Query 004242
Match_columns 766
No_of_seqs 447 out of 3150
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:50:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 3E-126 1E-130 1105.2 55.5 632 117-766 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 2E-113 8E-118 1000.2 52.6 612 117-765 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 3.2E-82 1.1E-86 766.8 45.6 532 129-765 6-605 (926)
4 3afg_A Subtilisin-like serine 100.0 2.2E-61 7.4E-66 552.1 31.6 340 72-620 59-418 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.5E-58 5.3E-63 512.2 22.0 322 71-620 22-392 (395)
6 3t41_A Epidermin leader peptid 100.0 7.4E-57 2.5E-61 511.3 29.7 334 72-621 65-466 (471)
7 2p4e_P Proprotein convertase s 100.0 1E-57 3.5E-62 523.8 5.8 333 25-583 76-422 (692)
8 1y9z_A Alkaline serine proteas 100.0 3.7E-55 1.3E-59 491.9 25.7 381 124-641 6-437 (441)
9 1r6v_A Subtilisin-like serine 100.0 3.2E-54 1.1E-58 498.3 27.4 373 22-631 29-450 (671)
10 4h6x_A Thiazoline oxidase/subt 100.0 1.9E-53 6.4E-58 464.8 8.9 306 130-619 21-337 (357)
11 1dbi_A AK.1 serine protease; h 100.0 2E-51 6.8E-56 433.8 23.9 265 123-619 12-279 (280)
12 1r0r_E Subtilisin carlsberg; h 100.0 1.1E-51 3.8E-56 434.6 20.7 262 124-619 6-274 (274)
13 1gci_A Subtilisin; hydrolase, 100.0 1.6E-51 5.5E-56 431.7 21.7 261 124-619 6-269 (269)
14 1to2_E Subtilisin BPN'; serine 100.0 2.4E-51 8.2E-56 433.4 21.3 264 124-620 6-276 (281)
15 2x8j_A Intracellular subtilisi 100.0 3.2E-51 1.1E-55 441.6 19.2 270 123-619 22-310 (327)
16 1thm_A Thermitase; hydrolase(s 100.0 1.6E-50 5.6E-55 426.8 22.1 263 124-619 13-278 (279)
17 3zxy_A Subtilisin-like protein 100.0 7.4E-51 2.5E-55 430.8 17.0 263 137-619 4-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 2.4E-49 8.1E-54 425.2 25.8 289 123-614 7-309 (310)
19 4h6w_A N-terminal cyanobactin 100.0 2E-50 6.7E-55 433.0 16.3 270 130-619 11-287 (306)
20 2z30_A TK-subtilisin; thermoco 100.0 3.7E-50 1.3E-54 432.7 17.7 270 123-619 9-316 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 1.1E-49 3.7E-54 434.5 17.2 271 129-620 32-329 (347)
22 3lpc_A APRB2; protease, subtil 100.0 2.3E-49 7.9E-54 430.9 18.7 301 129-620 21-337 (340)
23 3lxu_X Tripeptidyl-peptidase 2 100.0 4.5E-48 1.5E-52 464.3 25.8 356 216-764 267-651 (1354)
24 1sh7_A Extracellular subtilisi 100.0 1.2E-47 4.3E-52 405.1 23.9 235 130-584 19-257 (284)
25 1wmd_A Protease; alpha-beta hy 100.0 4.2E-48 1.4E-52 434.2 21.4 291 130-621 11-319 (434)
26 2b6n_A Proteinase K; S binding 100.0 1.2E-46 4.2E-51 397.0 24.8 236 130-583 21-260 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 6.3E-47 2.1E-51 399.3 22.2 235 130-584 21-259 (276)
28 2oxa_A Extracellular serine pr 100.0 1.9E-47 6.6E-52 445.0 19.8 296 130-624 60-429 (600)
29 2pwa_A Proteinase K; structure 100.0 2.6E-47 8.9E-52 401.7 18.2 227 132-583 24-259 (279)
30 1p8j_A Furin precursor; prohor 100.0 1.3E-46 4.5E-51 425.7 20.0 292 129-622 27-332 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 7.3E-46 2.5E-50 422.3 20.8 283 129-621 43-343 (503)
32 2qtw_B Proprotein convertase s 100.0 9.9E-46 3.4E-50 414.2 20.2 281 132-619 18-313 (546)
33 3f7m_A Alkaline serine proteas 100.0 3.7E-45 1.3E-49 386.3 19.0 229 131-584 24-261 (279)
34 3hjr_A Extracellular serine pr 100.0 1.2E-43 4.1E-48 414.6 24.3 295 129-621 59-426 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 1.6E-25 5.5E-30 255.4 11.1 96 247-346 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 3.1E-22 1.1E-26 217.7 11.0 99 248-346 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 1.2E-09 4.1E-14 123.7 12.1 97 249-346 263-374 (544)
38 2w2n_P Proprotein convertase s 99.0 3.1E-10 1.1E-14 101.6 5.1 79 22-115 35-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.8 5.3E-09 1.8E-13 87.6 7.5 74 22-119 6-79 (80)
40 2qtw_A Proprotein convertase s 98.7 6.7E-09 2.3E-13 94.1 5.2 78 23-115 46-123 (124)
41 3icu_A E3 ubiquitin-protein li 98.7 1.1E-07 3.9E-12 92.3 12.0 94 388-481 82-187 (194)
42 1v5i_B POIA1, IA-1=serine prot 98.4 1.9E-07 6.4E-12 77.0 5.0 70 25-115 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.3 0.00024 8.1E-09 56.4 5.3 43 71-114 21-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.7 0.013 4.5E-07 64.5 13.7 88 373-468 92-182 (421)
45 3iib_A Peptidase M28; YP_92679 95.8 0.034 1.2E-06 61.5 11.0 101 373-480 105-226 (444)
46 3kas_A Transferrin receptor pr 95.2 0.027 9.4E-07 64.9 7.6 90 373-468 107-230 (640)
47 3fed_A Glutamate carboxypeptid 94.7 0.022 7.7E-07 66.3 5.3 71 399-469 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 93.0 0.34 1.2E-05 43.1 8.6 72 682-760 41-113 (122)
49 3lxu_X Tripeptidyl-peptidase 2 88.3 0.21 7.2E-06 61.4 3.2 25 135-159 31-55 (1354)
50 2r39_A FIXG-related protein; s 84.3 6.5 0.00022 34.4 10.1 55 682-738 31-85 (118)
51 1y9z_A Alkaline serine proteas 82.4 0.87 3E-05 50.1 4.2 31 486-524 181-211 (441)
52 2e6j_A Hydin protein; PAPD, st 76.4 2.5 8.5E-05 36.5 4.5 66 683-751 27-93 (112)
53 3qbt_B Inositol polyphosphate 68.6 22 0.00075 32.1 9.0 82 683-765 44-137 (140)
54 2qsv_A Uncharacterized protein 66.7 25 0.00086 34.2 9.8 66 682-751 19-85 (220)
55 2kq1_A BH0266 protein; solutio 58.9 3.3 0.00011 36.5 1.4 56 683-738 54-111 (119)
56 3zyz_A Beta-D-glucoside glucoh 58.7 15 0.00053 42.6 7.5 54 682-738 613-675 (713)
57 3idu_A Uncharacterized protein 51.0 62 0.0021 28.5 8.5 51 682-736 33-84 (127)
58 1w8o_A Bacterial sialidase; 3D 50.4 73 0.0025 35.8 11.4 64 668-739 364-428 (601)
59 3qis_A Inositol polyphosphate 50.0 30 0.001 36.6 7.4 82 683-765 47-140 (366)
60 3isy_A Bsupi, intracellular pr 42.3 1.1E+02 0.0036 26.8 8.4 53 682-735 18-87 (120)
61 3abz_A Beta-glucosidase I; gly 42.3 51 0.0017 39.0 8.4 44 539-582 618-662 (845)
62 1wic_A Hypothetical protein ri 38.3 96 0.0033 28.2 7.9 52 683-737 36-87 (152)
63 1m1s_A WR4; structural genomic 36.7 91 0.0031 27.0 7.0 50 685-737 26-75 (116)
64 1z9l_A Vesicle-associated memb 36.3 83 0.0028 27.6 7.0 52 683-737 28-79 (128)
65 1wgl_A TOLL-interacting protei 35.7 25 0.00086 26.6 2.9 36 547-582 3-38 (59)
66 4ep8_B Urease subunit beta; al 33.4 1.1E+02 0.0038 25.6 6.5 16 683-698 19-34 (101)
67 1row_A SSP-19, MSP-domain prot 33.2 1.6E+02 0.0055 25.1 8.0 50 685-737 18-67 (109)
68 2cri_A Vesicle-associated memb 32.1 1.1E+02 0.0038 27.5 7.3 52 683-737 32-83 (147)
69 1msp_A MSP, major sperm protei 31.3 1E+02 0.0035 26.9 6.7 51 683-736 26-76 (126)
70 2x41_A Beta-glucosidase; hydro 30.9 52 0.0018 38.3 5.9 70 665-737 597-677 (721)
71 3q48_A Chaperone CUPB2; IG fol 25.9 3.3E+02 0.011 27.0 10.1 66 683-751 43-119 (257)
72 4ac7_B Urease subunit beta; hy 25.3 84 0.0029 27.4 4.7 16 683-698 25-40 (126)
73 4ubp_B Protein (urease (chain 25.3 84 0.0029 27.4 4.7 16 683-698 25-40 (126)
74 2qsv_A Uncharacterized protein 25.1 2E+02 0.007 27.5 8.3 53 682-738 134-187 (220)
75 1ni7_A ER75, hypothetical prot 24.4 48 0.0016 30.4 3.2 30 544-574 80-109 (155)
76 2l04_A Major tail protein V; b 21.7 85 0.0029 25.9 4.0 27 711-738 8-34 (91)
77 3g0m_A Cysteine desulfuration 21.0 46 0.0016 30.0 2.4 33 541-574 70-102 (141)
78 3rfr_A PMOB; membrane, oxidore 20.9 3.9E+02 0.013 28.1 9.5 52 682-737 298-369 (419)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2.8e-126 Score=1105.18 Aligned_cols=632 Identities=40% Similarity=0.686 Sum_probs=575.6
Q ss_pred cCCCCcccCCccCCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccc
Q 004242 117 TTYSPHFLGLESGIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFF 196 (766)
Q Consensus 117 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 196 (766)
++++|+|+|+.+..++|..+++|+||+|||||||||++||+|.+.+++++|.+|+|.|+.|.+|+...||+|++|+++|.
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999998778899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHH
Q 004242 197 KGYESVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAI 276 (766)
Q Consensus 197 ~g~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai 276 (766)
++++... .+...+..+++|..||||||||||||+.+++.+.+|++.|++.||||+|+|++||+|+..++..+++++||
T Consensus 81 ~~~~~~~--~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai 158 (649)
T 3i6s_A 81 KGILAND--PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAM 158 (649)
T ss_dssp HHHHHHC--TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHH
T ss_pred Ccccccc--cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHH
Confidence 7765433 22234556789999999999999999999999999999999999999999999999998889999999999
Q ss_pred HHHHhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEe
Q 004242 277 DKAVADGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKL 356 (766)
Q Consensus 277 ~~a~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~ 356 (766)
+||+++|+||||||||....++..+++.+++++|.++|++||+||||+|+...++++.+||+|+|||+++||.|+..+.+
T Consensus 159 ~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~l 238 (649)
T 3i6s_A 159 DQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTL 238 (649)
T ss_dssp HHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEE
T ss_pred HHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEe
Confidence 99999999999999999877788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEeeeeeccCCC-CceeeeEEccCCCCCCCccccCCCCCCCcc--cceEEEEecCCCchhhhhHHHHhcCceEEEE
Q 004242 357 GNGHSFEGSSLYSGKG-SKQLPLVFGKTAGVSGAEYCINGSLNRKLV--KGKIVICQRGLNSRTGKGEQVKLAGGAGMLL 433 (766)
Q Consensus 357 ~~g~~~~g~~~~~~~~-~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~--~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~ 433 (766)
++++++.|.+++.... ...+|++|+. ..+.|.+..++..++ +||||+|.|+.+.+.+|..+++++|+.|+|+
T Consensus 239 gng~~~~g~sl~~~~~~~~~~plv~~~-----~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~ 313 (649)
T 3i6s_A 239 GNGLKIRGWSLFPARAFVRDSPVIYNK-----TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFI 313 (649)
T ss_dssp TTSCEEEEECCCSSCBCEEEEEEECCT-----TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEE
T ss_pred CCCcEEeeeecccCcccCcceeeEecc-----cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEE
Confidence 9999999999988765 6789999976 457899888888877 9999999999999999999999999999999
Q ss_pred ecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEec-CCCCccccccCCCCCCCCCCcccCcEE
Q 004242 434 LNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFG-NPAPVIASFSSRGPSLVGHDVIKPDVT 512 (766)
Q Consensus 434 ~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~-~~~~~~a~fSs~Gp~~~~~~~lKPDI~ 512 (766)
+|+. .....+.+.+|+++++..+|+.|++|++++.+++++|.+..+..+ .+++.++.||||||+.+.+++|||||+
T Consensus 314 ~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~ 390 (649)
T 3i6s_A 314 SEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDIL 390 (649)
T ss_dssp CCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEE
T ss_pred ecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEE
Confidence 9987 455677889999999999999999999999999999999999988 889999999999999988899999999
Q ss_pred eCCCcEEeecCCCCCCCCCCCCc-cccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccc
Q 004242 513 APGVNILAAWPATTSPSMLKSDD-RRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIA 591 (766)
Q Consensus 513 APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~ 591 (766)
|||++|+++|+....+.....+. +...|..+||||||||||||+||||||+||+|+|++||++||+||.++++.+.|+.
T Consensus 391 APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~ 470 (649)
T 3i6s_A 391 APGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIK 470 (649)
T ss_dssp EECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCE
T ss_pred eCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccc
Confidence 99999999998865554444333 44589999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccccCCccCccccCCCCceecCCchhhHHHhhhcCCCcccceeecccccc--cCCCCCCCCCCCCCC
Q 004242 592 DVGGSSDTPLATAFAFGSGHVDPESASDPGLIYDIATEDYLDYLCSLNYTSLQLALFAGGNFT--CPNPSAFHPGKLNYP 669 (766)
Q Consensus 592 ~~~~~~~~~~~~~~~~G~G~id~~~Al~~~lv~d~~~~d~~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~ln~p 669 (766)
+...+ .++++++||+|+||+.+|++||||||+..+||++|||++||+.++|++|++++++ |+. ...+||||
T Consensus 471 ~~~~~---~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNyP 543 (649)
T 3i6s_A 471 DSDNN---KAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNYP 543 (649)
T ss_dssp ETTTS---SBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCCS
T ss_pred ccccC---CcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCCC
Confidence 87655 7889999999999999999999999999999999999999999999999998888 985 45699999
Q ss_pred ceeeec-cCCcccee--EEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCC-eE
Q 004242 670 SFAVNF-KGNVKNMS--LEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSLRGASNE-SF 745 (766)
Q Consensus 670 s~~~~~-~~~~~~~~--~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~-~~ 745 (766)
||++.+ +.+. ... ++|+|||||||+..+||++.|+.|.|++|+|+|.+|+|++.+|+++|+|||+......+. .|
T Consensus 544 s~~~~~~~~~~-~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~~~~~f 622 (649)
T 3i6s_A 544 SFIALYSIEGN-FTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEGQSRNV 622 (649)
T ss_dssp SEEEEECCSSC-CCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC---CCCE
T ss_pred cEEeecccCCC-CccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCCCceEE
Confidence 999988 4431 012 899999999999999999999999999999999999999889999999999987655555 99
Q ss_pred EEEEEEC--CceeEEeEEEEEeC
Q 004242 746 GSLTWVS--GKYAVKSPIAVTWQ 766 (766)
Q Consensus 746 G~~~~~~--~~~~v~~p~~v~~~ 766 (766)
|+|+|++ ++|.||+||+|.++
T Consensus 623 g~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 623 GSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEEcCCCCeEEEEeEEEEEc
Confidence 9999999 99999999999874
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.3e-113 Score=1000.22 Aligned_cols=612 Identities=43% Similarity=0.749 Sum_probs=515.7
Q ss_pred cCCCCcccCCccCCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccc
Q 004242 117 TTYSPHFLGLESGIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFF 196 (766)
Q Consensus 117 ~~~s~~~~g~~~~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~ 196 (766)
++++|+|+||++ .+|.+..+|+||+|||||||||++||+|+++++++++.+|+|.|+.+.+| .||+|++|+++|.
T Consensus 1 tt~s~~flGl~~--~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~---~~n~k~ig~~~~~ 75 (621)
T 3vta_A 1 TTRSWDFLGFPL--TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNF---RCNRKIIGARSYH 75 (621)
T ss_dssp CCSHHHHTTCCT--TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSC---CCCSSEEEEEECC
T ss_pred CCCChhHcCCCc--cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCc---ccCcceeeeeecc
Confidence 578999999964 68999999999999999999999999999999999999999999999887 4999999999998
Q ss_pred cccccccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHH
Q 004242 197 KGYESVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAI 276 (766)
Q Consensus 197 ~g~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai 276 (766)
.++..... +..+|+|++||||||||||||+.+++.+.+|++.|.++||||+|+|++||+|++.+|..+++++||
T Consensus 76 ~~~~~~~~------~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~ 149 (621)
T 3vta_A 76 IGRPISPG------DVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAY 149 (621)
T ss_dssp CSSSCCTT------CCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHH
T ss_pred cCCccCCC------CCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHH
Confidence 76544332 334789999999999999999999988899998999999999999999999999999999999999
Q ss_pred HHHHhCCCcEEEeccCCCCC-CCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEE
Q 004242 277 DKAVADGVDVLSLSLGGSSR-PYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVK 355 (766)
Q Consensus 277 ~~a~~~g~dVIn~SlG~~~~-~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~ 355 (766)
+||+++|+||||||||+... .+..+++++++++|.++||++|+||||+|+...++++.+||+++|++++.++.|...+.
T Consensus 150 ~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~ 229 (621)
T 3vta_A 150 DDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQ 229 (621)
T ss_dssp HHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEE
T ss_pred HHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEE
Confidence 99999999999999998755 46678899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCceEeeeeeccCCCCceeeeEEccCCC-----CCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceE
Q 004242 356 LGNGHSFEGSSLYSGKGSKQLPLVFGKTAG-----VSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAG 430 (766)
Q Consensus 356 ~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~-----~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g 430 (766)
++++..+.+.++.... ...+++++..... ......|....+++.+++|||++|.++ +..+.......|+.+
T Consensus 230 ~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~---~~~~~~~~~~~Ga~g 305 (621)
T 3vta_A 230 IGNGQSFQGVSINTFD-NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEAS---FGPHEFFKSLDGAAG 305 (621)
T ss_dssp ETTSCEEEEBCCCCSC-CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSC---CCHHHHHHHHTTCSE
T ss_pred eccCceeeeeecccCC-CcccccccccccccccccccccccccccccccccccceEEEEecC---CChhHHhhhhcceeE
Confidence 9999999988876543 5567777765542 223567888899999999999999865 445667778889999
Q ss_pred EEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCc
Q 004242 431 MLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPD 510 (766)
Q Consensus 431 ~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPD 510 (766)
+++.++... ..+.+.+|...++..++..++.|+.....+...+....+......+.++.||||||+...++++|||
T Consensus 306 vi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~~~~~~~va~FSSrGP~~~~~~ilKPD 381 (621)
T 3vta_A 306 VLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTILNASAPVVVSFSSRGPNRATKDVIKPD 381 (621)
T ss_dssp EEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEECTTCCCBCTTSCCCSCTTCTTSCSCC
T ss_pred EEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEeccCCCCceeeecCCCCCCCCCCeeccc
Confidence 999987654 3456789999999999999999999999888888666555557789999999999998777999999
Q ss_pred EEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCcc
Q 004242 511 VTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPI 590 (766)
Q Consensus 511 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~ 590 (766)
|+|||++|+|+++....... +.+...|..|||||||||||||+||||||+||+|+|++||++||+||+++++.+
T Consensus 382 I~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~~--- 455 (621)
T 3vta_A 382 ISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNARF--- 455 (621)
T ss_dssp EEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTTT---
T ss_pred cccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCcccccC---
Confidence 99999999999986543222 234458999999999999999999999999999999999999999999876543
Q ss_pred ccCCCCCCCCCCCcccccCCccCccccCCCCceecCCchhhHHHhhhcCCCcccceeecccccccCCCCCCCCCCCCCCc
Q 004242 591 ADVGGSSDTPLATAFAFGSGHVDPESASDPGLIYDIATEDYLDYLCSLNYTSLQLALFAGGNFTCPNPSAFHPGKLNYPS 670 (766)
Q Consensus 591 ~~~~~~~~~~~~~~~~~G~G~id~~~Al~~~lv~d~~~~d~~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps 670 (766)
.+..+++||+|+|||.+|++||||||+..+||+.|||+++|+.++++.+++....|.........+|||||
T Consensus 456 ---------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS 526 (621)
T 3vta_A 456 ---------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPS 526 (621)
T ss_dssp ---------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSS
T ss_pred ---------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCccccccccc
Confidence 46788999999999999999999999999999999999999999999999998899876655678999999
Q ss_pred eeeeccCCccceeEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCC-eEEEEE
Q 004242 671 FAVNFKGNVKNMSLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSLRGASNE-SFGSLT 749 (766)
Q Consensus 671 ~~~~~~~~~~~~~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~-~~G~~~ 749 (766)
|++.+..+ ...+++|+|||||||....||+++++.|+|++|+|+|.+|+|++.+|+++|+|||+.. .++. +||+|+
T Consensus 527 ~~v~~~~~-~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~ 603 (621)
T 3vta_A 527 FGLSVSPS-QTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLV 603 (621)
T ss_dssp EEEECCSS-CCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEE
T ss_pred EEEEccCC-CceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEE
Confidence 99876543 2368999999999999999999999999999999999999999989999999999864 4566 999999
Q ss_pred EECCceeEEeEEEEEe
Q 004242 750 WVSGKYAVKSPIAVTW 765 (766)
Q Consensus 750 ~~~~~~~v~~p~~v~~ 765 (766)
|+|++|.||+||+|+.
T Consensus 604 w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 604 WSDGVHYVRSPITITS 619 (621)
T ss_dssp EECSSCCCEEEEEEEC
T ss_pred EEcCCEEEEeCEEEEE
Confidence 9999999999999975
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=3.2e-82 Score=766.83 Aligned_cols=532 Identities=23% Similarity=0.281 Sum_probs=421.2
Q ss_pred CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCc----------ccCCCccccccccccccc
Q 004242 129 GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKF----------SQSNCNNKLIGARAFFKG 198 (766)
Q Consensus 129 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~----------~~~~~n~kiig~~~~~~g 198 (766)
+..+|.++++|+||+|||||||||++||+|.+. ..|++.|..+..| ...+||+|++++++|..+
T Consensus 6 ~~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~ 79 (926)
T 1xf1_A 6 VKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD 79 (926)
T ss_dssp CHHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC
T ss_pred cHHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccC
Confidence 356899999999999999999999999999853 5677777643332 234799999999988653
Q ss_pred cccccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC--CCHHHHHHHH
Q 004242 199 YESVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG--CSSSDILAAI 276 (766)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai 276 (766)
. ...|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|++.+ +..+++++||
T Consensus 80 ~--------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai 141 (926)
T 1xf1_A 80 G--------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAI 141 (926)
T ss_dssp S--------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHH
T ss_pred C--------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHH
Confidence 1 12388999999999999987554322 24568999999999999998776 5667899999
Q ss_pred HHHHhCCCcEEEeccCCCCC--CCcccHHHHHHHHHHhCCCEEEEecCCCCCCC-------------CCc--CCCCCceE
Q 004242 277 DKAVADGVDVLSLSLGGSSR--PYYRDTVAIASFGATQSGVFVSCSAGNSGPSI-------------STV--DNTAPWIM 339 (766)
Q Consensus 277 ~~a~~~g~dVIn~SlG~~~~--~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-------------~~~--~~~~p~~i 339 (766)
+||+++|+||||||||.... ....+.+..++++|.++||+||+||||+|+.. .++ +..+||+|
T Consensus 142 ~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vi 221 (926)
T 1xf1_A 142 RDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTL 221 (926)
T ss_dssp HHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSE
T ss_pred HHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceE
Confidence 99999999999999998643 34567788899999999999999999999632 122 33589999
Q ss_pred EEecccCCcceeEEEEe-CCCceEeeeeeccC---CCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCc
Q 004242 340 TVAASYTDRSFPAIVKL-GNGHSFEGSSLYSG---KGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNS 415 (766)
Q Consensus 340 tVga~~~~~~~~~~~~~-~~g~~~~g~~~~~~---~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~ 415 (766)
+|||++.++.+...+.+ +++....+.+++.. .....+|+++.+. .|.+..+ .+++||||+|+|+.|.
T Consensus 222 tVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~-------g~~~~~~--~~v~Gkivl~~rg~~~ 292 (926)
T 1xf1_A 222 TVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR-------GTKEDDF--KDVKGKIALIERGDID 292 (926)
T ss_dssp EEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT-------SCSTTTT--TTCTTSEEEEECCSSC
T ss_pred EEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC-------CCCccch--hhcCCeEEEEECCCCC
Confidence 99999999999888887 55554444444321 1267899999764 3765555 6899999999999999
Q ss_pred hhhhhHHHHhcCceEEEEecCCCCcccc-cccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeE--ec-CCCCcc
Q 004242 416 RTGKGEQVKLAGGAGMLLLNSDKEGEEL-IADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTV--FG-NPAPVI 491 (766)
Q Consensus 416 ~~~~~~~~~~~Ga~g~i~~~~~~~~~~~-~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~-~~~~~~ 491 (766)
+.+|..+++++|+.|+|++++...+... ......+|+.+++..+|+.|+. . +..++.+..+. .. ...+.+
T Consensus 293 ~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~--~~~ti~~~~~~~~~~~~~~~~~ 366 (926)
T 1xf1_A 293 FKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----N--PQKTITFNATPKVLPTASGTKL 366 (926)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----C--SSCEEEECSSCEEEECSSCSBC
T ss_pred HHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----C--CceEEEecccceecccCCccee
Confidence 9999999999999999999987553322 2346789999999999988773 3 44556665543 44 567899
Q ss_pred ccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHH----hhCCCC
Q 004242 492 ASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLK----SVHEDW 567 (766)
Q Consensus 492 a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~P~~ 567 (766)
+.||||||+.+ +++||||+|||++|++++++. .|..+||||||||||||+||||+ +.||+|
T Consensus 367 a~FSSrGp~~~--~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~ 431 (926)
T 1xf1_A 367 SRFSSWGLTAD--GNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDM 431 (926)
T ss_dssp CTTSCCCBCTT--SCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred ccccCCCCCCC--CccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999975 999999999999999999764 89999999999999999999995 569999
Q ss_pred CHHH----HHHHHHhccccCCCCCCccccCCCCCCCCCCCcccccCCccCccccCCCCceecCCchhhHHHhhhcCCCcc
Q 004242 568 STAA----IKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASDPGLIYDIATEDYLDYLCSLNYTSL 643 (766)
Q Consensus 568 s~~~----ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~~~lv~d~~~~d~~~~lc~~~~~~~ 643 (766)
+|+| ||++||+||++++..+ .. ..+++++||+|+||+.+|++|.+ |||..++...
T Consensus 432 sp~~~~~~Iks~L~~TA~~~~~~~-------~~---~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~ 490 (926)
T 1xf1_A 432 TPSERLDLAKKVLMSSATALYDED-------EK---AYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS 490 (926)
T ss_dssp HHHHHHHHHHHHHHHHSBCCEEGG-------GT---EECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS
T ss_pred CHHHHHHHHHHHHHhcCCCcccCC-------CC---ccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc
Confidence 9997 9999999999875421 11 35678999999999999999854 6787665432
Q ss_pred cceeecccccccCCCCCCCCCCCCCCceeeeccCCccceeEEEEEEEEecCCC--CeEEEEEEeC--CCceEEEEeCCeE
Q 004242 644 QLALFAGGNFTCPNPSAFHPGKLNYPSFAVNFKGNVKNMSLEYERSVTNVGTS--YCTYAVKVEE--PNGVLVTITPPIL 719 (766)
Q Consensus 644 ~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~~rtvtn~g~~--~~ty~~~v~~--p~g~~v~v~p~~~ 719 (766)
+|.+..+. .+.+++|||||+|+. ..+|++++.. |.+..++|.|..|
T Consensus 491 --------------------------~i~l~~~~----~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l 540 (926)
T 1xf1_A 491 --------------------------KVHLNNVS----DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVL 540 (926)
T ss_dssp --------------------------CEEEEEEC----SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred --------------------------eeeccccC----ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEecccee
Confidence 22222222 378899999999985 4678888764 7788899988776
Q ss_pred EEeec-------ceEEEEEEEEEEec--------CCCCC-eEEEEEEE--CCcee-EEeEEEEEe
Q 004242 720 SFQKI-------GEILSYKVTFVSLR--------GASNE-SFGSLTWV--SGKYA-VKSPIAVTW 765 (766)
Q Consensus 720 ~~~~~-------~~~~~~~vt~~~~~--------~~~~~-~~G~~~~~--~~~~~-v~~p~~v~~ 765 (766)
.|... ||+++|+|||++.. .+++. +||+|+|+ ++.|. ||+||++..
T Consensus 541 ~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 541 YETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred EeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 55543 99999999999751 34566 89999999 46565 999999863
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.2e-61 Score=552.13 Aligned_cols=340 Identities=33% Similarity=0.478 Sum_probs=275.7
Q ss_pred CCcEEEEecceeeEEEEEeCHHHHhhh-----------ccCCCeEEEEcccccccccCCC--CcccCCccCCCccccCCC
Q 004242 72 PPQILYAYENAISGFSAKLSTKQLKSL-----------ETVDGFLSATPDELLTLHTTYS--PHFLGLESGIGLWDATNL 138 (766)
Q Consensus 72 ~~~~~~~y~~~~~g~s~~l~~~~~~~L-----------~~~p~V~~v~~~~~~~~~~~~s--~~~~g~~~~~~~~~~~~~ 138 (766)
+.+++++|+ .|+||+++++++++++| +++|+|++|++++.+++..... ...+.......+|..+++
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYD 137 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCC
Confidence 468899997 79999999999999999 8899999999999887753221 011222234678999999
Q ss_pred CCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccCCCCCCCC
Q 004242 139 AKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVDYRSPRDA 218 (766)
Q Consensus 139 G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~d~ 218 (766)
|+||+|||||||||++||+|.++ +++.++|..+. ..+.|+
T Consensus 138 G~gv~VaViDtGid~~Hpdl~~~---------------------------i~~~~d~~~~~-------------~~~~D~ 177 (539)
T 3afg_A 138 GSGITIGIIDTGIDASHPDLQGK---------------------------VIGWVDFVNGK-------------TTPYDD 177 (539)
T ss_dssp CTTCEEEEEESBCCTTSGGGTTT---------------------------EEEEEETTTCC-------------SSCCBS
T ss_pred CCCcEEEEEecCCCCCChHHhCC---------------------------EeeeEECCCCC-------------CCCCCC
Confidence 99999999999999999999643 44445554321 146789
Q ss_pred CCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhC----CCcEEEeccCC
Q 004242 219 QGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVAD----GVDVLSLSLGG 293 (766)
Q Consensus 219 ~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~----g~dVIn~SlG~ 293 (766)
.||||||||||||+..+. .|.+.||||+|+|+++|++++.+ +..+++++||+||+++ |++|||||||.
T Consensus 178 ~gHGThVAgiiag~~~~~-------~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~ 250 (539)
T 3afg_A 178 NGHGTHVASIAAGTGAAS-------NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGS 250 (539)
T ss_dssp SSHHHHHHHHHHCCCGGG-------TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCC
T ss_pred CCCHHHHHHHHhCcCccC-------CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCC
Confidence 999999999999985332 23458999999999999998876 7889999999999986 89999999998
Q ss_pred CCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC--CcCCCCCceEEEecccCCcceeEEEEeCCCceEeeeeeccCC
Q 004242 294 SSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS--TVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGK 371 (766)
Q Consensus 294 ~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~--~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 371 (766)
.......+.+..++.++.++|++||+||||+|+... ..+...+++|+|||++.
T Consensus 251 ~~~~~~~~~l~~ai~~a~~~GvlvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~------------------------- 305 (539)
T 3afg_A 251 SQSSDGTDSLSQAVNNAWDAGLVVVVAAGNSGPNKYTVGSPAAASKVITVGAVDK------------------------- 305 (539)
T ss_dssp CSCCCSCSHHHHHHHHHHHTTCEEEEECCSCCSSSSCCCTTTTCSSSEEEEEECT-------------------------
T ss_pred CCCCccchHHHHHHHHHHhcCCEEEEECCCCCCCCCcccCCccCCceEEEeeecC-------------------------
Confidence 765555678888999999999999999999998654 45678899999999641
Q ss_pred CCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccccccCcccc
Q 004242 372 GSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLP 451 (766)
Q Consensus 372 ~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p 451 (766)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCCCCCCC
Q 004242 452 AATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATTSPSML 531 (766)
Q Consensus 452 ~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~ 531 (766)
.+.++.||||||+.+ +++||||+|||++|+++++......
T Consensus 306 ------------------------------------~~~~a~fSs~Gp~~~--~~~kpdi~APG~~I~s~~~~~~~~~-- 345 (539)
T 3afg_A 306 ------------------------------------YDVITDFSSRGPTAD--NRLKPEVVAPGNWIIAARASGTSMG-- 345 (539)
T ss_dssp ------------------------------------TSCBCSSSCCCCCTT--CBCCCSEEEECSSEEEECCTTCCCS--
T ss_pred ------------------------------------CcccccccCCCCCCC--CCCcccEecCcCCEEeeccCCCCCC--
Confidence 126899999999986 8999999999999999986532110
Q ss_pred CCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcccccCCc
Q 004242 532 KSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFGSGH 611 (766)
Q Consensus 532 ~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~ 611 (766)
+.....|..++|||||||||||++|||+|++|+|++++||++|++||+++... ..+++.||+|+
T Consensus 346 --~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~--------------~~~~~~~G~G~ 409 (539)
T 3afg_A 346 --QPINDYYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPD--------------EIADIAYGAGR 409 (539)
T ss_dssp --EECSSSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGG--------------GCSBTTTBTCB
T ss_pred --CCCcccccccCchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCC--------------CCCccCccCCc
Confidence 11122699999999999999999999999999999999999999999976421 13456899999
Q ss_pred cCccccCCC
Q 004242 612 VDPESASDP 620 (766)
Q Consensus 612 id~~~Al~~ 620 (766)
||+.+|++.
T Consensus 410 vn~~~Al~~ 418 (539)
T 3afg_A 410 VNAYKAAYY 418 (539)
T ss_dssp CCHHHHHTG
T ss_pred cCHHHHhhh
Confidence 999999984
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.5e-58 Score=512.15 Aligned_cols=322 Identities=27% Similarity=0.399 Sum_probs=263.7
Q ss_pred CCCcEEEEecceeeEEEEEeCHHHHhhhccCCCeEEEEcccccccccCCC-----------CcccCCcc--CCCccccCC
Q 004242 71 TPPQILYAYENAISGFSAKLSTKQLKSLETVDGFLSATPDELLTLHTTYS-----------PHFLGLES--GIGLWDATN 137 (766)
Q Consensus 71 ~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~~~~~~s-----------~~~~g~~~--~~~~~~~~~ 137 (766)
.+.+++++|. .+++|+++++++++++|+++|+|++|++++.++++.... ...|++.. ...+|..+
T Consensus 22 ~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~- 99 (395)
T 2z2z_A 22 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT- 99 (395)
T ss_dssp TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-
T ss_pred cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-
Confidence 4578999998 599999999999999999999999999999887643211 12355443 35789988
Q ss_pred CCCC--cEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccCCCCC
Q 004242 138 LAKD--VIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVDYRSP 215 (766)
Q Consensus 138 ~G~g--v~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~ 215 (766)
+|+| |+|||||||||++||+|.++ +...++|..+... . +..++
T Consensus 100 ~G~g~~v~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~~--~------~~~~~ 144 (395)
T 2z2z_A 100 DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRGKVS--T------KLRDC 144 (395)
T ss_dssp SSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGGCCB--C------CHHHH
T ss_pred CCCCCcEEEEEEcCCCCCCChhHhhc---------------------------cccCccccCCccc--C------CCCCC
Confidence 9999 99999999999999999753 2222333322100 0 00124
Q ss_pred CCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhC------------
Q 004242 216 RDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVAD------------ 282 (766)
Q Consensus 216 ~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------------ 282 (766)
.|..||||||||||+|.. ++ .| +.||||+|+|+.+|++++.+ +..+++++||+||+++
T Consensus 145 ~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~ 215 (395)
T 2z2z_A 145 ADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGI 215 (395)
T ss_dssp BCSSSHHHHHHHHHHCCC-SS---SS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSC
T ss_pred CCCCCCHHHHHHHHHeec-CC---Cc-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCcccccccccccc
Confidence 678999999999999973 21 12 37999999999999998877 7889999999999988
Q ss_pred --------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEE
Q 004242 283 --------GVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIV 354 (766)
Q Consensus 283 --------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~ 354 (766)
+++|||||||.... ...+..++.++.++|+++|+||||+|.....++...|++|+|||++.
T Consensus 216 ~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------- 284 (395)
T 2z2z_A 216 IAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDS-------- 284 (395)
T ss_dssp CTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT--------
T ss_pred ccccccCCCCeEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecC--------
Confidence 99999999998643 35667777789999999999999999887788889999999999642
Q ss_pred EeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEe
Q 004242 355 KLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLL 434 (766)
Q Consensus 355 ~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~ 434 (766)
T Consensus 285 -------------------------------------------------------------------------------- 284 (395)
T 2z2z_A 285 -------------------------------------------------------------------------------- 284 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeC
Q 004242 435 NSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAP 514 (766)
Q Consensus 435 ~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 514 (766)
.+.++.||++|| +|+||
T Consensus 285 -----------------------------------------------------~~~~a~fS~~G~----------~v~AP 301 (395)
T 2z2z_A 285 -----------------------------------------------------NDNIASFSNRQP----------EVSAP 301 (395)
T ss_dssp -----------------------------------------------------TSCBCTTSCSSC----------SEEEE
T ss_pred -----------------------------------------------------CCCCCcccCCCC----------CEEeC
Confidence 127889999998 67999
Q ss_pred CCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCC-------------CCCHHHHHHHHHhccc
Q 004242 515 GVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHE-------------DWSTAAIKSALMTTAY 581 (766)
Q Consensus 515 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-------------~~s~~~ik~~L~~TA~ 581 (766)
|++|+++++.+ .|..++|||||||||||++|||+|++| .|++.+||++|++||+
T Consensus 302 G~~i~s~~~~~-------------~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~ 368 (395)
T 2z2z_A 302 GVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITAD 368 (395)
T ss_dssp CSSEEEEETTT-------------EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSB
T ss_pred CCCeeeecCCC-------------ceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhcc
Confidence 99999999764 899999999999999999999999999 9999999999999999
Q ss_pred cCCCCCCccccCCCCCCCCCCCcccccCCccCccccCCC
Q 004242 582 TLNNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASDP 620 (766)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~~ 620 (766)
++.. +..+..||||+||+.+|++.
T Consensus 369 ~~~~---------------~g~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 369 DLGP---------------TGWDADYGYGVVRAALAVQA 392 (395)
T ss_dssp CCSS---------------SSSBTTTBTCBCCHHHHHHH
T ss_pred ccCC---------------CCCCCCccCceeCHHHHHHH
Confidence 7632 23456899999999999863
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=7.4e-57 Score=511.25 Aligned_cols=334 Identities=19% Similarity=0.207 Sum_probs=266.7
Q ss_pred CCcEEEEecceeeEEEEEeCHHHHhhhcc-CCCeEEEEcccccccccCCCC----------cccCCccC---CCccccCC
Q 004242 72 PPQILYAYENAISGFSAKLSTKQLKSLET-VDGFLSATPDELLTLHTTYSP----------HFLGLESG---IGLWDATN 137 (766)
Q Consensus 72 ~~~~~~~y~~~~~g~s~~l~~~~~~~L~~-~p~V~~v~~~~~~~~~~~~s~----------~~~g~~~~---~~~~~~~~ 137 (766)
+.++++.|. .|++|+++++++++++|++ +|+|++|++++.+++...... ..|++..+ ..+|..++
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~ 143 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLP 143 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCC
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccC
Confidence 467889996 5999999999999999999 999999999998877543321 23444433 36899999
Q ss_pred CCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccCCCCCCC
Q 004242 138 LAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVDYRSPRD 217 (766)
Q Consensus 138 ~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~d 217 (766)
+|+||+|||||||||++||+|.++. |.+ .+.|..+..+.....+...+...+.|
T Consensus 144 ~G~gv~VaViDtGid~~Hp~~~~~~-------~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~d 197 (471)
T 3t41_A 144 KHANTKIAIIDTGVMKNHDDLKNNF-------STD-------------------SKNLVPLNGFRGTEPEETGDVHDVND 197 (471)
T ss_dssp SSCCCCEEEEESCCCTTCTTTTTTB-------CTT-------------------CEECCCTTCGGGCCTTCCCCTTCCCC
T ss_pred CCCCcEEEEEeCCCCCCChhHhcCc-------ccC-------------------CcccccCCCccCCCcccCCCCCCCcC
Confidence 9999999999999999999997641 111 11111111111111111122335788
Q ss_pred CCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHHHHHHhCCCcEEEeccCCCCC-
Q 004242 218 AQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVADGVDVLSLSLGGSSR- 296 (766)
Q Consensus 218 ~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~- 296 (766)
..||||||||||+|++. +.||||+|+|+.+|++++..+..+++++||+||++++++|||||||....
T Consensus 198 ~~gHGT~vAgiiaa~g~------------~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~ 265 (471)
T 3t41_A 198 RKGHGTMVSGQTSANGK------------LIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIIL 265 (471)
T ss_dssp SSSHHHHHHHHHHCBSS------------SBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEE
T ss_pred CCCccchhhheeecCCc------------eeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCC
Confidence 99999999999998631 47999999999999998877899999999999999999999999997321
Q ss_pred ------------CCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC------------------CcCCCCCceEEEecccC
Q 004242 297 ------------PYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS------------------TVDNTAPWIMTVAASYT 346 (766)
Q Consensus 297 ------------~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~------------------~~~~~~p~~itVga~~~ 346 (766)
....+.+..++..+.++|++||+||||+|.... ..+...|++|+|||++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~~ 345 (471)
T 3t41_A 266 DKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTDQ 345 (471)
T ss_dssp CTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEECT
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeCC
Confidence 022356778888899999999999999997654 26678899999999642
Q ss_pred CcceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhc
Q 004242 347 DRSFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLA 426 (766)
Q Consensus 347 ~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~ 426 (766)
+
T Consensus 346 ~------------------------------------------------------------------------------- 346 (471)
T 3t41_A 346 K------------------------------------------------------------------------------- 346 (471)
T ss_dssp T-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred CceEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCc
Q 004242 427 GGAGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDV 506 (766)
Q Consensus 427 Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~ 506 (766)
+.+++||++||+.
T Consensus 347 --------------------------------------------------------------~~~a~fS~~G~~~----- 359 (471)
T 3t41_A 347 --------------------------------------------------------------SNLSEFSNFGMNY----- 359 (471)
T ss_dssp --------------------------------------------------------------SSBCTTCCBCTTT-----
T ss_pred --------------------------------------------------------------CCCCCccCCCCCC-----
Confidence 2688999999974
Q ss_pred ccCcEEeCCCc----------------------EEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhC
Q 004242 507 IKPDVTAPGVN----------------------ILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVH 564 (766)
Q Consensus 507 lKPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 564 (766)
|||+|||++ |+++++.. .|..++|||||||||||++|||+|++
T Consensus 360 --~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~ 424 (471)
T 3t41_A 360 --TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-------------RYIYQAGTALATPKVSGALALIIDKY 424 (471)
T ss_dssp --CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHH
T ss_pred --CeEEecCCCcccccccccccccccccccCceeEecCCCC-------------CEEeecchHHHHHHHHHHHHHHHHhc
Confidence 499999987 88888654 79999999999999999999999999
Q ss_pred C-CCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcccccCCccCccccCCCC
Q 004242 565 E-DWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASDPG 621 (766)
Q Consensus 565 P-~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~~~ 621 (766)
| .++|++||++|++||.+.. ..++..||||+||+.+|++..
T Consensus 425 p~~~~~~~v~~~L~~tA~~~~----------------~~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 425 HLEKHPDKAIELLYQHGTSKN----------------NKPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp TCTTCHHHHHHHHHHHSBCCS----------------CCCHHHHTTCBBCHHHHTTTT
T ss_pred cCCCCHHHHHHHHHHhCCCCC----------------CCCcCccccChhCHHHHHHHH
Confidence 9 8999999999999999652 246678999999999999843
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=1e-57 Score=523.79 Aligned_cols=333 Identities=22% Similarity=0.241 Sum_probs=57.1
Q ss_pred ceEEEEeCCCCCcCCCCCccHHHHHHHHHhhhcccccccccccccCCCCcEEEEecceeeEEEEEeCHHHHhhhccCCCe
Q 004242 25 TTYVIHMDKSKIAANHSPGSVRQFYEAVIDSINKFSSQQEDQEQETTPPQILYAYENAISGFSAKLSTKQLKSLETVDGF 104 (766)
Q Consensus 25 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V 104 (766)
++|||+||++..... ...+.+++...+.+. ....+++++|++.|+||+++++++++++|+++|+|
T Consensus 76 g~YIV~lk~~~~~~~--~~~~~~~l~a~~~~~-------------g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V 140 (692)
T 2p4e_P 76 GTYVVVLKEETHLSQ--SERTARRLQAQAARR-------------GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHV 140 (692)
T ss_dssp EEEEEEECTTCCHHH--HHHHHHHHHHHHHHT-------------TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTE
T ss_pred CcEEEEECCCCCHHH--HHHHHHHHHHHHhhc-------------ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCc
Confidence 389999998775433 222223332222111 13568999999999999999999999999999999
Q ss_pred EEEEcccccccccCCCCcccCCccC------CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCC
Q 004242 105 LSATPDELLTLHTTYSPHFLGLESG------IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGT 178 (766)
Q Consensus 105 ~~v~~~~~~~~~~~~s~~~~g~~~~------~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~ 178 (766)
++|+|++.++.+. ..|++.++ ...|..+.+|+||+|||||||||++||+|.++.. |.
T Consensus 141 ~~Vepd~~v~~~~----~pWgL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~------- 203 (692)
T 2p4e_P 141 DYIEEDSSVFAQS----IPWNLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT------- 203 (692)
T ss_dssp EEEEEEEEEEEC--------------------------------------------------------------------
T ss_pred eEEEeccccccCC----CCcchhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------
Confidence 9999999876521 23555543 2368888999999999999999999999986510 10
Q ss_pred CcccCCCccccccccccccccccccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEE
Q 004242 179 KFSQSNCNNKLIGARAFFKGYESVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAA 258 (766)
Q Consensus 179 ~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~ 258 (766)
+| .+..+ .++. .....+.|..||||||||||+|+. .||||+|+|++
T Consensus 204 ~~-------------~~~~d---~dg~----~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~ 249 (692)
T 2p4e_P 204 DF-------------ENVPE---EDGT----RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRS 249 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cc-------------ccccC---CCCC----cccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEE
Confidence 00 00000 0000 001246789999999999999873 59999999999
Q ss_pred eeeecCCC-CCHHHHHHHHHHHHhC------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC-
Q 004242 259 YKACWSLG-CSSSDILAAIDKAVAD------GVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIST- 330 (766)
Q Consensus 259 ~kv~~~~g-~~~~~i~~ai~~a~~~------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~- 330 (766)
+||+++.| ++.+++++||+|++++ +++|||||||+.. .+.+..++.++.++|++||+||||+|.....
T Consensus 250 vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~ 325 (692)
T 2p4e_P 250 LRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLY 325 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCcc
Confidence 99998876 7888999999999986 8999999999753 3445566668899999999999999987543
Q ss_pred cCCCCCceEEEecccCCcceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEe
Q 004242 331 VDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQ 410 (766)
Q Consensus 331 ~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~ 410 (766)
.++..|++|+|||++.+..
T Consensus 326 sPA~~~~vItVGA~d~~~~------------------------------------------------------------- 344 (692)
T 2p4e_P 326 SPASAPEVITVGATNAQDQ------------------------------------------------------------- 344 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcccCCCEEEEEEEcCCCC-------------------------------------------------------------
Confidence 4778899999999753220
Q ss_pred cCCCchhhhhHHHHhcCceEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCc
Q 004242 411 RGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPV 490 (766)
Q Consensus 411 ~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~ 490 (766)
....
T Consensus 345 ----------------------------------------------------------------------------~a~~ 348 (692)
T 2p4e_P 345 ----------------------------------------------------------------------------PVTL 348 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------cccc
Confidence 0001
Q ss_pred cccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHH
Q 004242 491 IASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTA 570 (766)
Q Consensus 491 ~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~ 570 (766)
-+.||+|||. |||+|||++|+++++... ..|..++|||||||||||++|||++++|+|+|+
T Consensus 349 ss~fSn~G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~ 409 (692)
T 2p4e_P 349 GTLGTNFGRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLA 409 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCCCc--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHH
Confidence 1238999984 599999999999987531 178999999999999999999999999999999
Q ss_pred HHHHHHHhccccC
Q 004242 571 AIKSALMTTAYTL 583 (766)
Q Consensus 571 ~ik~~L~~TA~~~ 583 (766)
+||++|++||.+.
T Consensus 410 qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 410 ELRQRLIHFSAKD 422 (692)
T ss_dssp -------------
T ss_pred HHHHHHHHhcccc
Confidence 9999999999864
No 8
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=3.7e-55 Score=491.91 Aligned_cols=381 Identities=26% Similarity=0.335 Sum_probs=276.3
Q ss_pred cCCcc--CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCcccccccccccccccc
Q 004242 124 LGLES--GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYES 201 (766)
Q Consensus 124 ~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~ 201 (766)
|+++. ...+|..+ |+||+|||||||||++||+|.++ .|. + +++...
T Consensus 6 W~l~~i~~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~~-------------------~-~~~~~~--- 53 (441)
T 1y9z_A 6 WGQTFVGATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NVT-------------------G-TNNSGT--- 53 (441)
T ss_dssp HHHHHTTCSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EEE-------------------E-CCCTTS---
T ss_pred CChhhcChhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------ccc-------------------C-cccCCC---
Confidence 44443 35688865 77999999999999999999754 111 1 111100
Q ss_pred ccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCc--eEEEeeeecCCC-CCHHHHHHHHHH
Q 004242 202 VVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTS--RIAAYKACWSLG-CSSSDILAAIDK 278 (766)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~ 278 (766)
.++..+.|..||||||||||+|..++ .| +.||||+| +|+.+|+++..+ +..+++++||+|
T Consensus 54 --------~~~~~~~d~~gHGT~vAgiia~~~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~ 116 (441)
T 1y9z_A 54 --------GNWYQPGNNNAHGTHVAGTIAAIANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDT 116 (441)
T ss_dssp --------CCTTCCCSSCCHHHHHHHHHHCCCSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHH
T ss_pred --------CCCCCCCCCCCcHHHHHHHHhcccCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHH
Confidence 01124678899999999999998522 12 37999995 999999998877 788899999999
Q ss_pred HHhC-CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeE-----
Q 004242 279 AVAD-GVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPA----- 352 (766)
Q Consensus 279 a~~~-g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~----- 352 (766)
|+++ |++|||||||.... ...+..++.+|.++|++||+||||+|.....++...+++|+|||++.+.....
T Consensus 117 a~~~~g~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g 193 (441)
T 1y9z_A 117 CVNSGGANVVTMSLGGSGS---TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYT 193 (441)
T ss_dssp HHHTTCCSEEEECCCBSCC---BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCC
T ss_pred HHHhcCCcEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCC
Confidence 9999 99999999998643 24566777789999999999999999888888889999999999887643211
Q ss_pred --------------EEEeCCCc----eEeeeeeccCCC---Cceee--eEEccCC----CCCCCccccCC--CCCCCccc
Q 004242 353 --------------IVKLGNGH----SFEGSSLYSGKG---SKQLP--LVFGKTA----GVSGAEYCING--SLNRKLVK 403 (766)
Q Consensus 353 --------------~~~~~~g~----~~~g~~~~~~~~---~~~~~--lv~~~~~----~~~~~~~c~~~--~~~~~~~~ 403 (766)
.+..+++. .+.|.+.+.... ...++ +.|.... .......|... .++..+++
T Consensus 194 ~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~ 273 (441)
T 1y9z_A 194 DQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMA 273 (441)
T ss_dssp TTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCT
T ss_pred CceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCcc
Confidence 11111111 222333322110 00000 1111110 01123457654 46778999
Q ss_pred ceEEEEecCCC-----chhhhhHHHHhcCceEEEEecCCCCccc------ccccCccccEEEEcHhhHHHHHHHHhcCCC
Q 004242 404 GKIVICQRGLN-----SRTGKGEQVKLAGGAGMLLLNSDKEGEE------LIADAHVLPAATLGASAGKAVKKYVNSTKR 472 (766)
Q Consensus 404 gkiv~~~~g~~-----~~~~~~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~ 472 (766)
|||++|+|+.+ .+.+|..+++++|+.|+|++++...... .......+|.+.++..+|+.|+.|+.+.
T Consensus 274 gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~-- 351 (441)
T 1y9z_A 274 NKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS-- 351 (441)
T ss_dssp TEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE--
T ss_pred ccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC--
Confidence 99999999876 7788999999999999999988653111 1233467999999999999999886421
Q ss_pred CeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhh
Q 004242 473 PTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPH 552 (766)
Q Consensus 473 ~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 552 (766)
++ + ++.. ...|..++||||||||
T Consensus 352 --~t----------------------------------~--------~~~~-------------~~~y~~~sGTSmAaP~ 374 (441)
T 1y9z_A 352 --TT----------------------------------V--------SNQG-------------NQDYEYYNGTSMATPH 374 (441)
T ss_dssp --EE----------------------------------E--------EEEE-------------EESEEEECSHHHHHHH
T ss_pred --cc----------------------------------c--------cccc-------------CCCceeecccccCCcc
Confidence 11 1 1111 1279999999999999
Q ss_pred hhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcccccCCccCccccCCCCceecCCchhhH
Q 004242 553 VSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASDPGLIYDIATEDYL 632 (766)
Q Consensus 553 VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~~~lv~d~~~~d~~ 632 (766)
|||++|||+|+||+|+|++||++||+||++++.. ..+.+||+|+||+.+|+ ||+
T Consensus 375 VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~---------------g~~~~~G~G~vn~~~A~-----------~~~ 428 (441)
T 1y9z_A 375 VSGVATLVWSYHPECSASQVRAALNATADDLSVA---------------GRDNQTGYGMINAVAAK-----------AYL 428 (441)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSS---------------SCBTTTBTCBCCHHHHH-----------HHH
T ss_pred cchHHHHHHHHCCCCCHHHHHHHHHhhchhhccC---------------CCcccccccccCHHHHH-----------HHH
Confidence 9999999999999999999999999999987532 23568999999999996 599
Q ss_pred HHhhhcCCC
Q 004242 633 DYLCSLNYT 641 (766)
Q Consensus 633 ~~lc~~~~~ 641 (766)
.|||.++++
T Consensus 429 ~~lc~~~~~ 437 (441)
T 1y9z_A 429 DESCTGPTD 437 (441)
T ss_dssp HHCTTCC--
T ss_pred HhhhcCCCC
Confidence 999998764
No 9
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=3.2e-54 Score=498.33 Aligned_cols=373 Identities=23% Similarity=0.258 Sum_probs=272.3
Q ss_pred CCCceEEEEeCCCCCcCCCCCccHHHHHHHHHhhhcccccccccccccCCCCcEEEEecceeeEEEEEeCH----HHHhh
Q 004242 22 GKQTTYVIHMDKSKIAANHSPGSVRQFYEAVIDSINKFSSQQEDQEQETTPPQILYAYENAISGFSAKLST----KQLKS 97 (766)
Q Consensus 22 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~----~~~~~ 97 (766)
..+++|||+||+... .+++++. .+.++.+++. .+++++++++. +.+++
T Consensus 29 ~~~~~~IV~~k~~~~------------~~~~~~~---------------~g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~ 80 (671)
T 1r6v_A 29 YTEGKILVGYNDRSE------------VDKIVKA---------------VNGKVVLELP-QIKVVSIKLNGMTVKQAYDK 80 (671)
T ss_dssp BCTTEEEEEESSHHH------------HHHHHHH---------------HTCEEEEEEG-GGTEEEEECSSCCHHHHHHH
T ss_pred cCCccEEEEECCCcC------------HHHHHHh---------------cCCeEEEEcC-CCcEEEEEeCCcCHHHHHHH
Confidence 367999999997321 1222322 2356777886 68999999864 33566
Q ss_pred hc--cCCCeEEEEcccccccccC---C------------------------CCcccCCccC--CCc-cccCCCCCCcEEE
Q 004242 98 LE--TVDGFLSATPDELLTLHTT---Y------------------------SPHFLGLESG--IGL-WDATNLAKDVIVG 145 (766)
Q Consensus 98 L~--~~p~V~~v~~~~~~~~~~~---~------------------------s~~~~g~~~~--~~~-~~~~~~G~gv~Va 145 (766)
|+ ++|+|++|||+..+++... . ....|++..+ ..+ |+. ++|+||+||
T Consensus 81 l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I~~~~a~w~~-~tG~gV~VA 159 (671)
T 1r6v_A 81 IKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAIGVTQQLWEE-ASGTNIIVA 159 (671)
T ss_dssp HTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHTTCCHHHHHH-CSCTTCEEE
T ss_pred HHhccCCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhccCCchhhhhc-cCCCCCEEE
Confidence 65 4899999999977654310 0 0123444332 455 888 899999999
Q ss_pred EEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccCCCCCCCCCCCchhH
Q 004242 146 VIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVDYRSPRDAQGHGTHT 225 (766)
Q Consensus 146 VIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~~d~~gHGThV 225 (766)
|||||||++||+|.++- +.++.+..+ ... ....+..|..||||||
T Consensus 160 VIDTGVd~~HpdL~~~~---------------------------~~g~~~~~~------~~~--p~~~d~~d~~gHGThV 204 (671)
T 1r6v_A 160 VVDTGVDGTHPDLEGQV---------------------------IAGYRPAFD------EEL--PAGTDSSYGGSAGTHV 204 (671)
T ss_dssp EEESCCBTTSGGGTTTB---------------------------CCEEEGGGT------EEE--CTTCBCCTTCSHHHHH
T ss_pred EEeCCCCCCCccccccE---------------------------EecccccCC------CcC--CCCCCCccCCCcchhh
Confidence 99999999999997641 111111111 000 0011345678999999
Q ss_pred HHhhccccccccccccccCCcccccccCceEEEeeeecC------CC-CCHHHHHHHHHHHHhCCCcEEEeccCCCCCCC
Q 004242 226 ASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWS------LG-CSSSDILAAIDKAVADGVDVLSLSLGGSSRPY 298 (766)
Q Consensus 226 Agi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~a~~~g~dVIn~SlG~~~~~~ 298 (766)
||||||.. ++ .| +.||||+|+|+++|+++. .+ .....+++||+||+++|++|||||||...
T Consensus 205 AGiIAa~~-ng---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~--- 272 (671)
T 1r6v_A 205 AGTIAAKK-DG---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG--- 272 (671)
T ss_dssp HHHHHCCC-SS---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC---
T ss_pred hhhhhccC-CC---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC---
Confidence 99999973 21 12 379999999999999986 23 44567899999999999999999999853
Q ss_pred cccHHHHHHHHHHhCCCEEEEecCCCCCCC-CCcCCCCCceEEEecccCCcceeEEEEeCCCceEeeeeeccCCCCceee
Q 004242 299 YRDTVAIASFGATQSGVFVSCSAGNSGPSI-STVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGKGSKQLP 377 (766)
Q Consensus 299 ~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 377 (766)
....+..++..|.++|+++|+||||+|... ..++...|++|+|||++.+..
T Consensus 273 ~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~---------------------------- 324 (671)
T 1r6v_A 273 YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG---------------------------- 324 (671)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT----------------------------
T ss_pred CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC----------------------------
Confidence 345677888899999999999999999875 567788899999999642110
Q ss_pred eEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccccccCccccEEEEcH
Q 004242 378 LVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLPAATLGA 457 (766)
Q Consensus 378 lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~ 457 (766)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCCCCCC-----CC
Q 004242 458 SAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATTSPSM-----LK 532 (766)
Q Consensus 458 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~-----~~ 532 (766)
...++.|||+||.. ||+|||++|+++++....... ..
T Consensus 325 ------------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~ 366 (671)
T 1r6v_A 325 ------------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENV 366 (671)
T ss_dssp ------------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTC
T ss_pred ------------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccc
Confidence 01478999999975 999999999999875421100 00
Q ss_pred CCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcccccCCcc
Q 004242 533 SDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFGSGHV 612 (766)
Q Consensus 533 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~i 612 (766)
.......|..++|||||||||||++|||+|++|+|+|.+||++|++||.++.. +..+..||||+|
T Consensus 367 ~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~---------------~g~d~~~G~G~v 431 (671)
T 1r6v_A 367 PATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNG---------------NGWDHDTGYGLV 431 (671)
T ss_dssp CCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSS---------------SSCBTTTBTCBC
T ss_pred cccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCC---------------CCCCCCccccee
Confidence 01123379999999999999999999999999999999999999999997642 234568999999
Q ss_pred CccccCCCCceecCCchhh
Q 004242 613 DPESASDPGLIYDIATEDY 631 (766)
Q Consensus 613 d~~~Al~~~lv~d~~~~d~ 631 (766)
|+.+|++..|..+....||
T Consensus 432 na~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 432 KLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp CHHHHHHCCCCSSSEEEEE
T ss_pred CHHHHhhhhcCCCCCccce
Confidence 9999999877766544333
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.9e-53 Score=464.83 Aligned_cols=306 Identities=21% Similarity=0.214 Sum_probs=199.9
Q ss_pred CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccc
Q 004242 130 IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINET 209 (766)
Q Consensus 130 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 209 (766)
..+|.++..|++|+|||||||||++||+|++..+.+....|+..++........ .+..+.. . ...++..........
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~~~~~~~~~~ 97 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYA-AFQSIRD-Q-GLKGKEKEEALEAVI 97 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHH-HHHHHHH-H-TCCSHHHHHHHHHHC
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCccccc-ccccccC-c-ccccccccccccccc
Confidence 568999999999999999999999999999887777777887765532211000 0000000 0 000000000000000
Q ss_pred cCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC------CCHHHHHHHHHHHHhCC
Q 004242 210 VDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG------CSSSDILAAIDKAVADG 283 (766)
Q Consensus 210 ~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~i~~ai~~a~~~g 283 (766)
.+..++.|.+||||||||||||+.++ .+.||||+|+|+.+|++.... ....++++||+||++.|
T Consensus 98 ~~~~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g 167 (357)
T 4h6x_A 98 PDTKDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELG 167 (357)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTT
T ss_pred CCCCCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcC
Confidence 11123457789999999999997422 237999999999999975421 44567889999999999
Q ss_pred CcEEEeccCCCCC-CCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEeCCCceE
Q 004242 284 VDVLSLSLGGSSR-PYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSF 362 (766)
Q Consensus 284 ~dVIn~SlG~~~~-~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~ 362 (766)
++|||||||.... ....+.+..++.++.++|+++|+||||+|.....++...|++|+|||++.
T Consensus 168 ~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~---------------- 231 (357)
T 4h6x_A 168 ANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKV---------------- 231 (357)
T ss_dssp CSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECT----------------
T ss_pred CCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEecc----------------
Confidence 9999999997654 34556788888899999999999999999888888888999999999642
Q ss_pred eeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCccc
Q 004242 363 EGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEE 442 (766)
Q Consensus 363 ~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 442 (766)
T Consensus 232 -------------------------------------------------------------------------------- 231 (357)
T 4h6x_A 232 -------------------------------------------------------------------------------- 231 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeec
Q 004242 443 LIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAW 522 (766)
Q Consensus 443 ~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 522 (766)
.+.++.|||||+. ..||||+|||++|++++
T Consensus 232 ---------------------------------------------~~~~~~fSn~G~~-----~~~~di~APG~~i~s~~ 261 (357)
T 4h6x_A 232 ---------------------------------------------DGTPCHFSNWGGN-----NTKEGILAPGEEILGAQ 261 (357)
T ss_dssp ---------------------------------------------TSSBCTTCC---C-----TTTTEEEEECSSEEECC
T ss_pred ---------------------------------------------CCcccccccCCCC-----CCccceeecCCCeEecc
Confidence 1278899999974 45899999999999998
Q ss_pred CCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCCccccCCCCCC
Q 004242 523 PATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSV----HEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSD 598 (766)
Q Consensus 523 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~ 598 (766)
+.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 262 ~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~------------ 317 (357)
T 4h6x_A 262 PCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE------------ 317 (357)
T ss_dssp TTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------------------
T ss_pred CCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC------------
Confidence 6541 5778999999999999999999954 56899999999999999976432
Q ss_pred CCCCCcccccCCccCccccCC
Q 004242 599 TPLATAFAFGSGHVDPESASD 619 (766)
Q Consensus 599 ~~~~~~~~~G~G~id~~~Al~ 619 (766)
....+.+||+|+||+.+|++
T Consensus 318 -~~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 -VVEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp --------CTTCBCCHHHHHH
T ss_pred -CCCCcccceeEEecHHHHHH
Confidence 23455689999999999986
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=2e-51 Score=433.78 Aligned_cols=265 Identities=33% Similarity=0.407 Sum_probs=213.4
Q ss_pred ccCCccC--CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccc
Q 004242 123 FLGLESG--IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYE 200 (766)
Q Consensus 123 ~~g~~~~--~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~ 200 (766)
.|++..+ ..+|+.+..|+||+|||||||||++||+|.++ ++..++|.+.
T Consensus 12 ~w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~---------------------------~~~~~~~~~~-- 62 (280)
T 1dbi_A 12 QYGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK---------------------------VIKGYDFVDN-- 62 (280)
T ss_dssp CCTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT---------------------------EEEEEETTTT--
T ss_pred CCChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccC---------------------------cccceeccCC--
Confidence 3566554 57899988888999999999999999999653 2333333221
Q ss_pred cccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHH
Q 004242 201 SVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKA 279 (766)
Q Consensus 201 ~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 279 (766)
+ ..+.|..+|||||||||+|...+... +.||||+|+|+.+|+++..+ +..+++++||+||
T Consensus 63 ----~-------~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a 123 (280)
T 1dbi_A 63 ----D-------YDPMDLNNHGTHVAGIAAAETNNATG--------IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYA 123 (280)
T ss_dssp ----B-------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHH
T ss_pred ----C-------CCCCCCCCcHHHHHHHHhCcCCCCCc--------ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHH
Confidence 1 14578899999999999998544322 37999999999999998766 7889999999999
Q ss_pred HhCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEeCCC
Q 004242 280 VADGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKLGNG 359 (766)
Q Consensus 280 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~~~g 359 (766)
+++|++|||||||... ..+.+..++.++.++|+++|+||||+|.....++...+++|+|||++.
T Consensus 124 ~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~------------- 187 (280)
T 1dbi_A 124 ADSGAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQ------------- 187 (280)
T ss_dssp HHTTCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECT-------------
T ss_pred HHCCCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCC-------------
Confidence 9999999999999863 235677778889999999999999999877778888999999999642
Q ss_pred ceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCC
Q 004242 360 HSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKE 439 (766)
Q Consensus 360 ~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 439 (766)
T Consensus 188 -------------------------------------------------------------------------------- 187 (280)
T 1dbi_A 188 -------------------------------------------------------------------------------- 187 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEE
Q 004242 440 GEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNIL 519 (766)
Q Consensus 440 ~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~ 519 (766)
.+.++.||++||.. ||+|||++|+
T Consensus 188 ------------------------------------------------~~~~~~~S~~G~~~--------dv~ApG~~i~ 211 (280)
T 1dbi_A 188 ------------------------------------------------YDRLASFSNYGTWV--------DVVAPGVDIV 211 (280)
T ss_dssp ------------------------------------------------TSCBCTTBCCSTTC--------CEEEECSSEE
T ss_pred ------------------------------------------------CCCcCCCCCCCCCc--------eEEEecCCeE
Confidence 12678999999864 9999999999
Q ss_pred eecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCC
Q 004242 520 AAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDT 599 (766)
Q Consensus 520 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~ 599 (766)
++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++..
T Consensus 212 s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~-------------- 262 (280)
T 1dbi_A 212 STITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISG-------------- 262 (280)
T ss_dssp EEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTT--------------
T ss_pred eecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCC--------------
Confidence 998654 899999999999999999999987 899999999999999997631
Q ss_pred CCCCcccccCCccCccccCC
Q 004242 600 PLATAFAFGSGHVDPESASD 619 (766)
Q Consensus 600 ~~~~~~~~G~G~id~~~Al~ 619 (766)
....||+|+||+.+|++
T Consensus 263 ---~~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 263 ---TGTYFKYGRINSYNAVT 279 (280)
T ss_dssp ---BTTTBSSEECCHHHHHT
T ss_pred ---CCCcccCCEECHHHHhc
Confidence 12479999999999986
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.1e-51 Score=434.57 Aligned_cols=262 Identities=33% Similarity=0.453 Sum_probs=217.4
Q ss_pred cCCccC--CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCcccccccccccccccc
Q 004242 124 LGLESG--IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYES 201 (766)
Q Consensus 124 ~g~~~~--~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~ 201 (766)
|++..+ ..+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~-----------------------------~~g~~~~~~--- 53 (274)
T 1r0r_E 6 YGIPLIKADKVQAQGFKGANVKVAVLDTGIQASHPDLNV-----------------------------VGGASFVAG--- 53 (274)
T ss_dssp THHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCE-----------------------------EEEEECSTT---
T ss_pred CchhhcCCHHHHhcCCCCCCCEEEEEcCCCCCCCHhHcC-----------------------------CCCccccCC---
Confidence 555443 5789999999999999999999999999931 112223221
Q ss_pred ccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHH
Q 004242 202 VVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAV 280 (766)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~ 280 (766)
+ ..+.|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..+++++||+||+
T Consensus 54 ---~-------~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~ 114 (274)
T 1r0r_E 54 ---E-------AYNTDGNGHGTHVAGTVAALDN-T---TG-----VLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWAT 114 (274)
T ss_dssp ---C-------CTTCCSSSHHHHHHHHHHCCSS-S---SB-----CCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHH
T ss_pred ---C-------CCCCCCCCCHHHHHHHHHccCC-C---Cc-----eEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHH
Confidence 1 1246789999999999999731 1 12 37999999999999998776 78889999999999
Q ss_pred hCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCC----CCcCCCCCceEEEecccCCcceeEEEEe
Q 004242 281 ADGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSI----STVDNTAPWIMTVAASYTDRSFPAIVKL 356 (766)
Q Consensus 281 ~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~~itVga~~~~~~~~~~~~~ 356 (766)
+++++|||||||.... .+.+..++.++.++|+++|+||||+|... ..++...|++|+||+++.
T Consensus 115 ~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---------- 181 (274)
T 1r0r_E 115 TNGMDVINMSLGGASG---STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS---------- 181 (274)
T ss_dssp HTTCSEEEECEEBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT----------
T ss_pred HcCCCEEEeCCCCCCC---cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC----------
Confidence 9999999999998643 35677788889999999999999999763 355678899999999642
Q ss_pred CCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecC
Q 004242 357 GNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNS 436 (766)
Q Consensus 357 ~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~ 436 (766)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCC
Q 004242 437 DKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGV 516 (766)
Q Consensus 437 ~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 516 (766)
.+.++.||++||. |||+|||.
T Consensus 182 ---------------------------------------------------~~~~~~~S~~G~~--------~di~APG~ 202 (274)
T 1r0r_E 182 ---------------------------------------------------NSNRASFSSVGAE--------LEVMAPGA 202 (274)
T ss_dssp ---------------------------------------------------TSCBCTTCCCSTT--------EEEEEECS
T ss_pred ---------------------------------------------------CCCcCccCCCCCC--------ceEEeCCC
Confidence 1267899999985 49999999
Q ss_pred cEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCC
Q 004242 517 NILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGS 596 (766)
Q Consensus 517 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~ 596 (766)
+|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++
T Consensus 203 ~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~------------- 256 (274)
T 1r0r_E 203 GVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYL------------- 256 (274)
T ss_dssp SEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCC-------------
T ss_pred CeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCccc-------------
Confidence 999998754 899999999999999999999999999999999999999999964
Q ss_pred CCCCCCCcccccCCccCccccCC
Q 004242 597 SDTPLATAFAFGSGHVDPESASD 619 (766)
Q Consensus 597 ~~~~~~~~~~~G~G~id~~~Al~ 619 (766)
.++..||+|+||+.+|++
T Consensus 257 -----g~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 257 -----GSSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp -----SCHHHHTTCBCCHHHHTC
T ss_pred -----CCCCCcccCccCHHHHhC
Confidence 245689999999999985
No 13
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=1.6e-51 Score=431.71 Aligned_cols=261 Identities=34% Similarity=0.483 Sum_probs=218.8
Q ss_pred cCCccC--CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCcccccccccccccccc
Q 004242 124 LGLESG--IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYES 201 (766)
Q Consensus 124 ~g~~~~--~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~ 201 (766)
|++..+ ..+|..+++|+||+|+|||||| .+||+|+. ...++|..+
T Consensus 6 W~l~~i~~~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~-----------------------------~~~~~~~~~--- 52 (269)
T 1gci_A 6 WGISRVQAPAAHNRGLTGSGVKVAVLDTGI-STHPDLNI-----------------------------RGGASFVPG--- 52 (269)
T ss_dssp HHHHHTTHHHHHHTTCSCTTCEEEEEESCC-CCCTTCCE-----------------------------EEEEECSTT---
T ss_pred cChhhcCcHHHHhcCCCCCCCEEEEECCCC-CCCHhhcc-----------------------------cCCcccCCC---
Confidence 555443 5789999999999999999999 89999931 112223211
Q ss_pred ccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHH
Q 004242 202 VVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAV 280 (766)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~ 280 (766)
+ ..+.|..||||||||||+|.. +. .| +.||||+|+|+.+|+++..+ +..+++++||+||+
T Consensus 53 ---~-------~~~~d~~gHGT~vAgiia~~~-~~---~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~ 113 (269)
T 1gci_A 53 ---E-------PSTQDGNGHGTHVAGTIAALN-NS---IG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAG 113 (269)
T ss_dssp ---C-------CSCSCSSSHHHHHHHHHHCCC-SS---SB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHH
T ss_pred ---C-------CCCCCCCCChHHHHHHHhcCc-CC---CC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHH
Confidence 1 135678999999999999973 11 12 37999999999999998766 78889999999999
Q ss_pred hCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEeCCCc
Q 004242 281 ADGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKLGNGH 360 (766)
Q Consensus 281 ~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~~~g~ 360 (766)
+++++|||||||.... ...+..++.++.++|+++|+||||+|.....++...+++|+|||++.
T Consensus 114 ~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~-------------- 176 (269)
T 1gci_A 114 NNGMHVANLSLGSPSP---SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQ-------------- 176 (269)
T ss_dssp HTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECT--------------
T ss_pred HCCCeEEEeCCCCCCC---CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecC--------------
Confidence 9999999999998643 35677777889999999999999999888888889999999999642
Q ss_pred eEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCc
Q 004242 361 SFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEG 440 (766)
Q Consensus 361 ~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 440 (766)
T Consensus 177 -------------------------------------------------------------------------------- 176 (269)
T 1gci_A 177 -------------------------------------------------------------------------------- 176 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEe
Q 004242 441 EELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILA 520 (766)
Q Consensus 441 ~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~s 520 (766)
.+.++.||++||.. ||+|||++|++
T Consensus 177 -----------------------------------------------~~~~~~~S~~G~~~--------di~APG~~i~s 201 (269)
T 1gci_A 177 -----------------------------------------------NNNRASFSQYGAGL--------DIVAPGVNVQS 201 (269)
T ss_dssp -----------------------------------------------TSCBCTTCCCSTTE--------EEEEECSSEEE
T ss_pred -----------------------------------------------CCCCCCCCCCCCCc--------ceEecCCCeEe
Confidence 12678999999965 99999999999
Q ss_pred ecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCC
Q 004242 521 AWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTP 600 (766)
Q Consensus 521 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~ 600 (766)
+++.. .|..++|||||||||||++|||+|++|+|++.|||++|++||+++.
T Consensus 202 ~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------- 252 (269)
T 1gci_A 202 TYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------- 252 (269)
T ss_dssp EETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS----------------
T ss_pred ecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC----------------
Confidence 98754 8999999999999999999999999999999999999999999652
Q ss_pred CCCcccccCCccCccccCC
Q 004242 601 LATAFAFGSGHVDPESASD 619 (766)
Q Consensus 601 ~~~~~~~G~G~id~~~Al~ 619 (766)
.+..||+|+||+.+|++
T Consensus 253 --~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 --STNLYGSGLVNAEAATR 269 (269)
T ss_dssp --CHHHHTTCBCCHHHHTC
T ss_pred --CCCCcccCccCHHHHcC
Confidence 45689999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2.4e-51 Score=433.39 Aligned_cols=264 Identities=33% Similarity=0.473 Sum_probs=218.3
Q ss_pred cCCccC--CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCcccccccccccccccc
Q 004242 124 LGLESG--IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYES 201 (766)
Q Consensus 124 ~g~~~~--~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~ 201 (766)
|++..+ ..+|..+++|+||+|||||||||++||+|+.. +.+.|..+
T Consensus 6 w~l~~i~~~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~-----------------------------~g~~~~~~--- 53 (281)
T 1to2_E 6 YGVSQIKAPALHSQGYTGSNVKVAVIDSGIDSSHPDLKVA-----------------------------GGASMVPS--- 53 (281)
T ss_dssp HHHHHTTHHHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE-----------------------------EEEECCTT---
T ss_pred cchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCCHHHcCc-----------------------------CCccccCC---
Confidence 555443 56899999999999999999999999999421 11222211
Q ss_pred ccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHH
Q 004242 202 VVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAV 280 (766)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~ 280 (766)
+. ....|..||||||||||+|..+ + .| +.||||+|+|+.+|+++..+ +..++++++|+|++
T Consensus 54 ---~~------~~~~d~~gHGT~vAgiia~~~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~ 115 (281)
T 1to2_E 54 ---ET------NPFQDNNSHGTHVAGTVAALNN-S---IG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAI 115 (281)
T ss_dssp ---CC------CTTCCSSSHHHHHHHHHHCCSS-S---SS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHH
T ss_pred ---CC------CCCCCCCCcHHHHHHHHhccCC-C---Cc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHH
Confidence 10 1236789999999999999731 1 12 37999999999999998766 77889999999999
Q ss_pred hCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCC----CCcCCCCCceEEEecccCCcceeEEEEe
Q 004242 281 ADGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSI----STVDNTAPWIMTVAASYTDRSFPAIVKL 356 (766)
Q Consensus 281 ~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~~itVga~~~~~~~~~~~~~ 356 (766)
+++++|||||||.... .+.+..++.++.++|+++|+||||+|... ..++...|++|+|||++.
T Consensus 116 ~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~---------- 182 (281)
T 1to2_E 116 ANNMDVINMSLGGPSG---SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS---------- 182 (281)
T ss_dssp HTTCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT----------
T ss_pred HCCCcEEEECCcCCCC---CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC----------
Confidence 9999999999998643 45677788889999999999999999763 356778899999999642
Q ss_pred CCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecC
Q 004242 357 GNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNS 436 (766)
Q Consensus 357 ~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~ 436 (766)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCC
Q 004242 437 DKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGV 516 (766)
Q Consensus 437 ~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 516 (766)
.+.++.||++||.. ||+|||.
T Consensus 183 ---------------------------------------------------~~~~~~fS~~G~~~--------di~APG~ 203 (281)
T 1to2_E 183 ---------------------------------------------------SNQRASFSSVGPEL--------DVMAPGV 203 (281)
T ss_dssp ---------------------------------------------------TSCBCTTCCCSTTC--------CEEEECS
T ss_pred ---------------------------------------------------CCCcCCcCCCCCCc--------eEEecCC
Confidence 12678999999964 9999999
Q ss_pred cEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCC
Q 004242 517 NILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGS 596 (766)
Q Consensus 517 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~ 596 (766)
+|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+++
T Consensus 204 ~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~------------- 257 (281)
T 1to2_E 204 SIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKL------------- 257 (281)
T ss_dssp SEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCC-------------
T ss_pred CeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCccc-------------
Confidence 999998754 899999999999999999999999999999999999999999964
Q ss_pred CCCCCCCcccccCCccCccccCCC
Q 004242 597 SDTPLATAFAFGSGHVDPESASDP 620 (766)
Q Consensus 597 ~~~~~~~~~~~G~G~id~~~Al~~ 620 (766)
.+++.||||+||+.+|+++
T Consensus 258 -----g~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 258 -----GDSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp -----SCHHHHTTCBCCHHHHTSS
T ss_pred -----CCCCCcccceecHHHHhhh
Confidence 2456899999999999874
No 15
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=3.2e-51 Score=441.59 Aligned_cols=270 Identities=29% Similarity=0.397 Sum_probs=217.2
Q ss_pred ccCCccC--CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccc
Q 004242 123 FLGLESG--IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYE 200 (766)
Q Consensus 123 ~~g~~~~--~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~ 200 (766)
.|++..+ ..+|..+++|+||+|||||||||++||+|.++ ++++++|..++.
T Consensus 22 ~w~l~~i~~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~~~ 74 (327)
T 2x8j_A 22 PMGVEIVEAPAVWRASAKGAGQIIGVIDTGCQVDHPDLAER---------------------------IIGGVNLTTDYG 74 (327)
T ss_dssp CHHHHHTTHHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG---------------------------EEEEEECSSGGG
T ss_pred CcchhhcChHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc---------------------------ccCCccccCCCC
Confidence 4555443 57899999999999999999999999999653 333344443221
Q ss_pred cccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHH
Q 004242 201 SVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKA 279 (766)
Q Consensus 201 ~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 279 (766)
. +...+.|..||||||||||+|.. ++. | +.||||+|+|+.+|+++..+ +..+++++||+||
T Consensus 75 ~---------~~~~~~d~~gHGT~VAgiia~~~-~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a 136 (327)
T 2x8j_A 75 G---------DETNFSDNNGHGTHVAGTVAAAE-TGS---G-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYA 136 (327)
T ss_dssp G---------CTTCCCCSSSHHHHHHHHHHCCC-CSS---B-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHH
T ss_pred C---------CCCCCCCCCCchHHHHHHHhccC-CCC---C-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHH
Confidence 0 11135688999999999999983 211 1 37999999999999998776 7888999999999
Q ss_pred Hh------CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCC-----CCcCCCCCceEEEecccCCc
Q 004242 280 VA------DGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSI-----STVDNTAPWIMTVAASYTDR 348 (766)
Q Consensus 280 ~~------~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~~itVga~~~~~ 348 (766)
++ .+++|||||||.... .+.+..++..+.++|++||+||||+|... ..++...+++|+|||++.+
T Consensus 137 ~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~- 212 (327)
T 2x8j_A 137 VDWRGPKGEQMRIITMSLGGPTD---SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD- 212 (327)
T ss_dssp HHCCCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT-
T ss_pred HhhcccccCCceEEEECCCcCCC---CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC-
Confidence 99 899999999998642 35677778889999999999999999752 3567788999999996421
Q ss_pred ceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCc
Q 004242 349 SFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGG 428 (766)
Q Consensus 349 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga 428 (766)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCccc
Q 004242 429 AGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIK 508 (766)
Q Consensus 429 ~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lK 508 (766)
+.++.||++||.
T Consensus 213 ------------------------------------------------------------~~~~~fS~~G~~-------- 224 (327)
T 2x8j_A 213 ------------------------------------------------------------LRLSDFTNTNEE-------- 224 (327)
T ss_dssp ------------------------------------------------------------CCBSCC---CCC--------
T ss_pred ------------------------------------------------------------CCCCCccCCCCC--------
Confidence 267899999985
Q ss_pred CcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhh-----CCCCCHHHHHHHHHhccccC
Q 004242 509 PDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSV-----HEDWSTAAIKSALMTTAYTL 583 (766)
Q Consensus 509 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~~s~~~ik~~L~~TA~~~ 583 (766)
|||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+||++|++||+++
T Consensus 225 ~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~ 291 (327)
T 2x8j_A 225 IDIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPI 291 (327)
T ss_dssp CSEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECC
T ss_pred ceEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccC
Confidence 49999999999998654 7999999999999999999999999 99999999999999999975
Q ss_pred CCCCCccccCCCCCCCCCCCcccccCCccCccccCC
Q 004242 584 NNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASD 619 (766)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~ 619 (766)
. .++..+|+|+||+.+|++
T Consensus 292 g-----------------~~~~~~G~G~vd~~~A~~ 310 (327)
T 2x8j_A 292 G-----------------FTAQAEGNGFLTLDLVER 310 (327)
T ss_dssp S-----------------SCHHHHTTCEECTTHHHH
T ss_pred C-----------------CCCCceeeeEECHHHHHH
Confidence 2 245689999999999987
No 16
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1.6e-50 Score=426.79 Aligned_cols=263 Identities=28% Similarity=0.423 Sum_probs=218.5
Q ss_pred cCCccC--CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCcccccccccccccccc
Q 004242 124 LGLESG--IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYES 201 (766)
Q Consensus 124 ~g~~~~--~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~ 201 (766)
|+++.+ ..+|+.. +|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 13 w~l~~i~~~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~--- 61 (279)
T 1thm_A 13 YGPQKIQAPQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK---------------------------VVGGWDFVDN--- 61 (279)
T ss_dssp CHHHHTTHHHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEETTTT---
T ss_pred cChhhCChHHHHhcC-CCCCCEEEEEccCCCCCCcchhcC---------------------------ccccccccCC---
Confidence 444433 5688887 699999999999999999999653 3333333321
Q ss_pred ccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHH
Q 004242 202 VVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAV 280 (766)
Q Consensus 202 ~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~ 280 (766)
+ ..+.|..||||||||||+|...++.. +.||||+|+|+.+|+++..+ ++.+++++||+||+
T Consensus 62 ---~-------~~~~d~~gHGT~vAgiia~~~~n~~g--------~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~ 123 (279)
T 1thm_A 62 ---D-------STPQNGNGHGTHCAGIAAAVTNNSTG--------IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAA 123 (279)
T ss_dssp ---B-------SCCCCSSSHHHHHHHHHHCCCSSSSS--------CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHH
T ss_pred ---C-------CCCCCCCCcHHHHHHHHhCccCCCCc--------cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHH
Confidence 1 14578899999999999998644322 37999999999999998766 78889999999999
Q ss_pred hCCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEeCCCc
Q 004242 281 ADGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKLGNGH 360 (766)
Q Consensus 281 ~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~~~g~ 360 (766)
++|++|||||||.... .+.+..++.++.++|+++|+||||+|.....++...+++|+|||++.
T Consensus 124 ~~g~~Vin~S~G~~~~---~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~-------------- 186 (279)
T 1thm_A 124 DQGAKVISLSLGGTVG---NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQ-------------- 186 (279)
T ss_dssp HTTCSEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECT--------------
T ss_pred HCCCCEEEEecCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCC--------------
Confidence 9999999999998643 35677778889999999999999999887788888999999999642
Q ss_pred eEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCc
Q 004242 361 SFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEG 440 (766)
Q Consensus 361 ~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 440 (766)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 1thm_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEe
Q 004242 441 EELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILA 520 (766)
Q Consensus 441 ~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~s 520 (766)
.+.++.||++||.. ||+|||++|++
T Consensus 187 -----------------------------------------------~~~~~~fS~~G~~~--------dv~APG~~i~s 211 (279)
T 1thm_A 187 -----------------------------------------------NDNKSSFSTYGSWV--------DVAAPGSSIYS 211 (279)
T ss_dssp -----------------------------------------------TSCBCTTCCCCTTC--------CEEEECSSEEE
T ss_pred -----------------------------------------------CCCcCCcCCCCCce--------EEEEcCCCeEE
Confidence 12678999999864 99999999999
Q ss_pred ecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCC
Q 004242 521 AWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTP 600 (766)
Q Consensus 521 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~ 600 (766)
+++.. .|..++|||||||||||++||| ++|.+++.+||++|++||+++...
T Consensus 212 ~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~-------------- 262 (279)
T 1thm_A 212 TYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGT-------------- 262 (279)
T ss_dssp EETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTB--------------
T ss_pred EeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCC--------------
Confidence 98754 8999999999999999999999 579999999999999999976421
Q ss_pred CCCcccccCCccCccccCC
Q 004242 601 LATAFAFGSGHVDPESASD 619 (766)
Q Consensus 601 ~~~~~~~G~G~id~~~Al~ 619 (766)
...||+|+||+.+|++
T Consensus 263 ---~~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 263 ---GTYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ---TTTBSSEECCHHHHHH
T ss_pred ---CccccCCeeCHHHHhc
Confidence 1379999999999975
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=7.4e-51 Score=430.80 Aligned_cols=263 Identities=24% Similarity=0.249 Sum_probs=209.6
Q ss_pred CCC-CCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccCCCCC
Q 004242 137 NLA-KDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVDYRSP 215 (766)
Q Consensus 137 ~~G-~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~~~~~ 215 (766)
.+| +||+|||||||||++||+|.++. +.+ +.+... . .....
T Consensus 4 l~G~~gV~VaViDtGid~~Hpdl~g~~--------------------------~~~-~~~~~~------~-----~~~~d 45 (282)
T 3zxy_A 4 LKGDHNIRVAILDGPVDIAHPCFQGAD--------------------------LTV-LPTLAP------T-----AARSD 45 (282)
T ss_dssp CCCCTTSEEEEEESCCCTTSGGGTTCE--------------------------EEE-CCCSSC------C-----CCCTT
T ss_pred CcCCCCCEEEEEcCCCCCCChhHCCCe--------------------------eec-CcCCCC------C-----CCCCC
Confidence 568 79999999999999999997641 000 111100 0 00122
Q ss_pred CCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC--CCHHHHHHHHHHHHhCCCcEEEeccCC
Q 004242 216 RDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG--CSSSDILAAIDKAVADGVDVLSLSLGG 293 (766)
Q Consensus 216 ~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVIn~SlG~ 293 (766)
.|..||||||||||+|+..+ .+.||||+|+|+.+|++.+.+ ....++++||+||++++++|||||||.
T Consensus 46 ~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~ 115 (282)
T 3zxy_A 46 GFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGE 115 (282)
T ss_dssp CHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCE
T ss_pred CCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCcc
Confidence 34578999999999997422 237999999999999986543 677889999999999999999999997
Q ss_pred CCC-CCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEeCCCceEeeeeeccCCC
Q 004242 294 SSR-PYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGKG 372 (766)
Q Consensus 294 ~~~-~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 372 (766)
... ......+..++..+.++|+++|+||||+|......+...|++|+|||++.
T Consensus 116 ~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~-------------------------- 169 (282)
T 3zxy_A 116 LTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDD-------------------------- 169 (282)
T ss_dssp EESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECT--------------------------
T ss_pred ccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcC--------------------------
Confidence 543 23445677788889999999999999999888788889999999999642
Q ss_pred CceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccccccCccccE
Q 004242 373 SKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLPA 452 (766)
Q Consensus 373 ~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~ 452 (766)
T Consensus 170 -------------------------------------------------------------------------------- 169 (282)
T 3zxy_A 170 -------------------------------------------------------------------------------- 169 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCCCCCCCC
Q 004242 453 ATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATTSPSMLK 532 (766)
Q Consensus 453 ~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~ 532 (766)
.+.++.||+||+. ..||||+|||.+|+++++.+
T Consensus 170 -----------------------------------~~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~~------- 202 (282)
T 3zxy_A 170 -----------------------------------HGHPLDFSNWGST-----YEQQGILAPGEDILGAKPGG------- 202 (282)
T ss_dssp -----------------------------------TSCBCSSSCCCHH-----HHHHEEEEECSSEEEECTTS-------
T ss_pred -----------------------------------CCccccccCCCCC-----ccccceeccCcceeeecCCC-------
Confidence 1267889999874 46889999999999998765
Q ss_pred CCccccceEEeecccchhhhhhhHHHHHHhhC----CCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCccccc
Q 004242 533 SDDRRVLFNIISGTSMSCPHVSGLAALLKSVH----EDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFG 608 (766)
Q Consensus 533 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~----P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G 608 (766)
.|..++|||||||||||++|||++++ |.++|++||++|++||++++.. .+.....+|
T Consensus 203 ------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~-------------~~~~~~~~G 263 (282)
T 3zxy_A 203 ------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD-------------APEQARRCL 263 (282)
T ss_dssp ------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC--------------------CGGGT
T ss_pred ------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC-------------CCCccCcee
Confidence 79999999999999999999999875 7899999999999999976432 344566899
Q ss_pred CCccCccccCC
Q 004242 609 SGHVDPESASD 619 (766)
Q Consensus 609 ~G~id~~~Al~ 619 (766)
+|+||+.+|++
T Consensus 264 ~G~ln~~~A~~ 274 (282)
T 3zxy_A 264 AGRLNVSGAFT 274 (282)
T ss_dssp TCBCCHHHHHH
T ss_pred eeEeCHHHHHH
Confidence 99999999986
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=2.4e-49 Score=425.18 Aligned_cols=289 Identities=28% Similarity=0.356 Sum_probs=225.3
Q ss_pred ccCCcc--CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccc
Q 004242 123 FLGLES--GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYE 200 (766)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~ 200 (766)
.|+++. ...+|..+++|+||+|||||||||++||+|.++ +...++|.....
T Consensus 7 ~W~l~~i~~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~---------------------------~~~~~~~~~~~~ 59 (310)
T 2ixt_A 7 PWGIKAIYNNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN---------------------------VEQCKDFTGATT 59 (310)
T ss_dssp CHHHHHHHTCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT---------------------------EEEEEESSSSSS
T ss_pred CCchhhcCchhhhhccCCCCCcEEEEEecCCCCCCHHHhhc---------------------------ccccccccCCCC
Confidence 355543 378999999999999999999999999999653 222333332210
Q ss_pred cccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHH
Q 004242 201 SVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKA 279 (766)
Q Consensus 201 ~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a 279 (766)
.......|..||||||||||+|....+ ...+.||||+|+|+.+|++++.+ +..+++++||+||
T Consensus 60 ---------~~~~~~~d~~gHGT~vAgiia~~~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a 123 (310)
T 2ixt_A 60 ---------PINNSCTDRNGHGTHVAGTALADGGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHA 123 (310)
T ss_dssp ---------CEETCCCCSSSHHHHHHHHHHCBCCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCCCHHHHHHHHhccCCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHH
Confidence 011235678999999999999985221 11237999999999999998776 6888999999999
Q ss_pred HhCCC-----cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCC--CCCcCCCCCceEEEecccCCcceeE
Q 004242 280 VADGV-----DVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPS--ISTVDNTAPWIMTVAASYTDRSFPA 352 (766)
Q Consensus 280 ~~~g~-----dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~--~~~~~~~~p~~itVga~~~~~~~~~ 352 (766)
+++++ +|||||||.... ...+..++.++.++|++||+||||+|.. ...++...|++|+|||++....
T Consensus 124 ~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~--- 197 (310)
T 2ixt_A 124 ADQATATGTKTIISMSLGSSAN---NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ--- 197 (310)
T ss_dssp HHHHHHHTCCEEEEECCCBSSC---CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE---
T ss_pred HHhhhccCCCeEEEEcCCCCCC---CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc---
Confidence 99988 999999998643 4567777788999999999999999976 3456778899999999641000
Q ss_pred EEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEE
Q 004242 353 IVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGML 432 (766)
Q Consensus 353 ~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i 432 (766)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCC----CCccc
Q 004242 433 LLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVG----HDVIK 508 (766)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~----~~~lK 508 (766)
.....++.||++||.... ..+.|
T Consensus 198 -----------------------------------------------------~g~~~~~~~S~~G~~~~~g~~~~~~~~ 224 (310)
T 2ixt_A 198 -----------------------------------------------------NGTYRVADYSSRGYISTAGDYVIQEGD 224 (310)
T ss_dssp -----------------------------------------------------TTEEEECTTSCCCCTTTTTSSSCCTTC
T ss_pred -----------------------------------------------------CCCeeeccccCCCCccCCccccccCCC
Confidence 000157889999995321 12359
Q ss_pred CcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCC
Q 004242 509 PDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNS 588 (766)
Q Consensus 509 PDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~ 588 (766)
|||+|||.+|+++++.. .|..++|||||||||||++|||+|++|+|++.+||++|++||++++..+.
T Consensus 225 ~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~ 291 (310)
T 2ixt_A 225 IEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG 291 (310)
T ss_dssp CCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS
T ss_pred eeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC
Confidence 99999999999998654 79999999999999999999999999999999999999999998764321
Q ss_pred ccccCCCCCCCCCCCcccccCCccCc
Q 004242 589 PIADVGGSSDTPLATAFAFGSGHVDP 614 (766)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~G~G~id~ 614 (766)
+...+..+..+|||++|+
T Consensus 292 --------~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 292 --------YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp --------TTCCSSSBTTTBTCBCCC
T ss_pred --------cccccCCccccccceeec
Confidence 111456778999999986
No 19
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=2e-50 Score=433.01 Aligned_cols=270 Identities=26% Similarity=0.286 Sum_probs=217.8
Q ss_pred CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccc
Q 004242 130 IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINET 209 (766)
Q Consensus 130 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 209 (766)
+++|+....++||+|||||||||++||+|.++. +.+..+|..+ +.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~--------------------------~~~~~~~~~~------~~--- 55 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGAD--------------------------LTRLPSLVSG------EA--- 55 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCE--------------------------EEECC----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCc--------------------------ccCCCcccCC------CC---
Confidence 468999887799999999999999999997641 1111222211 11
Q ss_pred cCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC--CCHHHHHHHHHHHHhCCCcEE
Q 004242 210 VDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG--CSSSDILAAIDKAVADGVDVL 287 (766)
Q Consensus 210 ~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~a~~~g~dVI 287 (766)
....|..||||||||||+|+..+ .+.||||+|+|+.+|++.+.+ ....++++||+||++++++||
T Consensus 56 ---~~~~d~~gHGThVAGiiag~~~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi 122 (306)
T 4h6w_A 56 ---NANGSMSTHGTHVASIIFGQHDS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANII 122 (306)
T ss_dssp ------CCCCHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEE
T ss_pred ---CCCCCCCCchHHHHHHHHccccC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceee
Confidence 12356789999999999997422 247999999999999996543 677889999999999999999
Q ss_pred EeccCCCCC-CCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCceEEEecccCCcceeEEEEeCCCceEeeee
Q 004242 288 SLSLGGSSR-PYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGSS 366 (766)
Q Consensus 288 n~SlG~~~~-~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~~ 366 (766)
|+|||.... ......+..++..+.++|+++|+||||+|.....++...+++|+|||++..
T Consensus 123 ~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~------------------- 183 (306)
T 4h6w_A 123 NVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ------------------- 183 (306)
T ss_dssp EECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT-------------------
T ss_pred eccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC-------------------
Confidence 999996543 344556777888999999999999999998877888889999999996421
Q ss_pred eccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCccccccc
Q 004242 367 LYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIAD 446 (766)
Q Consensus 367 ~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 446 (766)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCCC
Q 004242 447 AHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPATT 526 (766)
Q Consensus 447 ~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~~ 526 (766)
+.++.||++|+. ..||||+|||.+|+++++.+
T Consensus 184 ------------------------------------------~~~~~~s~~g~~-----~~~~di~APG~~i~s~~~~~- 215 (306)
T 4h6w_A 184 ------------------------------------------GKPVDFSNWGDA-----YQKQGILAPGKDILGAKPNG- 215 (306)
T ss_dssp ------------------------------------------SCBCSSSCBCHH-----HHHHEEEEECSSEEEECTTS-
T ss_pred ------------------------------------------CCccccccccCC-----cCcceeecCCcCcccccCCC-
Confidence 267789999974 46899999999999998765
Q ss_pred CCCCCCCCccccceEEeecccchhhhhhhHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCC
Q 004242 527 SPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSV----HEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLA 602 (766)
Q Consensus 527 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~ 602 (766)
.|..++|||||||||||++|||+++ +|.|+|++||++|++||+++... ...
T Consensus 216 ------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~-------------~~~ 270 (306)
T 4h6w_A 216 ------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPK-------------DTD 270 (306)
T ss_dssp ------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTT-------------TCS
T ss_pred ------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCC-------------CCC
Confidence 8999999999999999999999865 69999999999999999987432 223
Q ss_pred CcccccCCccCccccCC
Q 004242 603 TAFAFGSGHVDPESASD 619 (766)
Q Consensus 603 ~~~~~G~G~id~~~Al~ 619 (766)
....||+|+||+.+|++
T Consensus 271 ~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 271 DQSRCLMGKLNILDAIE 287 (306)
T ss_dssp CGGGGTTCBCCHHHHHH
T ss_pred CCCCcceeecCHHHHHH
Confidence 44579999999999987
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=3.7e-50 Score=432.71 Aligned_cols=270 Identities=30% Similarity=0.454 Sum_probs=219.6
Q ss_pred ccCCcc--CCCccccCCCCC--CcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccc
Q 004242 123 FLGLES--GIGLWDATNLAK--DVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKG 198 (766)
Q Consensus 123 ~~g~~~--~~~~~~~~~~G~--gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g 198 (766)
.|+++. ...+|..+ +|+ ||+|||||||||++||+|.++ +...++|..+
T Consensus 9 ~W~l~~i~~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~---------------------------~~~~~~~~~~ 60 (320)
T 2z30_A 9 PWGIERVKAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN---------------------------IAWCVSTLRG 60 (320)
T ss_dssp CHHHHHTTCGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG---------------------------EEEEEECGGG
T ss_pred CCChhhcChHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc---------------------------cccCccccCC
Confidence 355544 36789988 899 999999999999999999753 2222233221
Q ss_pred cccccCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHH
Q 004242 199 YESVVGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAID 277 (766)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~ 277 (766)
... . ......|..||||||||||+|.. ++ .| +.||||+|+|+.+|+++..+ +..+++++||+
T Consensus 61 ~~~--~------~~~~~~d~~gHGT~vAgiia~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~ 123 (320)
T 2z30_A 61 KVS--T------KLRDCADQNGHGTHVIGTIAALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIE 123 (320)
T ss_dssp CCB--C------CHHHHBCSSSHHHHHHHHHHCCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHH
T ss_pred ccC--C------CCCCCCCCCCCHHHHHHHHHccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHH
Confidence 100 0 00123678999999999999972 21 12 37999999999999998776 77889999999
Q ss_pred HHHhC--------------------CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCCcCCCCCc
Q 004242 278 KAVAD--------------------GVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSISTVDNTAPW 337 (766)
Q Consensus 278 ~a~~~--------------------g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~ 337 (766)
||+++ +++|||||||.... ...+..++.++.++|++||+||||+|.....++...|+
T Consensus 124 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~ 200 (320)
T 2z30_A 124 QAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPE 200 (320)
T ss_dssp HHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTT
T ss_pred HHHhCcccccccccccccccccccCCceEEEecCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCC
Confidence 99987 99999999998643 35567777789999999999999999887788889999
Q ss_pred eEEEecccCCcceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchh
Q 004242 338 IMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRT 417 (766)
Q Consensus 338 ~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~ 417 (766)
+|+|||++.
T Consensus 201 vi~Vga~~~----------------------------------------------------------------------- 209 (320)
T 2z30_A 201 VIAVGAIDS----------------------------------------------------------------------- 209 (320)
T ss_dssp EEEEEEECT-----------------------------------------------------------------------
T ss_pred eEEEEeeCC-----------------------------------------------------------------------
Confidence 999999642
Q ss_pred hhhHHHHhcCceEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCC
Q 004242 418 GKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSR 497 (766)
Q Consensus 418 ~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~ 497 (766)
.+.++.||++
T Consensus 210 ----------------------------------------------------------------------~~~~~~~S~~ 219 (320)
T 2z30_A 210 ----------------------------------------------------------------------NDNIASFSNR 219 (320)
T ss_dssp ----------------------------------------------------------------------TSCBCTTSCS
T ss_pred ----------------------------------------------------------------------CCCcCcccCC
Confidence 1267899999
Q ss_pred CCCCCCCCcccCcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhC-------------
Q 004242 498 GPSLVGHDVIKPDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVH------------- 564 (766)
Q Consensus 498 Gp~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~------------- 564 (766)
|| +|+|||.+|+++++.. .|..++|||||||||||++|||+|++
T Consensus 220 g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~ 276 (320)
T 2z30_A 220 QP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTF 276 (320)
T ss_dssp SC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCT
T ss_pred CC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccC
Confidence 97 7899999999998754 89999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccccCCCCCCccccCCCCCCCCCCCcccccCCccCccccCC
Q 004242 565 EDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASD 619 (766)
Q Consensus 565 P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~ 619 (766)
|+|++.+||++|++||+++. .+..+..||+|+||+.+|++
T Consensus 277 p~lt~~~v~~~L~~ta~~~~---------------~~g~~~~~G~G~vd~~~A~~ 316 (320)
T 2z30_A 277 DDISKNTVRGILHITADDLG---------------PTGWDADYGYGVVRAALAVQ 316 (320)
T ss_dssp TCCSTTSHHHHHHHHSBCCS---------------SSSSBTTTBTCBCCHHHHHH
T ss_pred CCCCHHHHHHHHHhhCccCC---------------CCCCCCCcCCceeCHHHHHH
Confidence 99999999999999999763 23345689999999999986
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=1.1e-49 Score=434.45 Aligned_cols=271 Identities=19% Similarity=0.132 Sum_probs=216.5
Q ss_pred CCCccccCCCCC--CcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCcc
Q 004242 129 GIGLWDATNLAK--DVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRI 206 (766)
Q Consensus 129 ~~~~~~~~~~G~--gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~ 206 (766)
...+|.. ++|+ ||+||||||||| +||+|.++ ++..++|..+. .
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~---------------------------~~~~~~~~~~~-----~- 76 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS---------------------------EFAKFSFTQDG-----S- 76 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC---------------------------EEEEEECBTTC-----C-
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC---------------------------cccCCcccCCC-----C-
Confidence 3678988 8999 999999999999 99999653 22223333210 0
Q ss_pred ccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHHHHHHhC----
Q 004242 207 NETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVAD---- 282 (766)
Q Consensus 207 ~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~---- 282 (766)
..+...+.|..||||||||||+|. .| +.||||+|+|+.+|++++.+.. ++++||+||+++
T Consensus 77 --~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~ 140 (347)
T 2iy9_A 77 --PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLA 140 (347)
T ss_dssp --SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSC
T ss_pred --CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcc
Confidence 001113567889999999999997 12 2799999999999999775533 899999999999
Q ss_pred --CCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCC-------CCCcCCCCC----------ceEEEec
Q 004242 283 --GVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPS-------ISTVDNTAP----------WIMTVAA 343 (766)
Q Consensus 283 --g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~~itVga 343 (766)
|++|||||||........+.+..++..+.++|++||+||||+|.. ...++...+ ++|+|||
T Consensus 141 ~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga 220 (347)
T 2iy9_A 141 PGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAA 220 (347)
T ss_dssp TTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEE
T ss_pred cCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEE
Confidence 999999999976544556778888889999999999999999975 345677788 9999999
Q ss_pred ccC--CcceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhH
Q 004242 344 SYT--DRSFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGE 421 (766)
Q Consensus 344 ~~~--~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~ 421 (766)
++. +....
T Consensus 221 ~~~~~~g~~~---------------------------------------------------------------------- 230 (347)
T 2iy9_A 221 LAQYRKGETP---------------------------------------------------------------------- 230 (347)
T ss_dssp ECCCCTTSCC----------------------------------------------------------------------
T ss_pred cccCCCCcee----------------------------------------------------------------------
Confidence 753 11000
Q ss_pred HHHhcCceEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCC
Q 004242 422 QVKLAGGAGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSL 501 (766)
Q Consensus 422 ~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~ 501 (766)
.....++.||++||+
T Consensus 231 ----------------------------------------------------------------~~~~~~~~fS~~G~~- 245 (347)
T 2iy9_A 231 ----------------------------------------------------------------VLHGGGITGSRFGNN- 245 (347)
T ss_dssp ----------------------------------------------------------------CBCCCSSSCBCBCTT-
T ss_pred ----------------------------------------------------------------cccCCCCCCCCCCCC-
Confidence 001145799999995
Q ss_pred CCCCcccCcEEeCCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccc
Q 004242 502 VGHDVIKPDVTAPGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAY 581 (766)
Q Consensus 502 ~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~ 581 (766)
||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||+
T Consensus 246 ------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~ 306 (347)
T 2iy9_A 246 ------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESAD 306 (347)
T ss_dssp ------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSE
T ss_pred ------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCc
Confidence 679999999999999754 7999999999999999999999999999999999999999999
Q ss_pred cCCCCCCccccCCCCCCCCCCCcccccCCccCccccCCC
Q 004242 582 TLNNRNSPIADVGGSSDTPLATAFAFGSGHVDPESASDP 620 (766)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~G~id~~~Al~~ 620 (766)
++... ....+|+|+||+.+|++.
T Consensus 307 ~~~~~----------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 307 KYPSL----------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp ECGGG----------------TTTSGGGEECCHHHHHHH
T ss_pred cCCCC----------------CCccccCCEecHHHHHHH
Confidence 86421 225899999999999873
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=2.3e-49 Score=430.95 Aligned_cols=301 Identities=27% Similarity=0.379 Sum_probs=221.2
Q ss_pred CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccC-CCccccccccccccccccccCccc
Q 004242 129 GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQS-NCNNKLIGARAFFKGYESVVGRIN 207 (766)
Q Consensus 129 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~-~~n~kiig~~~~~~g~~~~~~~~~ 207 (766)
+..+|+.+++|+||+||||||||+ +||+|.++-.. .|+-........... ...+.. ....+.+.+... .
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~-~~~~~~~~~~~~----~ 90 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPF-DEGDWFDNWACG----G 90 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCB-CCCCCBCTTTTS----C
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCcc-cccccccccccc----C
Confidence 367899999999999999999998 99999765211 111000000000000 000000 000000000000 0
Q ss_pred cccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHHHHHHh------
Q 004242 208 ETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVA------ 281 (766)
Q Consensus 208 ~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~------ 281 (766)
.+.+.....|..||||||||||+|...+... +.||||+|+|+.+|+++..++..++++++|+||++
T Consensus 91 ~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~ 162 (340)
T 3lpc_A 91 RPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGI 162 (340)
T ss_dssp TTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTS
T ss_pred CCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhccccccc
Confidence 0112224678899999999999998654322 37999999999999998877889999999999998
Q ss_pred ----CCCcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcCCCCCceEEEecccCCcceeEEEEe
Q 004242 282 ----DGVDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS-TVDNTAPWIMTVAASYTDRSFPAIVKL 356 (766)
Q Consensus 282 ----~g~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~~itVga~~~~~~~~~~~~~ 356 (766)
.+++|||||||.... ....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 163 ~~~~~~~~Vin~S~G~~~~--~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------- 231 (340)
T 3lpc_A 163 PENRNPAKVINMSLGSDGQ--CSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR--------- 231 (340)
T ss_dssp CCCSSCCSEEEECCCEESC--CCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT---------
T ss_pred ccccCCCeEEEeCcCCCCC--cchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC---------
Confidence 899999999997532 2345667777889999999999999987654 467788999999996421
Q ss_pred CCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecC
Q 004242 357 GNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNS 436 (766)
Q Consensus 357 ~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~ 436 (766)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCC
Q 004242 437 DKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGV 516 (766)
Q Consensus 437 ~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 516 (766)
+.++.||++|| ||||+|||.
T Consensus 232 ----------------------------------------------------~~~~~~S~~g~--------~~di~ApG~ 251 (340)
T 3lpc_A 232 ----------------------------------------------------GIRASFSNYGV--------DVDLAAPGQ 251 (340)
T ss_dssp ----------------------------------------------------SSBCTTCCBST--------TCCEEEECS
T ss_pred ----------------------------------------------------CCcCCCCCCCC--------CceEEecCC
Confidence 26789999998 459999999
Q ss_pred cEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhh-C---CCCCHHHHHHHHHhccccCCCCCCcccc
Q 004242 517 NILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSV-H---EDWSTAAIKSALMTTAYTLNNRNSPIAD 592 (766)
Q Consensus 517 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~~s~~~ik~~L~~TA~~~~~~~~~~~~ 592 (766)
+|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++|++||+++.
T Consensus 252 ~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~-------- 317 (340)
T 3lpc_A 252 DILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFN-------- 317 (340)
T ss_dssp SEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCS--------
T ss_pred CeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCC--------
Confidence 999998754211 11236999999999999999999999998 5 99999999999999999762
Q ss_pred CCCCCCCCCCCcccccCCccCccccCCC
Q 004242 593 VGGSSDTPLATAFAFGSGHVDPESASDP 620 (766)
Q Consensus 593 ~~~~~~~~~~~~~~~G~G~id~~~Al~~ 620 (766)
......||+|+||+.+|++.
T Consensus 318 --------~~~~~~~G~G~vd~~~Av~~ 337 (340)
T 3lpc_A 318 --------GRLDRALGSGIVDAEAAVNS 337 (340)
T ss_dssp --------SCCSSCCCSSBCCHHHHHHH
T ss_pred --------CCCCCCcccceecHHHHHHH
Confidence 23455899999999999874
No 23
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=4.5e-48 Score=464.28 Aligned_cols=356 Identities=21% Similarity=0.211 Sum_probs=244.2
Q ss_pred CCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC---CCHHHHHHHHHHHHh-----CCCcEE
Q 004242 216 RDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG---CSSSDILAAIDKAVA-----DGVDVL 287 (766)
Q Consensus 216 ~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~a~~-----~g~dVI 287 (766)
.|+.||||||||||||.. ++. .+.||||+|+|+.+|+++..+ ....+++.+|.+|++ .|++||
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~~--------g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVI 337 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SSR--------DVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVI 337 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SSS--------SSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEE
T ss_pred CCCCCcHHHHHHHHhcCC-CCC--------CceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEE
Confidence 578999999999999986 322 237999999999999997643 356778888888887 799999
Q ss_pred EeccCCCCCCCcccHHHHHHHHHH-hCCCEEEEecCCCCCCCCC--cCC--CCCceEEEecccCCcceeEEEEeCCCceE
Q 004242 288 SLSLGGSSRPYYRDTVAIASFGAT-QSGVFVSCSAGNSGPSIST--VDN--TAPWIMTVAASYTDRSFPAIVKLGNGHSF 362 (766)
Q Consensus 288 n~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~--~~~--~~p~~itVga~~~~~~~~~~~~~~~g~~~ 362 (766)
|||||........+.+..++.++. ++|++||+||||+|....+ .++ ..+++|+|||++........+....
T Consensus 338 NmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~~~---- 413 (1354)
T 3lxu_X 338 NMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAMRE---- 413 (1354)
T ss_dssp EECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC----------
T ss_pred EcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccccc----
Confidence 999999765444566777777876 8999999999999986543 444 3799999999754321100000000
Q ss_pred eeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCccc
Q 004242 363 EGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEE 442 (766)
Q Consensus 363 ~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 442 (766)
T Consensus 414 -------------------------------------------------------------------------------- 413 (1354)
T 3lxu_X 414 -------------------------------------------------------------------------------- 413 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeec
Q 004242 443 LIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAW 522 (766)
Q Consensus 443 ~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 522 (766)
...+.++.|||+||+.+ +++||||+|||++|+++.
T Consensus 414 -------------------------------------------~~~g~~asFSS~GPt~d--g~~KpDIaAPG~~I~St~ 448 (1354)
T 3lxu_X 414 -------------------------------------------KLPGNVYTWTSRDPCID--GGQGVTVCAPGGAIASVP 448 (1354)
T ss_dssp -----------------------------------------------CCCCCCCCSCCSS--SSCCEEEEEEC-------
T ss_pred -------------------------------------------CCCCccccccCCCCCcc--CCCcceEEecCceEEEee
Confidence 11237899999999986 899999999999999985
Q ss_pred CCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHh----hCCCCCHHHHHHHHHhccccCCCCCCccccCCCCCC
Q 004242 523 PATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKS----VHEDWSTAAIKSALMTTAYTLNNRNSPIADVGGSSD 598 (766)
Q Consensus 523 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~----~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~~~~~ 598 (766)
... ...|..++|||||||||||++|||++ .+|+|++.+||++|++||+++.
T Consensus 449 ~~~-----------~~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~-------------- 503 (1354)
T 3lxu_X 449 QFT-----------MSKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLG-------------- 503 (1354)
T ss_dssp -------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCT--------------
T ss_pred cCC-----------CCceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCC--------------
Confidence 432 11789999999999999999999986 7999999999999999999763
Q ss_pred CCCCCcccccCCccCccccCCCCceecCCchhhHHHhhhcCCCcccceeecccccccCCCCCCCCCCCCCCceeeeccCC
Q 004242 599 TPLATAFAFGSGHVDPESASDPGLIYDIATEDYLDYLCSLNYTSLQLALFAGGNFTCPNPSAFHPGKLNYPSFAVNFKGN 678 (766)
Q Consensus 599 ~~~~~~~~~G~G~id~~~Al~~~lv~d~~~~d~~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~ 678 (766)
...++.||+|+||+.+|++..+.|+....+++.|+|..+..... .+.-+.. .+ + .
T Consensus 504 --~~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~r-gIylR~~-~~-------------~--------~ 558 (1354)
T 3lxu_X 504 --YVDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADK-GIHLRQG-VQ-------------R--------N 558 (1354)
T ss_dssp --TSCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBS-SEEECSS-CC-------------C--------S
T ss_pred --CCCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCC-ceEEecc-cc-------------C--------C
Confidence 23456899999999999999999999999999999988743221 1111100 00 0 0
Q ss_pred ccceeEEEEEEEEecCC--CCeE----EEEEEe-CCCceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCCeEEEEEEE
Q 004242 679 VKNMSLEYERSVTNVGT--SYCT----YAVKVE-EPNGVLVTITPPILSFQKIGEILSYKVTFVSLRGASNESFGSLTWV 751 (766)
Q Consensus 679 ~~~~~~~~~rtvtn~g~--~~~t----y~~~v~-~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~ 751 (766)
.....++++-+..|... .... -++.+. ..+- |+ -|..|.+ .++.++|.|+|+....+.+-+++.|...
T Consensus 559 ~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~~w--v~-~p~~l~l--~~~~r~~~v~vDp~~L~~G~h~~~v~~~ 633 (1354)
T 3lxu_X 559 SIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQPW--VQ-CGAFLDL--SYGTRSIAVRVDPTGLQPGVHSAVIRAY 633 (1354)
T ss_dssp CEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESSTT--EE-ECSCEEC--TTSCEEEEEEECGGGCCSEEEEEEEEEE
T ss_pred ceEEEEEEeeeecCcccCChhhccceEEEEEEecCCCc--ee-cccceee--cCCCceEEEEECCCCCCCcceeEEEEEE
Confidence 00012222333322111 1111 122222 1222 22 3777766 3788999999998765433389999877
Q ss_pred C-----CceeEEeEEEEE
Q 004242 752 S-----GKYAVKSPIAVT 764 (766)
Q Consensus 752 ~-----~~~~v~~p~~v~ 764 (766)
| .+...|+||.|.
T Consensus 634 D~~~~~~gp~f~ipvTv~ 651 (1354)
T 3lxu_X 634 DTDCVQKGSLFEIPVTVV 651 (1354)
T ss_dssp ESSCTTSCCSEEEEEEEE
T ss_pred EcCCcccCceEEeeEEEE
Confidence 6 468999999886
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.2e-47 Score=405.13 Aligned_cols=235 Identities=30% Similarity=0.408 Sum_probs=199.9
Q ss_pred CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccc
Q 004242 130 IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINET 209 (766)
Q Consensus 130 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 209 (766)
..+|..+++|+||+|||||||||++||+|.++ ++..++|... +
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~~------~---- 61 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR---------------------------SVSGYDFVDN------D---- 61 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC---------------------------EEEEEETTTT------B----
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC---------------------------ccccccccCC------C----
Confidence 46899999999999999999999999999653 2222333221 1
Q ss_pred cCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhC--CCcE
Q 004242 210 VDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVAD--GVDV 286 (766)
Q Consensus 210 ~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dV 286 (766)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|++++ +++|
T Consensus 62 ---~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~V 124 (284)
T 1sh7_A 62 ---ADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSV 124 (284)
T ss_dssp ---SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEE
T ss_pred ---CCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcE
Confidence 145788999999999999872 5999999999999998766 7888999999999984 7999
Q ss_pred EEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcCCCCCceEEEecccCCcceeEEEEeCCCceEeee
Q 004242 287 LSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS-TVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGS 365 (766)
Q Consensus 287 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~ 365 (766)
||||||... ...+..++.++.++|++||+||||+|.... .++...|++|+|||++.
T Consensus 125 in~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------- 181 (284)
T 1sh7_A 125 ANMSLGGGQ----STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTS------------------- 181 (284)
T ss_dssp EEECCCBSC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECT-------------------
T ss_pred EEeCCCCCC----CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecC-------------------
Confidence 999999863 456777778899999999999999997653 45778899999999642
Q ss_pred eeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccccc
Q 004242 366 SLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIA 445 (766)
Q Consensus 366 ~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 445 (766)
T Consensus 182 -------------------------------------------------------------------------------- 181 (284)
T 1sh7_A 182 -------------------------------------------------------------------------------- 181 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCC
Q 004242 446 DAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPAT 525 (766)
Q Consensus 446 ~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 525 (766)
.+.++.||++||.. ||+|||++|+++++.+
T Consensus 182 ------------------------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~ 211 (284)
T 1sh7_A 182 ------------------------------------------SDSRSSFSNWGSCV--------DLFAPGSQIKSAWYDG 211 (284)
T ss_dssp ------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTS
T ss_pred ------------------------------------------CCCcCcccCCCCcc--------EEEeccCCeEEecCCC
Confidence 12678999999965 9999999999998654
Q ss_pred CCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 004242 526 TSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLN 584 (766)
Q Consensus 526 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 584 (766)
.|..++|||||||||||++|||+|++|+|+++|||++|++||++..
T Consensus 212 -------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 212 -------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp -------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 7999999999999999999999999999999999999999999763
No 25
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=4.2e-48 Score=434.20 Aligned_cols=291 Identities=27% Similarity=0.297 Sum_probs=222.1
Q ss_pred CCccc-cCCCCCCcEEEEEecccCC------CCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccc
Q 004242 130 IGLWD-ATNLAKDVIVGVIDTGIWP------EHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESV 202 (766)
Q Consensus 130 ~~~~~-~~~~G~gv~VaVIDtGid~------~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~ 202 (766)
..+|. .+++|+||+|||||||||+ .||+|.++ ++..++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~---------------------------i~~~~~~~~~---- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK---------------------------ITALYALGRT---- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC---------------------------EEEEEETTTT----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC---------------------------EeeeccccCC----
Confidence 45887 7999999999999999999 79999653 2222333211
Q ss_pred cCccccccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCC---CHHHHHHHHHHH
Q 004242 203 VGRINETVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGC---SSSDILAAIDKA 279 (766)
Q Consensus 203 ~~~~~~~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~a 279 (766)
..+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..+. ...++.++|++|
T Consensus 60 ----------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a 118 (434)
T 1wmd_A 60 ----------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQA 118 (434)
T ss_dssp ----------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHH
T ss_pred ----------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHH
Confidence 1467889999999999998631 1379999999999999987653 456899999999
Q ss_pred HhCCCcEEEeccCCCCCCCcccHHHHHHHHH-HhCCCEEEEecCCCCCCCC--CcCCCCCceEEEecccCCcceeEEEEe
Q 004242 280 VADGVDVLSLSLGGSSRPYYRDTVAIASFGA-TQSGVFVSCSAGNSGPSIS--TVDNTAPWIMTVAASYTDRSFPAIVKL 356 (766)
Q Consensus 280 ~~~g~dVIn~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~~--~~~~~~p~~itVga~~~~~~~~~~~~~ 356 (766)
+++|++|||||||......+ +....++..+ .++|+++|+||||+|.... ..+..++++|+|||++..+...
T Consensus 119 ~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~----- 192 (434)
T 1wmd_A 119 YSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF----- 192 (434)
T ss_dssp HHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-----
T ss_pred HhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-----
Confidence 99999999999998653222 2334444444 5899999999999997643 4567889999999975322100
Q ss_pred CCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecC
Q 004242 357 GNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNS 436 (766)
Q Consensus 357 ~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~ 436 (766)
|.
T Consensus 193 ----------------------------------------------------------------------~~-------- 194 (434)
T 1wmd_A 193 ----------------------------------------------------------------------GS-------- 194 (434)
T ss_dssp ----------------------------------------------------------------------CG--------
T ss_pred ----------------------------------------------------------------------Cc--------
Confidence 00
Q ss_pred CCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCC
Q 004242 437 DKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGV 516 (766)
Q Consensus 437 ~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~ 516 (766)
+ ....+.++.|||+||+.+ +++||||+|||+
T Consensus 195 -----------------------------~------------------~~~~~~~a~fS~~G~~~~--g~~kpdi~ApG~ 225 (434)
T 1wmd_A 195 -----------------------------Y------------------ADNINHVAQFSSRGPTKD--GRIKPDVMAPGT 225 (434)
T ss_dssp -----------------------------G------------------GSCTTSBCTTSCCCCCTT--SCCCCCEEEECS
T ss_pred -----------------------------c------------------cCCCCccccccCCCCCCC--CCCCceEEcCCC
Confidence 0 011247899999999986 999999999999
Q ss_pred cEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCC-----CHHHHHHHHHhccccCCCCCCccc
Q 004242 517 NILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDW-----STAAIKSALMTTAYTLNNRNSPIA 591 (766)
Q Consensus 517 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~-----s~~~ik~~L~~TA~~~~~~~~~~~ 591 (766)
+|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++.
T Consensus 226 ~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~------- 297 (434)
T 1wmd_A 226 FILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIG------- 297 (434)
T ss_dssp SEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCS-------
T ss_pred CeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccC-------
Confidence 999998643210000 00113379999999999999999999999999876 89999999999999642
Q ss_pred cCCCCCCCCCCCcccccCCccCccccCCCC
Q 004242 592 DVGGSSDTPLATAFAFGSGHVDPESASDPG 621 (766)
Q Consensus 592 ~~~~~~~~~~~~~~~~G~G~id~~~Al~~~ 621 (766)
...+.+.||||++|+.+|++..
T Consensus 298 --------~~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 298 --------LGYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp --------SCSSCTTTTTCBCCHHHHHTCE
T ss_pred --------CCCCCccCCcCeEeHHHhcccc
Confidence 2345678999999999999744
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.2e-46 Score=396.97 Aligned_cols=236 Identities=29% Similarity=0.388 Sum_probs=198.9
Q ss_pred CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccc
Q 004242 130 IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINET 209 (766)
Q Consensus 130 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 209 (766)
..+|..+++|+||+|||||||||++||+|.++ +...++|.+ .+
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~---------------------------~~~~~d~~~------~~---- 63 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR---------------------------ASSGYDFID------ND---- 63 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTT------TB----
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc---------------------------cccCeecCC------CC----
Confidence 46799999999999999999999999999654 222223322 11
Q ss_pred cCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHh--CCCcE
Q 004242 210 VDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVA--DGVDV 286 (766)
Q Consensus 210 ~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~--~g~dV 286 (766)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|+++ .+++|
T Consensus 64 ---~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~V 126 (278)
T 2b6n_A 64 ---YDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAV 126 (278)
T ss_dssp ---SCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEE
T ss_pred ---CCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeE
Confidence 145788999999999999862 6999999999999998766 788899999999997 59999
Q ss_pred EEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcCCCCCceEEEecccCCcceeEEEEeCCCceEeee
Q 004242 287 LSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS-TVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGS 365 (766)
Q Consensus 287 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~ 365 (766)
||||||... .+.+..++.++.++|++||+||||+|.... .++...+++|+|||++.
T Consensus 127 in~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------- 183 (278)
T 2b6n_A 127 ANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTS------------------- 183 (278)
T ss_dssp EEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------------
T ss_pred EEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCC-------------------
Confidence 999999854 356777777899999999999999997654 35778899999999642
Q ss_pred eeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccccc
Q 004242 366 SLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIA 445 (766)
Q Consensus 366 ~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 445 (766)
T Consensus 184 -------------------------------------------------------------------------------- 183 (278)
T 2b6n_A 184 -------------------------------------------------------------------------------- 183 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCC
Q 004242 446 DAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPAT 525 (766)
Q Consensus 446 ~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 525 (766)
.+.++.||++||.. ||+|||++|+++++..
T Consensus 184 ------------------------------------------~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~ 213 (278)
T 2b6n_A 184 ------------------------------------------NDSRSSFSNYGTCL--------DIYAPGSSITSSWYTS 213 (278)
T ss_dssp ------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTS
T ss_pred ------------------------------------------CCCcCCcCCCCCCC--------eEEeCCCCeECcccCC
Confidence 12678999999854 9999999999998642
Q ss_pred CCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccC
Q 004242 526 TSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTL 583 (766)
Q Consensus 526 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~ 583 (766)
. ..|..++|||||||||||++|||+|++|+|++.+||++|++||++.
T Consensus 214 ~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 214 N-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp T-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred C-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 1 1789999999999999999999999999999999999999999875
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=6.3e-47 Score=399.29 Aligned_cols=235 Identities=29% Similarity=0.379 Sum_probs=200.4
Q ss_pred CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccc
Q 004242 130 IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINET 209 (766)
Q Consensus 130 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 209 (766)
..+|..+++|+||+|||||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------ 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR---------------------------ARVGYDALG------------ 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC---------------------------EEEEEETTS------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC---------------------------eeccccCCC------------
Confidence 56899999999999999999999999999654 222222221
Q ss_pred cCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhC--CCcE
Q 004242 210 VDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVAD--GVDV 286 (766)
Q Consensus 210 ~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~--g~dV 286 (766)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ ....+++++|+|+++. +++|
T Consensus 62 ---~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~v 124 (276)
T 4dzt_A 62 ---GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAV 124 (276)
T ss_dssp ---SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEE
T ss_pred ---CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeE
Confidence 135678999999999999872 6999999999999998776 7889999999999987 8999
Q ss_pred EEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC-cCCCCCceEEEecccCCcceeEEEEeCCCceEeee
Q 004242 287 LSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIST-VDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFEGS 365 (766)
Q Consensus 287 In~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~g~ 365 (766)
||||||... ...+..++.++.++|+++|+||||+|..... .+...+++|+|||++.
T Consensus 125 in~S~g~~~----~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------------- 181 (276)
T 4dzt_A 125 ANMSLGGGV----STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS------------------- 181 (276)
T ss_dssp EEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------------
T ss_pred EEECCCCCC----CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC-------------------
Confidence 999999753 4567777788999999999999999976554 4778899999999642
Q ss_pred eeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccccc
Q 004242 366 SLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEELIA 445 (766)
Q Consensus 366 ~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~ 445 (766)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCCC
Q 004242 446 DAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPAT 525 (766)
Q Consensus 446 ~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~~ 525 (766)
.+.++.||++||.. ||+|||++|+++++..
T Consensus 182 ------------------------------------------~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~ 211 (276)
T 4dzt_A 182 ------------------------------------------SDARASFSNYGSCV--------DLFAPGASIPSAWYTS 211 (276)
T ss_dssp ------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEECTTS
T ss_pred ------------------------------------------CCCcCCcCCCCCCc--------eEEeCCCCeEccccCC
Confidence 12688999999976 9999999999998653
Q ss_pred CCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 004242 526 TSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLN 584 (766)
Q Consensus 526 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 584 (766)
. ..|..++|||||||||||++|||+|++|++++++||++|++||++..
T Consensus 212 ~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 212 D-----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp S-----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred C-----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 2 17899999999999999999999999999999999999999999864
No 28
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.9e-47 Score=445.03 Aligned_cols=296 Identities=21% Similarity=0.212 Sum_probs=205.3
Q ss_pred CCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccc
Q 004242 130 IGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINET 209 (766)
Q Consensus 130 ~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~ 209 (766)
..+|..+++|+||+|||||||||++||+|.++- +.+.++|..+. .
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~--------------------------~~~~~~~~~~~------~--- 104 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGS------D--- 104 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTCS------S---
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc--------------------------ccCceeccCCC------C---
Confidence 568999999999999999999999999997541 11223333221 0
Q ss_pred cCCCCCCC-CCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCH--HHHHHHHHHHHhCCCcE
Q 004242 210 VDYRSPRD-AQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSS--SDILAAIDKAVADGVDV 286 (766)
Q Consensus 210 ~~~~~~~d-~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~i~~ai~~a~~~g~dV 286 (766)
...|.| ..||||||||||||. .++.. +.||||+|+|+.+|+++..+... ..+++....+..++++|
T Consensus 105 --d~~p~d~~~gHGT~vAGiiaa~-~n~~g--------~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~V 173 (600)
T 2oxa_A 105 --DPTPTDPDTGHGTSVSGIIAAV-DNAIG--------TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRV 173 (600)
T ss_dssp --CCCCCSTTCCHHHHHHHHHHCC-SSSSS--------CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSE
T ss_pred --CCCCCCCCCCCccHHHHHhhcc-cCCCc--------ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeE
Confidence 113444 789999999999998 33222 27999999999999998766432 33444444477789999
Q ss_pred EEeccCCCCC-CC----cccHHHHHHHH---HHhCCCEEEEecCCCCCCCC----------------------CcCCCCC
Q 004242 287 LSLSLGGSSR-PY----YRDTVAIASFG---ATQSGVFVSCSAGNSGPSIS----------------------TVDNTAP 336 (766)
Q Consensus 287 In~SlG~~~~-~~----~~~~~~~a~~~---a~~~Gi~vV~AAGN~g~~~~----------------------~~~~~~p 336 (766)
||||||.... .. ....+..++.. +.++|++||+||||+|.... ..++.++
T Consensus 174 in~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~ 253 (600)
T 2oxa_A 174 FNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNF 253 (600)
T ss_dssp EEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSS
T ss_pred EEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCc
Confidence 9999998653 11 11233333322 45789999999999986421 1122345
Q ss_pred ceEEEecccCCcceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCch
Q 004242 337 WIMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSR 416 (766)
Q Consensus 337 ~~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~ 416 (766)
|+|+|||++
T Consensus 254 ~vItVgA~~----------------------------------------------------------------------- 262 (600)
T 2oxa_A 254 WNLVVSALN----------------------------------------------------------------------- 262 (600)
T ss_dssp SEEEEEEEC-----------------------------------------------------------------------
T ss_pred eeEEEeccc-----------------------------------------------------------------------
Confidence 677777643
Q ss_pred hhhhHHHHhcCceEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccC
Q 004242 417 TGKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSS 496 (766)
Q Consensus 417 ~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs 496 (766)
..+.++.||+
T Consensus 263 ----------------------------------------------------------------------~~g~~a~fS~ 272 (600)
T 2oxa_A 263 ----------------------------------------------------------------------ADGVRSSYSS 272 (600)
T ss_dssp ----------------------------------------------------------------------TTSSBCTTCC
T ss_pred ----------------------------------------------------------------------CCCCcCCcCC
Confidence 1237899999
Q ss_pred CCCCCCCCCcccCcEEeCCCcEEeecCC-------CCCCC--------------CCCCCccccceEEeecccchhhhhhh
Q 004242 497 RGPSLVGHDVIKPDVTAPGVNILAAWPA-------TTSPS--------------MLKSDDRRVLFNIISGTSMSCPHVSG 555 (766)
Q Consensus 497 ~Gp~~~~~~~lKPDI~APG~~I~sa~~~-------~~~~~--------------~~~~~~~~~~y~~~sGTSmAaP~VAG 555 (766)
+||+. ||+|||++|.+..+. ..... ....+.....|..++|||||||||||
T Consensus 273 ~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAG 344 (600)
T 2oxa_A 273 VGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSG 344 (600)
T ss_dssp BCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHH
T ss_pred CCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHH
Confidence 99987 999999996554332 10000 00001112248999999999999999
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccc--------------------cCCCCCCCCCCCcccccCCccCcc
Q 004242 556 LAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIA--------------------DVGGSSDTPLATAFAFGSGHVDPE 615 (766)
Q Consensus 556 ~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~G~G~id~~ 615 (766)
++|||+|++|+|++++||++|++||++++..+.++. .... ....++.||||+||+.
T Consensus 345 vaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~----g~~~~~~~G~G~vda~ 420 (600)
T 2oxa_A 345 AMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAA----GMWFSPTYGFGLIDVN 420 (600)
T ss_dssp HHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTT----SCEEBTTTBTCBCCHH
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCC----CccccccCCCchhhHH
Confidence 999999999999999999999999999875542211 0111 1224578999999999
Q ss_pred ccCCCCcee
Q 004242 616 SASDPGLIY 624 (766)
Q Consensus 616 ~Al~~~lv~ 624 (766)
+|++.+.-+
T Consensus 421 ~Av~~A~~~ 429 (600)
T 2oxa_A 421 KALELAANH 429 (600)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHhc
Confidence 999854433
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=2.6e-47 Score=401.66 Aligned_cols=227 Identities=34% Similarity=0.450 Sum_probs=193.8
Q ss_pred ccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccC
Q 004242 132 LWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVD 211 (766)
Q Consensus 132 ~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 211 (766)
.|+ ..+|+||+|||||||||++||+|.++ +...++|.
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~---------------------------~~~~~~~~--------------- 60 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR---------------------------AQMVKTYY--------------- 60 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEESS---------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc---------------------------cccccCCC---------------
Confidence 344 37899999999999999999999654 22222232
Q ss_pred CCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhCCC------
Q 004242 212 YRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVADGV------ 284 (766)
Q Consensus 212 ~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g~------ 284 (766)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ +..+++++||+|++++++
T Consensus 61 -~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~ 125 (279)
T 2pwa_A 61 -YSSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPK 125 (279)
T ss_dssp -SCSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTT
T ss_pred -CCCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCC
Confidence 035678999999999999872 6999999999999998876 788999999999999987
Q ss_pred -cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcCCCCCceEEEecccCCcceeEEEEeCCCceE
Q 004242 285 -DVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS-TVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSF 362 (766)
Q Consensus 285 -dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~ 362 (766)
+|||||||.. ..+.+..++.++.++|++||+||||+|.... .++...|++|+|||++.+
T Consensus 126 ~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------------- 186 (279)
T 2pwa_A 126 GVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------------- 186 (279)
T ss_dssp EEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------------
T ss_pred ccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------------
Confidence 9999999975 2456777888899999999999999997654 457788999999996421
Q ss_pred eeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCccc
Q 004242 363 EGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEE 442 (766)
Q Consensus 363 ~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~ 442 (766)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeec
Q 004242 443 LIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAW 522 (766)
Q Consensus 443 ~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~ 522 (766)
+.++.||++||.. ||+|||++|++++
T Consensus 187 ----------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~ 212 (279)
T 2pwa_A 187 ----------------------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTW 212 (279)
T ss_dssp ----------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEE
T ss_pred ----------------------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEee
Confidence 2678999999964 9999999999998
Q ss_pred CCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccC
Q 004242 523 PATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTL 583 (766)
Q Consensus 523 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~ 583 (766)
+.+ .|..++|||||||||||++|||+|+ |++++.+||++|++||++.
T Consensus 213 ~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~ 259 (279)
T 2pwa_A 213 IGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKG 259 (279)
T ss_dssp TTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEES
T ss_pred cCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccc
Confidence 764 7999999999999999999999999 9999999999999999974
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=1.3e-46 Score=425.69 Aligned_cols=292 Identities=15% Similarity=0.146 Sum_probs=214.5
Q ss_pred CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCcccc
Q 004242 129 GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINE 208 (766)
Q Consensus 129 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~ 208 (766)
+..+|..+++|+||+|||||||||++||+|.++-. ....++|.+. +.+
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~-------------------------~~~~~d~~~~------~~~- 74 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYD-------------------------PGASFDVNDQ------DPD- 74 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBC-------------------------GGGCEETTTT------BSC-
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccC-------------------------ccCcccccCC------CCC-
Confidence 35789999999999999999999999999976410 0011222211 111
Q ss_pred ccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHHHHHHh-CCCcEE
Q 004242 209 TVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVA-DGVDVL 287 (766)
Q Consensus 209 ~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVI 287 (766)
+.+...+.|..+|||||||||||...++.. +.||||+|+|+.+|+++ +..+++++|++++++ ++++||
T Consensus 75 p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vi 143 (471)
T 1p8j_A 75 PQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIY 143 (471)
T ss_dssp CCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEE
T ss_pred CCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEE
Confidence 011124568899999999999997544322 27999999999999985 346789999999999 999999
Q ss_pred EeccCCCCCC----CcccHHHHHHHHHH-----hCCCEEEEecCCCCCCCCC----cCCCCCceEEEecccCCcceeEEE
Q 004242 288 SLSLGGSSRP----YYRDTVAIASFGAT-----QSGVFVSCSAGNSGPSIST----VDNTAPWIMTVAASYTDRSFPAIV 354 (766)
Q Consensus 288 n~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~~----~~~~~p~~itVga~~~~~~~~~~~ 354 (766)
|||||..... .....+..++.++. .+|++||+||||+|..... ....++++|+|||++.
T Consensus 144 n~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~-------- 215 (471)
T 1p8j_A 144 SASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQ-------- 215 (471)
T ss_dssp EECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECT--------
T ss_pred EeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccC--------
Confidence 9999985431 11223344444444 4799999999999875321 1234589999999642
Q ss_pred EeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEe
Q 004242 355 KLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLL 434 (766)
Q Consensus 355 ~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~ 434 (766)
T Consensus 216 -------------------------------------------------------------------------------- 215 (471)
T 1p8j_A 216 -------------------------------------------------------------------------------- 215 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeC
Q 004242 435 NSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAP 514 (766)
Q Consensus 435 ~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~AP 514 (766)
.+.++.||++||... ...+|...+|
T Consensus 216 -----------------------------------------------------~g~~a~~S~~g~~~~--~~~~~~~~~~ 240 (471)
T 1p8j_A 216 -----------------------------------------------------FGNVPWYSEACSSTL--ATTYSSGNQN 240 (471)
T ss_dssp -----------------------------------------------------TSCCCTTCCBCTTCC--EEEECCCSTT
T ss_pred -----------------------------------------------------CCCcccccCCCCcce--EEeCCCCCCC
Confidence 126789999999875 3344555555
Q ss_pred CCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCccccCC
Q 004242 515 GVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIADVG 594 (766)
Q Consensus 515 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~~~ 594 (766)
|.+|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++++.....+....
T Consensus 241 g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~ 308 (471)
T 1p8j_A 241 EKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNG 308 (471)
T ss_dssp SCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECT
T ss_pred CCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecC
Confidence 67999987532 168999999999999999999999999999999999999999998764433232221
Q ss_pred CCCCCCCCCcccccCCccCccccCCCCc
Q 004242 595 GSSDTPLATAFAFGSGHVDPESASDPGL 622 (766)
Q Consensus 595 ~~~~~~~~~~~~~G~G~id~~~Al~~~l 622 (766)
.+ ......||+|+||+.+|++...
T Consensus 309 ~g----~~~~~~~G~G~vda~~Av~~a~ 332 (471)
T 1p8j_A 309 VG----RKVSHSYGYGLLDAGAMVALAQ 332 (471)
T ss_dssp TS----CEEBTTTBTCBCCHHHHHHHHH
T ss_pred CC----cccCCCCCCEEEcHhHHHHHhh
Confidence 11 2245689999999999998443
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=7.3e-46 Score=422.34 Aligned_cols=283 Identities=18% Similarity=0.196 Sum_probs=213.2
Q ss_pred CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCcccc
Q 004242 129 GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINE 208 (766)
Q Consensus 129 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~ 208 (766)
+..+|..+++|+||+|||||||||++||+|.++- + ..+.++|..+ ..
T Consensus 43 ~~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~-------~------------------~~~~~d~~~~------~~-- 89 (503)
T 2id4_A 43 VLDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF-------C------------------AEGSWDFNDN------TN-- 89 (503)
T ss_dssp CHHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB-------C------------------GGGCEETTTT------BS--
T ss_pred hHHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc-------c------------------ccCcccCCCC------CC--
Confidence 3568999999999999999999999999997641 0 0012233221 11
Q ss_pred ccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCCCCHHHHHHHHHHHHhCCCcEEE
Q 004242 209 TVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVADGVDVLS 288 (766)
Q Consensus 209 ~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~~g~dVIn 288 (766)
+.....|..||||||||||||...++.. +.||||+|+|+.+|+++.. +...++++||+||++++ +|||
T Consensus 90 --~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin 157 (503)
T 2id4_A 90 --LPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYS 157 (503)
T ss_dssp --CCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEE
T ss_pred --CCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEE
Confidence 1112357889999999999998544322 2699999999999999743 67888999999999998 9999
Q ss_pred eccCCCCCC----CcccHHHHHHHHHH-----hCCCEEEEecCCCCCCCC--CcC--CCCCceEEEecccCCcceeEEEE
Q 004242 289 LSLGGSSRP----YYRDTVAIASFGAT-----QSGVFVSCSAGNSGPSIS--TVD--NTAPWIMTVAASYTDRSFPAIVK 355 (766)
Q Consensus 289 ~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~--~~~p~~itVga~~~~~~~~~~~~ 355 (766)
||||..... .....+..++.++. .+|++||+||||+|.... .++ ..++++|+|||++.
T Consensus 158 ~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~--------- 228 (503)
T 2id4_A 158 CSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDH--------- 228 (503)
T ss_dssp ECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECT---------
T ss_pred eCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCC---------
Confidence 999986431 12234555555665 479999999999986533 222 25678999999642
Q ss_pred eCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEec
Q 004242 356 LGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLN 435 (766)
Q Consensus 356 ~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~ 435 (766)
T Consensus 229 -------------------------------------------------------------------------------- 228 (503)
T 2id4_A 229 -------------------------------------------------------------------------------- 228 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEe--
Q 004242 436 SDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTA-- 513 (766)
Q Consensus 436 ~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~A-- 513 (766)
.+.++.||++||.. |++|
T Consensus 229 ----------------------------------------------------~~~~a~~S~~g~~~--------~~~a~~ 248 (503)
T 2id4_A 229 ----------------------------------------------------KDLHPPYSEGCSAV--------MAVTYS 248 (503)
T ss_dssp ----------------------------------------------------TSCCCTTCCCCTTE--------EEEEEC
T ss_pred ----------------------------------------------------CCCcCCcCCCCCcc--------eEeecC
Confidence 12678999999987 7877
Q ss_pred --CCCcEEeecCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCC-CCcc
Q 004242 514 --PGVNILAAWPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNR-NSPI 590 (766)
Q Consensus 514 --PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~-~~~~ 590 (766)
||.+|+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||+++... ...+
T Consensus 249 ~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~ 316 (503)
T 2id4_A 249 SGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDW 316 (503)
T ss_dssp SBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCC
T ss_pred CCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCc
Confidence 899999995331 1799999999999999999999999999999999999999999987543 1111
Q ss_pred ccCCCCCCCCCCCcccccCCccCccccCCCC
Q 004242 591 ADVGGSSDTPLATAFAFGSGHVDPESASDPG 621 (766)
Q Consensus 591 ~~~~~~~~~~~~~~~~~G~G~id~~~Al~~~ 621 (766)
.....+ ......||+|+||+.+|++..
T Consensus 317 ~~~~~g----~~~~~~~G~G~vda~~Av~~a 343 (503)
T 2id4_A 317 RDSAMG----KKYSHRYGFGKIDAHKLIEMS 343 (503)
T ss_dssp EECSSS----SEEBTTTBTCBCCHHHHHHHH
T ss_pred eecCCC----CccCcccCCcEecHHHHHHHH
Confidence 111111 223568999999999999843
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=9.9e-46 Score=414.17 Aligned_cols=281 Identities=21% Similarity=0.215 Sum_probs=200.9
Q ss_pred ccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCccccccC
Q 004242 132 LWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETVD 211 (766)
Q Consensus 132 ~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~~ 211 (766)
.|..+++|+||+|||||||||++||+|.++- ....+.+... .++. ..
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~--------------------------~~~~~~~v~~---~dg~----~f 64 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRV--------------------------MVTDFENVPE---EDGT----RF 64 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTE--------------------------EEEEEECCCC---CC--------
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHcccc--------------------------cccCcccccC---CCCc----cc
Confidence 6888999999999999999999999997641 0000000000 0000 00
Q ss_pred CCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhC------CC
Q 004242 212 YRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVAD------GV 284 (766)
Q Consensus 212 ~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~------g~ 284 (766)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.+ ++.+++++||+|+++. ++
T Consensus 65 ~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~ 130 (546)
T 2qtw_B 65 HRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGP 130 (546)
T ss_dssp ---CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSC
T ss_pred cCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCC
Confidence 0245688999999999999873 5999999999999998776 7888999999999974 89
Q ss_pred cEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCC-CcCCCCCceEEEecccCCcceeEEEEeCCCceEe
Q 004242 285 DVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIS-TVDNTAPWIMTVAASYTDRSFPAIVKLGNGHSFE 363 (766)
Q Consensus 285 dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~~itVga~~~~~~~~~~~~~~~g~~~~ 363 (766)
+|||||||+. +...+..++.++.++|++||+||||+|.... .++...|++|+|||++.+...
T Consensus 131 ~VINmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------- 193 (546)
T 2qtw_B 131 LVVLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------- 193 (546)
T ss_dssp EEEEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-------------
T ss_pred eEEEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-------------
Confidence 9999999974 3456777888899999999999999997653 457788999999997532200
Q ss_pred eeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcccc
Q 004242 364 GSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEEL 443 (766)
Q Consensus 364 g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~ 443 (766)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecC
Q 004242 444 IADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWP 523 (766)
Q Consensus 444 ~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~ 523 (766)
...-..||++|+. |||+|||++|+++++
T Consensus 194 --------------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~ 221 (546)
T 2qtw_B 194 --------------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASS 221 (546)
T ss_dssp --------------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECT
T ss_pred --------------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeecc
Confidence 0001128999984 599999999999986
Q ss_pred CCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCcccc-CCCCCC----
Q 004242 524 ATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIAD-VGGSSD---- 598 (766)
Q Consensus 524 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~-~~~~~~---- 598 (766)
... ..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.......+.. ...+.+
T Consensus 222 ~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~~~~p~~~~~~tpN~l~ 290 (546)
T 2qtw_B 222 DCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINEAWFPEDQRVLTPNLVA 290 (546)
T ss_dssp TST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCGGGSCHHHHTTSCCEEC
T ss_pred CCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCCccCccccCCCCccchh
Confidence 531 1799999999999999999999999999999999999999999865322110100 000000
Q ss_pred CCCCCcccccCCc--cCccccCC
Q 004242 599 TPLATAFAFGSGH--VDPESASD 619 (766)
Q Consensus 599 ~~~~~~~~~G~G~--id~~~Al~ 619 (766)
..+.....+|+|+ .++..+..
T Consensus 291 ~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 291 ALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CCCCTTCC--CCCEEEEEECCCC
T ss_pred ccCCcccccCCCcchhchhccCC
Confidence 0122455678888 77777764
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=3.7e-45 Score=386.34 Aligned_cols=229 Identities=33% Similarity=0.447 Sum_probs=194.0
Q ss_pred CccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCcccccc
Q 004242 131 GLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINETV 210 (766)
Q Consensus 131 ~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~~~ 210 (766)
..|+.. +|+||+|||||||||++||+|.++ +...+.|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~---------------------------~~~~~~~~~------------- 62 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR---------------------------AKQIKSYAS------------- 62 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC---------------------------EEEEEECSS-------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc---------------------------cccccCCCC-------------
Confidence 356655 899999999999999999999654 222222221
Q ss_pred CCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHHHHHHhCC------
Q 004242 211 DYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAIDKAVADG------ 283 (766)
Q Consensus 211 ~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~a~~~g------ 283 (766)
...|..||||||||||+|+. .||||+|+|+.+|+++..+ +..++++++|+|+++++
T Consensus 63 ---~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~ 125 (279)
T 3f7m_A 63 ---TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCP 125 (279)
T ss_dssp ---SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCT
T ss_pred ---CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCC
Confidence 12378899999999999862 6999999999999998776 78899999999999886
Q ss_pred -CcEEEeccCCCCCCCcccHHHHHHHHHHhCCCEEEEecCCCCCCCCC-cCCCCCceEEEecccCCcceeEEEEeCCCce
Q 004242 284 -VDVLSLSLGGSSRPYYRDTVAIASFGATQSGVFVSCSAGNSGPSIST-VDNTAPWIMTVAASYTDRSFPAIVKLGNGHS 361 (766)
Q Consensus 284 -~dVIn~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~~itVga~~~~~~~~~~~~~~~g~~ 361 (766)
++|||||||.. ..+.+..++..+.++|++||+||||+|..... .+...+++|+|||++.
T Consensus 126 ~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~--------------- 186 (279)
T 3f7m_A 126 RRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDS--------------- 186 (279)
T ss_dssp TEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT---------------
T ss_pred CCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCC---------------
Confidence 89999999975 44667778889999999999999999977543 4778899999999642
Q ss_pred EeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCcc
Q 004242 362 FEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGE 441 (766)
Q Consensus 362 ~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~ 441 (766)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 3f7m_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccCCCCCCCCCCcccCcEEeCCCcEEee
Q 004242 442 ELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAA 521 (766)
Q Consensus 442 ~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa 521 (766)
.+.++.||++||.. ||+|||++|+++
T Consensus 187 ----------------------------------------------~~~~~~~S~~g~~~--------di~ApG~~i~s~ 212 (279)
T 3f7m_A 187 ----------------------------------------------NDVRSTFSNYGRVV--------DIFAPGTSITST 212 (279)
T ss_dssp ----------------------------------------------TSBBCTTCCBSTTC--------CEEEECSSEEEE
T ss_pred ----------------------------------------------CCCCCCCCCCCCCC--------eEEECCCCeEee
Confidence 12678999999965 999999999999
Q ss_pred cCCCCCCCCCCCCccccceEEeecccchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 004242 522 WPATTSPSMLKSDDRRVLFNIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYTLN 584 (766)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~~~ 584 (766)
++.. .|..++|||||||||||++|||+|++|+ ++++||++|++||++..
T Consensus 213 ~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 213 WIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp CGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred cCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 8654 7899999999999999999999999999 99999999999999753
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=1.2e-43 Score=414.59 Aligned_cols=295 Identities=22% Similarity=0.232 Sum_probs=199.9
Q ss_pred CCCccccCCCCCCcEEEEEecccCCCCCCCcCCCCCCCCCCcccccccCCCcccCCCccccccccccccccccccCcccc
Q 004242 129 GIGLWDATNLAKDVIVGVIDTGIWPEHIAFQDTGMPPVPSRWKGGCEEGTKFSQSNCNNKLIGARAFFKGYESVVGRINE 208 (766)
Q Consensus 129 ~~~~~~~~~~G~gv~VaVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~g~~~~~~~~n~kiig~~~~~~g~~~~~~~~~~ 208 (766)
+..+|.++++|+||+|||||||||++||||.++- ..+.++|..+.+
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~--------------------------~~~~~~~~~~~~-------- 104 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNV--------------------------RPGSKNVVTGSD-------- 104 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGB--------------------------CSCCBCTTTSSS--------
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcc--------------------------ccCcceeecCCC--------
Confidence 3568999999999999999999999999997640 112223322210
Q ss_pred ccCCCCCCCCCCCchhHHHhhccccccccccccccCCcccccccCceEEEeeeecCCC-CCHHHHHHHH-HHHHhCCCcE
Q 004242 209 TVDYRSPRDAQGHGTHTASTAAGNIVANANLFGLARGKAAGMRYTSRIAAYKACWSLG-CSSSDILAAI-DKAVADGVDV 286 (766)
Q Consensus 209 ~~~~~~~~d~~gHGThVAgi~aG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~a~~~g~dV 286 (766)
++....|..+|||||||||||.. ++ .| +.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|
T Consensus 105 --dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I 173 (600)
T 3hjr_A 105 --DPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRV 173 (600)
T ss_dssp --CCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSE
T ss_pred --CCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCE
Confidence 11223457899999999999863 21 12 27999999999999998776 6777877766 6778889999
Q ss_pred EEeccCCCCC-CCcc-----cHHHHHHHH--HHhCCCEEEEecCCCCCCCCC----------------------cCCCCC
Q 004242 287 LSLSLGGSSR-PYYR-----DTVAIASFG--ATQSGVFVSCSAGNSGPSIST----------------------VDNTAP 336 (766)
Q Consensus 287 In~SlG~~~~-~~~~-----~~~~~a~~~--a~~~Gi~vV~AAGN~g~~~~~----------------------~~~~~p 336 (766)
||+|||.... +... ..+..++.. ...+|+++|+||||.+..... .....+
T Consensus 174 ~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~~~~~ 253 (600)
T 3hjr_A 174 FNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNF 253 (600)
T ss_dssp EEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSSGGGGSS
T ss_pred EecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCcccccccCccccC
Confidence 9999997543 1111 112222222 236899999999997642110 001122
Q ss_pred ceEEEecccCCcceeEEEEeCCCceEeeeeeccCCCCceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCch
Q 004242 337 WIMTVAASYTDRSFPAIVKLGNGHSFEGSSLYSGKGSKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSR 416 (766)
Q Consensus 337 ~~itVga~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~ 416 (766)
++|+|||.
T Consensus 254 ~~IsVgA~------------------------------------------------------------------------ 261 (600)
T 3hjr_A 254 WNLVVSAL------------------------------------------------------------------------ 261 (600)
T ss_dssp SEEEEEEE------------------------------------------------------------------------
T ss_pred cceEEeee------------------------------------------------------------------------
Confidence 23333332
Q ss_pred hhhhHHHHhcCceEEEEecCCCCcccccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEeceeEecCCCCccccccC
Q 004242 417 TGKGEQVKLAGGAGMLLLNSDKEGEELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFKGTVFGNPAPVIASFSS 496 (766)
Q Consensus 417 ~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~fSs 496 (766)
...+.++.||+
T Consensus 262 ---------------------------------------------------------------------~~~g~~a~yS~ 272 (600)
T 3hjr_A 262 ---------------------------------------------------------------------NADGVRSSYSS 272 (600)
T ss_dssp ---------------------------------------------------------------------CTTSSBCTTCC
T ss_pred ---------------------------------------------------------------------cCCCCEeeccc
Confidence 22347889999
Q ss_pred CCCCCCCCCcccCcEEeCCCcEE--------eecCCCCCCC-------------CCCCCccccceEEeecccchhhhhhh
Q 004242 497 RGPSLVGHDVIKPDVTAPGVNIL--------AAWPATTSPS-------------MLKSDDRRVLFNIISGTSMSCPHVSG 555 (766)
Q Consensus 497 ~Gp~~~~~~~lKPDI~APG~~I~--------sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG 555 (766)
+|+.. +++|||.++. ...++..... ....+.....|..++|||||||||||
T Consensus 273 ~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAG 344 (600)
T 3hjr_A 273 VGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSG 344 (600)
T ss_dssp BCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHH
T ss_pred CCcce--------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHH
Confidence 99987 8999987632 2222110000 00011123468899999999999999
Q ss_pred HHHHHHhhCCCCCHHHHHHHHHhccccCCCCCCcccc--------------------CCCCCCCCCCCcccccCCccCcc
Q 004242 556 LAALLKSVHEDWSTAAIKSALMTTAYTLNNRNSPIAD--------------------VGGSSDTPLATAFAFGSGHVDPE 615 (766)
Q Consensus 556 ~aALl~~~~P~~s~~~ik~~L~~TA~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~G~G~id~~ 615 (766)
++|||+|++|+|+++|||++|++||++++....|+.. +..| ......||+|+||+.
T Consensus 345 vaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG----~~~s~~yGfG~vDA~ 420 (600)
T 3hjr_A 345 AMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAG----MWFSPTYGFGLIDVN 420 (600)
T ss_dssp HHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTS----CEEBTTTBTCBCCHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCC----ceEccccCCceecHH
Confidence 9999999999999999999999999999876655321 1111 122457999999999
Q ss_pred ccCCCC
Q 004242 616 SASDPG 621 (766)
Q Consensus 616 ~Al~~~ 621 (766)
+|++.+
T Consensus 421 ~aV~~A 426 (600)
T 3hjr_A 421 KALELA 426 (600)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998743
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.92 E-value=1.6e-25 Score=255.44 Aligned_cols=96 Identities=25% Similarity=0.362 Sum_probs=78.0
Q ss_pred ccccccCceEEEeeeecCCCCCHHHHHHHHHHHHh---CCCcEEEeccCCCCCCC---cccHHHHHHHHHHhCCCEEEEe
Q 004242 247 AAGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVA---DGVDVLSLSLGGSSRPY---YRDTVAIASFGATQSGVFVSCS 320 (766)
Q Consensus 247 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~---~g~dVIn~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~vV~A 320 (766)
+.||||+|+|+.|++. ....+++++|+||++ ++++|||||||...... +.+.+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999974 246789999999998 79999999999864321 2345666777888999999999
Q ss_pred cCCCCCCC--------CCcCCCCCceEEEecccC
Q 004242 321 AGNSGPSI--------STVDNTAPWIMTVAASYT 346 (766)
Q Consensus 321 AGN~g~~~--------~~~~~~~p~~itVga~~~ 346 (766)
|||+|... ..++..+||+++||+++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999643 346678999999999864
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=3.1e-22 Score=217.72 Aligned_cols=99 Identities=15% Similarity=0.132 Sum_probs=81.2
Q ss_pred cccccCceEEEeeeecCCCCCHHHHHHHHHHHHh-CCCcEEEeccCCCCC----CCcccHHHHHHHHHHhCCCEEEEecC
Q 004242 248 AGMRYTSRIAAYKACWSLGCSSSDILAAIDKAVA-DGVDVLSLSLGGSSR----PYYRDTVAIASFGATQSGVFVSCSAG 322 (766)
Q Consensus 248 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~~-~g~dVIn~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV~AAG 322 (766)
..+||+++++.|++.+..++..++++++|+||++ ++++|||||||.... ..+.+.+..++..|..+||+||+|+|
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4579999999999987655778899999999998 899999999998542 12345667777788899999999999
Q ss_pred CCCCCCC-------------CcCCCCCceEEEecccC
Q 004242 323 NSGPSIS-------------TVDNTAPWIMTVAASYT 346 (766)
Q Consensus 323 N~g~~~~-------------~~~~~~p~~itVga~~~ 346 (766)
|+|...+ .++..+||+++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997542 45678899999999864
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.00 E-value=1.2e-09 Score=123.70 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=63.5
Q ss_pred ccccCceEEEeeeecCCCCCHHHHHHHHHHHH--hCCCcEEEeccCCCCCC---CcccHHHHHHHHHHhCCCEEEEecCC
Q 004242 249 GMRYTSRIAAYKACWSLGCSSSDILAAIDKAV--ADGVDVLSLSLGGSSRP---YYRDTVAIASFGATQSGVFVSCSAGN 323 (766)
Q Consensus 249 GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~a~--~~g~dVIn~SlG~~~~~---~~~~~~~~a~~~a~~~Gi~vV~AAGN 323 (766)
+++++..++.|-.-+. ......++..+++.. .+-.+|||+|||..... .+.+.+......+..+||.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 4555556555543211 112234555454443 34678999999986442 23344556666788999999999999
Q ss_pred CCCCC----------CCcCCCCCceEEEecccC
Q 004242 324 SGPSI----------STVDNTAPWIMTVAASYT 346 (766)
Q Consensus 324 ~g~~~----------~~~~~~~p~~itVga~~~ 346 (766)
+|... ..++..+||+++||+++.
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 98642 245678999999999864
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.98 E-value=3.1e-10 Score=101.61 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=66.2
Q ss_pred CCCceEEEEeCCCCCcCCCCCccHHHHHHHHHhhhcccccccccccccCCCCcEEEEecceeeEEEEEeCHHHHhhhccC
Q 004242 22 GKQTTYVIHMDKSKIAANHSPGSVRQFYEAVIDSINKFSSQQEDQEQETTPPQILYAYENAISGFSAKLSTKQLKSLETV 101 (766)
Q Consensus 22 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~ 101 (766)
..+++|||+|++...+.. ...|++|+.+++.+. ..+.+++|+|++.|+||+++|+++++++|+++
T Consensus 35 ~ip~~YIV~lk~~~~~~~--~~~h~~~l~s~~~~~-------------~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~ 99 (114)
T 2w2n_P 35 RLPGTYVVVLKEETHLSQ--SERTARRLQAQAARR-------------GYLTKILHVFHGLLPGFLVKMSGDLLELALKL 99 (114)
T ss_dssp EEEEEEEEEECTTCCHHH--HHHHHHHHHHHHHHT-------------TCCCEEEEEECSSSSEEEEECCGGGHHHHHTS
T ss_pred CCCCcEEEEECCCCCHHH--HHHHHHHHHHHhhhc-------------ccCCceEEEecccceEEEEEcCHHHHHHHHcC
Confidence 357899999998775444 456788888876652 24679999999999999999999999999999
Q ss_pred CCeEEEEccccccc
Q 004242 102 DGFLSATPDELLTL 115 (766)
Q Consensus 102 p~V~~v~~~~~~~~ 115 (766)
|+|.+|+|++.++.
T Consensus 100 P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 100 PHVDYIEEDSSVFA 113 (114)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCccEEEeCceEec
Confidence 99999999998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.84 E-value=5.3e-09 Score=87.56 Aligned_cols=74 Identities=15% Similarity=0.205 Sum_probs=57.6
Q ss_pred CCCceEEEEeCCCCCcCCCCCccHHHHHHHHHhhhcccccccccccccCCCCcEEEEecceeeEEEEEeCHHHHhhhccC
Q 004242 22 GKQTTYVIHMDKSKIAANHSPGSVRQFYEAVIDSINKFSSQQEDQEQETTPPQILYAYENAISGFSAKLSTKQLKSLETV 101 (766)
Q Consensus 22 ~~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~ 101 (766)
..+++|||+||++..... ...++++ ..+.++.|+|++ |+||+++++++++++|+++
T Consensus 6 ~i~~~YIV~~k~~~~~~~--------~~~~~~~---------------~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~ 61 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKSCA--------KKEDVIS---------------EKGGKLQKCFKY-VDAASATLNEKAVEELKKD 61 (80)
T ss_dssp --CCEEEEEECTTCCSHH--------HHHHHHH---------------TTTCEEEEECSS-SSEEEEECCHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCChHH--------HHHHHHH---------------HcCCcceEEEcc-cEEEEEEcCHHHHHHHHhC
Confidence 467999999998765321 1112221 245799999998 9999999999999999999
Q ss_pred CCeEEEEcccccccccCC
Q 004242 102 DGFLSATPDELLTLHTTY 119 (766)
Q Consensus 102 p~V~~v~~~~~~~~~~~~ 119 (766)
|+|.+|||++.++++++.
T Consensus 62 p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 62 PSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TTEEEEEECCEEEECCC-
T ss_pred CCccEEEeCcEEEEeeec
Confidence 999999999999887654
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.74 E-value=6.7e-09 Score=94.06 Aligned_cols=78 Identities=15% Similarity=0.135 Sum_probs=58.9
Q ss_pred CCceEEEEeCCCCCcCCCCCccHHHHHHHHHhhhcccccccccccccCCCCcEEEEecceeeEEEEEeCHHHHhhhccCC
Q 004242 23 KQTTYVIHMDKSKIAANHSPGSVRQFYEAVIDSINKFSSQQEDQEQETTPPQILYAYENAISGFSAKLSTKQLKSLETVD 102 (766)
Q Consensus 23 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p 102 (766)
.+++|||+||++..... ...+.+++.+.+.+. ..+.++.|+|++.|+||+++++++++++|+++|
T Consensus 46 Ip~~YIV~~K~~~~~~~--~~~~~~~l~~~~~~r-------------~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p 110 (124)
T 2qtw_A 46 LPGTYVVVLKEETHLSQ--SERTARRLQAQAARR-------------GYLTKILHVFHGLLPGFLVKMSGDLLELALKLP 110 (124)
T ss_dssp EEEEEEEEECTTCCHHH--HHHHHHHHHHHHHHT-------------TCCCEEEEEECSSSCEEEEECCGGGHHHHHTST
T ss_pred CCCCEEEEECCCCCHHH--HHHHHHHHHHHHhhc-------------ccCCceEEEecccceEEEEEcCHHHHHHHHcCC
Confidence 57899999998775433 222333333222211 145799999999999999999999999999999
Q ss_pred CeEEEEccccccc
Q 004242 103 GFLSATPDELLTL 115 (766)
Q Consensus 103 ~V~~v~~~~~~~~ 115 (766)
+|.+|++++.++.
T Consensus 111 ~V~~VE~D~~v~a 123 (124)
T 2qtw_A 111 HVDYIEEDSSVFA 123 (124)
T ss_dssp TEEEEEEEEEEEE
T ss_pred CCcEEEeCceEec
Confidence 9999999987754
No 41
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.67 E-value=1.1e-07 Score=92.26 Aligned_cols=94 Identities=16% Similarity=0.109 Sum_probs=74.8
Q ss_pred CCccccCCCCCCCc-------ccceEEEEecCC-CchhhhhHHHHhcCceEEEEecCCCCcccc----cccCccccEEEE
Q 004242 388 GAEYCINGSLNRKL-------VKGKIVICQRGL-NSRTGKGEQVKLAGGAGMLLLNSDKEGEEL----IADAHVLPAATL 455 (766)
Q Consensus 388 ~~~~c~~~~~~~~~-------~~gkiv~~~~g~-~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~----~~~~~~~p~~~v 455 (766)
....|.+....... .+++|+|++||. |.|.+|..+++++||.++|++|+...+... ......||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 56789887643222 478999999999 999999999999999999999985332211 122357999999
Q ss_pred cHhhHHHHHHHHhcCCCCeEEEEece
Q 004242 456 GASAGKAVKKYVNSTKRPTASIVFKG 481 (766)
Q Consensus 456 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 481 (766)
+..+|+.|++++..+...+++|.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999888777776654
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.42 E-value=1.9e-07 Score=77.05 Aligned_cols=70 Identities=13% Similarity=0.234 Sum_probs=52.9
Q ss_pred ceEEEEeCCCCCcCCCCCccHHHHHHHHHhhhcccccccccccccCCCCcEEEEec-ceeeEEEEEeCHHHHhhhccC--
Q 004242 25 TTYVIHMDKSKIAANHSPGSVRQFYEAVIDSINKFSSQQEDQEQETTPPQILYAYE-NAISGFSAKLSTKQLKSLETV-- 101 (766)
Q Consensus 25 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~-~~~~g~s~~l~~~~~~~L~~~-- 101 (766)
+.|||.||++..... ...+..+ +.. .+.++.|+|+ ..|+||+++++++.+++|+++
T Consensus 3 ~sYIV~lk~~~~~~~--~~~~~~~----~~~---------------~gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~ 61 (76)
T 1v5i_B 3 GKFIVIFKNDVSEDK--IRETKDE----VIA---------------EGGTITNEYNMPGMKGFAGELTPQSLTKFQGLQG 61 (76)
T ss_dssp EEEEEEECTTCCHHH--HHHHHHH----HHH---------------HTCCCCEEEEETTEEEEEEEECHHHHHHHHHTBT
T ss_pred ceEEEEECCCCCHHH--HHHHHHH----HHh---------------hCCceEEEEEcCceeEEEEEcCHHHHHHHHhcCC
Confidence 689999998765332 1122222 211 2357899994 799999999999999999999
Q ss_pred CCeEEEEccccccc
Q 004242 102 DGFLSATPDELLTL 115 (766)
Q Consensus 102 p~V~~v~~~~~~~~ 115 (766)
|.|.+||+++.+++
T Consensus 62 p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 62 DLIDSIEEDHVAHA 75 (76)
T ss_dssp TTEEEEEECCEEEC
T ss_pred CCCcEEcCCcEEeC
Confidence 89999999987754
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.34 E-value=0.00024 Score=56.36 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=39.8
Q ss_pred CCCcEEEEecceeeEEEEEeCHHHHhhhccCCCeEEEEcccccc
Q 004242 71 TPPQILYAYENAISGFSAKLSTKQLKSLETVDGFLSATPDELLT 114 (766)
Q Consensus 71 ~~~~~~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~v~~~~~~~ 114 (766)
.+.++.|+|. .+++++++|+++.+++|+++|+|++|++|...+
T Consensus 21 ~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 21 IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred CCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 5789999997 799999999999999999999999999998754
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.68 E-value=0.013 Score=64.47 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=66.0
Q ss_pred CceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCccc--cc-ccCcc
Q 004242 373 SKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEGEE--LI-ADAHV 449 (766)
Q Consensus 373 ~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~--~~-~~~~~ 449 (766)
...-++|+.+.+. ...+...+++||||++.++.|.+.+|..+++++||.|+|++++...... .. .....
T Consensus 92 ~v~a~lv~~~~G~--------~~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~ 163 (421)
T 2ek8_A 92 DVTAELVYVGLGT--------TADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASF 163 (421)
T ss_dssp EEEEEEEECTTCC--------TTTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTC
T ss_pred CcceEEEECCCCC--------hhhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCC
Confidence 3455677755431 1122234899999999999999999999999999999999998643111 11 13467
Q ss_pred ccEEEEcHhhHHHHHHHHh
Q 004242 450 LPAATLGASAGKAVKKYVN 468 (766)
Q Consensus 450 ~p~~~v~~~~g~~l~~~~~ 468 (766)
+|.+.++..+++.|.+++.
T Consensus 164 IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 164 VAAVGITKQEGDALAANLR 182 (421)
T ss_dssp CEEEEECHHHHHHHHHHHH
T ss_pred ccEEEeCHHHHHHHHHHhh
Confidence 9999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.82 E-value=0.034 Score=61.55 Aligned_cols=101 Identities=12% Similarity=0.152 Sum_probs=70.6
Q ss_pred CceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCc---------hhhh----hHHHHhcCceEEEEecCCCC
Q 004242 373 SKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNS---------RTGK----GEQVKLAGGAGMLLLNSDKE 439 (766)
Q Consensus 373 ~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~~~~~~ 439 (766)
...-++|+... .+.|.. ....+++|||||+.++.|. +..| ..+|.++||.|+|++++...
T Consensus 105 ~vta~lV~v~~-----~~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~ 177 (444)
T 3iib_A 105 GLSATIVRFDT-----LQDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTD 177 (444)
T ss_dssp CEEEEEEEESS-----HHHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSC
T ss_pred CeEEEEEecCC-----HHHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCc
Confidence 45677887542 223332 2356899999999998874 3444 35689999999999986543
Q ss_pred cc--------cccccCccccEEEEcHhhHHHHHHHHhcCCCCeEEEEec
Q 004242 440 GE--------ELIADAHVLPAATLGASAGKAVKKYVNSTKRPTASIVFK 480 (766)
Q Consensus 440 ~~--------~~~~~~~~~p~~~v~~~~g~~l~~~~~~~~~~~~~i~~~ 480 (766)
.. ........+|++.++..+++.|+..+..+...++.+...
T Consensus 178 ~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 178 HDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp CSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEE
T ss_pred ccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEe
Confidence 21 111234579999999999999999998876666665543
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.19 E-value=0.027 Score=64.87 Aligned_cols=90 Identities=17% Similarity=0.167 Sum_probs=64.4
Q ss_pred CceeeeEEccCCCCCCCccccCCCCCCCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCCc------------
Q 004242 373 SKQLPLVFGKTAGVSGAEYCINGSLNRKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKEG------------ 440 (766)
Q Consensus 373 ~~~~~lv~~~~~~~~~~~~c~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~~------------ 440 (766)
....++||.+.+... .. ..+. .+++|||+|+.+|.|.+.+|..+|+++||.|+|++++....
T Consensus 107 ~v~g~lV~vg~G~~~---D~--~~l~-vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~ 180 (640)
T 3kas_A 107 TVTGKLVHANFGTKK---DF--EDLY-TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGH 180 (640)
T ss_dssp EEEECEEECTTCCHH---HH--HTCS-SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEE
T ss_pred ceEEEEEEecCCChh---hH--HHhh-cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccc
Confidence 345678887643210 00 0111 58999999999999999999999999999999999876421
Q ss_pred ------cccc----------------ccCccccEEEEcHhhHHHHHHHHh
Q 004242 441 ------EELI----------------ADAHVLPAATLGASAGKAVKKYVN 468 (766)
Q Consensus 441 ------~~~~----------------~~~~~~p~~~v~~~~g~~l~~~~~ 468 (766)
+... .....+|+..|+..+++.|...+.
T Consensus 181 ~~~~~Gdp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 181 AHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCSSSSCSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEE
T ss_pred cccCCCCCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHcc
Confidence 0000 012368999999999999987764
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.75 E-value=0.022 Score=66.32 Aligned_cols=71 Identities=25% Similarity=0.426 Sum_probs=56.8
Q ss_pred CCcccceEEEEecCCCchhhhhHHHHhcCceEEEEecCCCC-------------------------------cccccc--
Q 004242 399 RKLVKGKIVICQRGLNSRTGKGEQVKLAGGAGMLLLNSDKE-------------------------------GEELIA-- 445 (766)
Q Consensus 399 ~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~~~~~~-------------------------------~~~~~~-- 445 (766)
..+++|||+|+++|.|.+.+|..+|+++||.|+|++++..+ |+...+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 35799999999999999999999999999999999986321 110000
Q ss_pred ---------------cCccccEEEEcHhhHHHHHHHHhc
Q 004242 446 ---------------DAHVLPAATLGASAGKAVKKYVNS 469 (766)
Q Consensus 446 ---------------~~~~~p~~~v~~~~g~~l~~~~~~ 469 (766)
....||++.|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 124789999999999999998764
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.00 E-value=0.34 Score=43.07 Aligned_cols=72 Identities=22% Similarity=0.275 Sum_probs=52.4
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCCeEEEEEEE-CCceeEEeE
Q 004242 682 MSLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSLRGASNESFGSLTWV-SGKYAVKSP 760 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~-~~~~~v~~p 760 (766)
.+.+.++.|+|+|+.+..|+.....| +++.|..-++.+ |++..++|+|.+... +.+.+.|... ++...+.++
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L~p-g~~~~i~V~F~P~~~--g~~~~~l~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTLNV-GESMQLEVEFEPQSV--GDHSGRLIVCYDTGEKVFVS 113 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEECT-TCEEEEEEEECCSSS--BCCCCBCEEEESSSCEECCE
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEECC-CCEEEEEEEEEcCCC--ccEEEEEEEEECCCCEEEEE
Confidence 47888999999999888887765433 778999999987 999999999998631 2255655544 443444433
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.25 E-value=0.21 Score=61.37 Aligned_cols=25 Identities=20% Similarity=0.464 Sum_probs=22.8
Q ss_pred cCCCCCCcEEEEEecccCCCCCCCc
Q 004242 135 ATNLAKDVIVGVIDTGIWPEHIAFQ 159 (766)
Q Consensus 135 ~~~~G~gv~VaVIDtGid~~Hp~f~ 159 (766)
-.|.|+||+|||+|||||+.+|.|.
T Consensus 31 P~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 31 PEYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TTCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCCccEEEEEeCCCCCCCCcce
Confidence 3678999999999999999999985
No 50
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=84.30 E-value=6.5 Score=34.41 Aligned_cols=55 Identities=18% Similarity=0.208 Sum_probs=45.1
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEec
Q 004242 682 MSLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSLR 738 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 738 (766)
-.-.++..+.|....+.+|.+++...+|+.+. .|..+++.+ ++..++.|.+.++.
T Consensus 31 I~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v~~-g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 31 VENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQVEP-GEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEECT-TCEEEEEEEEEECG
T ss_pred EEEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEECC-CCEEEEEEEEEECh
Confidence 45677889999999999999999987776553 356688877 99999999999865
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=82.37 E-value=0.87 Score=50.12 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=26.4
Q ss_pred CCCCccccccCCCCCCCCCCcccCcEEeCCCcEEeecCC
Q 004242 486 NPAPVIASFSSRGPSLVGHDVIKPDVTAPGVNILAAWPA 524 (766)
Q Consensus 486 ~~~~~~a~fSs~Gp~~~~~~~lKPDI~APG~~I~sa~~~ 524 (766)
...+.++.||++||.. ||+|||++|+++++.
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 3456899999999865 999999999999874
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.43 E-value=2.5 Score=36.48 Aligned_cols=66 Identities=12% Similarity=0.126 Sum_probs=47.3
Q ss_pred eEEEEEEEEecCCCCeEEEEEEe-CCCceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCCeEEEEEEE
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVE-EPNGVLVTITPPILSFQKIGEILSYKVTFVSLRGASNESFGSLTWV 751 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~-~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~~~G~~~~~ 751 (766)
..+.+.+++|.|+.+..|+.... .+.+...+++|..=.+.+ |++++++|+|.+.. . +...=.|++.
T Consensus 27 ~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i~p-g~~~~i~V~f~~~~-~-g~f~~~i~v~ 93 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGIIEP-SGVQAIQISFSSII-L-GNFEEEFLVN 93 (112)
T ss_dssp CEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEECT-TBCCEEEEEECCCC-C-EEEEEEECEE
T ss_pred EEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEECC-CCEEEEEEEEECCC-c-ceEEEEEEEE
Confidence 67778999999999999888321 111234777999988887 99999999999853 1 2233445554
No 53
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=68.62 E-value=22 Score=32.06 Aligned_cols=82 Identities=10% Similarity=0.020 Sum_probs=57.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeC----CCceEEEEeCCeEEEeecceEEEEEEEEEEecC-----CCC-C-eEEEEEEE
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVEE----PNGVLVTITPPILSFQKIGEILSYKVTFVSLRG-----ASN-E-SFGSLTWV 751 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~~----p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~-----~~~-~-~~G~~~~~ 751 (766)
..+.+++|+|.|.-+.+|++.... ...--++++|..=++.+ |++.++.|++.+... ..+ . ..--|++.
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L~P-ge~~~I~v~~~v~~~~~~~ln~g~~~l~diLvL~ 122 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 122 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCHHHHHHHHHSSSCSCEEEEEE
T ss_pred eeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCcccccCC-CCeeEEEEEEEEccCcccccccchhhhheeEEEE
Confidence 567788999999999999997431 11123566899988887 999999999997431 112 2 56667765
Q ss_pred -CCceeEEeEEEEEe
Q 004242 752 -SGKYAVKSPIAVTW 765 (766)
Q Consensus 752 -~~~~~v~~p~~v~~ 765 (766)
.++..-.+|+--.|
T Consensus 123 Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 123 LDRGKDYFLTISGNY 137 (140)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred eecCCcEEEEEeccc
Confidence 46666678876655
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=66.68 E-value=25 Score=34.24 Aligned_cols=66 Identities=17% Similarity=0.009 Sum_probs=45.8
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCC-eEEEEEEE
Q 004242 682 MSLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSLRGASNE-SFGSLTWV 751 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~-~~G~~~~~ 751 (766)
...+.+++++|.|+.+.+++... .|+-+++...| -.+.+ |++.+++|+++......-. ..+.|+..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~--~~I~P-G~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRA--FRLQA-REPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCE--EEECS-SSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCc--ceeCC-CCceEEEEEEcchhcccCCceeeEEEEE
Confidence 35667889999999988877643 36666654444 44555 9999999999986643333 55667765
No 55
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=58.95 E-value=3.3 Score=36.46 Aligned_cols=56 Identities=25% Similarity=0.240 Sum_probs=38.9
Q ss_pred eEEEEEEEEecCCCCeEEEEEEe-CCCceEEEEeCCeEEEee-cceEEEEEEEEEEec
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVE-EPNGVLVTITPPILSFQK-IGEILSYKVTFVSLR 738 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~-~p~g~~v~v~p~~~~~~~-~~~~~~~~vt~~~~~ 738 (766)
...+..-|+|.+.+..+..+.+. -|.|+++++.|..+++.- .-.+++|.|++....
T Consensus 54 ~i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~g 111 (119)
T 2kq1_A 54 SYEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEMIN 111 (119)
T ss_dssp CCEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCCCC
T ss_pred CEEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEECC
Confidence 45556667777765555566666 799999999999887763 245677777766543
No 56
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=58.73 E-value=15 Score=42.61 Aligned_cols=54 Identities=15% Similarity=0.155 Sum_probs=36.1
Q ss_pred eeEEEEEEEEecCCCCeEEEEEE--eCCCceEEEEeCC-------eEEEeecceEEEEEEEEEEec
Q 004242 682 MSLEYERSVTNVGTSYCTYAVKV--EEPNGVLVTITPP-------ILSFQKIGEILSYKVTFVSLR 738 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~ty~~~v--~~p~g~~v~v~p~-------~~~~~~~~~~~~~~vt~~~~~ 738 (766)
...+++++|||+|+..-.-.+.+ ..|.+. + ..|. .+.+.+ ||+++++++|+...
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~-~-~~P~k~L~gF~kv~L~p-Ges~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSA-P-RTPPKQLRGFAKLNLTP-GQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTS-S-SCCSCEEEEEEEEEECT-TCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCC-C-CchhHHhhhcccceeCC-CCeEEEEEEEcHHH
Confidence 46889999999998776655554 445431 1 1222 234555 99999999998753
No 57
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=51.05 E-value=62 Score=28.54 Aligned_cols=51 Identities=25% Similarity=0.199 Sum_probs=34.2
Q ss_pred eeEEEEEEEEecCCCC-eEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEE
Q 004242 682 MSLEYERSVTNVGTSY-CTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVS 736 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~-~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~ 736 (766)
...+++++|+|.|... ..|++.+.. .|..+.-.+ ..+.+ |++++|++++..
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~~--v~La~-G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNWT--VSLGP-KEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEEE--EEECT-TCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeEE--eccCC-CCeEEEEEEEEc
Confidence 5899999999999755 557777643 444443332 34555 888887777653
No 58
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=50.41 E-value=73 Score=35.82 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=43.6
Q ss_pred CCceeeeccCCccceeEEEEEEEEecCCCCeEE-EEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEecC
Q 004242 668 YPSFAVNFKGNVKNMSLEYERSVTNVGTSYCTY-AVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSLRG 739 (766)
Q Consensus 668 ~ps~~~~~~~~~~~~~~~~~rtvtn~g~~~~ty-~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~ 739 (766)
.|.+++.-. .+.+++.+|+|-+..+..- ++++..|.+.+++. ....+.+ |++.+++++|+....
T Consensus 364 ~~~~~~~~g-----~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~t~~~~vt~~~~ 428 (601)
T 1w8o_A 364 IPDVALEPG-----QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPLMP-GRQAKGQVTITVPAG 428 (601)
T ss_dssp CCCEEECTT-----CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCBCT-TCEEEEEEEEECCTT
T ss_pred CccceecCC-----ceeEEEEEEECCCceeccCceEEEecCCCcEEec--cccccCC-CCceEEEEEEecCCC
Confidence 466665422 4789999999976543322 45577799988876 3445555 899999888888653
No 59
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=49.97 E-value=30 Score=36.63 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=54.8
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCceE----EEEeCCeEEEeecceEEEEEEEEEEecCC-----CCC--eEEEEEEE
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVEEPNGVL----VTITPPILSFQKIGEILSYKVTFVSLRGA-----SNE--SFGSLTWV 751 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~~p~g~~----v~v~p~~~~~~~~~~~~~~~vt~~~~~~~-----~~~--~~G~~~~~ 751 (766)
..+-+.||+|.|.-+.+|++.-....... ++++|..-++.+ |++.++.|++.+.... .+. .+--|++.
T Consensus 47 ~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l~P-ge~~~i~l~~~v~~~~~~~ln~g~~~l~diLvL~ 125 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYLEP-NETVDISLDVYVSKDSVTILNSGEDKIEDILVLH 125 (366)
T ss_dssp CEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEECT-TCEEEEEEEECBCTTTHHHHHHTSSCSCEEEEEE
T ss_pred eEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEECC-CCEEEEEEEEEECHHHHHHHhcCccccceEEEEE
Confidence 56778899999999999998643222211 667899888877 9999999999886510 012 45556654
Q ss_pred -CCceeEEeEEEEEe
Q 004242 752 -SGKYAVKSPIAVTW 765 (766)
Q Consensus 752 -~~~~~v~~p~~v~~ 765 (766)
.++....+|+-..|
T Consensus 126 ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 126 LDRGKDYFLTISGNY 140 (366)
T ss_dssp ETTSCEEEEEEEEEE
T ss_pred EeCCCcEEEEecccc
Confidence 34555555655443
No 60
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=42.31 E-value=1.1e+02 Score=26.79 Aligned_cols=53 Identities=11% Similarity=0.142 Sum_probs=36.8
Q ss_pred eeEEEEEEEEecCCCCeE--------EEEEEeCCCceEEEEe---------CCeEEEeecceEEEEEEEEE
Q 004242 682 MSLEYERSVTNVGTSYCT--------YAVKVEEPNGVLVTIT---------PPILSFQKIGEILSYKVTFV 735 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~t--------y~~~v~~p~g~~v~v~---------p~~~~~~~~~~~~~~~vt~~ 735 (766)
....++.+|+|.++.+.+ |.+.+....|-.|--- ....++.+ |++++|..++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~p-GE~~~f~~~w~ 87 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLES-GETYDFSDVWK 87 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECT-TCEEEEEEEES
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECC-CCEEEEEEEeC
Confidence 488999999999986643 4555555556544411 22456666 99999999998
No 61
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=42.26 E-value=51 Score=39.03 Aligned_cols=44 Identities=20% Similarity=0.191 Sum_probs=34.3
Q ss_pred ceEEeecccchhhhhhhHHHHHHhhCCCCC-HHHHHHHHHhcccc
Q 004242 539 LFNIISGTSMSCPHVSGLAALLKSVHEDWS-TAAIKSALMTTAYT 582 (766)
Q Consensus 539 ~y~~~sGTSmAaP~VAG~aALl~~~~P~~s-~~~ik~~L~~TA~~ 582 (766)
-...++|..++-|.+.-+.|+|..++|..- ...|-++|.--..|
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 346778888888888888999999998775 57788888765554
No 62
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=38.33 E-value=96 Score=28.20 Aligned_cols=52 Identities=17% Similarity=0.179 Sum_probs=42.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEe
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSL 737 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (766)
..+-.++|+|..+....|++.-++|.- ..|.|..=.+.+ +++.+++|++...
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI~P-~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSCDP-GASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEECT-TCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEECC-CCeEEEEEEecCc
Confidence 445688999999999999999889975 556888776666 9999999999864
No 63
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=36.67 E-value=91 Score=27.01 Aligned_cols=50 Identities=10% Similarity=0.054 Sum_probs=39.9
Q ss_pred EEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEe
Q 004242 685 EYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSL 737 (766)
Q Consensus 685 ~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (766)
+.+.+|+|.++....|++.-+.|.-. .|+|..=.+.+ |++.++.|+..+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT~p~~Y--rVrP~~G~I~P-g~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSSNNEHY--RVRPVYGFVDA-KGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEESCTTTE--EEECSEEEECT-TCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEecCCCce--EEcCCceEECC-CCeEEEEEEeCCC
Confidence 56788999999999999988888764 46787655555 9999999988864
No 64
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=36.28 E-value=83 Score=27.56 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=42.6
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEe
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSL 737 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (766)
..+-.++|+|.++....|++.-++|.- ..|.|..=.+.+ +++..+.|++...
T Consensus 28 ~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i~P-~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 28 VVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVIDP-GSIVTVSVMLQPF 79 (128)
T ss_dssp CEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEECT-TCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEECC-CCeEEEEEEECcC
Confidence 567789999999999999999888875 456888766655 9999999998874
No 65
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=35.72 E-value=25 Score=26.62 Aligned_cols=36 Identities=14% Similarity=0.047 Sum_probs=27.8
Q ss_pred cchhhhhhhHHHHHHhhCCCCCHHHHHHHHHhcccc
Q 004242 547 SMSCPHVSGLAALLKSVHEDWSTAAIKSALMTTAYT 582 (766)
Q Consensus 547 SmAaP~VAG~aALl~~~~P~~s~~~ik~~L~~TA~~ 582 (766)
|-..|..--.+..|++.+|+++...|+..|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 334444556678899999999999999999876544
No 66
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=33.38 E-value=1.1e+02 Score=25.59 Aligned_cols=16 Identities=19% Similarity=0.059 Sum_probs=13.3
Q ss_pred eEEEEEEEEecCCCCe
Q 004242 683 SLEYERSVTNVGTSYC 698 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ 698 (766)
..+++++|+|.|+.+-
T Consensus 19 r~~~~l~V~NtGDRPI 34 (101)
T 4ep8_B 19 RATCRVVVENHGDRPI 34 (101)
T ss_dssp CCEEEEEEEECSSSCE
T ss_pred CCEEEEEEEeCCCcce
Confidence 5678899999999863
No 67
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=33.24 E-value=1.6e+02 Score=25.07 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=40.0
Q ss_pred EEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEe
Q 004242 685 EYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSL 737 (766)
Q Consensus 685 ~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (766)
+-+.+|+|..+....|++.-+.|.- ..|+|..=.+.+ |++.++.|+....
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I~P-~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFVDP-SGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEECT-TEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEECC-CCeEEEEEEeCCC
Confidence 3578899999999999999888876 456787665555 9999999988863
No 68
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.08 E-value=1.1e+02 Score=27.48 Aligned_cols=52 Identities=15% Similarity=0.240 Sum_probs=42.2
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEEe
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVSL 737 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (766)
..+-.++|+|.++....|++.-++|.- ..|.|..=.+.+ +++..+.|++...
T Consensus 32 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI~P-~~s~~v~V~l~~~ 83 (147)
T 2cri_A 32 VVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGIIDP-GSIVTVSVMLQPF 83 (147)
T ss_dssp CCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEECCT-TCEEEEEEEECCC
T ss_pred eEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEECC-CCeEEEEEEECCC
Confidence 456678999999999999999999986 456888655555 9999999998874
No 69
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=31.27 E-value=1e+02 Score=26.94 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=41.7
Q ss_pred eEEEEEEEEecCCCCeEEEEEEeCCCceEEEEeCCeEEEeecceEEEEEEEEEE
Q 004242 683 SLEYERSVTNVGTSYCTYAVKVEEPNGVLVTITPPILSFQKIGEILSYKVTFVS 736 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~v~~p~g~~v~v~p~~~~~~~~~~~~~~~vt~~~ 736 (766)
..+-..+|+|.++....|++.-++|.-. .|.|..=.+.+ +++..+.|++..
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~y--~VrP~~Gii~P-~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRRL--SVDPPCGVLDP-KEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTTE--EEESCEEEECT-TCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCcE--EEECCCeEECC-CCEEEEEEEecC
Confidence 3455788999999999999998888864 56888766666 999999998887
No 70
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=30.91 E-value=52 Score=38.26 Aligned_cols=70 Identities=17% Similarity=0.193 Sum_probs=41.8
Q ss_pred CCCCCceeeeccCCc-cceeEEEEEEEEecCCCCeEEEEEE--eCCCceEEEEeCC-------eE-EEeecceEEEEEEE
Q 004242 665 KLNYPSFAVNFKGNV-KNMSLEYERSVTNVGTSYCTYAVKV--EEPNGVLVTITPP-------IL-SFQKIGEILSYKVT 733 (766)
Q Consensus 665 ~ln~ps~~~~~~~~~-~~~~~~~~rtvtn~g~~~~ty~~~v--~~p~g~~v~v~p~-------~~-~~~~~~~~~~~~vt 733 (766)
-|.|-+|....+.-. .....+++++|||+|+..-.-.+.+ ..|.+- +. .|. .+ .+. +||+++++++
T Consensus 597 GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~-~~-~P~k~L~gF~kv~~L~-pGes~~V~~~ 673 (721)
T 2x41_A 597 GLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGK-ID-KPFQELKAFHKTRLLN-PGESEEVVLE 673 (721)
T ss_dssp CBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSS-SC-CCSCEEEEEEECCCBC-TTCEEEEEEE
T ss_pred CCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCC-CC-CchHHhhcccccccCC-CCCeEEEEEE
Confidence 466666655443210 0146899999999998665544443 444321 11 232 23 334 4999999999
Q ss_pred EEEe
Q 004242 734 FVSL 737 (766)
Q Consensus 734 ~~~~ 737 (766)
|+..
T Consensus 674 l~~~ 677 (721)
T 2x41_A 674 IPVR 677 (721)
T ss_dssp EEGG
T ss_pred ECHH
Confidence 9874
No 71
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=25.86 E-value=3.3e+02 Score=26.99 Aligned_cols=66 Identities=12% Similarity=0.186 Sum_probs=43.7
Q ss_pred eEEEEEEEEecCCCCeEEEEE--EeCCC--------ceEEEEeCCeEEEeecceEEEEEEEEEEecCCCCC-eEEEEEEE
Q 004242 683 SLEYERSVTNVGTSYCTYAVK--VEEPN--------GVLVTITPPILSFQKIGEILSYKVTFVSLRGASNE-SFGSLTWV 751 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ty~~~--v~~p~--------g~~v~v~p~~~~~~~~~~~~~~~vt~~~~~~~~~~-~~G~~~~~ 751 (766)
....+++|+|.++. .|-+. ++... ..-+.++|..+.+.+ |+++.+.|.......|.+. .-=||.+.
T Consensus 43 ~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~p-g~~q~lRI~~~~~~LP~DrESlf~lnv~ 119 (257)
T 3q48_A 43 EREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEP-NGGAVLRIAYLKAPLPTDRESLFWLNIL 119 (257)
T ss_dssp CSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECT-TEEEEEEEEECCCCCCSSSCEEEEEEEE
T ss_pred CcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECC-CCceEEEEEECCCCCCCCceeEEEEEee
Confidence 45678899998875 45554 34221 234889999999987 9999999976654345444 33345554
No 72
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=25.28 E-value=84 Score=27.43 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=13.3
Q ss_pred eEEEEEEEEecCCCCe
Q 004242 683 SLEYERSVTNVGTSYC 698 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ 698 (766)
..+++++|+|.|+.+.
T Consensus 25 r~~~~l~V~NtGDRPI 40 (126)
T 4ac7_B 25 REKTTIRVSNTGDRPI 40 (126)
T ss_dssp SCEEEEEEEECSSSCE
T ss_pred CcEEEEEEEeCCCCCE
Confidence 5678899999999863
No 73
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=25.28 E-value=84 Score=27.43 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=13.3
Q ss_pred eEEEEEEEEecCCCCe
Q 004242 683 SLEYERSVTNVGTSYC 698 (766)
Q Consensus 683 ~~~~~rtvtn~g~~~~ 698 (766)
..+++++|+|.|+.+.
T Consensus 25 r~~~~l~V~NtGDRPI 40 (126)
T 4ubp_B 25 REKTTIRVSNTGDRPI 40 (126)
T ss_dssp SCEEEEEEEECSSSCE
T ss_pred CcEEEEEEEeCCCCCE
Confidence 5678899999999863
No 74
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=25.08 E-value=2e+02 Score=27.52 Aligned_cols=53 Identities=11% Similarity=0.045 Sum_probs=35.9
Q ss_pred eeEEEEEEEEecCCCCeEEEEEEeCCCce-EEEEeCCeEEEeecceEEEEEEEEEEec
Q 004242 682 MSLEYERSVTNVGTSYCTYAVKVEEPNGV-LVTITPPILSFQKIGEILSYKVTFVSLR 738 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~ty~~~v~~p~g~-~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 738 (766)
...+.+++++|.|+.+...+ .+...-|. .+.. ..-.+.+ |++.++.|+++...
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~~~~--~~~~i~P-Ge~~~i~v~~~~~~ 187 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALTAVP--DRTEIKP-GGSTLLRIAVDPQV 187 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEEEEE--SCSEECT-TCEEEEEEEECHHH
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEeeec--CCccCCC-CCEEEEEEEEecCC
Confidence 36778899999999887653 33334443 3333 3334555 99999999999754
No 75
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=24.37 E-value=48 Score=30.43 Aligned_cols=30 Identities=30% Similarity=0.329 Sum_probs=26.0
Q ss_pred ecccchhhhhhhHHHHHHhhCCCCCHHHHHH
Q 004242 544 SGTSMSCPHVSGLAALLKSVHEDWSTAAIKS 574 (766)
Q Consensus 544 sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~ 574 (766)
.|-| =|++|-|++|||.+.+-..+|++|.+
T Consensus 80 ~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 80 FGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp EEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred eeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 3444 48999999999999999999999875
No 76
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=21.66 E-value=85 Score=25.90 Aligned_cols=27 Identities=30% Similarity=0.335 Sum_probs=19.8
Q ss_pred EEEEeCCeEEEeecceEEEEEEEEEEec
Q 004242 711 LVTITPPILSFQKIGEILSYKVTFVSLR 738 (766)
Q Consensus 711 ~v~v~p~~~~~~~~~~~~~~~vt~~~~~ 738 (766)
.|++.|..+++.. |++..++.++.+.+
T Consensus 8 ~i~l~~~~~~l~v-G~t~~L~atv~P~~ 34 (91)
T 2l04_A 8 GMTVTPASTSVVK-GQSTTLTVAFQPEG 34 (91)
T ss_dssp CEEEECCCEEEET-TCEEEEEEEECCSS
T ss_pred EEEEeCCceEEEc-CCEEEEEEEEeccc
Confidence 3566788888876 88888888877654
No 77
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=21.04 E-value=46 Score=30.01 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=27.7
Q ss_pred EEeecccchhhhhhhHHHHHHhhCCCCCHHHHHH
Q 004242 541 NIISGTSMSCPHVSGLAALLKSVHEDWSTAAIKS 574 (766)
Q Consensus 541 ~~~sGTSmAaP~VAG~aALl~~~~P~~s~~~ik~ 574 (766)
-.+.|-| =|++|-|++||+.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 48999999999999999999999875
No 78
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=20.88 E-value=3.9e+02 Score=28.15 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=33.0
Q ss_pred eeEEEEEEEEecCCCCeEE----EEEE--eC----------CCceE----EEEeCCeEEEeecceEEEEEEEEEEe
Q 004242 682 MSLEYERSVTNVGTSYCTY----AVKV--EE----------PNGVL----VTITPPILSFQKIGEILSYKVTFVSL 737 (766)
Q Consensus 682 ~~~~~~rtvtn~g~~~~ty----~~~v--~~----------p~g~~----v~v~p~~~~~~~~~~~~~~~vt~~~~ 737 (766)
.+.+++.+|||.|+++... ++.+ .. |..+. ++ +|+ -+.+ ||+++++|+++-.
T Consensus 298 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~--pI~P-GETrt~~V~a~da 369 (419)
T 3rfr_A 298 RELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD--VIAP-GESKEIVVKIQDA 369 (419)
T ss_dssp SEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC--CBCT-TCEEEEEEEEECH
T ss_pred cEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC--CcCC-CcceEEEEEeehH
Confidence 5889999999999987531 1111 11 22111 34 565 4445 9999999998853
Done!