHHHcC
Confidence 46899999965 9999999999999999999999999999988 8999999999998765321 23578999996
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 700 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 700 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
+ +.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++-
T Consensus 77 ~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 77 T-------AVVVPESKRVDRMLKEFRSQRYHMAIVIDE-----FGGVSGLVTIEDILELIV 125 (127)
T ss_dssp C-------CCEEETTCBHHHHHHHHHHTTCCEEEEECT-----TSCEEEEEEHHHHHHHC-
T ss_pred C-------CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHh
Confidence 4 679999999999999999999999999997 899999999999999864
No 11
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.72 E-value=4.6e-17 Score=151.54 Aligned_cols=125 Identities=23% Similarity=0.324 Sum_probs=112.5
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccC
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSAD 701 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~ 701 (766)
++++++++|++++.++++++++.++++.|.+++.+.+||+| +++++|+||.+|+.+.+.... ..+.+++++|.+
T Consensus 2 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~----~~~~~v~~~~~~- 75 (133)
T 2ef7_A 2 EEEIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGK----SLETKAEEFMTA- 75 (133)
T ss_dssp CCCBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC----CTTCBGGGTSEE-
T ss_pred CcccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCC----CcccCHHHHcCC-
Confidence 56789999999999999999999999999999999999999 899999999999988765421 234789999988
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 702 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 702 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++.+.+.
T Consensus 76 -----~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~~ 126 (133)
T 2ef7_A 76 -----SLITIREDSPITGALALMRQFNIRHLPVVDD-----KGNLKGIISIRDITRAIDDM 126 (133)
T ss_dssp -----CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHH
T ss_pred -----CCEEECCCCCHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEEHHHHHHHHHHH
Confidence 7889999999999999999999999999997 78999999999999987654
No 12
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.71 E-value=4.9e-17 Score=151.35 Aligned_cols=123 Identities=15% Similarity=0.112 Sum_probs=108.0
Q ss_pred ccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecC-CCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 624 VFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDN-DNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 624 ~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~-~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
++|+|+|++ +++++++++++.++++.|.+++++.+||+|+ +++++|+||.+|+.+...... .....+++++|.
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~---~~~~~~v~~~m~- 77 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKK---EFTKEIMLRAAD- 77 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSS---CCCHHHHHHHSB-
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccC---ccchhhHHHhcc-
Confidence 679999975 7899999999999999999999999999975 589999999999998765311 112467999994
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 701 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 701 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 78 ------~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~lvGiit~~Dil~~l~g 127 (130)
T 3hf7_A 78 ------EIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE-----YGDIQGLVTVEDILEEIVG 127 (130)
T ss_dssp ------CCCEEETTCBHHHHHHHHHHHCCCEEEEECT-----TSCEEEEEEHHHHHHHHHC
T ss_pred ------CCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC-----CCCEEEEeeHHHHHHHHhC
Confidence 5789999999999999999999999999997 7999999999999998753
No 13
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.71 E-value=2.3e-17 Score=153.24 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=106.9
Q ss_pred cccccccccc--cceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHhhhc
Q 004241 622 RRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMC 698 (766)
Q Consensus 622 ~~~~V~diM~--~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm 698 (766)
.+++|+|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+.... .+.+++++|
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-------~~~~v~~~m 75 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE-------PALDIRSLV 75 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC-------TTSCGGGGC
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc-------CCcCHHHHh
Confidence 4578999999 578999999999999999999999999999986 899999999999876431 246789999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 699 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 699 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++-.
T Consensus 76 ~~-------~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-----~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 76 RP-------AVFIPEVKRLNVLLREFRASRNHLAIVIDE-----HGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp BC-------CCEEETTCBHHHHHHHHHTSSCCEEEEECC------CCEEEEEEHHHHHHHHHH
T ss_pred CC-------CeEeCCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 64 679999999999999999999999999997 7999999999999998743
No 14
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.71 E-value=3.1e-17 Score=158.01 Aligned_cols=126 Identities=16% Similarity=0.184 Sum_probs=108.8
Q ss_pred cccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhh-ccccchhHhhhcc
Q 004241 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK-TSRSKLLVSEMCS 699 (766)
Q Consensus 623 ~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~-~~~~~~~V~dvm~ 699 (766)
..+++++|++ +++++++++|+.+|++.|.+++++++||+|++++++|+||.+|+.+.+...... ....+.+++++|.
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~ 93 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTK 93 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCB
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhc
Confidence 3478899986 799999999999999999999999999999999999999999999877653211 1123578999999
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 700 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 700 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
+ ++.++++++++.+++++|.+++ .+||||+ +|+++|+||++||++++.+
T Consensus 94 ~------~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~-----~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 94 T------DVAVVSPDFTITEVLHKLVDES--FLPVVDA-----EGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp C------SCCCBCTTCCHHHHHHHTTTSS--EEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred C------CceecccccHHHHHHHHHHHcC--CeEEEec-----CCEEEEEEEHHHHHHHHHH
Confidence 8 8899999999999999998875 4999997 8999999999999998854
No 15
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.71 E-value=1.6e-17 Score=153.91 Aligned_cols=124 Identities=21% Similarity=0.212 Sum_probs=110.8
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccC
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSAD 701 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~ 701 (766)
.+++++++|.+++.++++++++.++++.|.+++.+.+||+|+ ++++|+||.+|+.+.+... ...+.+++++|.+
T Consensus 3 ~s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~~----~~~~~~v~~~m~~- 76 (128)
T 3gby_A 3 ASVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKGW----PTVKEKLGEELLE- 76 (128)
T ss_dssp TTCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSSS----CCTTCBCCGGGCB-
T ss_pred cceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhhC----CcccCcHHHHccC-
Confidence 357899999999999999999999999999999999999998 9999999999998765321 1122678999998
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 702 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 702 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++++.+
T Consensus 77 -----~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-----~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 77 -----TVRSYRPGEQLFDNLISVAAAKCSVVPLADE-----DGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp -----CCCCBCTTSBGGGSHHHHHHCSSSEEEEECT-----TCBEEEEEEHHHHHHHHHT
T ss_pred -----CCcEECCCCCHHHHHHHHHhCCCcEEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 7889999999999999999999999999997 8999999999999998754
No 16
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.70 E-value=8.2e-17 Score=157.45 Aligned_cols=126 Identities=17% Similarity=0.124 Sum_probs=109.8
Q ss_pred hhccccccccccc--cceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 619 ELKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 619 ~~l~~~~V~diM~--~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
..+..++|+|+|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+.+..... .+.+++
T Consensus 37 ~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------~~~~v~ 110 (172)
T 3lhh_A 37 FRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAG------ERLELV 110 (172)
T ss_dssp ------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTT------CCCCGG
T ss_pred hccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhc------CcccHH
Confidence 3466789999999 688999999999999999999999999999988 9999999999999877531 246899
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++| + ++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++-.+
T Consensus 111 ~im-~------~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dil~~l~~~ 165 (172)
T 3lhh_A 111 DLV-K------NCNFVPNSLSGMELLEHFRTTGSQMVFVVDE-----YGDLKGLVTLQDMMDALTGE 165 (172)
T ss_dssp GGC-B------CCEEEETTCCHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHTT
T ss_pred HHh-c------CCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-----CCCEEEEeeHHHHHHHHhCC
Confidence 999 6 6899999999999999999999999999997 79999999999999987543
No 17
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.70 E-value=5.6e-17 Score=151.82 Aligned_cols=127 Identities=26% Similarity=0.352 Sum_probs=112.4
Q ss_pred hccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhH-HHHHHHHhhhccccchhHhhhc
Q 004241 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDI-EEFSKYAQAKTSRSKLLVSEMC 698 (766)
Q Consensus 620 ~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL-~~~l~~~~~~~~~~~~~V~dvm 698 (766)
.+.+++++++|++++.++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+ .+.+.. ....+.+++++|
T Consensus 4 ~l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----~~~~~~~v~~~m 79 (138)
T 2p9m_A 4 TLKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRD----KYTLETTIGDVM 79 (138)
T ss_dssp -CTTCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTT----CCCSSCBHHHHS
T ss_pred ccccCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhh----cccCCcCHHHHh
Confidence 467789999999999999999999999999999999999999999999999999999 776532 122357899999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHHcC-----CCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 699 SADGETCCVPCTATPNMNLLSALILMDRYG-----VNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 699 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~-----~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
.+ ++.++++++++.++++.|.+++ .+++||+|+ +|+++|+||++|+++.+.+
T Consensus 80 ~~------~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 80 TK------DVITIHEDASILEAIKKMDISGKKEEIINQLPVVDK-----NNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp CS------SCCCEETTSBHHHHHHHHTCC-----CCCEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred CC------CcEEECCCCCHHHHHHHHHhcCCccccccEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 98 7889999999999999999999 999999997 7899999999999998754
No 18
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.70 E-value=2.9e-17 Score=154.13 Aligned_cols=123 Identities=15% Similarity=0.129 Sum_probs=107.4
Q ss_pred ccccccccc--cceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHhhhcc
Q 004241 623 RVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCS 699 (766)
Q Consensus 623 ~~~V~diM~--~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~ 699 (766)
+++|+|+|+ +++.++++++++.+|++.|.+++++.+||+|++ ++++|+||.+|+.+.+.. ....+.+++++|+
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~----~~~~~~~v~~~m~ 77 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILK----ADGDSDDVKKLLR 77 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGS----SSGGGCCGGGTCB
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHh----ccCCCcCHHHHcC
Confidence 468999999 578999999999999999999999999999987 899999999999876542 1123467999996
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 700 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 700 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
+ +.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++-.
T Consensus 78 ~-------~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~g~lvGiit~~Dil~~l~~ 127 (136)
T 3lfr_A 78 P-------ATFVPESKRLNVLLREFRANHNHMAIVIDE-----YGGVAGLVTIEDVLEQIVG 127 (136)
T ss_dssp C-------CCEEETTCBHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHTTC--
T ss_pred C-------CeEECCCCcHHHHHHHHHhcCCeEEEEEeC-----CCCEEEEEEHHHHHHHHhC
Confidence 4 789999999999999999999999999997 7999999999999988754
No 19
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.70 E-value=1.1e-16 Score=150.87 Aligned_cols=122 Identities=18% Similarity=0.176 Sum_probs=109.4
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCC--cEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN--ILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g--~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
.++++|+|++++.++++++++.++++.|.+++.+.+||+|+++ +++|+||.+|+.+.+.... ..+.+++++|.+
T Consensus 4 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~----~~~~~v~~~m~~ 79 (141)
T 2rih_A 4 AIRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRL----DLDGPAMPIANS 79 (141)
T ss_dssp -CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTC----CTTSBSGGGCBC
T ss_pred ceEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCC----CCCCCHHHHcCC
Confidence 3689999999999999999999999999999999999999888 9999999999998765321 134789999988
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 701 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 701 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
++.+++++ ++.+++++|.+++.+++||+|+ +|+++|+||++|++++..
T Consensus 80 ------~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 80 ------PITVLDTD-PVHVAAEKMRRHNIRHVVVVNK-----NGELVGVLSIRDLCFERA 127 (141)
T ss_dssp ------CCEEETTS-BHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHSCHH
T ss_pred ------CCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-----CCcEEEEEEHHHHHHHHH
Confidence 78999999 9999999999999999999997 799999999999987654
No 20
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.70 E-value=1e-16 Score=155.52 Aligned_cols=132 Identities=20% Similarity=0.170 Sum_probs=117.4
Q ss_pred hhhhcccccccccccc---ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchh
Q 004241 617 VEELKRRVFVSEVMRT---RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLL 693 (766)
Q Consensus 617 ~~~~l~~~~V~diM~~---~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~ 693 (766)
....+..++|+|+|++ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..... ...+.+
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~--~~~~~~ 94 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGA--ASLQQS 94 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHGG--GGGTSB
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHhcCC--ccccCC
Confidence 3466888999999996 69999999999999999999999999999999999999999999988765321 123578
Q ss_pred HhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 694 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 694 V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++++|.+ ++.++++++++.+++++|.+++.+++||+| +|+++|+||++||++++.++
T Consensus 95 v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd------~g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 95 VSVAMTK------NVVRCQHNSTTDQLMEIMTGGRFRHVPVEE------NGRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp GGGTSBS------SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHTTCC
T ss_pred HHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHHH
Confidence 9999998 788999999999999999999999999999 58999999999999987654
No 21
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.70 E-value=1.6e-16 Score=146.00 Aligned_cols=123 Identities=20% Similarity=0.202 Sum_probs=108.8
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGE 703 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~ 703 (766)
++++|+|++++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+.... ...+.+++++|.+
T Consensus 1 m~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~---~~~~~~v~~~m~~--- 73 (125)
T 1pbj_A 1 MRVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGD---DLAEVKVWEVMER--- 73 (125)
T ss_dssp -CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTC---CTTTSBHHHHCBC---
T ss_pred CCHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCC---cccccCHHHHcCC---
Confidence 478999999999999999999999999999999999999 899999999999997765421 1135789999998
Q ss_pred CccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 704 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 704 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++.++++++++.++++.|.+++.+.+||+| +|+++|+||++|+++.+.++
T Consensus 74 ---~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd------~~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 74 ---DLVTISPRATIKEAAEKMVKNVVWRLLVEE------DDEIIGVISATDILRAKMAK 123 (125)
T ss_dssp ---GGGEECTTSCHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHC--
T ss_pred ---CCeEECCCCCHHHHHHHHHhcCCcEEEEEE------CCEEEEEEEHHHHHHHHHhc
Confidence 789999999999999999999999999999 58999999999999987654
No 22
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.69 E-value=1.6e-16 Score=148.73 Aligned_cols=126 Identities=20% Similarity=0.246 Sum_probs=111.9
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHH-HHHHHhhhccccchhHhhhcc
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE-FSKYAQAKTSRSKLLVSEMCS 699 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~-~l~~~~~~~~~~~~~V~dvm~ 699 (766)
+...+++|+|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+ .+.. ....+.+++++|.
T Consensus 4 l~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~----~~~~~~~v~~~m~ 79 (138)
T 2yzi_A 4 DMKAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVP----GLPYDIPVERIMT 79 (138)
T ss_dssp CTTSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT----CCCTTSBGGGTCB
T ss_pred hhhhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhc----CCcccCCHHHHhh
Confidence 4667999999999999999999999999999999999999999999999999999974 3322 1123478999998
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 700 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 700 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
+ ++.++++++++.+++++|.+++.+++ |+|+ +|+++|+||++|+++.+.++
T Consensus 80 ~------~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~-----~g~~~Giit~~dil~~~~~~ 130 (138)
T 2yzi_A 80 R------NLITANVNTPLGEVLRKMAEHRIKHI-LIEE-----EGKIVGIFTLSDLLEASRRR 130 (138)
T ss_dssp C------SCCEEETTSBHHHHHHHHHHHTCSEE-EEEE-----TTEEEEEEEHHHHHHHHHCC
T ss_pred C------CCeEECCCCcHHHHHHHHHhcCCCEE-EECC-----CCCEEEEEEHHHHHHHHHHH
Confidence 8 78999999999999999999999999 9997 79999999999999987654
No 23
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.69 E-value=9.4e-17 Score=153.69 Aligned_cols=125 Identities=21% Similarity=0.166 Sum_probs=111.9
Q ss_pred hcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEe-cC-CCcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 620 LKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIV-DN-DNILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 620 ~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVv-d~-~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
.+...+|+++|++ ++.++++++++.+|++.|.+++++.+||+ |+ +++++|+||.+|+.+.+.... +.+++
T Consensus 16 ~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~------~~~v~ 89 (153)
T 3oco_A 16 EMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDD------KAKIS 89 (153)
T ss_dssp HHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHT------TSBGG
T ss_pred ccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCC------CCcHH
Confidence 4567899999997 89999999999999999999999999999 65 489999999999998875421 46799
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++..+
T Consensus 90 ~~m-~------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~-----~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 90 TIM-R------DIVSVPENMKVPDVMEEMSAHRVPMAIVIDE-----YGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp GTC-B------CCEEEETTSBHHHHHHHHHHTTCSCEEEECT-----TSCEEEEECHHHHHHHHHC-
T ss_pred HHh-C------CCeEECCCCCHHHHHHHHHHcCCcEEEEEeC-----CCCEEEEeeHHHHHHHHhcc
Confidence 999 6 6899999999999999999999999999997 79999999999999987543
No 24
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.69 E-value=5.4e-17 Score=154.43 Aligned_cols=132 Identities=17% Similarity=0.133 Sum_probs=114.0
Q ss_pred hhhcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhh--hccccchh
Q 004241 618 EELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA--KTSRSKLL 693 (766)
Q Consensus 618 ~~~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~--~~~~~~~~ 693 (766)
...+..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+..... .....+.+
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~ 88 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMK 88 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCB
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCC
Confidence 456788999999994 69999999999999999999999999999999999999999999987642110 01123578
Q ss_pred HhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 694 VSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 694 V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++++|.+ ++.++++++++.+++++|.+++. +||||+ +|+++|+||++|+++.+.+.
T Consensus 89 v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~-----~g~~~Giit~~dil~~l~~~ 144 (150)
T 3lqn_A 89 VEQVMKQ------DIPVLKLEDSFAKALEMTIDHPF--ICAVNE-----DGYFEGILTRRAILKLLNKK 144 (150)
T ss_dssp GGGTCBS------SCCEEETTCBHHHHHHHHHHCSE--EEEECT-----TCBEEEEEEHHHHHHHHHHH
T ss_pred HHHHhcC------CCceeCCCCCHHHHHHHHHhCCE--EEEECC-----CCcEEEEEEHHHHHHHHHHH
Confidence 9999998 78999999999999999999987 999997 89999999999999987653
No 25
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=6.8e-17 Score=150.36 Aligned_cols=127 Identities=20% Similarity=0.159 Sum_probs=108.9
Q ss_pred hccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHH-HHHHHhhhccccchhHhhhc
Q 004241 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEE-FSKYAQAKTSRSKLLVSEMC 698 (766)
Q Consensus 620 ~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~-~l~~~~~~~~~~~~~V~dvm 698 (766)
.++.++++|+|.+++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+ .+.... ...+.+++++|
T Consensus 4 ~~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~---~~~~~~v~~~m 80 (133)
T 1y5h_A 4 PFTMTTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGL---DPNTATAGELA 80 (133)
T ss_dssp ----CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTTGGGTC---CTTTSBHHHHH
T ss_pred hhhhcCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHHHhcCC---CccccCHHHHh
Confidence 45567999999999999999999999999999999999999998999999999999984 443211 11347899999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 699 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 699 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
.+ ++.++++++++.+++++|.+++.+++||+| +|+++|+||++|+++.+.+
T Consensus 81 ~~------~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd------~g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 81 RD------SIYYVDANASIQEMLNVMEEHQVRRVPVIS------EHRLVGIVTEADIARHLPE 131 (133)
T ss_dssp TT------CCCCEETTCCHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHTCC-
T ss_pred cC------CCEEECCCCCHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHh
Confidence 88 788999999999999999999999999999 5799999999999998754
No 26
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.68 E-value=2e-16 Score=150.56 Aligned_cols=120 Identities=20% Similarity=0.254 Sum_probs=108.4
Q ss_pred cccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 623 ~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
.++|+|+|++ +++++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+.... ...+.+++++|.+
T Consensus 27 ~~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~---~~~~~~v~~~m~~ 103 (149)
T 3k2v_A 27 LLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGV---DMRDASIADVMTR 103 (149)
T ss_dssp TSBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSS---CCTTCBHHHHSEE
T ss_pred ccCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCC---CcccCcHHHHcCC
Confidence 3699999999 9999999999999999999999999999999999999999999998764311 1235789999998
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHH
Q 004241 701 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 757 (766)
Q Consensus 701 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~ 757 (766)
++.++++++++.+++++|.+++.+++||+|+ ++++|+||++||++
T Consensus 104 ------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~------~~~~Giit~~dil~ 148 (149)
T 3k2v_A 104 ------GGIRIRPGTLAVDALNLMQSRHITCVLVADG------DHLLGVVHMHDLLR 148 (149)
T ss_dssp ------SCCEECTTCBHHHHHHHHHHHTCSEEEEEET------TEEEEEEEHHHHTC
T ss_pred ------CCeEECCCCCHHHHHHHHHHcCCCEEEEecC------CEEEEEEEHHHhhc
Confidence 7899999999999999999999999999995 49999999999975
No 27
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.68 E-value=2.1e-16 Score=152.44 Aligned_cols=128 Identities=21% Similarity=0.245 Sum_probs=111.5
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhh-----hccccchhHhh
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA-----KTSRSKLLVSE 696 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~-----~~~~~~~~V~d 696 (766)
..++|+|+|+++++++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+.+.+..... .....+.++.+
T Consensus 3 ~~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~ 82 (160)
T 2o16_A 3 LMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFE 82 (160)
T ss_dssp CCCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHH
T ss_pred CcCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHH
Confidence 4578999999999999999999999999999999999999999999999999999987653110 01123578999
Q ss_pred hcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 697 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 697 vm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
+|.+ ++.++++++++.+++++|.+++.+.+||+| +|+++|+||++||++.+.+
T Consensus 83 im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd------~g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 83 VMHT------DVTSVAPQAGLKESAIYMQKHKIGCLPVVA------KDVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp HSCS------CEEEBCTTSBHHHHHHHHHHTTCSCEEEEE------TTEEEEEECHHHHHHHHHH
T ss_pred HhcC------CCeEECCCCCHHHHHHHHHHhCCCEEEEEE------CCEEEEEEEHHHHHHHHHH
Confidence 9998 789999999999999999999999999999 5899999999999987653
No 28
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.67 E-value=1.1e-16 Score=152.05 Aligned_cols=129 Identities=24% Similarity=0.295 Sum_probs=110.0
Q ss_pred ccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHh----------hhccc
Q 004241 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ----------AKTSR 689 (766)
Q Consensus 622 ~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~----------~~~~~ 689 (766)
..++|+|+|++ +++++++++++.++++.|.+++++.+||+|++++++|+||.+|+.+...... .....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 82 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSKT 82 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTCC----CCHHHHHHHTC----
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHhhcccCcccchHHHHHHHHHh
Confidence 45789999998 8999999999999999999999999999999999999999999975422110 00112
Q ss_pred cchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 690 SKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 690 ~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
.+.++.++|.+ ++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++||++.+.+
T Consensus 83 ~~~~v~~~m~~------~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 83 NGKLVGDLMTP------APLVVEEKTNLEDAAKILLETKYRRLPVVDS-----DGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp -CCBHHHHSEE------SCCCEESSSBHHHHHHHHHHSSCCEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred ccccHHHhcCC------CceEECCCCcHHHHHHHHHHCCCCEEEEECC-----CCcEEEEEEHHHHHHHHHh
Confidence 34689999998 7889999999999999999999999999997 7999999999999998754
No 29
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.67 E-value=4.8e-16 Score=149.71 Aligned_cols=131 Identities=13% Similarity=0.178 Sum_probs=113.3
Q ss_pred hhhccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhh
Q 004241 618 EELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM 697 (766)
Q Consensus 618 ~~~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv 697 (766)
...+..++|+|+|++ ++++++++++.+|++.|.+++.+.+||+|++++++|+||.+|+.+.+... ....+.+++++
T Consensus 11 ~~~l~~~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~---~~~~~~~v~~~ 86 (159)
T 3fv6_A 11 ADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQ---QELTSVPVHII 86 (159)
T ss_dssp HHHHTTCBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSC---SCTTTCBGGGT
T ss_pred HHHHhhCCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhcc---CcccCcCHHHH
Confidence 456788999999997 55999999999999999999999999999999999999999999876321 11234789999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCC---cEEEEEeHHHHHHHhhc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG---QLVGLLDRESIILACRF 761 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g---~lvGIVt~~DIl~~~~~ 761 (766)
|.+. .++.++++++++.+++++|.+++.+++||+|+ +| +++|+||++||++++.+
T Consensus 87 m~~~----~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 87 MTRM----PNITVCRREDYVMDIAKHLIEKQIDALPVIKD-----TDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp SEET----TSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEE-----CSSSEEEEEEEEHHHHHHHHHH
T ss_pred HcCC----CCcEEECCCCCHHHHHHHHHHcCCcEEEEEeC-----CCcceeEEEEEEHHHHHHHHHH
Confidence 9851 14678999999999999999999999999997 67 99999999999998754
No 30
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.66 E-value=1.4e-16 Score=153.18 Aligned_cols=121 Identities=16% Similarity=0.145 Sum_probs=107.7
Q ss_pred hhcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCC-cEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN-ILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 619 ~~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g-~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
..+...+|+|+|++ +++++++++++.++++.|.+++++.+||+|+++ +++|+||.+|+.+.+... .+.+++
T Consensus 33 ~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~------~~~~v~ 106 (156)
T 3oi8_A 33 LDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNP------EQFHLK 106 (156)
T ss_dssp HHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCG------GGCCHH
T ss_pred hccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcC------CcccHH
Confidence 34677899999997 789999999999999999999999999999874 999999999998764321 347899
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHH
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 757 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~ 757 (766)
++|++ +.++++++++.++++.|.+++.+++||+|+ +|+++|+||++|+++
T Consensus 107 ~im~~-------~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~g~~~Givt~~Dile 156 (156)
T 3oi8_A 107 SILRP-------AVFVPEGKSLTALLKEFREQRNHMAIVIDE-----YGGTSGLVTFEDIIE 156 (156)
T ss_dssp HHCBC-------CCEEETTSBHHHHHHHHHHTTCCEEEEECT-----TSSEEEEEEHHHHCC
T ss_pred HHcCC-------CEEECCCCCHHHHHHHHHhcCCeEEEEECC-----CCCEEEEEEHHHhcC
Confidence 99965 689999999999999999999999999997 799999999999863
No 31
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.66 E-value=3.3e-16 Score=150.13 Aligned_cols=132 Identities=16% Similarity=0.154 Sum_probs=112.3
Q ss_pred hhhccccccccccc--cceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhh-ccccchhH
Q 004241 618 EELKRRVFVSEVMR--TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK-TSRSKLLV 694 (766)
Q Consensus 618 ~~~l~~~~V~diM~--~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~-~~~~~~~V 694 (766)
...+...+++|+|+ +++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+...... ....+.++
T Consensus 9 ~~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v 88 (156)
T 3ctu_A 9 FETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDI 88 (156)
T ss_dssp HHHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBG
T ss_pred HHHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcH
Confidence 34456678999999 5899999999999999999999999999999999999999999999887642111 01124789
Q ss_pred hhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 695 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 695 ~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
+++|.+ ++.++++++++.++++.|.+++ ++||||+ +|+++|+||++|+++.+.+.
T Consensus 89 ~~~m~~------~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~-----~g~~~Giit~~dil~~l~~~ 143 (156)
T 3ctu_A 89 VHMTKT------DVAVVSPDFTITEVLHKLVDES--FLPVVDA-----EGIFQGIITRKSILKAVNAL 143 (156)
T ss_dssp GGGCBC------SCCCBCSSCCHHHHHHHTTTSS--EEEEECT-----TSBEEEEEETTHHHHHHHHH
T ss_pred HHhccC------CceeeCCCCcHHHHHHHHHHcC--eEEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 999988 7889999999999999999886 7999997 79999999999999987644
No 32
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.66 E-value=1.5e-16 Score=155.83 Aligned_cols=128 Identities=21% Similarity=0.296 Sum_probs=109.5
Q ss_pred cccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHh----------------
Q 004241 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQ---------------- 684 (766)
Q Consensus 623 ~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~---------------- 684 (766)
.++|+|+|++ +++++++++++.+|++.|.+++++.+||+|++++++|+||.+|+.+......
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~ 82 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDSTW 82 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTCC-------------------CC
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHhhhhhccccCCcccccccccchh
Confidence 4689999999 8999999999999999999999999999999999999999999985321000
Q ss_pred --------hhccccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHH
Q 004241 685 --------AKTSRSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 756 (766)
Q Consensus 685 --------~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl 756 (766)
......+.+++++|++ ++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dil 151 (180)
T 3sl7_A 83 KTFNELQKLISKTYGKVVGDLMTP------SPLVVRDSTNLEDAARLLLETKFRRLPVVDA-----DGKLIGILTRGNVV 151 (180)
T ss_dssp CSHHHHHHHHHTTTTCBHHHHSEE------SCCCEETTSBHHHHHHHHTTSTTCEEEEECT-----TCBEEEEEEHHHHH
T ss_pred hhhHHHHHHHhccccccHHHHhCC------CceEeCCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEEHHHHH
Confidence 0001234679999998 7889999999999999999999999999997 89999999999999
Q ss_pred HHhhc
Q 004241 757 LACRF 761 (766)
Q Consensus 757 ~~~~~ 761 (766)
+.+.+
T Consensus 152 ~~~~~ 156 (180)
T 3sl7_A 152 RAALQ 156 (180)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88643
No 33
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.66 E-value=6.1e-16 Score=160.26 Aligned_cols=136 Identities=18% Similarity=0.190 Sum_probs=107.5
Q ss_pred hccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCC--CcEEEEEehhhHHHHHHHHhhhccc--------
Q 004241 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND--NILIGLLTLGDIEEFSKYAQAKTSR-------- 689 (766)
Q Consensus 620 ~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~--g~lvGiVt~~dL~~~l~~~~~~~~~-------- 689 (766)
....++|+|+|+++++++.+++++.++.+.|.+++++.+||||++ ++++|+|+++||.+++.........
T Consensus 9 ~~~~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~~~ 88 (250)
T 2d4z_A 9 NKYNIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAAEA 88 (250)
T ss_dssp CCSSCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCCCB
T ss_pred ccCCCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhhcc
Confidence 456789999999999999999999999999999999999999974 6899999999999876543100000
Q ss_pred -----------------c--------------------------c-----------------------------------
Q 004241 690 -----------------S--------------------------K----------------------------------- 691 (766)
Q Consensus 690 -----------------~--------------------------~----------------------------------- 691 (766)
. +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (250)
T 2d4z_A 89 DEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASRFE 168 (250)
T ss_dssp CCC---------------------------------------------------------------------------CC
T ss_pred cccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcccc
Confidence 0 0
Q ss_pred --hhH-------hhhcccC-----CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHH
Q 004241 692 --LLV-------SEMCSAD-----GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 757 (766)
Q Consensus 692 --~~V-------~dvm~~~-----~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~ 757 (766)
... .+.|... ..+++.|.++.++++|.+++++|.+.+++++||++ +|+++||||++||++
T Consensus 169 ~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~------~GrLVGIVTrkDl~k 242 (250)
T 2d4z_A 169 EMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS------MGKLVGVVALAEIQA 242 (250)
T ss_dssp SCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHH
T ss_pred cccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE------CCEEEEEEEHHHHHH
Confidence 000 0011110 12344899999999999999999999999999998 699999999999999
Q ss_pred Hhhc
Q 004241 758 ACRF 761 (766)
Q Consensus 758 ~~~~ 761 (766)
++..
T Consensus 243 ai~~ 246 (250)
T 2d4z_A 243 AIEG 246 (250)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8753
No 34
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.65 E-value=5.8e-16 Score=144.52 Aligned_cols=123 Identities=19% Similarity=0.255 Sum_probs=108.1
Q ss_pred ccccccc---cceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccC
Q 004241 625 FVSEVMR---TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSAD 701 (766)
Q Consensus 625 ~V~diM~---~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~ 701 (766)
+++|+|+ +++.++++++++.++++.|.+++.+.+||+| +++++|+||.+|+.+.+.... ....+.+++++|.+
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~--~~~~~~~v~~~m~~- 82 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYLLD--KPVKDTQVKEIMTR- 82 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGGSS--SCGGGSBGGGTSBC-
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHHcC--CCcccCCHHHhccC-
Confidence 8999999 8999999999999999999999999999999 899999999999986432211 11235789999998
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 702 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 702 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++.++++++++.+++++|.+++.+++||+| +|+++|+||++|+++.+.++
T Consensus 83 -----~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 83 -----QVAYVDLNNTNEDCMALITEMRVRHLPVLD------DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp -----SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHHC-
T ss_pred -----CCeEECCCCcHHHHHHHHHHhCCCEEEEEe------CCEEEEEEEHHHHHHHHHhc
Confidence 789999999999999999999999999999 58999999999999987654
No 35
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.65 E-value=4e-16 Score=157.24 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=110.7
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHc---CCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhh
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE---KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM 697 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~---~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv 697 (766)
....+|+++|+++++++++++|+.++++.|+++ +.+.+||+|++++++|+||.+|+... ..+.+++++
T Consensus 51 ~~~~~v~~iM~~~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---------~~~~~v~~i 121 (205)
T 3kxr_A 51 YSENEIGRYTDHQMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEADKYLGTVRRYDIFKH---------EPHEPLISL 121 (205)
T ss_dssp SCTTCGGGGCBCCCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTTCBEEEEEEHHHHTTS---------CTTSBGGGG
T ss_pred CCcchHHhhccCceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCCCeEEEEEEHHHHHhC---------CCcchHHHH
Confidence 455689999999999999999999999999987 78899999999999999999998642 134679999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
|++ ++.++++++++.++++.|.+++.+.+||||+ +|+++|+||.+|+++.++++
T Consensus 122 m~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~-----~g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 122 LSE------DSRALTANTTLLDAAEAIEHSREIELPVIDD-----AGELIGRVTLRAATALVREH 175 (205)
T ss_dssp CCS------SCCCEETTSCHHHHHHHHHTSSCSEEEEECT-----TSBEEEEEEHHHHHHHHHHH
T ss_pred hcC------CCeEECCCCCHHHHHHHHHhcCCCEEEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 988 7899999999999999999999999999997 89999999999999988654
No 36
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.65 E-value=1.6e-15 Score=170.97 Aligned_cols=193 Identities=16% Similarity=0.174 Sum_probs=149.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---Cchh----HHHHHHHHHHHHHHH-HhcccccCCHHHHH
Q 004241 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNG---IPKA----VFPVMGGLAVGLIAL-MFPEILYWGFENVD 419 (766)
Q Consensus 348 ~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~---~~~~----~~~~lggllvg~i~~-~~P~~~g~G~~~i~ 419 (766)
..+...+++|+++|+++.+|.++.+++.+++........ .+.| ..+++++++++.+.. +.|+..|+|.+++.
T Consensus 34 ~~~~~~~liGv~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~~~p~a~GsGip~v~ 113 (465)
T 1ots_A 34 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 113 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhCccccCCChHHHH
Confidence 445678999999999999999999988877655432211 1112 334555666665554 67999999999999
Q ss_pred HHHccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHHHHHHhhhcCCCccccccccccch
Q 004241 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (766)
Q Consensus 420 ~ll~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~p 499 (766)
..+++.. ... .....+.|++.+.+|+++|.|.|+++|++.+||++|..+++.++. . +..+.
T Consensus 114 ~~l~~~~---~~~---~~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l---~----------~~~~~ 174 (465)
T 1ots_A 114 GALEDQR---PVR---WWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL---K----------GDEAR 174 (465)
T ss_dssp HHHTTCS---CCC---HHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC---C----------SHHHH
T ss_pred HHHhCCC---CCC---cHHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhcc---C----------CHHHH
Confidence 8887641 111 245678899999999999999999999999999999999998752 0 12456
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHh-CCch--h--HHHHHHHHHHHHHHHhhhccCCcch
Q 004241 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDYR--I--VLPLLGAVGLSSWFTSGQMRRRDVK 559 (766)
Q Consensus 500 ~~~alvGaaa~lag~~~aPls~~viv~Elt-g~~~--~--llP~mia~~va~~v~~~~~~~~~~~ 559 (766)
..+..||+||.+|+++++|++++++.+|.. ++++ . +.|.+++++++.++++.+...++.|
T Consensus 175 r~li~~GaaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~G~~~~f 239 (465)
T 1ots_A 175 HTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALI 239 (465)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHHSCSCCSS
T ss_pred HHHHHHHHHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCCcee
Confidence 789999999999999999999999999965 4444 5 8999999999999887665555544
No 37
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.65 E-value=7.9e-16 Score=152.02 Aligned_cols=125 Identities=14% Similarity=0.192 Sum_probs=111.6
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGE 703 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~ 703 (766)
++|+++|+++++++++++++.+|++.|.+++++.+||+|++|+++|+||.+|+.+.+... .....+.+++++|.+
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~--~~~~~~~~v~~im~~--- 83 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPR--NKKPDEVPIRLVMRK--- 83 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGG--CCCGGGSBGGGTSBS---
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhc--ccCcccCCHHHHhCC---
Confidence 789999999999999999999999999999999999999889999999999998765421 111234689999998
Q ss_pred CccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 704 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 704 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++++.+
T Consensus 84 ---~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 84 ---PIPKVKSDYDVKDVAAYLSENGLERCAVVDD-----PGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp ---SCCEEETTCBHHHHHHHHHHHTCSEEEEECT-----TCCEEEEEEHHHHTTTSCH
T ss_pred ---CCcEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHHHHHh
Confidence 7899999999999999999999999999996 7999999999999987755
No 38
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.64 E-value=1e-15 Score=146.13 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=112.6
Q ss_pred hhhhccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhh
Q 004241 617 VEELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSE 696 (766)
Q Consensus 617 ~~~~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~d 696 (766)
....++.++++++ +++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ....+.++.+
T Consensus 16 ~~~~l~~~~v~~~--~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~~--~~~~~~~v~~ 91 (152)
T 2uv4_A 16 MSKSLEELQIGTY--ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT--YNNLDVSVTK 91 (152)
T ss_dssp HTSBHHHHTCSBC--SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCSS--CCCTTSBGGG
T ss_pred HHhhHHHccCCcc--CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcchh--hhhhcchHHH
Confidence 3456777899998 78899999999999999999999999999999999999999999998765311 0112467899
Q ss_pred hcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 697 MCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 697 vm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
+|.....+.+++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.+
T Consensus 92 ~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 92 ALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDE-----NDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp GGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHC-
T ss_pred HHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 99621111116889999999999999999999999999997 7999999999999998743
No 39
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.64 E-value=3.8e-16 Score=150.25 Aligned_cols=131 Identities=15% Similarity=0.081 Sum_probs=111.8
Q ss_pred hhcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhh--hccccchhH
Q 004241 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA--KTSRSKLLV 694 (766)
Q Consensus 619 ~~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~--~~~~~~~~V 694 (766)
..+..++|+++|++ ++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+..... .....+.++
T Consensus 9 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v 88 (159)
T 1yav_A 9 DQLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITV 88 (159)
T ss_dssp --CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBH
T ss_pred HHHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCH
Confidence 34667899999998 89999999999999999999999999999999999999999999887643110 001234789
Q ss_pred hhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 695 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 695 ~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
+++|.+ ++.++++++++.+++++|.+++. +||+|+ +|+++|+||++|+++.+.+.
T Consensus 89 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~-----~g~~vGiit~~dil~~~~~~ 143 (159)
T 1yav_A 89 EEVMLT------DIPRLHINDPIMKGFGMVINNGF--VCVEND-----EQVFEGIFTRRVVLKELNKH 143 (159)
T ss_dssp HHHSBC------SCCEEETTSBHHHHHHHTTTCSE--EEEECT-----TCBEEEEEEHHHHHHHHHHH
T ss_pred HHhcCC------CCceEcCCCCHHHHHHHHHhCCE--EEEEeC-----CCeEEEEEEHHHHHHHHHHH
Confidence 999998 78999999999999999999876 999997 79999999999999987543
No 40
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.64 E-value=1.2e-15 Score=146.58 Aligned_cols=131 Identities=21% Similarity=0.235 Sum_probs=112.8
Q ss_pred hhccccccccccccceeEEeCCccHHHHHHHHHHcCCcE-EEEecCCCcEEEEEehhhHHHHHHHHh------------h
Q 004241 619 ELKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSC-AMIVDNDNILIGLLTLGDIEEFSKYAQ------------A 685 (766)
Q Consensus 619 ~~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~-~pVvd~~g~lvGiVt~~dL~~~l~~~~------------~ 685 (766)
+....++|+|+|+++++++++++++.+|++.|.+++.+. +||+|++ +++|+||.+|+.+.+.... .
T Consensus 11 ~~~~~~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~-~~vGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 89 (157)
T 1o50_A 11 HHMKVKDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN-KLVGMIPVMHLLKVSGFHFFGFIPKEELIRSS 89 (157)
T ss_dssp TTCBHHHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT-EEEEEEEHHHHHHHHHHHHHCCCC-------C
T ss_pred hhhccccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEECC-EEEEEEEHHHHHHHHhhhHHhhhccHHHHHHH
Confidence 456778999999999999999999999999999999999 9999988 9999999999998754210 0
Q ss_pred hccccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 686 KTSRSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 686 ~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
.....+.+++++|.+ +.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++|+++.+.++
T Consensus 90 ~~~~~~~~v~~im~~-------~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~~vGiit~~dll~~l~~~ 154 (157)
T 1o50_A 90 MKRLIAKNASEIMLD-------PVYVHMDTPLEEALKLMIDNNIQEMPVVDE-----KGEIVGDLNSLEILLALWKG 154 (157)
T ss_dssp CCCCSSCBHHHHCBC-------CCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHS
T ss_pred HHHHcCCcHHHHcCC-------CeEECCCCCHHHHHHHHHHCCCcEEEEEcC-----CCEEEEEEEHHHHHHHHHHh
Confidence 011234679999975 578999999999999999999999999997 78999999999999987643
No 41
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.64 E-value=1e-15 Score=149.92 Aligned_cols=125 Identities=13% Similarity=0.036 Sum_probs=109.5
Q ss_pred hhcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 619 ~~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
..+..++|+++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+||.+|+++..... .+.+++
T Consensus 31 l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~~~------~~~~v~ 104 (173)
T 3ocm_A 31 LTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLITE------GRVRRN 104 (173)
T ss_dssp HHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHHHH------SSCCGG
T ss_pred hccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHhcC------CcchhH
Confidence 34677899999974 68999999999999999999999999999987 8999999999999876542 135566
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
+| + ++.++++++++.+++++|.+++.+.+||+|+ +|+++|+||++||++++..+
T Consensus 105 -~~-~------~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde-----~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 105 -RL-R------DPIIVHESIGILRLMDTLKRSRGQLVLVADE-----FGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp -GS-B------CCCEECGGGCHHHHHHHHHHSTTCCEEEECT-----TCCEEEEECHHHHHHHHHCC
T ss_pred -hc-C------CCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-----CCCEEEEEeHHHHHHHHhCc
Confidence 44 5 5789999999999999999999999999997 89999999999999987543
No 42
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.64 E-value=9.7e-16 Score=150.83 Aligned_cols=133 Identities=19% Similarity=0.271 Sum_probs=112.8
Q ss_pred hhhccccccccccccc----eeEE--eCCccHHHHHHHHHHcCCcEEEEe--cCCCcEEEEEehhhHHHHHHHHhhh---
Q 004241 618 EELKRRVFVSEVMRTR----YVTV--LMTTLLIEALTLMLAEKQSCAMIV--DNDNILIGLLTLGDIEEFSKYAQAK--- 686 (766)
Q Consensus 618 ~~~l~~~~V~diM~~~----~~~V--~~~~tl~eal~~m~~~~~~~~pVv--d~~g~lvGiVt~~dL~~~l~~~~~~--- 686 (766)
++.++..+|+|+|+++ ++++ ++++++.+|++.|.+++++.+||+ |++++++|+||.+|+.+.+......
T Consensus 5 ~~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~ 84 (185)
T 2j9l_A 5 EEFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDG 84 (185)
T ss_dssp ----CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSC
T ss_pred hhhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCC
Confidence 3567789999999987 7888 999999999999999999999999 7889999999999999877643210
Q ss_pred ------------------ccccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEE
Q 004241 687 ------------------TSRSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVG 748 (766)
Q Consensus 687 ------------------~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvG 748 (766)
....+.++.++|.+ ++.++++++++.+++++|.+++.+++||+| +|+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd------~g~~vG 152 (185)
T 2j9l_A 85 VVSTSIIYFTEHSPPLPPYTPPTLKLRNILDL------SPFTVTDLTPMEIVVDIFRKLGLRQCLVTH------NGRLLG 152 (185)
T ss_dssp CCTTCEEECSSSCCCCCTTCCCCEECGGGEES------SCCEEETTSBHHHHHHHHHHHTCSEEEEEE------TTEEEE
T ss_pred ccccceeecccCCcccccccccCccHHHhhCc------CCeEeCCCCCHHHHHHHHHhCCCcEEEEEE------CCEEEE
Confidence 01234679999988 789999999999999999999999999998 689999
Q ss_pred EEeHHHHHHHhhcc
Q 004241 749 LLDRESIILACRFC 762 (766)
Q Consensus 749 IVt~~DIl~~~~~~ 762 (766)
+||++|+++.+.+.
T Consensus 153 iit~~dll~~l~~~ 166 (185)
T 2j9l_A 153 IITKKDVLKHIAQM 166 (185)
T ss_dssp EEEHHHHHHHHHHH
T ss_pred EEEHHHHHHHHHHh
Confidence 99999999987643
No 43
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=146.92 Aligned_cols=135 Identities=17% Similarity=0.168 Sum_probs=111.1
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecC--CCcEEEEEehhhHHHHHHHHhhh-ccccchhHhhh
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSKYAQAK-TSRSKLLVSEM 697 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~--~g~lvGiVt~~dL~~~l~~~~~~-~~~~~~~V~dv 697 (766)
...++|+|+|+++++++++++++.++++.|.+++.+.+||+|+ +++++|+||.+|+.+.+...... ....+.++.++
T Consensus 10 ~~~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~v~~~ 89 (164)
T 2pfi_A 10 SHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDI 89 (164)
T ss_dssp CCSCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCCCBHHHH
T ss_pred ccCCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCcccchhhhh
Confidence 4568899999999999999999999999999999999999996 79999999999999876432111 00123578999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
|.++......+.++++++++.+++++|.+++.+++||+| +|+++|+||++||++.+.+
T Consensus 90 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~l~Giit~~dil~~~~~ 147 (164)
T 2pfi_A 90 LARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS------RGRAVGCVSWVEMKKAISN 147 (164)
T ss_dssp HHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHHHH
T ss_pred hcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE------CCEEEEEEEHHHHHHHHHh
Confidence 987211111168999999999999999999999999999 5899999999999988754
No 44
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.64 E-value=6.7e-16 Score=147.88 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=110.2
Q ss_pred hhcccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhh--hccccchhH
Q 004241 619 ELKRRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQA--KTSRSKLLV 694 (766)
Q Consensus 619 ~~l~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~--~~~~~~~~V 694 (766)
..+..++|+|+|.+ ++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+..... .....+.++
T Consensus 6 ~~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v 85 (157)
T 2emq_A 6 NEFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKV 85 (157)
T ss_dssp ----CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBG
T ss_pred hhHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcH
Confidence 34677899999997 89999999999999999999999999999999999999999999876532100 001134679
Q ss_pred hhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 695 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 695 ~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
+++|.+ ++.++++++++.++++.|.+++. +||+|+ +|+++|+||++|+++.+.+.
T Consensus 86 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~-----~g~~~Giit~~dil~~~~~~ 140 (157)
T 2emq_A 86 EEVMNR------NIPRLRLDDSLMKAVGLIVNHPF--VCVEND-----DGYFAGIFTRREVLKQLNKQ 140 (157)
T ss_dssp GGTCBC------CCCEEETTSBHHHHHHHHHHSSE--EEEECS-----SSSEEEEEEHHHHHHHHHHT
T ss_pred HHHhCC------CCceecCCCcHHHHHHHHhhCCE--EEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 999998 78999999999999999999987 999997 78999999999999987654
No 45
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.63 E-value=3.7e-15 Score=167.55 Aligned_cols=193 Identities=18% Similarity=0.232 Sum_probs=146.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCchhHHHHH-HH---HHHHHHH-HHhcccccCCHHHHH
Q 004241 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDN---GIPKAVFPVM-GG---LAVGLIA-LMFPEILYWGFENVD 419 (766)
Q Consensus 348 ~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~---~~~~~~~~~l-gg---llvg~i~-~~~P~~~g~G~~~i~ 419 (766)
..+...+++|+++|+++.+|.++..+..+++....... +++.|+.+++ ++ ++.+.+. .+.|+..|+|.++++
T Consensus 30 ~l~l~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~l~~~~~p~a~GsGIp~v~ 109 (466)
T 3nd0_A 30 RTLVAAIVVGLITGVLGAGFKSAVNNMLQWRSQLAQILAPIPPLAWLVTALISGGMVALSFWLMKRFAPDTSGSGIPQIE 109 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCTHHHHHHHHHHHHHHHHHHHHHTTTCGGGSBCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCCCCHHHHH
Confidence 34667899999999999999999999888766543322 2222333332 22 2222222 346999999999998
Q ss_pred HHHccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHHHHHHhhhcCCCccccccccccch
Q 004241 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (766)
Q Consensus 420 ~ll~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~p 499 (766)
..+++.. ... .......|++.+.+|+++|.|.|+++|++.+||++|..+++.++. +..+.
T Consensus 110 ~~l~g~~---~~~---~~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~--------------~~~~~ 169 (466)
T 3nd0_A 110 GHLEGKL---PLV---WQRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKA--------------TQENQ 169 (466)
T ss_dssp HHTTSSS---CCC---HHHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTC--------------CHHHH
T ss_pred HHHcCCC---CCc---hHHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCC--------------ChhHH
Confidence 8887641 111 234577899999999999999999999999999999999998763 12356
Q ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHh-CCch----hHHHHHHHHHHHHHHHhhhccCCcchh
Q 004241 500 QAYGLVGMAATLAGVCQVPLTSVLLLFELT-QDYR----IVLPLLGAVGLSSWFTSGQMRRRDVKE 560 (766)
Q Consensus 500 ~~~alvGaaa~lag~~~aPls~~viv~Elt-g~~~----~llP~mia~~va~~v~~~~~~~~~~~~ 560 (766)
..+..||+||.+++++++|++++++.+|.. ++++ .+.|.+++++++.++++.+..+++.|.
T Consensus 170 r~ll~aGaAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~f~ 235 (466)
T 3nd0_A 170 RILIAVGAGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMIRGQSAIIS 235 (466)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHHTCSSCSSC
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHHcCCCCcee
Confidence 889999999999999999999999999964 5552 367999999999998877765555544
No 46
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.63 E-value=1.6e-15 Score=142.69 Aligned_cols=132 Identities=20% Similarity=0.233 Sum_probs=107.9
Q ss_pred cccccc---ccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcc
Q 004241 623 RVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCS 699 (766)
Q Consensus 623 ~~~V~d---iM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~ 699 (766)
+.++++ +|.+++.++++++++.++++.|.+++.+.+||+|++++++|+|+.+|+.+.+.... ....+.++.++|.
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~--~~~~~~~v~~~m~ 84 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGI--YNDLSLSVGEALM 84 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHTC------CCSBHHHHHH
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcccc--cccCCccHHHHHh
Confidence 345666 88889999999999999999999999999999999999999999999998765311 0123468999997
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 700 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 700 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
+.+...+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++.+.+
T Consensus 85 ~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 85 RRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-----VGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HCC------CEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred cCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 51100013689999999999999999999999999997 7999999999999998754
No 47
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.62 E-value=1.2e-14 Score=162.97 Aligned_cols=193 Identities=15% Similarity=0.167 Sum_probs=145.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCchh---HHH----HHHHHHHHHHH-HHhcccccCCHHHHH
Q 004241 348 GELPLYLLLGVLCGLISLTLSRCTTYMLAIVDNLQKDNGIPKA---VFP----VMGGLAVGLIA-LMFPEILYWGFENVD 419 (766)
Q Consensus 348 ~el~~~i~lGv~~Gl~g~~f~~~~~~~~~~~~~~~~~~~~~~~---~~~----~lggllvg~i~-~~~P~~~g~G~~~i~ 419 (766)
..+...+++|+++|+++.+|..+.+++.+++...........+ ..+ .+++++.+.+. .+.|+..|+|.++++
T Consensus 19 ~~~~~~~liGi~~Gl~~~~f~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~p~a~GsGip~v~ 98 (446)
T 4ene_A 19 AILFMAAVVGTLVGLAAVAFDKGVAWLQNQRMGALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAPEAGGSGIPEIE 98 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSSCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCcccCCCCHHHHH
Confidence 4566789999999999999999999988876654332221111 111 12334444443 346999999999998
Q ss_pred HHHccCCCcccccHHHHHHHHHHHHHHHHHhhhcCCccceechHhHHHHHHhHHHHHHHHHhhhcCCCccccccccccch
Q 004241 420 ILLESRPFVKGLTADMLLQLVAAKIVATSLCRASGLVGGYYAPSLFIGAATGMAYGKFINFAIAQSNPTIHFSILEVASP 499 (766)
Q Consensus 420 ~ll~~~~~~~~~~~~~l~~~~~~K~~~t~lt~gsG~~gG~f~Psl~iGa~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~p 499 (766)
..+++. .... .......|++.+.+|+++|.|.|+++|++.+||++|..+++.++. +..+.
T Consensus 99 ~~l~~~---~~~~---~~r~~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~--------------~~~~~ 158 (446)
T 4ene_A 99 GALEDQ---RPVR---WWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRL--------------KGDEA 158 (446)
T ss_dssp HHHHTC---SCCC---HHHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTC--------------CSHHH
T ss_pred HHHhCC---Cccc---hHHHHHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCC--------------CHHHH
Confidence 888764 1222 134567899999999999999999999999999999999998763 12344
Q ss_pred H-HHHHHHHHHHHHHhcCchHHHHHHHHHHh-CCc----hhHHHHHHHHHHHHHHHhhhccCCcchh
Q 004241 500 Q-AYGLVGMAATLAGVCQVPLTSVLLLFELT-QDY----RIVLPLLGAVGLSSWFTSGQMRRRDVKE 560 (766)
Q Consensus 500 ~-~~alvGaaa~lag~~~aPls~~viv~Elt-g~~----~~llP~mia~~va~~v~~~~~~~~~~~~ 560 (766)
. .+..||+||.+++++++|++++++.+|.. +++ ..+.|.+++++++.++++.+..+++.|+
T Consensus 159 r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~~g~~~~~~ 225 (446)
T 4ene_A 159 RHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIFNHEVALID 225 (446)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSCSSSCCCCCHHHHHHHHHHHHHHHHHTTTTCCSCC
T ss_pred HHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHcCCCceee
Confidence 4 89999999999999999999999999975 333 3489999999999998877655554443
No 48
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.61 E-value=2.2e-15 Score=144.54 Aligned_cols=124 Identities=19% Similarity=0.285 Sum_probs=108.6
Q ss_pred cccccccc------cceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhh
Q 004241 624 VFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM 697 (766)
Q Consensus 624 ~~V~diM~------~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv 697 (766)
.+|+|+|+ +++.++++++++.+|++.|.+++++.+||+| +++++|+||.+|+.+.+..... ...+.+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~~~~~Givt~~dl~~~~~~~~~--~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQER--SSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-SSSEEEEEEHHHHHHHSGGGTC--CSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-CCEEEEEEEHHHHHHHHHhccC--CccccCHHHH
Confidence 47999999 4569999999999999999999999999955 8999999999999987643211 1235789999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
|.+ ++.++++++++.+++++|.+++.+++||+| +|+++|+||++|+++.+.++
T Consensus 84 m~~------~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd------~g~~~Giit~~dil~~l~~~ 136 (157)
T 4fry_A 84 MTA------KVRYVEPSQSTDECMALMTEHRMRHLPVLD------GGKLIGLISIGDLVKSVIAD 136 (157)
T ss_dssp SBS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHHTT
T ss_pred cCC------CCcEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHHHH
Confidence 998 788999999999999999999999999999 58999999999999987654
No 49
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.61 E-value=1.1e-15 Score=158.08 Aligned_cols=128 Identities=16% Similarity=0.171 Sum_probs=104.7
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhc---------------
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT--------------- 687 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~--------------- 687 (766)
..+|+|+|++++.++++++++.+|++.|.+++++.+||+|++|+++|++|.+|+.+.+.......
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v~~~ 85 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDIWDSNILAKSATSLDNILDT 85 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHHHHH
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHHHHH
Confidence 45899999999999999999999999999999999999999999999999999998764211000
Q ss_pred --------------------------------------------------------------------------------
Q 004241 688 -------------------------------------------------------------------------------- 687 (766)
Q Consensus 688 -------------------------------------------------------------------------------- 687 (766)
T Consensus 86 l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~ 165 (245)
T 3l2b_A 86 LSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNI 165 (245)
T ss_dssp TTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTC
T ss_pred hCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCC
Confidence
Q ss_pred ---------------cccchhHhhhcc-cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEe
Q 004241 688 ---------------SRSKLLVSEMCS-ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLD 751 (766)
Q Consensus 688 ---------------~~~~~~V~dvm~-~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt 751 (766)
.....+++++|+ + ++.++++++++.+++++|.+++++++||+|+ +|+++|+||
T Consensus 166 ~~i~t~~d~~~~~~~~~~~~~v~~im~~~------~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~~~~Giit 234 (245)
T 3l2b_A 166 TVITTPHDSFTASRLIVQSLPVDYVMTKD------NLVAVSTDDLVEDVKVTMSETRYSNYPVIDE-----NNKVVGSIA 234 (245)
T ss_dssp EEEECSSCHHHHHHHGGGGSBHHHHSBCT------TCCCEETTSBHHHHHHHHHHHCCSEEEEECT-----TCBEEEEEE
T ss_pred eEEEeCCChHHHHHHHhcCCceeeEecCC------ccEEECCCCcHHHHHHHHHhcCCceEEEEcC-----CCeEEEEEE
Confidence 011346889998 6 7899999999999999999999999999997 799999999
Q ss_pred HHHHHHHhhc
Q 004241 752 RESIILACRF 761 (766)
Q Consensus 752 ~~DIl~~~~~ 761 (766)
++|++++.++
T Consensus 235 ~~dll~~~~~ 244 (245)
T 3l2b_A 235 RFHLISTHKK 244 (245)
T ss_dssp CC--------
T ss_pred HHHhhchhhc
Confidence 9999998765
No 50
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.59 E-value=3.7e-15 Score=150.99 Aligned_cols=119 Identities=18% Similarity=0.143 Sum_probs=108.4
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCC
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADG 702 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~ 702 (766)
..+++++|.++++++++++|+.|+++.|.+++.+.+||+|++++++|+||.+|+.+... +.+++++|++
T Consensus 12 ~~~~~~~~~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~---------~~~v~~im~~-- 80 (213)
T 1vr9_A 12 HMKVKKWVTQDFPMVEESATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDL---------DSSVFNKVSL-- 80 (213)
T ss_dssp -CBGGGGCBSCSCEEETTCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCT---------TSBSGGGCBC--
T ss_pred ccCHHHhhcCCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcC---------CCcHHHHccC--
Confidence 45789999999999999999999999999999999999998999999999999975432 3679999998
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 703 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 703 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++.++++++++.+++++|.+++.+++||+|+ +|+++|+||.+|+++.+..
T Consensus 81 ----~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 81 ----PDFFVHEEDNITHALLLFLEHQEPYLPVVDE-----EMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp ----TTCCEETTSBHHHHHHHHHHCCCSEEEEECT-----TCBEEEEEEHHHHHHHHHH
T ss_pred ----CCEEECCCCcHHHHHHHHHHhCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHH
Confidence 7899999999999999999999999999996 7999999999999987653
No 51
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.56 E-value=1.3e-14 Score=153.94 Aligned_cols=130 Identities=17% Similarity=0.156 Sum_probs=114.6
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhh---ccccchhHhhhc
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAK---TSRSKLLVSEMC 698 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~---~~~~~~~V~dvm 698 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+...... ....+.++.++|
T Consensus 154 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v~~~m 233 (296)
T 3ddj_A 154 EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVVKDVM 233 (296)
T ss_dssp CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBHHHHS
T ss_pred ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCHHHHh
Confidence 34589999999999999999999999999999999999999999999999999999887632211 111346899999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 699 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 699 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++ ++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++||++++.++
T Consensus 234 ~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 234 VT------NLVTIDELASVNRAAAEMIVKRIGSLLILNK-----DNTIRGIITERDLLIALHHI 286 (296)
T ss_dssp BC------CCCBCCTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHH
T ss_pred CC------CCeEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEcHHHHHHHHHHH
Confidence 98 7899999999999999999999999999997 79999999999999987643
No 52
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.56 E-value=6.1e-15 Score=156.31 Aligned_cols=122 Identities=16% Similarity=0.240 Sum_probs=110.5
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHc-----CCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~-----~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
....+|+++|+++++++++++|+.++++.|.++ +++.+||+|++++++|+||.+|+.+. ..+.+++
T Consensus 134 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~~~lvGivt~~dll~~---------~~~~~v~ 204 (286)
T 2oux_A 134 YEDETAGAIMTTEFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQENHLVGVISLRDLIVN---------DDDTLIA 204 (286)
T ss_dssp SCTTBHHHHCBSCCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTTCBEEEEEEHHHHTTS---------CTTSBHH
T ss_pred CChHHHHHhCCCCceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCCCeEEEEEEHHHHHcC---------CCCCcHH
Confidence 345689999999999999999999999999987 78889999999999999999998753 1347899
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++|.+ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||.+|+++.+.++
T Consensus 205 ~im~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIT~~Dil~~i~~e 260 (286)
T 2oux_A 205 DILNE------RVISVHVGDDQEDVAQTIRDYDFLAVPVTDY-----DDHLLGIVTVDDIIDVIDDE 260 (286)
T ss_dssp HHSBS------CCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHHH
T ss_pred HHcCC------CCeeecCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHHHHHHH
Confidence 99988 7899999999999999999999999999997 89999999999999987654
No 53
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.54 E-value=1.5e-14 Score=152.65 Aligned_cols=122 Identities=21% Similarity=0.263 Sum_probs=108.6
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHc-----CCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~-----~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
....+++++|+++++++++++++.++++.|.++ +.+.+||+|++++++|+||.+|+... ..+.+++
T Consensus 132 ~~~~~v~~iM~~~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~~~lvGivt~~dll~~---------~~~~~v~ 202 (278)
T 2yvy_A 132 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---------DPRTRVA 202 (278)
T ss_dssp SCTTBGGGTCBSCCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTTCBEEEEEEHHHHHHS---------CTTCBST
T ss_pred CCcchHHhhcCCCceEECCCCcHHHHHHHHHHccCCccceeEEEEECCCCCEEEEEEHHHHhcC---------CCCCcHH
Confidence 345689999999999999999999999999987 68999999999999999999998753 1346899
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++|.+ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||.+|+++.+.++
T Consensus 203 ~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~g~lvGivT~~Dil~~i~~e 258 (278)
T 2yvy_A 203 EIMNP------KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-----EGRLVGIVTVDDVLDVLEAE 258 (278)
T ss_dssp TTSBS------SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHC---
T ss_pred HHhCC------CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeC-----CCeEEEEEEHHHHHHHHHHH
Confidence 99988 7899999999999999999999999999997 79999999999999987654
No 54
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.54 E-value=5.3e-14 Score=151.16 Aligned_cols=134 Identities=20% Similarity=0.212 Sum_probs=114.7
Q ss_pred ccccccccc---cccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhh
Q 004241 621 KRRVFVSEV---MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM 697 (766)
Q Consensus 621 l~~~~V~di---M~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv 697 (766)
....+++++ |.+++.++++++++.++++.|.+++++.+||+|++|+++|+||.+|+.+.+..... ...+.+++++
T Consensus 184 ~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dl~~~~~~~~~--~~~~~~v~~~ 261 (323)
T 3t4n_C 184 FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKGGIY--NDLSLSVGEA 261 (323)
T ss_dssp GCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETTHHHHHHHTTHH--HHTTSBHHHH
T ss_pred hhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHhhchh--hhccCCHHHH
Confidence 345689999 98999999999999999999999999999999999999999999999988754221 1234689999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
|++.+...+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++..
T Consensus 262 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~~~l~Giit~~Dil~~l~~ 320 (323)
T 3t4n_C 262 LMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD-----VGRLVGVLTLSDILKYILL 320 (323)
T ss_dssp GGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred HhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECC-----CCcEEEEEEHHHHHHHHHh
Confidence 9873221124789999999999999999999999999997 7999999999999998754
No 55
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=2.4e-14 Score=150.44 Aligned_cols=130 Identities=22% Similarity=0.295 Sum_probs=109.3
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHH------HHHH------HH------
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE------EFSK------YA------ 683 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~------~~l~------~~------ 683 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|++|.+|+. +.+. ..
T Consensus 124 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (282)
T 2yzq_A 124 KGVEIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLRDSEIVRIMKSTELAASSEEEWIL 203 (282)
T ss_dssp GGCBSTTTSBSCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGGGCGGGCC-----------------
T ss_pred ccCcHHHHhCCCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhhhhc
Confidence 35688999999999999999999999999999999999999999999999999998 4442 00
Q ss_pred -h--------hhccccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHH
Q 004241 684 -Q--------AKTSRSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRES 754 (766)
Q Consensus 684 -~--------~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~D 754 (766)
. ......+.+++++|++ ++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~v~~im~~------~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-----~~~lvGiit~~D 272 (282)
T 2yzq_A 204 ESHPTLLFEKFELQLPNKPVAEIMTR------DVIVATPHMTVHEVALKMAKYSIEQLPVIRG-----EGDLIGLIRDFD 272 (282)
T ss_dssp ---------------CCCBGGGTCBS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEEET-----TTEEEEEEEHHH
T ss_pred ccchHHHHhHhhhhhccCCHHHhcCC------CCceeCCCCCHHHHHHHHHHcCcceeEEECC-----CCCEEEEEeHHH
Confidence 0 0011134779999998 7899999999999999999999999999996 789999999999
Q ss_pred HHHHhhcc
Q 004241 755 IILACRFC 762 (766)
Q Consensus 755 Il~~~~~~ 762 (766)
+++.+.++
T Consensus 273 il~~~~~~ 280 (282)
T 2yzq_A 273 LLKVLVKS 280 (282)
T ss_dssp HGGGGCC-
T ss_pred HHHHHHhh
Confidence 99987643
No 56
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.51 E-value=4.5e-14 Score=147.97 Aligned_cols=125 Identities=14% Similarity=0.163 Sum_probs=109.5
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhc--------cccchhH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKT--------SRSKLLV 694 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~--------~~~~~~V 694 (766)
..+++++|++++.++++++++.++++.|.+++.+.+||+ ++|+++|+||.+|+.+.+....... ...+.++
T Consensus 147 ~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~~~v 225 (280)
T 3kh5_A 147 NEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKLLGSDWAFNHMQTGNVREITNVRM 225 (280)
T ss_dssp TCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHHHTSHHHHHHHHSCCTHHHHHCBH
T ss_pred CCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHHHhhhhhhhhhcccchhhhhCCcH
Confidence 358999999999999999999999999999999999999 6899999999999998774321100 0134679
Q ss_pred hhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHh
Q 004241 695 SEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 759 (766)
Q Consensus 695 ~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~ 759 (766)
+++|++ ++.++++++++.+|++.|.+++.+++||+|+ +|+++|+||++||++++
T Consensus 226 ~~~m~~------~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 226 EEIMKR------DVITAKEGDKLKKIAEIMVTNDIGALPVVDE-----NLRIKGIITEKDVLKYF 279 (280)
T ss_dssp HHHSBS------SCCCBCTTCBHHHHHHHHHHHTCCEEEEECT-----TCBEEEEEEHHHHGGGG
T ss_pred HHHhcC------CCEEECCCCCHHHHHHHHHHCCCCEEEEECC-----CCeEEEEEeHHHHHHhh
Confidence 999988 7899999999999999999999999999997 78999999999999875
No 57
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.51 E-value=3.7e-14 Score=163.05 Aligned_cols=133 Identities=11% Similarity=0.022 Sum_probs=113.9
Q ss_pred hhhccccccccccccceeEEeCC-ccHHHHHHHHHHcCCcEEEEec-CCCcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 618 EELKRRVFVSEVMRTRYVTVLMT-TLLIEALTLMLAEKQSCAMIVD-NDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 618 ~~~l~~~~V~diM~~~~~~V~~~-~tl~eal~~m~~~~~~~~pVvd-~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
+..+...+|+|+|++++++++++ +++.|+++.|.+++++.+||+| ++++++|+||.+|+++.+.... ...+.+|+
T Consensus 378 ~~~l~~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~---~~~~~~V~ 454 (527)
T 3pc3_A 378 GHWWWSLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMN---RQQSDPAI 454 (527)
T ss_dssp CCTTTTSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHC---CCTTSBGG
T ss_pred cccccCCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhcc---CcCCCcHH
Confidence 34577889999999999999999 9999999999999999999999 7899999999999998876521 22357899
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
++|++ ++.++++++++.+++++|.+++. +||||++. ..+|+++||||++||++.+.+.
T Consensus 455 ~im~~------~~~~v~~~~~l~~a~~~m~~~~~--~pVVd~~~-~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 455 KALNK------RVIRLNESEILGKLARVLEVDPS--VLILGKNP-AGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp GGEET------TCCEEETTSBHHHHHHHHTTCSE--EEEEEECS-SSCEEEEEEEEHHHHHHHHHTC
T ss_pred HHhcC------CCeEECCCCcHHHHHHHHhhCCE--EEEEeCCc-ccCCeEEEEEEHHHHHHHHHhc
Confidence 99998 78999999999999999987765 79999610 0028999999999999988654
No 58
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.49 E-value=1.6e-13 Score=143.80 Aligned_cols=122 Identities=25% Similarity=0.298 Sum_probs=110.1
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCC
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADG 702 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~ 702 (766)
+.+++++|++++.++++++++.++++.|.+++++.+||+|++|+++|++|.+|+.+.+.... ..+.+++++|.+
T Consensus 83 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~----~~~~~v~~~m~~-- 156 (280)
T 3kh5_A 83 NEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI----DENEVIDDYITR-- 156 (280)
T ss_dssp TSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS----CTTCBSGGGCBC--
T ss_pred hhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC----CCCCCHHHHhCC--
Confidence 46899999999999999999999999999999999999999999999999999998765321 123578999988
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 703 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 703 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
++.++++++++.++++.|.+++.+++||++ +|+++|+||.+|+++...
T Consensus 157 ----~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~------~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 157 ----DVIVATPGERLKDVARTMVRNGFRRLPVVS------EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp ----SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHHHHT
T ss_pred ----CCeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHh
Confidence 788999999999999999999999999995 789999999999998864
No 59
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.49 E-value=8.1e-14 Score=147.80 Aligned_cols=122 Identities=21% Similarity=0.221 Sum_probs=110.9
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCC
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADG 702 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~ 702 (766)
..+++++|++++.++.+++++.++++.|.+++++.+||+|++++++|++|.+|+.+.+.. .....+++++|.+
T Consensus 92 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~lvGivt~~dl~~~~~~-----~~~~~~v~~~m~~-- 164 (296)
T 3ddj_A 92 TTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFLLLYKD-----LDEIFPVKVFMST-- 164 (296)
T ss_dssp TSBGGGTSEESCCCEETTSCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHGGGGGG-----SCCCCBHHHHSBC--
T ss_pred cccHHHhccCCCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHhhhc-----ccccccHHHhhcC--
Confidence 568999999999999999999999999999999999999999999999999999876532 1234689999988
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 703 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 703 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||.+|+++.+.
T Consensus 165 ----~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 165 ----KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD-----DNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp ----SCCCEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHH
T ss_pred ----CCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHH
Confidence 7899999999999999999999999999997 799999999999998764
No 60
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.48 E-value=7.8e-14 Score=157.85 Aligned_cols=121 Identities=21% Similarity=0.273 Sum_probs=109.4
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHc-----CCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAE-----KQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~-----~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
....+++++|+++++++++++|++|+++.|+++ +.+.+||+|++++++|+||.+|+... ..+.+++
T Consensus 152 ~~~~~v~~iM~~~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~~~lvGiVt~~Dll~~---------~~~~~v~ 222 (473)
T 2zy9_A 152 YEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEKGRLKGVLSLRDLIVA---------DPRTRVA 222 (473)
T ss_dssp SCTTBSTTTCBSCEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTTSBEEEEEEHHHHHHS---------CTTSBGG
T ss_pred CCCCCHHHhCCCCceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCCCcEEEEEEHHHHhcC---------CCCCcHH
Confidence 355789999999999999999999999999986 46899999999999999999999752 1347899
Q ss_pred hhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 696 EMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 696 dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++|++ ++.++++++++.++.+.|.+++.+.+||||+ +|+++|+||.+|+++.+.+
T Consensus 223 dim~~------~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe-----~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 223 EIMNP------KVVYVRTDTDQEEVARLMADYDFTVLPVVDE-----EGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp GTSBS------SCCCEESSSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred HHhCC------CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcC-----CCEEEEEEehHhhHHHHHH
Confidence 99988 7899999999999999999999999999997 8999999999999988754
No 61
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.46 E-value=3.3e-13 Score=145.70 Aligned_cols=134 Identities=18% Similarity=0.141 Sum_probs=112.0
Q ss_pred ccccccc---ccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhc
Q 004241 622 RRVFVSE---VMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMC 698 (766)
Q Consensus 622 ~~~~V~d---iM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm 698 (766)
...++++ +|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... ....+.++.++|
T Consensus 180 ~~~~v~~l~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~--~~~~~~~v~~~m 257 (334)
T 2qrd_G 180 LRVPLNQMTIGTWSNLATASMETKVYDVIKMLAEKNISAVPIVNSEGTLLNVYESVDVMHLIQDGD--YSNLDLSVGEAL 257 (334)
T ss_dssp CCCBGGGSSCSBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEETHHHHHHHTTSC--GGGGGSBHHHHH
T ss_pred hhCcHHHhCCcccCCceEECCCCcHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEHHHHHHHhhccc--cccccCcHHHHH
Confidence 3467888 58899999999999999999999999999999999999999999999998764311 012346799999
Q ss_pred ccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 699 SADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 699 ~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
.+.....+++.++++++++.+++++|.+++.+++||||+ +|+++|+||++|+++.+.++
T Consensus 258 ~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-----~g~l~Giit~~dil~~~~~~ 316 (334)
T 2qrd_G 258 LKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDE-----NLKLEGILSLADILNYIIYD 316 (334)
T ss_dssp TTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECT-----TCBEEEEEEHHHHHHHHHSC
T ss_pred hcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEeHHHHHHHHHhc
Confidence 831000015789999999999999999999999999997 79999999999999987654
No 62
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.45 E-value=9e-14 Score=146.09 Aligned_cols=117 Identities=23% Similarity=0.227 Sum_probs=89.3
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGE 703 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~ 703 (766)
++|+++|++++.++++++++.+|++.|.+++++.+||+|++|+++|+++.+|+.+... +.+++++|.+
T Consensus 1 m~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~~~~~Giv~~~dl~~~~~---------~~~v~~~m~~--- 68 (282)
T 2yzq_A 1 MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNPD---------EEQLAMLVKR--- 68 (282)
T ss_dssp CBHHHHSEESCCCEESSCC------------CCEEEEECTTCCEEEEEESSCC-------------------CCCBS---
T ss_pred CchHHhccCCCeEECCCCcHHHHHHHHHHcCCCeEEEEcCCCcEEEEEEHHHHHhhhc---------cCCHHHHcCC---
Confidence 4789999999999999999999999999999999999998999999999999986542 3678999988
Q ss_pred CccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHH-Hhh
Q 004241 704 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL-ACR 760 (766)
Q Consensus 704 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~-~~~ 760 (766)
++.++++++++.++++.|.+++.+.+||+|+ +|+++|++|.+|+++ .+.
T Consensus 69 ---~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 69 ---DVPVVKENDTLKKAAKLMLEYDYRRVVVVDS-----KGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp ---CCCEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHTTT
T ss_pred ---CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHh
Confidence 7889999999999999999999999999997 789999999999998 664
No 63
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.40 E-value=8.5e-13 Score=141.73 Aligned_cols=127 Identities=16% Similarity=0.191 Sum_probs=106.2
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCc-----EEEEEehhhHHHHHHHHhhhccccchhHhhh-
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNI-----LIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM- 697 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~-----lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv- 697 (766)
+++.++|.++++++++++++.++++.|.+++.+.+||+|++++ ++|++|.+|+.+.+..........+.+++++
T Consensus 114 ~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt~~di~~~l~~~~~~~~~~~~~v~~~~ 193 (323)
T 3t4n_C 114 ERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLTQYRILKFVALNCRETHFLKIPIGDLN 193 (323)
T ss_dssp HHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEEHHHHHHHHHHHCGGGGGCCSBGGGTT
T ss_pred HHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEecHHHHHHHHHhcCCchhhhhCcHHHcC
Confidence 3456677889999999999999999999999999999998875 9999999999988764322222234688999
Q ss_pred --cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 698 --CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 698 --m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
|.+ ++.++++++++.++++.|.+++.+++||+|+ +|+++|+||.+|+++...+
T Consensus 194 ~~m~~------~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~~~~Giit~~dl~~~~~~ 248 (323)
T 3t4n_C 194 IITQD------NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-----NGYLINVYEAYDVLGLIKG 248 (323)
T ss_dssp CSBCT------TCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEETTHHHHHHHT
T ss_pred CCCCC------CcEEECCCCcHHHHHHHHHHcCCCEEEEECC-----CCeEEEEEeHHHHHHHHhh
Confidence 877 7899999999999999999999999999997 7999999999999987643
No 64
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.38 E-value=1.9e-12 Score=139.58 Aligned_cols=134 Identities=13% Similarity=0.185 Sum_probs=110.6
Q ss_pred hhhhcccccccccc--ccceeEEeCCccHHHHHHHHHHcCCcEEEEecCC-CcEEEEEehhhHHHHHHHHhhh-c----c
Q 004241 617 VEELKRRVFVSEVM--RTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND-NILIGLLTLGDIEEFSKYAQAK-T----S 688 (766)
Q Consensus 617 ~~~~l~~~~V~diM--~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~-g~lvGiVt~~dL~~~l~~~~~~-~----~ 688 (766)
-.+.+.+.+|+|+| +++++++++++++.+|++.|.+++++.+||+|++ ++++|++|.+|+.+.+...... . .
T Consensus 28 ~~~~l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll~~l~~~~~~~~~~~~~ 107 (330)
T 2v8q_E 28 YTTFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYKSALVQIYE 107 (330)
T ss_dssp HHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHHHHHHHHHHHHTTTCCC
T ss_pred HHHHHHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHHHHHHHHHhccccchhH
Confidence 34567888999999 7789999999999999999999999999999987 7999999999999876432110 0 0
Q ss_pred ccc-------hhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 689 RSK-------LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 689 ~~~-------~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
..+ ..++++|.+ ++.++++++++.++++.|.+++.+++||+|++ +|+++|+||.+|+++...
T Consensus 108 l~~~~~~~~~~~~~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~----~~~~~Givt~~dl~~~~~ 176 (330)
T 2v8q_E 108 LEEHKIETWREVYLQDSFK------PLVCISPNASLFDAVSSLIRNKIHRLPVIDPE----SGNTLYILTHKRILKFLK 176 (330)
T ss_dssp GGGCBHHHHHHHHSSSSCC------CCCCBCTTSBHHHHHHHHHHHTCSCEEEECTT----TCCEEEEECHHHHHHHHH
T ss_pred HhhccHHHHHHHHhhcccC------CceEeCCCCCHHHHHHHHHHCCCCeEEEEeCC----CCcEEEEEcHHHHHHHHH
Confidence 011 123456776 78999999999999999999999999999941 478999999999998764
No 65
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.37 E-value=1.3e-12 Score=148.88 Aligned_cols=124 Identities=19% Similarity=0.253 Sum_probs=109.7
Q ss_pred hccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecC--CCcEEEEEehhhHHHHHHHHhhhccccchhHhhh
Q 004241 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN--DNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM 697 (766)
Q Consensus 620 ~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~--~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv 697 (766)
..+-++.++.|.++++++++++|+.|+++.|.+++++.+||+|+ +++++|+||.+|++.. ...+.+++++
T Consensus 109 V~~V~~~~~~m~~d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rDl~~~--------~~~~~~V~~v 180 (511)
T 3usb_A 109 VDKVKRSESGVISDPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFI--------QDYSIKISDV 180 (511)
T ss_dssp HHHHHTSSSCSSSSCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHHHTTC--------CCSSSBHHHH
T ss_pred HHHhhccccccccCCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehHhhhh--------ccCCCcHHHh
Confidence 33445678889999999999999999999999999999999998 8999999999999641 1235789999
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
|+++ ++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++....
T Consensus 181 M~~~-----~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-----~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 181 MTKE-----QLITAPVGTTLSEAEKILQKYKIEKLPLVDN-----NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp CCCC-----CCCCEETTCCHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred cccC-----CCEEECCCCCHHHHHHHHHHcCCCEEEEEeC-----CCCEeeeccHHHHHHhhhc
Confidence 9851 5789999999999999999999999999998 8999999999999998765
No 66
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.37 E-value=1.4e-12 Score=140.55 Aligned_cols=132 Identities=14% Similarity=0.108 Sum_probs=108.2
Q ss_pred cccccc--cc-cceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 624 VFVSEV--MR-TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 624 ~~V~di--M~-~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
.+++++ |. +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+...... ....+.++.++|..
T Consensus 190 ~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~l~Giit~~dl~~~~~~~~--~~~~~~~v~~~~~~ 267 (330)
T 2v8q_E 190 KSLEELQIGTYANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEKT--YNNLDVSVTKALQH 267 (330)
T ss_dssp SBHHHHTCSBCSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEGGGTGGGGGSSC--CCCCSSBHHHHGGG
T ss_pred CCHHHhcccCcCCceEECCCCCHHHHHHHHHHcCCCeEEEECCCCcEEEEEEHHHHHHHHhccc--cccccCcHHHHHhc
Confidence 345554 55 78899999999999999999999999999999999999999999987653210 01124678999852
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 701 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 701 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
...+.+++.++++++++.+++++|.+++.+++||+|+ +|+++|+||++|+++++.++
T Consensus 268 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~-----~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 268 RSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE-----HDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp CCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSBEEEEEEHHHHHHHHHSS
T ss_pred cccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC-----CCcEEEEEeHHHHHHHHHhh
Confidence 1112227899999999999999999999999999997 79999999999999987654
No 67
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.32 E-value=4.1e-13 Score=152.31 Aligned_cols=120 Identities=18% Similarity=0.108 Sum_probs=93.8
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcc-cCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCS-ADG 702 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~-~~~ 702 (766)
.+++++|.++++++++++++.|+++.|.+++++.+||+|++++++|+||.+|++.. ...+.+++++|+ +
T Consensus 89 k~~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rDL~~~--------~~~~~~v~diM~p~-- 158 (496)
T 4fxs_A 89 KIFEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVRFV--------TDLTKSVAAVMTPK-- 158 (496)
T ss_dssp HHCCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHHHTTC--------CCTTSBGGGTSEEG--
T ss_pred cccccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHHHhhc--------ccCCCcHHHHhcCC--
Confidence 46788999999999999999999999999999999999999999999999998621 123578999999 4
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 703 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 703 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
.++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++..+.
T Consensus 159 ---~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-----~G~l~GiIT~~DIl~~~~~ 209 (496)
T 4fxs_A 159 ---ERLATVKEGATGAEVQEKMHKARVEKILVVND-----EFQLKGMITAKDFHKAESK 209 (496)
T ss_dssp ---GGCCEEECC----CGGGTCC---CCCEEEECT-----TSBCCEEECCC-----CCC
T ss_pred ---CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCCEEEeehHhHHHHhhcc
Confidence 13789999999999999999999999999998 8999999999999987643
No 68
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.31 E-value=1.8e-13 Score=155.96 Aligned_cols=124 Identities=16% Similarity=0.159 Sum_probs=5.7
Q ss_pred hccccccccc-cccceeEEeCCccHHHHHHHHHHcCCcEEEEecCC---CcEEEEEehhhHHHHHHHHhhhccccchhHh
Q 004241 620 LKRRVFVSEV-MRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDND---NILIGLLTLGDIEEFSKYAQAKTSRSKLLVS 695 (766)
Q Consensus 620 ~l~~~~V~di-M~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~---g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~ 695 (766)
.+..++..++ |+++++++++++|+.|+++.|.+++++.+||+|++ ++++|+||.+|+++. . ...+.+++
T Consensus 92 ~v~~V~~~e~gM~~~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~~~~g~lvGiVt~~Dl~~~-~------~~~~~~V~ 164 (503)
T 1me8_A 92 MVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQRDYPID-L------TQTETKVS 164 (503)
T ss_dssp HHHHHHTTTC----------------------------------------------------------------------
T ss_pred HHhhhhhcccCcccCCeEECCCCcHHHHHHHHHHcCceEEEEEECCCcCCeEEEEEEHHHHHhh-h------ccccCcHH
Confidence 3455556666 99999999999999999999999999999999987 899999999999864 1 12347899
Q ss_pred hhcccCCCCccC--CeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 696 EMCSADGETCCV--PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 696 dvm~~~~~~~~~--~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++|++ + +.++++++++.+++++|.+++.+.+||||+ +|+++|+||++||++.+..
T Consensus 165 diM~~------~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe-----~g~lvGiIT~~Dil~~~~~ 221 (503)
T 1me8_A 165 DMMTP------FSKLVTAHQDTKLSEANKIIWEKKLNALPIIDD-----DQHLRYIVFRKDYDRSQVC 221 (503)
T ss_dssp --------------------------------------------------------------------
T ss_pred HHhCC------CCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcC-----CCeEEEEEEecHHHHhhhc
Confidence 99997 5 899999999999999999999999999997 8999999999999987753
No 69
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.27 E-value=1.4e-11 Score=132.73 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=103.3
Q ss_pred cccccce--eEEeCCccHHHHHHHHHHcCCcEEEEecCCCc-----EEEEEehhhHHHHHHHHhhhccccchhHhhh---
Q 004241 628 EVMRTRY--VTVLMTTLLIEALTLMLAEKQSCAMIVDNDNI-----LIGLLTLGDIEEFSKYAQAKTSRSKLLVSEM--- 697 (766)
Q Consensus 628 diM~~~~--~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~-----lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dv--- 697 (766)
++|.+++ .++.+++++.++++.|.+++.+.+||+|+++. ++|++|.+|+.+.+..........+.+++++
T Consensus 111 ~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~v~~l~~~ 190 (334)
T 2qrd_G 111 KIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLTQYRILKFISMNCKETAMLRVPLNQMTIG 190 (334)
T ss_dssp HHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEEHHHHHHHHHHHCGGGGGCCCBGGGSSCS
T ss_pred hhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEeeHHHHHHHHHhhccchhhhhCcHHHhCCc
Confidence 4576666 89999999999999999999999999997654 9999999999988754221111224678884
Q ss_pred cccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 698 CSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 698 m~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
|.+ ++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||.+|+++...+
T Consensus 191 m~~------~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~dl~~~~~~ 243 (334)
T 2qrd_G 191 TWS------NLATASMETKVYDVIKMLAEKNISAVPIVNS-----EGTLLNVYESVDVMHLIQD 243 (334)
T ss_dssp BCS------SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEETHHHHHHHTT
T ss_pred ccC------CceEECCCCcHHHHHHHHHHcCCcEEEEEcC-----CCcEEEEEEHHHHHHHhhc
Confidence 777 7889999999999999999999999999997 7899999999999987643
No 70
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.26 E-value=1.2e-11 Score=140.88 Aligned_cols=120 Identities=22% Similarity=0.223 Sum_probs=107.5
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEec--CCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVD--NDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSAD 701 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd--~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~ 701 (766)
.+++++|.+++.++++++++.++++.|.+++++.+||+| ++++++|+||.+|+++.. ..+.+++++|+++
T Consensus 90 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~lvGivt~~Dl~~~~--------~~~~~v~~im~~~ 161 (491)
T 1zfj_A 90 KRSENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFIS--------DYNAPISEHMTSE 161 (491)
T ss_dssp HHHTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTTCBEEEEEEHHHHHHCS--------CSSSBTTTSCCCS
T ss_pred hhHHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCCCEEEEEEEHHHHhhhc--------cCCCcHHHHcCCC
Confidence 457899999999999999999999999999999999999 889999999999997531 1357899999851
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 702 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 702 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+.+
T Consensus 162 -----~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-----~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 162 -----HLVTAAVGTDLETAERILHEHRIEKLPLVDN-----SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp -----CCCCEETTCCHHHHHHHHHHTTCSEEEEECT-----TSBEEEEEEHHHHHHHHHC
T ss_pred -----CCEEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEEHHHHHHHHhc
Confidence 4678999999999999999999999999997 8999999999999998764
No 71
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.26 E-value=4.6e-13 Score=151.83 Aligned_cols=119 Identities=21% Similarity=0.092 Sum_probs=4.3
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcc-cC
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCS-AD 701 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~-~~ 701 (766)
..+++++|.++++++++++|+.|+++.|.+++++.+||+| +++++|+||.+|++... ..+.+++++|+ +
T Consensus 87 vk~~~~~m~~~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~g~lvGIVt~rDl~~~~--------~~~~~V~~vMtp~- 156 (490)
T 4avf_A 87 VKKHETAIVRDPVTVTPSTKIIELLQMAREYGFSGFPVVE-QGELVGIVTGRDLRVKP--------NAGDTVAAIMTPK- 156 (490)
T ss_dssp HHHCCC--------------------------------------------------------------------------
T ss_pred hcccccCcccCceEeCCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEhHHhhhcc--------ccCCcHHHHhccC-
Confidence 3578899999999999999999999999999999999999 89999999999996321 13478999999 3
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 702 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 702 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
.++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++..+
T Consensus 157 ----~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-----~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 157 ----DKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-----NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp -----------------------------------------------------------
T ss_pred ----CCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEehHHhhhhcc
Confidence 13789999999999999999999999999998 899999999999999764
No 72
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.23 E-value=9.1e-13 Score=146.10 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=1.5
Q ss_pred cccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecC---CCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCC
Q 004241 626 VSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADG 702 (766)
Q Consensus 626 V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~---~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~ 702 (766)
-+..|..+++++.|++|+.|++++|.+++++.+||+|+ +++++|+||.+|++.. ..+.+|+|+|++
T Consensus 140 ~e~g~i~dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~---------d~~~~V~evMT~-- 208 (556)
T 4af0_A 140 YENGFITDPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ---------DAETPIKSVMTT-- 208 (556)
T ss_dssp CCC-----------------------------------------------------------------------------
T ss_pred cccCccCCCeEcCCCCCHHHHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc---------ccceEhhhhccc--
Confidence 44568889999999999999999999999999999987 6899999999998642 124789999998
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 703 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 703 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
+.++++++.++++|.++|.+++.+.+||||+ +++++|+||++|+.+...
T Consensus 209 ----~lvt~~~~~~leeA~~iL~~~kieklpVVd~-----~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 209 ----EVVTGSSPITLEKANSLLRETKKGKLPIVDS-----NGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------------------------------------------------
T ss_pred ----ceEEecCCCCHHHHHHHHHHccccceeEEcc-----CCcEEEEEEechhhhhhh
Confidence 7899999999999999999999999999998 899999999999988653
No 73
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.21 E-value=1.1e-12 Score=149.55 Aligned_cols=122 Identities=21% Similarity=0.242 Sum_probs=7.7
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGE 703 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~ 703 (766)
.+++++|+++++++++++++.|+++.|.+++++.+||+|++++++|+||.+|+++.. ..+.+++++|++
T Consensus 95 ~~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~lvGivt~~Dl~~~~--------~~~~~v~~im~~--- 163 (494)
T 1vrd_A 95 KKTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVRFEK--------NLSKKIKDLMTP--- 163 (494)
T ss_dssp HTC-----------------------------------------------------------------------------
T ss_pred hhHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcCCCEEEEEEEHHHHHhhc--------CCCCcHHHHhCC---
Confidence 467899999999999999999999999999999999999999999999999998631 124689999984
Q ss_pred CccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhcc
Q 004241 704 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRFC 762 (766)
Q Consensus 704 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~~ 762 (766)
.+++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.....
T Consensus 164 -~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 164 -REKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-----DNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp ---------------------------------------------------CHHHHTCT
T ss_pred -CCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEEEHHHHHhhhccc
Confidence 114789999999999999999999999999997 89999999999999987543
No 74
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.07 E-value=1.3e-11 Score=140.22 Aligned_cols=115 Identities=23% Similarity=0.312 Sum_probs=2.7
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCCC
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGE 703 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~ 703 (766)
.+.++.|..++.++++++++.++++.|.+++++.+||+|+ ++++|+|+.+|++. . .+.+++++|++
T Consensus 93 ~~~~~~m~~~~~~v~~~~tv~ea~~~~~~~~~~~~pVvd~-~~lvGivt~~Dl~~---~-------~~~~v~~im~~--- 158 (486)
T 2cu0_A 93 KRAERLIVEDVITIAPDETVDFALFLMEKHGIDGLPVVED-EKVVGIITKKDIAA---R-------EGKLVKELMTK--- 158 (486)
T ss_dssp HTCC----------------------------------------------------------------------------
T ss_pred cchhhccccCceEECCCCCHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHhcc---C-------CCCCHHHHccC---
Confidence 3567789999999999999999999999999999999997 99999999999975 1 24679999997
Q ss_pred CccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 704 TCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 704 ~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++...
T Consensus 159 ---~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-----~g~lvGiiT~~Dil~~~~ 207 (486)
T 2cu0_A 159 ---EVITVPESIEVEEALKIMIENRIDRLPVVDE-----RGKLVGLITMSDLVARKK 207 (486)
T ss_dssp --------------------------------------------------------C
T ss_pred ---CCeEECCcCcHHHHHHHHHHcCCCEEEEEec-----CCeEEEEEEHHHHHHhhh
Confidence 7889999999999999999999999999997 899999999999999865
No 75
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.05 E-value=3.9e-12 Score=145.67 Aligned_cols=123 Identities=18% Similarity=0.214 Sum_probs=72.5
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecC---CCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDN---DNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~---~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
.+++++|.++++++++++++.|+++.|.+++++.+||+|+ +++++|+||.+|+.+... ...+.+++++|++
T Consensus 108 ~~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~------~~~~~~v~~vm~~ 181 (514)
T 1jcn_A 108 KNFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAE------KDHTTLLSEVMTP 181 (514)
T ss_dssp HTCCTTSCSSCCCCCC-----------------CEESCC--------CCEECTTTTC----------------------C
T ss_pred hhhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhh------ccCCCCHHHHhCC
Confidence 3688999999999999999999999999999999999998 589999999999976421 1134679999975
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 701 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 701 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
..++.++++++++.+++++|.+++.+.+||||+ +|+++|+||++|+++.+..
T Consensus 182 ----~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 182 ----RIELVVAPAGVTLKEANEILQRSKKGKLPIVND-----CDELVAIIARTDLKKNRDY 233 (514)
T ss_dssp ----CBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-----SSCCC----CCCCSSCCCC
T ss_pred ----CCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-----CCeEEEEEEHHHHHHHhhC
Confidence 114789999999999999999999999999997 8999999999999887643
No 76
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.73 E-value=1.5e-08 Score=83.21 Aligned_cols=65 Identities=14% Similarity=0.217 Sum_probs=53.9
Q ss_pred ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 633 ~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
++++++|++++.||++.|.+++.+++||+| +|+++|++|.+|+.+.+.... ....+.+++|+|++
T Consensus 1 k~vtv~p~~tv~ea~~~M~~~~i~~~~V~d-~~~lvGIvT~~Di~~~~~~~~--~~~~~~~V~~iMt~ 65 (70)
T 3ghd_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME-GDEILGVVTERDILDKVVAKG--KNPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHTTTTT--CCGGGCBGGGTCEE
T ss_pred CCEEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHhcC--CCcccCCHHHhcCC
Confidence 367899999999999999999999999998 589999999999986553311 11235789999998
No 77
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.73 E-value=1.4e-08 Score=102.30 Aligned_cols=102 Identities=17% Similarity=0.047 Sum_probs=56.4
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccCC
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADG 702 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~ 702 (766)
..+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.... .+.+.+.+-
T Consensus 71 ~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~--------~~~~~~~~l- 141 (213)
T 1vr9_A 71 DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL--------AMDVPGIRF- 141 (213)
T ss_dssp TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC--------C---------
T ss_pred CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh--------cCCCCcEEE-
Confidence 45799999999999999999999999999999999999998899999999999998765311 122333320
Q ss_pred CCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEec
Q 004241 703 ETCCVPCTATPNMNLLSALILMDRYGVNQVPVVME 737 (766)
Q Consensus 703 ~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde 737 (766)
.+.+.....++.++.+.|.+++.+.++|++.
T Consensus 142 ----~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 142 ----SVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp -----------------------------------
T ss_pred ----EEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 1112234456999999999999999999865
No 78
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.44 E-value=2.5e-07 Score=75.21 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=54.5
Q ss_pred ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 633 RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 633 ~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
++.++++++++.++++.|.+++++.+||+|+ ++++|+||.+|+.+.+..... ...+.+++++|++
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~~~--~~~~~~v~~im~~ 65 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAKGK--NPKEVKVEEIMTK 65 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTTTC--CGGGCBGGGTCEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHcCC--CcccCCHHHhcCC
Confidence 3578999999999999999999999999997 999999999999987643211 1235789999998
No 79
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.32 E-value=5.7e-07 Score=86.87 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=54.2
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 759 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~ 759 (766)
+.+|+|+|++ ++.++++++++.+|++.|.+++++++||+|+ +|+++|+||.+|+++..
T Consensus 17 ~~~V~diM~~------~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dll~~~ 74 (170)
T 4esy_A 17 QVPIRDILTS------PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-----NGHLVGIITESDFLRGS 74 (170)
T ss_dssp TSBGGGGCCS------CCCCEETTSBHHHHHHHHHHTTCSEEEEECT-----TSCEEEEEEGGGGGGGT
T ss_pred CCCHHHhcCC------CCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-----CccEEEEEEHHHHHHHH
Confidence 4789999998 8899999999999999999999999999997 89999999999998754
No 80
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.25 E-value=2.1e-06 Score=70.30 Aligned_cols=46 Identities=11% Similarity=0.213 Sum_probs=42.9
Q ss_pred CeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHh
Q 004241 708 PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 759 (766)
Q Consensus 708 ~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~ 759 (766)
+.++++|+++.+|.++|.+++++++||+| +|+++||+|..|+.+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d------~~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME------GDEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHH
Confidence 57899999999999999999999999998 68999999999998754
No 81
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.15 E-value=2e-06 Score=83.28 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=52.8
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCC-CcEEEEEeHHHHHHHhh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR-GQLVGLLDRESIILACR 760 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~-g~lvGIVt~~DIl~~~~ 760 (766)
+.+++++|++. +++.++++++++.+|++.|.+++.+.+||+|+ + ++++|+||.+|+++...
T Consensus 41 ~~~v~diM~~~----~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~ 102 (172)
T 3lhh_A 41 ERTISSLMVPR----SDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN-----NVDDMVGIISAKQLLSESI 102 (172)
T ss_dssp --CTTTTSEEG----GGCCCEETTSCHHHHHHHHHTCCCSEEEEESS-----STTSEEEEEEHHHHHHHHH
T ss_pred CCCHHHhCccH----HHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCeEEEEEEHHHHHHHHh
Confidence 47799999931 16789999999999999999999999999996 5 89999999999998765
No 82
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.13 E-value=3.2e-06 Score=76.28 Aligned_cols=58 Identities=19% Similarity=0.178 Sum_probs=54.7
Q ss_pred cccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 624 VFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 624 ~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
.+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 62 ~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 62 KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC
T ss_pred cCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhh
Confidence 4799999999999999999999999999999999999999999999999999998764
No 83
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.08 E-value=4.1e-06 Score=78.46 Aligned_cols=61 Identities=25% Similarity=0.323 Sum_probs=56.4
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.+
T Consensus 83 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 83 NGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp -CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred ccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHh
Confidence 3468999999999999999999999999999999999999999999999999999988754
No 84
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.08 E-value=5.6e-06 Score=75.91 Aligned_cols=60 Identities=22% Similarity=0.252 Sum_probs=56.3
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
..+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.+
T Consensus 66 ~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 66 ETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDD 125 (133)
T ss_dssp TCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred ccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999988754
No 85
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.07 E-value=6.7e-06 Score=77.10 Aligned_cols=58 Identities=22% Similarity=0.244 Sum_probs=54.7
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 87 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 144 (148)
T 3lv9_A 87 KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIV 144 (148)
T ss_dssp CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHH
T ss_pred CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 67899999 88999999999999999999999999999999999999999999998764
No 86
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.05 E-value=3.3e-06 Score=80.58 Aligned_cols=61 Identities=18% Similarity=0.207 Sum_probs=54.9
Q ss_pred hccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 620 LKRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 620 ~l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
.....+++++|.+++.++++++++.++++.|.+++ .+||+|++|+++|+||.+|+++.+..
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNA 142 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHH
Confidence 45667999999999999999999999999998765 59999999999999999999988754
No 87
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.04 E-value=8.5e-06 Score=74.61 Aligned_cols=59 Identities=20% Similarity=0.222 Sum_probs=52.9
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 67 ~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~ 125 (129)
T 3jtf_A 67 PALDIRSLVRP-AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIV 125 (129)
T ss_dssp TTSCGGGGCBC-CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCC-CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 35679999965 889999999999999999999999999999999999999999998764
No 88
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.04 E-value=7.6e-06 Score=81.79 Aligned_cols=61 Identities=15% Similarity=0.171 Sum_probs=57.2
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 114 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 114 PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVRE 174 (205)
T ss_dssp TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999999999999998865
No 89
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.04 E-value=5.1e-06 Score=80.31 Aligned_cols=61 Identities=30% Similarity=0.313 Sum_probs=57.3
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 96 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 96 YGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred ccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999998765
No 90
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.04 E-value=1e-05 Score=65.54 Aligned_cols=47 Identities=11% Similarity=0.195 Sum_probs=43.6
Q ss_pred CeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 708 PCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 708 ~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
+.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+++++.
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d------~~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME------GDEILGVVTERDILDKVV 48 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE------TTEEEEEEEHHHHHHHTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEE------CCEEEEEEEHHHHHHHHH
Confidence 57899999999999999999999999999 589999999999999853
No 91
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.04 E-value=5.9e-06 Score=75.41 Aligned_cols=58 Identities=24% Similarity=0.285 Sum_probs=53.1
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l 680 (766)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 67 ~~~~v~~~m~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT-AVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC-CCEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHH
Confidence 45689999965 78999999999999999999999999999999999999999998765
No 92
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.03 E-value=8.7e-06 Score=76.92 Aligned_cols=59 Identities=20% Similarity=0.183 Sum_probs=55.4
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 85 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhc
Confidence 67899999 899999999999999999999999999999999999999999999987753
No 93
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.02 E-value=6.5e-06 Score=75.47 Aligned_cols=58 Identities=31% Similarity=0.393 Sum_probs=53.5
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
..+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 71 ~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 71 QKQLGAVMR-PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp TSBHHHHSE-ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred cCCHHHHhc-CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHc
Confidence 568999995 5889999999999999999999999999999999999999999998764
No 94
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.02 E-value=6.5e-06 Score=75.63 Aligned_cols=58 Identities=22% Similarity=0.190 Sum_probs=53.2
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
..+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 69 ~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (130)
T 3hf7_A 69 KEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIV 126 (130)
T ss_dssp HHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHH
T ss_pred hhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHh
Confidence 35688999 67889999999999999999999999999999999999999999998764
No 95
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.02 E-value=1.2e-05 Score=75.51 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=55.1
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+..
T Consensus 84 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~ 143 (150)
T 3lqn_A 84 LEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNK 143 (150)
T ss_dssp GGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHH
Confidence 35678999999999999999999999999999886 9999999999999999999988765
No 96
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.00 E-value=7.2e-06 Score=83.98 Aligned_cols=59 Identities=22% Similarity=0.322 Sum_probs=55.1
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
+.+++|+|++ ++.++++++++.+|+++|.+++.+++||+|+ +|+++|+||..|+.+.+.
T Consensus 6 ~~~v~~im~~------~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-----~~~l~Giit~~di~~~~~ 64 (245)
T 3l2b_A 6 KLKVEDLEMD------KIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-----NNHLLGMLSTSNITATYM 64 (245)
T ss_dssp CCBGGGSCCB------CCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-----TCBEEEEEEHHHHHHHHH
T ss_pred cCcHHHhcCC------CCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHH
Confidence 4679999998 7899999999999999999999999999997 799999999999998874
No 97
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.99 E-value=7e-06 Score=74.96 Aligned_cols=60 Identities=12% Similarity=0.057 Sum_probs=54.5
Q ss_pred cchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 690 SKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 690 ~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
.+.+++++|.+ ++.++++++++.+|.+.|.+++.+++||+| +|+++|+||.+|+.+...+
T Consensus 3 ~s~~v~~~m~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd------~~~~~Givt~~dl~~~~~~ 62 (128)
T 3gby_A 3 ASVTFSYLAET------DYPVFTLGGSTADAARRLAASGCACAPVLD------GERYLGMVHLSRLLEGRKG 62 (128)
T ss_dssp TTCBGGGGCBC------CSCCEETTSBHHHHHHHHHHHTCSEEEEEE------TTEEEEEEEHHHHHTTCSS
T ss_pred cceEHHHhhcC------CcceECCCCCHHHHHHHHHHCCCcEEEEEE------CCEEEEEEEHHHHHHHHhh
Confidence 34789999998 789999999999999999999999999999 5899999999999987643
No 98
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.99 E-value=9.3e-06 Score=75.14 Aligned_cols=59 Identities=22% Similarity=0.186 Sum_probs=53.6
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 68 ~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 68 DSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-
T ss_pred CCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHh
Confidence 45689999976 899999999999999999999999999999999999999999987654
No 99
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.98 E-value=8.3e-06 Score=75.04 Aligned_cols=60 Identities=22% Similarity=0.323 Sum_probs=55.6
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+.+
T Consensus 72 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 72 KDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC
T ss_pred ccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999 7999999999999987653
No 100
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.97 E-value=7.1e-06 Score=77.82 Aligned_cols=60 Identities=30% Similarity=0.178 Sum_probs=55.7
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.+ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.+
T Consensus 94 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 94 IAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWK 153 (157)
T ss_dssp SSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred cCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 45789999999 9999999999999999999999999999989999999999999987754
No 101
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.97 E-value=9.2e-06 Score=73.44 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=55.0
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+.
T Consensus 63 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 63 AEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKM 121 (125)
T ss_dssp TTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC
T ss_pred cccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHH
Confidence 467899999999999999999999999999999999999998 99999999999998764
No 102
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.96 E-value=8.8e-06 Score=75.03 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=54.8
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcC-----CcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEK-----QSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~-----~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
...+++++|.+++.++++++++.++++.|.+++ .+.+||+|++|+++|+||.+|+.+.+.
T Consensus 71 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 135 (138)
T 2p9m_A 71 LETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTIS 135 (138)
T ss_dssp SSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred CCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHH
Confidence 456899999999999999999999999999999 999999999999999999999998764
No 103
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.93 E-value=1.2e-05 Score=74.51 Aligned_cols=58 Identities=12% Similarity=0.170 Sum_probs=53.3
Q ss_pred hhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCC--cEEEEEeHHHHHHHhh
Q 004241 692 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRG--QLVGLLDRESIILACR 760 (766)
Q Consensus 692 ~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g--~lvGIVt~~DIl~~~~ 760 (766)
.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+ ++ +++|+||.+|+++.+.
T Consensus 5 ~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~Givt~~dl~~~~~ 64 (141)
T 2rih_A 5 IRTSELLKR------PPVSLPETATIREVATELAKNRVGLAVLTAR-----DNPKRPVAVVSERDILRAVA 64 (141)
T ss_dssp CBGGGGCCS------CCEEEETTCBHHHHHHHHHHHTCSEEEEEET-----TEEEEEEEEEEHHHHHHHHH
T ss_pred eEHHHHhcC------CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcceeEEEEEHHHHHHHHh
Confidence 578999998 7899999999999999999999999999996 67 9999999999998753
No 104
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.93 E-value=8.3e-06 Score=84.06 Aligned_cols=62 Identities=13% Similarity=0.151 Sum_probs=54.5
Q ss_pred cchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 690 SKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 690 ~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
.+.+|+|+|++ ++.++.+++++.+|.++|.+++++.+||||++ ++++++|+||++||++++.
T Consensus 11 ~~~~v~diMt~------~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~---~~~~LvGiIt~~dl~~~l~ 72 (250)
T 2d4z_A 11 YNIQVGDIMVR------DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTP---DTNTLLGSIDRTEVEGLLQ 72 (250)
T ss_dssp SSCBTTSSSBS------SCCCEETTCBHHHHHHHHHHCCCSEEEEESCT---TTCBEEEEEEHHHHHHHHH
T ss_pred CCCChHHhcCC------CCeEECCCCCHHHHHHHHHhcCCCEEEEEecC---CCCeEEEEEEHHHHHHHHH
Confidence 34789999998 89999999999999999999999999999961 1368999999999998653
No 105
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.92 E-value=1.5e-05 Score=73.43 Aligned_cols=56 Identities=21% Similarity=0.332 Sum_probs=52.1
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHH
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 757 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~ 757 (766)
..+++++|.+ ++.++++++++.+|.+.|.+++.+.+||+|+ +|+++|+||.+|+++
T Consensus 6 ~~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~ 61 (138)
T 2yzi_A 6 KAPIKVYMTK------KLLGVKPSTSVQEASRLMMEFDVGSLVVIND-----DGNVVGFFTKSDIIR 61 (138)
T ss_dssp TSBGGGTCBC------CCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHH
T ss_pred hhhHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHH
Confidence 4679999988 7899999999999999999999999999997 789999999999984
No 106
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.92 E-value=1.2e-05 Score=74.63 Aligned_cols=60 Identities=22% Similarity=0.249 Sum_probs=53.5
Q ss_pred cccccccccc------ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 623 RVFVSEVMRT------RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 623 ~~~V~diM~~------~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 76 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 76 SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp CSBHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CccHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 5689999986 68999999999999999999999999999999999999999999987753
No 107
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=97.92 E-value=1.1e-05 Score=76.76 Aligned_cols=61 Identities=10% Similarity=0.166 Sum_probs=56.8
Q ss_pred ccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCC---cEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDN---ILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g---~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++| +++|+||.+|+.+.+.+
T Consensus 79 ~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 79 TSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred cCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 45689999998 899999999999999999999999999999888 99999999999988765
No 108
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.92 E-value=1.6e-05 Score=74.94 Aligned_cols=58 Identities=16% Similarity=0.318 Sum_probs=53.4
Q ss_pred ccccccccc------cceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHH
Q 004241 623 RVFVSEVMR------TRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (766)
Q Consensus 623 ~~~V~diM~------~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l 680 (766)
..++.++|. +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHH
Confidence 457888886 7899999999999999999999999999999999999999999998765
No 109
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.90 E-value=1.3e-05 Score=76.31 Aligned_cols=58 Identities=24% Similarity=0.387 Sum_probs=53.4
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILAC 759 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~ 759 (766)
..+++++|.+ ++.++++++++.+|++.|.+++.+.+||+|+ +|+++|+||.+|+++..
T Consensus 4 ~~~v~dim~~------~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~ 61 (160)
T 2o16_A 4 MIKVEDMMTR------HPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-----NKKLLGIVSQRDLLAAQ 61 (160)
T ss_dssp CCBGGGTSEE------SCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHH
T ss_pred cCcHHHHhcC------CCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHH
Confidence 3678999998 7889999999999999999999999999997 78999999999998865
No 110
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.88 E-value=2.6e-05 Score=73.62 Aligned_cols=60 Identities=17% Similarity=0.249 Sum_probs=54.9
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
....+++++|.+++.++++++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+..
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~ 139 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNK 139 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHH
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 34678999999999999999999999999999876 9999999999999999999988764
No 111
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.85 E-value=2.3e-05 Score=73.50 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=53.7
Q ss_pred hhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhhc
Q 004241 692 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACRF 761 (766)
Q Consensus 692 ~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~~ 761 (766)
.+++|+|.+. .++.++++++++.++++.|.+++.+++||+|+ +|+++|+||.+|+.+...+
T Consensus 28 ~~v~dim~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 28 LRVNDIMHTG----DEIPHVGLQATLRDALLEITRKNLGMTAICDD-----DMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp SBGGGTSBCG----GGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-----TCBEEEEEEHHHHHHHHCS
T ss_pred cCHHHHhcCC----CCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCcEEEEecHHHHHHHHhc
Confidence 5799999851 14789999999999999999999999999997 7999999999999987643
No 112
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.85 E-value=1.5e-05 Score=75.27 Aligned_cols=61 Identities=18% Similarity=0.146 Sum_probs=53.3
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
..+++|+|++ .+++.++++++++.+|.+.|.+++.+++||+|+ +|+++|+||.+|+.+...
T Consensus 14 ~~~v~dim~p----~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 14 LGQEETFLTP----AKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-----EKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp HTTGGGGEEE----GGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------CBEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCc----ccCceEECCCCCHHHHHHHHHHCCCceEeEECC-----CCEEEEEEcHHHHHHHHH
Confidence 3678999994 116889999999999999999999999999997 799999999999998764
No 113
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.84 E-value=1.8e-05 Score=75.77 Aligned_cols=61 Identities=16% Similarity=0.186 Sum_probs=56.2
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
....+++++|.+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+.+.+..
T Consensus 90 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~ 150 (165)
T 3fhm_A 90 SLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIG 150 (165)
T ss_dssp GGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTC
T ss_pred cccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 4467899999999999999999999999999999999999998 999999999999987643
No 114
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.84 E-value=1.4e-05 Score=75.53 Aligned_cols=60 Identities=23% Similarity=0.305 Sum_probs=56.3
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+..
T Consensus 76 ~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 76 KATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHT
T ss_pred cccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999 7999999999999998765
No 115
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.83 E-value=2.6e-05 Score=75.66 Aligned_cols=61 Identities=11% Similarity=0.119 Sum_probs=56.4
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
....+++++|.+++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+.+.+..
T Consensus 105 ~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~ 165 (185)
T 2j9l_A 105 PPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQ 165 (185)
T ss_dssp CCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHH
T ss_pred ccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHH
Confidence 345689999999999999999999999999999999999999 8999999999999988765
No 116
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.83 E-value=1.5e-05 Score=72.92 Aligned_cols=55 Identities=16% Similarity=0.272 Sum_probs=51.3
Q ss_pred hhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHH
Q 004241 692 LLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIIL 757 (766)
Q Consensus 692 ~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~ 757 (766)
.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||.+|+++
T Consensus 8 ~~v~~im~~------~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNA------GVTCVGEHETLTAAAQYMREHDIGALPICGD-----DDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEE------TCCCEETTSBHHHHHHHHHHHTCSEEEEECG-----GGBEEEEEEHHHHHH
T ss_pred cCHHHHhcC------CceEeCCCCCHHHHHHHHHHhCCCeEEEECC-----CCeEEEEEeHHHHHH
Confidence 578999998 7889999999999999999999999999987 789999999999984
No 117
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.82 E-value=1.6e-05 Score=77.60 Aligned_cols=60 Identities=18% Similarity=0.252 Sum_probs=55.5
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
...+++++|.+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+.
T Consensus 73 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 73 DEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred ccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 456899999999999999999999999999999999999999899999999999987653
No 118
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.79 E-value=2.9e-05 Score=73.67 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=50.9
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIE 677 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~ 677 (766)
...+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.
T Consensus 101 ~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 45689999976 88999999999999999999999999999999999999999974
No 119
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.77 E-value=3.4e-05 Score=74.80 Aligned_cols=80 Identities=6% Similarity=0.016 Sum_probs=59.8
Q ss_pred EEEEehhhHHHHHHHHhhhccccchhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCC-CcE
Q 004241 668 IGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQR-GQL 746 (766)
Q Consensus 668 vGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~-g~l 746 (766)
-|.++..+-...... . ...+.+|+++|++. +++.++++++++.+++++|.+++.+.+||+|+ + +++
T Consensus 16 ~g~l~~~e~~~i~~~-l---~l~~~~v~diM~~~----~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-----~~~~l 82 (173)
T 3ocm_A 16 VPAFGVEERNMVSGV-L---TLAERSIRSIMTPR----TDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG-----SLDEV 82 (173)
T ss_dssp --CCCHHHHHHHHHH-H---HHTTSCSTTTSEEG----GGCCCEETTSCHHHHHHHHHHSSCSEEEEESS-----STTSE
T ss_pred cCCcCHHHHHHHHHH-h---ccCCCCHHHhCCcH----HHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCCE
Confidence 367776553322111 1 12347899999741 15789999999999999999999999999986 5 899
Q ss_pred EEEEeHHHHHHHhh
Q 004241 747 VGLLDRESIILACR 760 (766)
Q Consensus 747 vGIVt~~DIl~~~~ 760 (766)
+|+||.+|+++...
T Consensus 83 vGivt~~Dl~~~~~ 96 (173)
T 3ocm_A 83 VGIGRAKDLVADLI 96 (173)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred EEEEEHHHHHHHHh
Confidence 99999999998753
No 120
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.76 E-value=3.3e-05 Score=73.32 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=54.0
Q ss_pred chhHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
..+++|+|.+ ++.++++++++.+|++.|.+++.+++||+|++ ++|+++|+||.+|+.+...
T Consensus 12 ~~~v~dim~~------~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~---~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 12 HVRVEHFMNH------SITTLAKDTPLEEVVKVVTSTDVTEYPLVEST---ESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp SCBHHHHCBC------CCCCEETTCBHHHHHHHHHTCCCSEEEEESCT---TTCBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHcCC------CCeEECCCCcHHHHHHHHHhCCCCceeEEecC---CCCEEEEEEEHHHHHHHHH
Confidence 4789999998 78899999999999999999999999999841 1589999999999988763
No 121
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.75 E-value=2.7e-05 Score=73.85 Aligned_cols=60 Identities=12% Similarity=0.210 Sum_probs=54.5
Q ss_pred ccccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 621 KRRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 621 l~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
....+++++|.+++.++.+++++.++++.|.+++. +||+|++|+++|+||.+|+.+.+..
T Consensus 83 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~ 142 (159)
T 1yav_A 83 LDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNK 142 (159)
T ss_dssp TTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 34678999999999999999999999999998875 9999999999999999999988754
No 122
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.71 E-value=7.6e-06 Score=93.04 Aligned_cols=100 Identities=16% Similarity=0.093 Sum_probs=19.1
Q ss_pred cccccccccccc--eeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcc
Q 004241 622 RRVFVSEVMRTR--YVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCS 699 (766)
Q Consensus 622 ~~~~V~diM~~~--~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~ 699 (766)
...+++++|+++ ++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..... .......++.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~~~~~----~~d~~~~l~v 234 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDRSQVCHNE----LVDSQKRYLV 234 (503)
T ss_dssp ---------------------------------------------------------------CCC----CBCTTSCBCC
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEecHHHHhhhcccc----hhcccccccc
Confidence 356899999987 9999999999999999999999999999999999999999999987653111 0011111211
Q ss_pred cCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEE
Q 004241 700 ADGETCCVPCTATPNMNLLSALILMDRYGVNQVPV 734 (766)
Q Consensus 700 ~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpV 734 (766)
...+.. .+..+..+.+.+.+.+.+.|
T Consensus 235 --------~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 235 --------GAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp --------EEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred --------ccccCc-hhHHHHHHHHHhhhccceEE
Confidence 124455 56666678888889986554
No 123
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.70 E-value=9.1e-05 Score=84.15 Aligned_cols=103 Identities=20% Similarity=0.249 Sum_probs=75.9
Q ss_pred ccccccccccc-ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhccc
Q 004241 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSA 700 (766)
Q Consensus 622 ~~~~V~diM~~-~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~ 700 (766)
.+.+++++|++ +++++++++++.|+++.|.+++.+.+||+|++|+++|+||.+|+++.+... ..+.|.+.+
T Consensus 173 ~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p--------~a~~D~~~r 244 (511)
T 3usb_A 173 YSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFP--------NSAKDKQGR 244 (511)
T ss_dssp SSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCT--------TCCBCTTSC
T ss_pred CCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcc--------cchhhhccc
Confidence 45689999998 999999999999999999999999999999999999999999999887531 122233332
Q ss_pred CCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEe
Q 004241 701 DGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVM 736 (766)
Q Consensus 701 ~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVd 736 (766)
. .....+....+..+..+.+.+.+.+.+.|-.
T Consensus 245 l----~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 245 L----LVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp B----CCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred e----eeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 0 0112333344445556667778888665543
No 124
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.69 E-value=3.8e-05 Score=80.32 Aligned_cols=61 Identities=26% Similarity=0.312 Sum_probs=55.7
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 197 ~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999987653
No 125
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.69 E-value=4.5e-05 Score=80.24 Aligned_cols=61 Identities=15% Similarity=0.254 Sum_probs=57.0
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
...+++++|.++++++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 199 ~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 3568999999999999999999999999999999999999999999999999999988765
No 126
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.59 E-value=8.4e-05 Score=83.78 Aligned_cols=61 Identities=26% Similarity=0.312 Sum_probs=57.3
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
.+.+++++|++++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+.+.+..
T Consensus 217 ~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCCCEEEEEEehHhhHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999988754
No 127
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.37 E-value=0.00013 Score=83.46 Aligned_cols=59 Identities=25% Similarity=0.425 Sum_probs=54.2
Q ss_pred chhHhhhcccCCCCccCCeEeCCC-CCHHHHHHHHHHcCCCEEEEEe-ccCCCCCCcEEEEEeHHHHHHHhh
Q 004241 691 KLLVSEMCSADGETCCVPCTATPN-MNLLSALILMDRYGVNQVPVVM-EHIPGQRGQLVGLLDRESIILACR 760 (766)
Q Consensus 691 ~~~V~dvm~~~~~~~~~~~~V~~d-~sL~eal~~m~~~~~~~lpVVd-e~~~~~~g~lvGIVt~~DIl~~~~ 760 (766)
+.+|+|+|++ ++.+++++ +++.+++++|.+++++++||+| + +++++|+||.+||++.+.
T Consensus 383 ~~~V~diM~~------~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~-----~g~lvGiVt~~Dll~~l~ 443 (527)
T 3pc3_A 383 SLAIAELELP------APPVILKSDATVGEAIALMKKHRVDQLPVVDQD-----DGSVLGVVGQETLITQIV 443 (527)
T ss_dssp TSBGGGGCCC------CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT-----TCCEEEEEEHHHHHHHHH
T ss_pred CCcHHHhCcC------CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC-----CCEEEEEEEHHHHHHHHH
Confidence 4779999998 78999999 9999999999999999999999 6 789999999999997754
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.01 E-value=0.00088 Score=75.86 Aligned_cols=61 Identities=30% Similarity=0.341 Sum_probs=56.7
Q ss_pred ccccccccccc-ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHH
Q 004241 622 RRVFVSEVMRT-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKY 682 (766)
Q Consensus 622 ~~~~V~diM~~-~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~ 682 (766)
.+.+++++|++ ++.++++++++.++++.|.+++.+.+||+|++++++|++|.+|+.+.+..
T Consensus 150 ~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 150 YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEEEHHHHHHHHHC
T ss_pred CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEEEHHHHHHHHhc
Confidence 45689999998 89999999999999999999999999999999999999999999988763
No 129
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.99 E-value=0.00017 Score=81.58 Aligned_cols=101 Identities=27% Similarity=0.363 Sum_probs=18.1
Q ss_pred cccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHHHHhhhccccchhHhhhcccC
Q 004241 622 RRVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSKYAQAKTSRSKLLVSEMCSAD 701 (766)
Q Consensus 622 ~~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~~~~~~~~~~~~~V~dvm~~~ 701 (766)
...+++++|++++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+..... ....+.+..
T Consensus 148 ~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~~Dil~~~~~~--------~~~~~~~g~- 218 (486)
T 2cu0_A 148 EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVARKKYK--------NAVRDENGE- 218 (486)
T ss_dssp -----------------------------------------------------------CCT--------TCCBCTTSC-
T ss_pred CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEHHHHHHhhhcc--------ccccccCCc-
Confidence 35689999999999999999999999999999999999999999999999999999875320 011111111
Q ss_pred CCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEec
Q 004241 702 GETCCVPCTATPNMNLLSALILMDRYGVNQVPVVME 737 (766)
Q Consensus 702 ~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde 737 (766)
.+ -...+..++ .+....+.+.+.+.+ |+|.
T Consensus 219 -~~--v~~~~~~~~--~~~a~~l~~~gvd~l-vvdt 248 (486)
T 2cu0_A 219 -LL--VAAAVSPFD--IKRAIELDKAGVDVI-VVDT 248 (486)
T ss_dssp -BC--CEEEECTTC--HHHHHHHHHTTCSEE-EEEC
T ss_pred -ee--ecceechhh--HHHHHHHHHhcCCce-EEEe
Confidence 00 012234433 555677888899865 6663
No 130
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.85 E-value=0.00017 Score=80.41 Aligned_cols=59 Identities=25% Similarity=0.242 Sum_probs=0.0
Q ss_pred ccccccccccceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 623 RVFVSEVMRTRYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 623 ~~~V~diM~~~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
..+|+|+|++++++++++.+++||.++|.+++...+||||++++++|+||.+|+.+...
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp -----------------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 46899999999999999999999999999999999999999999999999999987643
No 131
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.79 E-value=0.00049 Score=78.00 Aligned_cols=59 Identities=20% Similarity=0.292 Sum_probs=4.6
Q ss_pred cccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 623 RVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 623 ~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
..+++++|++ ++.++++++++.++++.|.+++.+.+||+|++++++|+||.+|+.+.+.
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp -------------------------------------------------------CHHHHT
T ss_pred CCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 4689999998 9999999999999999999999999999999999999999999998764
No 132
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.77 E-value=0.00054 Score=77.42 Aligned_cols=60 Identities=27% Similarity=0.294 Sum_probs=0.0
Q ss_pred cccccccccc-c-ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHHH
Q 004241 622 RRVFVSEVMR-T-RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFSK 681 (766)
Q Consensus 622 ~~~~V~diM~-~-~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l~ 681 (766)
...+++++|+ + +++++++++++.|+++.|.+++.+.+||+|++|+++|+||.+|+++...
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp --------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEehHHhhhhcc
Confidence 4568999999 4 6999999999999999999999999999999999999999999998754
No 133
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.73 E-value=0.0015 Score=73.88 Aligned_cols=53 Identities=23% Similarity=0.396 Sum_probs=47.1
Q ss_pred hHhhhcccCCCCccCCeEeCCCCCHHHHHHHHHHcCCCEEEEEeccCCCCCCcEEEEEeHHHHH
Q 004241 693 LVSEMCSADGETCCVPCTATPNMNLLSALILMDRYGVNQVPVVMEHIPGQRGQLVGLLDRESII 756 (766)
Q Consensus 693 ~V~dvm~~~~~~~~~~~~V~~d~sL~eal~~m~~~~~~~lpVVde~~~~~~g~lvGIVt~~DIl 756 (766)
.++++|.+ ++.++++++++.++.++|.+++.+.+||+|+ +++++|+||.+|+.
T Consensus 90 ~~~~~m~~------d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-----~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 90 IFEAGVVT------HPVTVRPEQTIADVMELTHYHGFAGFPVVTE-----NNELVGIITGRDVR 142 (496)
T ss_dssp HCCC--CB------CCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-----SSBEEEEEEHHHHT
T ss_pred cccccccc------CceEECCCCCHHHHHHHHHHcCCcEEEEEcc-----CCEEEEEEEHHHHh
Confidence 45677877 7899999999999999999999999999997 78999999999996
No 134
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.08 E-value=0.00054 Score=78.04 Aligned_cols=59 Identities=22% Similarity=0.275 Sum_probs=42.5
Q ss_pred ccccccccccc--ceeEEeCCccHHHHHHHHHHcCCcEEEEecCCCcEEEEEehhhHHHHH
Q 004241 622 RRVFVSEVMRT--RYVTVLMTTLLIEALTLMLAEKQSCAMIVDNDNILIGLLTLGDIEEFS 680 (766)
Q Consensus 622 ~~~~V~diM~~--~~~~V~~~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt~~dL~~~l 680 (766)
...+++++|++ +++++++++++.++++.|.+++.+.+||+|++|+++|+||++|+.+.+
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 45689999998 999999999999999999999999999999999999999999998654
No 135
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=24.41 E-value=1.2e+02 Score=23.10 Aligned_cols=33 Identities=15% Similarity=-0.038 Sum_probs=25.0
Q ss_pred CccHHHHHHHHHHcCCcEEEEecCCCcEEEEEe
Q 004241 640 TTLLIEALTLMLAEKQSCAMIVDNDNILIGLLT 672 (766)
Q Consensus 640 ~~tl~eal~~m~~~~~~~~pVvd~~g~lvGiVt 672 (766)
-+|++||+..|...+++.+.-.|.+..-+-+|-
T Consensus 12 pmsveEAv~qmel~gh~F~vF~n~~t~~~nVvY 44 (57)
T 3k2t_A 12 PMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVY 44 (57)
T ss_dssp CBCHHHHHHHHHHHTCSEEEEEBSSSCCEEEEE
T ss_pred CCCHHHHHHHHHhCCCcEEEEEcCCCCCEEEEE
Confidence 489999999999999998888886533334443
Done!