BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004244
(766 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/741 (67%), Positives = 615/741 (82%), Gaps = 6/741 (0%)
Query: 20 IHRSLSTL-SATADAVIADKALTLLKRHPYQLNSLSSEFTPEAAFNLLLKTQSDQTLTLK 78
I RSLST S+ +D+++ADKALT LKRHPYQL+ LS+ FTPEAA NLLLK+Q+DQ L LK
Sbjct: 8 IRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILK 67
Query: 79 FLKWAQPQPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDD-GNFVFSCLKETY 137
FL WA P FFT + KC+TLHILTKFKLYK+AQ LA+++A D+ + VF L+ETY
Sbjct: 68 FLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETY 127
Query: 138 HLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRN 197
LC STSS V DLVVKSYS L++IDKA++IV+LA+ HGFMPGVLSYNA+LD+ IRS RN
Sbjct: 128 DLCYSTSS--VFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 198 NWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTY 257
+ FAE V+ EM +S+VSPNV+TYN+LIRGFC G++++ L F +ME CL NVVTY
Sbjct: 186 --ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTY 243
Query: 258 NTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISR 317
NTLIDGYCKL +IDD FKLLR M LKG+EPNLISYNV+INGLC+EGR+KE +L E++R
Sbjct: 244 NTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 318 KGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNR 377
+G DEVTYNTL+ GYCKEGN HQALV+HAEM+R+GL+P+V+TYTSLI+SMCK+GN+NR
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 378 AMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIK 437
AMEF DQM VR L PNE+TYTTL++GFSQ G+++EAYR+L EM NGF PS+VTYNALI
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 438 GHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLP 497
GHC G++EDA+ VL M KGL+PDVVSYST++SGF RS ++D+A KREMVEKG+ P
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 498 DTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLH 557
DTITYSSLI G CEQRR EAC+L++EML G+ PDEFTYT LINAYC EGD+ +AL+LH
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 558 DEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNI 617
+EM++KG LPDVVTYSVLINGLNKQ+RT EAK+LLLKLFY+ESVPSDV Y+TLIENC+NI
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 618 EFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLY 677
EF++V +L+KGFCMKG+M EAD+VFE ML +NH P+ Y+I+IHGH + G+++KAY LY
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 678 KKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKE 737
K+MV+SGF+ HTVT+I LVKALH G EL+ VI ++LRSC LS+AE AKVLVEINH+E
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHRE 723
Query: 738 GNMDAVLNVLTEMAKDGLLPN 758
GNMD VL+VL EMAKDG LPN
Sbjct: 724 GNMDVVLDVLAEMAKDGFLPN 744
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 53/390 (13%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+++A+ ++ +V G P +Y ++D + G ++ A V EM + SP+V T
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG---YMNEAYRVLREMNDNGFSPSVVT 417
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
YN LI G C G +E + +M++ +VV+Y+T++ G+C+ +D+A ++ R+M
Sbjct: 418 YNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMV 477
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
KGI+P+ I+Y+ +I G C++ R KE + E+ R GL PDE TY L+N YC EG+L
Sbjct: 478 EKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLE 537
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSM-------------------------------- 369
+AL LH EMV G+ P+VVTY+ LIN +
Sbjct: 538 KALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI 597
Query: 370 ------------------CKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLD 411
C G + A + F+ M + +P+ Y +I+G + G +
Sbjct: 598 ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 412 EAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTII 471
+AY L EM K+GF+ VT AL+K G+V + V+ + R + ++
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLV 717
Query: 472 SGFSRSQELDKAFDTKREMVEKGVLPDTIT 501
R +D D EM + G LP+ I+
Sbjct: 718 EINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 232/724 (32%), Positives = 355/724 (49%), Gaps = 62/724 (8%)
Query: 75 LTLKFLKWAQPQPFFTP----KLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDDGNFVF 130
L LKFLKW QP +L C+T HIL + ++Y A+ + + L+ L +FVF
Sbjct: 52 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELS--LMSGKSSFVF 109
Query: 131 SCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDS 190
L TY LC+S S V D++++ Y MI ++ I L ++GF P V + NAIL S
Sbjct: 110 GALMTTYRLCNSNPS--VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGS 167
Query: 191 VIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNC 250
V++SG + V EM K ++ P+V T+N+LI C G E +MEK+
Sbjct: 168 VVKSGEDVSV---WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGY 224
Query: 251 LANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKG 310
+VTYNT++ YCK GR A +LL M KG++ ++ +YN++I+ LC+ R+ +
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 311 ILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMC 370
+L ++ ++ + P+EVTYNTL+NG+ EG + A L EM+ GLSPN VT+ +LI+
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 371 KSGNLNRAMEFFDQMHVRELRPNEK----------------------------------- 395
GN A++ F M + L P+E
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI 404
Query: 396 TYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGM 455
TYT +I+G ++GFLDEA LLNEM+K+G P IVTY+ALI G C GR + A ++ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 456 ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRI 515
R GL+P+ + YST+I R L +A M+ +G D T++ L+ LC+ ++
Sbjct: 465 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 524
Query: 516 TEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVL 575
EA E + M S G+ P+ ++ LIN Y G+ +A + DEM + G P TY L
Sbjct: 525 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSL 584
Query: 576 INGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLM 635
+ GL K EA+K L L + V+YNT LL C G +
Sbjct: 585 LKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT---------------LLTAMCKSGNL 629
Query: 636 NEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKM-VRSGFVPHTVTIIV 694
+A +F M+QR+ +P+ Y +I G + G A K+ R +P+ V
Sbjct: 630 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTC 689
Query: 695 LVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDG 754
V + AG + E + D +++ + G ++ ++L EM
Sbjct: 690 FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749
Query: 755 LLPN 758
PN
Sbjct: 750 GGPN 753
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 194/669 (28%), Positives = 319/669 (47%), Gaps = 69/669 (10%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
V+ Y A+ +++ K G V +YN ++ + RS R + + +M
Sbjct: 234 VLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNR---IAKGYLLLRDMR 290
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
K + PN TYN LI GF G + + + +EM N VT+N LIDG+ G
Sbjct: 291 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 350
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A K+ M KG+ P+ +SY V+++GLCK +G + R G+ +TY ++
Sbjct: 351 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 410
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+G CK G L +A+VL EM ++G+ P++VTY++LIN CK G A E +++ L
Sbjct: 411 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLS 470
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
PN Y+TLI + G L EA R+ M G T+N L+ C G+V +A
Sbjct: 471 PNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEF 530
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
+ M G+ P+ VS+ +I+G+ S E KAF EM + G P TY SL+ GLC+
Sbjct: 531 MRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCK 590
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
+ EA + + + + + D Y TL+ A C G++ +A+ L EM+Q+ LPD T
Sbjct: 591 GGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYT 650
Query: 572 YSVLINGLNKQARTMEAKKLLLKLFYDES------VPSDVIYNTLIENC-------TNIE 618
Y+ LI+GL ++ +T+ A LF E+ +P+ V+Y ++ I
Sbjct: 651 YTSLISGLCRKGKTVIAI-----LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705
Query: 619 FQ-------------NVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHS 665
F+ A++ G+ G + + + + M +N PN Y+I++HG+S
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765
Query: 666 KVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNE--------------ELSQV 711
K +V ++ LY+ ++ +G +P +T LV + + M E E+ +
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825
Query: 712 IENILRSCRLSDAE------LAKVLVE--INHKEGNMDAVLNVLT-------------EM 750
N+L S ++ E L KV+ I+ + DA+++VL EM
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 885
Query: 751 AKDGLLPNS 759
+K G+ P S
Sbjct: 886 SKQGISPES 894
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/530 (28%), Positives = 254/530 (47%), Gaps = 20/530 (3%)
Query: 250 CLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETK 309
C +N Y+ LI Y + G I D+ ++ R MGL G P++ + N I+ + K G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 310 GILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSM 369
L E+ ++ + PD T+N L+N C EG+ ++ L +M ++G +P +VTY ++++
Sbjct: 179 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 238
Query: 370 CKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSI 429
CK G A+E D M + + + TY LI+ + + + Y LL +M K P+
Sbjct: 239 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 298
Query: 430 VTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
VTYN LI G G+V A +L+ M GL+P+ V+++ +I G +A
Sbjct: 299 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 358
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
M KG+ P ++Y L+ GLC+ A + M G+ TYT +I+ C G
Sbjct: 359 MEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGF 418
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNT 609
+ +A+ L +EM + G PD+VTYS LING K R AK+++ +++ P+ +IY+T
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 610 LIENCTNIEFQNVA--------------------ALLKGFCMKGLMNEADRVFELMLQRN 649
LI NC + A L+ C G + EA+ M
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 650 HMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELS 709
+PN +D +I+G+ G KA+ ++ +M + G P T L+K L G E
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 710 QVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
+ ++++ D + L+ K GN+ +++ EM + +LP+S
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDS 648
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 177/696 (25%), Positives = 312/696 (44%), Gaps = 96/696 (13%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ +S+ + A ++N G P +++NA++D I G K A +++ M
Sbjct: 304 LINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN---FKEALKMFYMME 360
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
++P+ +Y VL+ G C + ++ F+ M++N +TY +IDG CK G +D
Sbjct: 361 AKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLD 420
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A LL +M GI+P++++Y+ +ING CK GR K K I+ I R GL P+ + Y+TL+
Sbjct: 421 EAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
C+ G L +A+ ++ M+ G + + T+ L+ S+CK+G + A EF M +
Sbjct: 481 YNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGIL 540
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVED---- 447
PN ++ LING+ G +A+ + +EMTK G P+ TY +L+KG C GG + +
Sbjct: 541 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 600
Query: 448 -------------------------------AVGVLHGMARKGLAPDVVSYSTIISGFSR 476
AV + M ++ + PD +Y+++ISG R
Sbjct: 601 LKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR 660
Query: 477 SQE---------------------------LDKAFDT---------KREMVEKGVLPDTI 500
+ +D F + +M G PD +
Sbjct: 661 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 720
Query: 501 TYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEM 560
T +++I G +I + +L EM ++ P+ TY L++ Y D+ + L+ +
Sbjct: 721 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 780
Query: 561 IQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSD-VIYNTLIENC-TNIE 618
I G LPD +T L+ G+ ++ +E +LK F V D +N LI C N E
Sbjct: 781 ILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 839
Query: 619 FQNVAALLKGFCMKGLMNEADRVFELM--LQRNHM-----------------PNEAVYDI 659
L+K G+ + D ++ L RNH P Y
Sbjct: 840 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 899
Query: 660 IIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSC 719
+I+G +VG+++ A+ + ++M+ P V +V+AL G +E + ++ +L+
Sbjct: 900 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 959
Query: 720 RLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGL 755
+ L+ + K GN+ L + M+ GL
Sbjct: 960 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 995
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 168/627 (26%), Positives = 285/627 (45%), Gaps = 59/627 (9%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+D+AV ++N G P +++Y+A+++ + GR K A+E+ + + +SPN
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR---FKTAKEIVCRIYRVGLSPNGII 475
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
Y+ LI C +G L+ +R + M + T+N L+ CK G++ +A + +R M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 282 LKGIEPNLISYNVIING-----------------------------------LCKEGRLK 306
GI PN +S++ +ING LCK G L+
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 307 ETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLI 366
E + L + D V YNTLL CK GNL +A+ L EMV+ + P+ TYTSLI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 367 NSMCKSGNLNRAMEFFDQMHVR-ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGF 425
+ +C+ G A+ F + R + PN+ YT ++G + G +M G
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715
Query: 426 MPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFD 485
P IVT NA+I G+ G++E +L M + P++ +Y+ ++ G+S+ +++ +F
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 775
Query: 486 TKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYC 545
R ++ G+LPD +T SL+ G+CE + ++ + + RG+ D +T+ LI+ C
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCC 835
Query: 546 TEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDV 605
G+I A L M G D T +++ LN+ R E++ +L ++ P
Sbjct: 836 ANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESR 895
Query: 606 IYNTLIENCTNI-----EF-------------QNVA--ALLKGFCMKGLMNEADRVFELM 645
Y LI + F NVA A+++ G +EA + M
Sbjct: 896 KYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM 955
Query: 646 LQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMN 705
L+ +P A + ++H K GNV +A +L M G V+ VL+ L G
Sbjct: 956 LKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDM 1015
Query: 706 EELSQVIENILRSCRLSDAELAKVLVE 732
++ E + L++A K L+
Sbjct: 1016 ALAFELYEEMKGDGFLANATTYKALIR 1042
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/575 (25%), Positives = 263/575 (45%), Gaps = 25/575 (4%)
Query: 132 CLKETYHLCDS------TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYN 185
CLKE + ++ T +++V S + +A + G +P +S++
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547
Query: 186 AILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEM 245
+++ SG +K A V++EM K P +TY L++G C G L +F +
Sbjct: 548 CLINGYGNSGEG--LK-AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 246 EKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRL 305
+ V YNTL+ CK G + A L +M + I P+ +Y +I+GLC++G+
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664
Query: 306 KETKGILNEISRKG-LVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTS 364
E +G ++P++V Y ++G K G + +M G +P++VT +
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 724
Query: 365 LINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNG 424
+I+ + G + + + +M + PN TY L++G+S+ + ++ L + NG
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 784
Query: 425 FMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAF 484
+P +T ++L+ G C +E + +L +G+ D +++ +IS + E++ AF
Sbjct: 785 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAF 844
Query: 485 DTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAY 544
D + M G+ D T +++ L R E+ + EM +G+SP+ Y LIN
Sbjct: 845 DLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGL 904
Query: 545 CTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSD 604
C GDI A + +EMI P V S ++ L K + EA LL + + VP+
Sbjct: 905 CRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTI 964
Query: 605 VIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGH 664
+ TL+ C C G + EA + +M + Y+++I G
Sbjct: 965 ASFTTLMHLC---------------CKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1009
Query: 665 SKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKAL 699
G++ A++LY++M GF+ + T L++ L
Sbjct: 1010 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 225/455 (49%), Gaps = 6/455 (1%)
Query: 184 YNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFS 243
YN +L ++ +SG N K A ++ EM + + P+ YTY LI G C G + + F
Sbjct: 616 YNTLLTAMCKSG--NLAK-AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 672
Query: 244 EME-KNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKE 302
E E + N L N V Y +DG K G+ M G P++++ N +I+G +
Sbjct: 673 EAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRM 732
Query: 303 GRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTY 362
G++++T +L E+ + P+ TYN LL+GY K ++ + +L+ ++ NG+ P+ +T
Sbjct: 733 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTC 792
Query: 363 TSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTK 422
SL+ +C+S L ++ R + + T+ LI+ +G ++ A+ L+ MT
Sbjct: 793 HSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS 852
Query: 423 NGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDK 482
G T +A++ R +++ VLH M+++G++P+ Y +I+G R ++
Sbjct: 853 LGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKT 912
Query: 483 AFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLIN 542
AF K EM+ + P + S+++ L + + EA L + ML + P ++TTL++
Sbjct: 913 AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 972
Query: 543 AYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVP 602
C G++ +AL L M G D+V+Y+VLI GL + A +L ++ D +
Sbjct: 973 LCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLA 1032
Query: 603 SDVIYNTLIENCTNIE--FQNVAALLKGFCMKGLM 635
+ Y LI E F +LK +G +
Sbjct: 1033 NATTYKALIRGLLARETAFSGADIILKDLLARGFI 1067
Score = 182 bits (463), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 210/432 (48%), Gaps = 4/432 (0%)
Query: 164 KAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNN-WVKFAEEVYNEMGKSRVSPNVYTY 222
KAV++ +P +Y +++ + R G+ + FA+E + V PN Y
Sbjct: 631 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE---ARGNVLPNKVMY 687
Query: 223 NVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGL 282
+ G G + G+ F +M+ ++VT N +IDGY ++G+I+ LL +MG
Sbjct: 688 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 747
Query: 283 KGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQ 342
+ PNL +YN++++G K + + + I G++PD++T ++L+ G C+ L
Sbjct: 748 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 807
Query: 343 ALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLIN 402
L + + G+ + T+ LI+ C +G +N A + M + ++ T +++
Sbjct: 808 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 867
Query: 403 GFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAP 462
+++ E+ +L+EM+K G P Y LI G C G ++ A V M + P
Sbjct: 868 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 927
Query: 463 DVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELF 522
V+ S ++ ++ + D+A R M++ ++P ++++L+H C+ + EA EL
Sbjct: 928 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 987
Query: 523 QEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQ 582
M + G+ D +Y LI C +GD+ A L++EM GFL + TY LI GL +
Sbjct: 988 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1047
Query: 583 ARTMEAKKLLLK 594
++LK
Sbjct: 1048 ETAFSGADIILK 1059
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 195/671 (29%), Positives = 338/671 (50%), Gaps = 65/671 (9%)
Query: 59 PEAAFNLLLKTQSDQTLTLKFLKWAQPQPFFTPKLK--CLTLHILTKFKLYKSAQTLAQN 116
P A +L + ++D TL +F+ F P K L+L + + + AQ+
Sbjct: 78 PLAVVEVLYRCRNDLTLGQRFV---DQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 117 LAVDLPRDDGNF---VFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAK 173
+ + R G + + L T+ C S S V DL++++Y + +A L +
Sbjct: 135 CLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDS--VFDLLIRTYVQARKLREAHEAFTLLR 192
Query: 174 VHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVG 233
GF + + NA++ S++R G WV+ A VY E+ +S V NVYT N+++ C G
Sbjct: 193 SKGFTVSIDACNALIGSLVRIG---WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 234 DLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYN 293
+E F S++++ ++VTYNTLI Y G +++AF+L+ M KG P + +YN
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 294 VIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRN 353
+INGLCK G+ + K + E+ R GL PD TY +LL CK+G++ + + ++M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 354 GLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHG----- 408
+ P++V ++S+++ +SGNL++A+ +F+ + L P+ YT LI G+ + G
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 409 ------------------------------FLDEAYRLLNEMTKNGFMPSIVTYNALIKG 438
L EA +L NEMT+ P T LI G
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 439 HCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPD 498
HC G +++A+ + M K + DVV+Y+T++ GF + ++D A + +MV K +LP
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPT 549
Query: 499 TITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHD 558
I+YS L++ LC + + EA ++ EM+S+ + P ++I YC G+ +
Sbjct: 550 PISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLE 609
Query: 559 EMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDES--VPSDVIYNTLIENCTN 616
+MI +GF+PD ++Y+ LI G ++ +A L+ K+ ++ VP YN+
Sbjct: 610 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS------- 662
Query: 617 IEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDL 676
+L GFC + M EA+ V M++R P+ + Y +I+G N+ +A+ +
Sbjct: 663 --------ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Query: 677 YKKMVRSGFVP 687
+ +M++ GF P
Sbjct: 715 HDEMLQRGFSP 725
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 251/454 (55%), Gaps = 40/454 (8%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ +YS ++++A ++N GF PGV +YN +++ + + G+ + A+EV+ EM
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGK---YERAKEVFAEML 332
Query: 212 KSRVSPNVYTYNVLIRGFCGVGD-----------------------------------LE 236
+S +SP+ TY L+ C GD L+
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 237 MGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVII 296
L +F+ +++ + + V Y LI GYC+ G I A L +M +G ++++YN I+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 297 NGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLS 356
+GLCK L E + NE++ + L PD T L++G+CK GNL A+ L +M +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 357 PNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRL 416
+VVTY +L++ K G+++ A E + M +E+ P +Y+ L+N G L EA+R+
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 417 LNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSR 476
+EM P+++ N++IKG+C G D L M +G PD +SY+T+I GF R
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 477 SQELDKAFDTKREMVEK--GVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDE 534
+ + KAF ++M E+ G++PD TY+S++HG C Q ++ EA + ++M+ RG++PD
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDR 692
Query: 535 FTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
TYT +IN + ++ ++ +A R+HDEM+Q+GF PD
Sbjct: 693 STYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/564 (26%), Positives = 287/564 (50%), Gaps = 30/564 (5%)
Query: 147 AVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAE-- 204
AV++++ + + L + + V+ + F LS +A++ ++RSGR + +
Sbjct: 80 AVVEVLYRCRNDLTLGQRFVDQLGF-HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLR 138
Query: 205 ----------EVYNEMGK--SRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLA 252
E+ N + S N +++LIR + L F+ +
Sbjct: 139 MIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTV 198
Query: 253 NVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGIL 312
++ N LI ++G ++ A+ + +++ G+ N+ + N+++N LCK+G++++ L
Sbjct: 199 SIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFL 258
Query: 313 NEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKS 372
+++ KG+ PD VTYNTL++ Y +G + +A L M G SP V TY ++IN +CK
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 373 GNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTY 432
G RA E F +M L P+ TY +L+ + G + E ++ ++M +P +V +
Sbjct: 319 GKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCF 378
Query: 433 NALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE 492
++++ G ++ A+ + + GL PD V Y+ +I G+ R + A + + EM++
Sbjct: 379 SSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ 438
Query: 493 KGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQ 552
+G D +TY++++HGLC+++ + EA +LF EM R + PD +T T LI+ +C G++
Sbjct: 439 QGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQN 498
Query: 553 ALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
A+ L +M +K DVVTY+ L++G K AK++ + E +P+ + Y+ L+
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV- 557
Query: 613 NCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQK 672
C KG + EA RV++ M+ +N P + + +I G+ + GN
Sbjct: 558 --------------NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASD 603
Query: 673 AYDLYKKMVRSGFVPHTVTIIVLV 696
+KM+ GFVP ++ L+
Sbjct: 604 GESFLEKMISEGFVPDCISYNTLI 627
Score = 176 bits (447), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 241/543 (44%), Gaps = 69/543 (12%)
Query: 234 DLEMGLRFFSEMEKN--NCLANVVTYNTLIDGYCKLGRIDDA----FKLLRDMGLKGIE- 286
DL +G RF ++ + N ++ + +I + GR+ DA +++R G+ +E
Sbjct: 91 DLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEI 150
Query: 287 ------------PNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGY 334
N ++++I + +L+E + KG N L+
Sbjct: 151 VNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 335 CKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNE 394
+ G + A ++ E+ R+G+ NV T ++N++CK G + + F
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTF------------- 257
Query: 395 KTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHG 454
L+++ + G P IVTYN LI + + G +E+A +++
Sbjct: 258 ----------------------LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 455 MARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRR 514
M KG +P V +Y+T+I+G + + ++A + EM+ G+ PD+ TY SL+ C++
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 515 ITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSV 574
+ E ++F +M SR + PD ++++++ + G++ +AL + + + G +PD V Y++
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 575 LINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGL 634
LI G ++ A L ++ V YNT+ L G C + +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI---------------LHGLCKRKM 460
Query: 635 MNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIV 694
+ EAD++F M +R P+ I+I GH K+GN+Q A +L++KM VT
Sbjct: 461 LGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 695 LVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDG 754
L+ G + ++ +++ L +LV +G++ V EM
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKN 580
Query: 755 LLP 757
+ P
Sbjct: 581 IKP 583
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 128/252 (50%), Gaps = 5/252 (1%)
Query: 146 SAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEE 205
S + +++ + L + A+ + K V++YN +LD G+ + A+E
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF---GKVGDIDTAKE 536
Query: 206 VYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYC 265
++ +M + P +Y++L+ C G L R + EM N V+ N++I GYC
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 266 KLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRK--GLVPD 323
+ G D L M +G P+ ISYN +I G +E + + G++ ++ + GLVPD
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPD 656
Query: 324 EVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFD 383
TYN++L+G+C++ + +A V+ +M+ G++P+ TYT +IN NL A D
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 384 QMHVRELRPNEK 395
+M R P++K
Sbjct: 717 EMLQRGFSPDDK 728
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 33/335 (9%)
Query: 425 FMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAF 484
F + ++ +A+I GR+ DA L M R+ + +++ S FS D F
Sbjct: 109 FKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVF 168
Query: 485 DTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAY 544
D LI + R++ EA E F + S+G + LI +
Sbjct: 169 DL------------------LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSL 210
Query: 545 CTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSD 604
G + A ++ E+ + G +V T ++++N L K + + L ++ P
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270
Query: 605 VIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGH 664
V YNTLI + KGLM EA + M + P Y+ +I+G
Sbjct: 271 VTYNTLIS---------------AYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGL 315
Query: 665 SKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDA 724
K G ++A +++ +M+RSG P + T L+ G E +V ++ + D
Sbjct: 316 CKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Query: 725 ELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
++ + + GN+D L + + GL+P++
Sbjct: 376 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 323 bits (827), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 207/719 (28%), Positives = 353/719 (49%), Gaps = 61/719 (8%)
Query: 50 LNSLSSEFTPEAAFNLLLKTQSDQTLTLKFLKWAQPQPFFTPKLKCLTLHILTKFKLYKS 109
L +F + +L+K + D L L F WA+ + + C+ +H+ K K
Sbjct: 78 LKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKV 137
Query: 110 AQTLAQNLAVDLPRDD--GNFV--FSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKA 165
AQ+L + + P+ + +FV F L TY D S V D+ + ++ +A
Sbjct: 138 AQSLISSFW-ERPKLNVTDSFVQFFDLLVYTYK--DWGSDPRVFDVFFQVLVDFGLLREA 194
Query: 166 VNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVY-TYNV 224
+ +G + V S N L +R+S + Y T
Sbjct: 195 RRVFEKMLNYGLVLSVDSCNVYL------------------------TRLSKDCYKTATA 230
Query: 225 LIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKG 284
+I F E + NV +YN +I C+LGRI +A LL M LKG
Sbjct: 231 II--------------VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG 276
Query: 285 IEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQAL 344
P++ISY+ ++NG C+ G L + ++ + RKGL P+ Y +++ C+ L +A
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 345 VLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGF 404
+EM+R G+ P+ V YT+LI+ CK G++ A +FF +MH R++ P+ TYT +I+GF
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF 396
Query: 405 SQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDV 464
Q G + EA +L +EM G P VT+ LI G+C G ++DA V + M + G +P+V
Sbjct: 397 CQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNV 456
Query: 465 VSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQE 524
V+Y+T+I G + +LD A + EM + G+ P+ TY+S+++GLC+ I EA +L E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 525 MLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQAR 584
+ G++ D TYTTL++AYC G++ +A + EM+ KG P +VT++VL+NG
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 585 TMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFEL 644
+ +KLL + P+ +N+L+ K +C++ + A +++
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLV---------------KQYCIRNNLKAATAIYKD 621
Query: 645 MLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGM 704
M R P+ Y+ ++ GH K N+++A+ L+++M GF T VL+K
Sbjct: 622 MCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKK 681
Query: 705 NEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNSGRST 763
E +V + + R +D E+ + +K D +++ + E+ ++ L+ R
Sbjct: 682 FLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQLRGA 740
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 318 bits (814), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 204/702 (29%), Positives = 353/702 (50%), Gaps = 75/702 (10%)
Query: 67 LKTQSDQTLTLKFLKWAQPQPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDDG 126
L++Q D + L+ A +P F+P+ L IL +L +S DD
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPE-PALYEEIL--LRLGRSGSF-----------DDM 102
Query: 127 NFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVN-LAKVHGFMPGVLSYN 185
+ +K + C+ +S+ +I +++SY+ + D+ +++V+ + G P YN
Sbjct: 103 KKILEDMKSSR--CEMGTSTFLI--LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYN 158
Query: 186 AILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEM 245
+L+ ++ N +K E + +M + P+V T+NVLI+ C L + +M
Sbjct: 159 RMLNLLVD---GNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDM 215
Query: 246 EKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRL 305
+ + T+ T++ GY + G +D A ++ M G + +S NVI++G CKEGR+
Sbjct: 216 PSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRV 275
Query: 306 KETKGILNEISRK-GLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTS 364
++ + E+S + G PD+ T+NTL+NG CK G++ A+ + M++ G P+V TY S
Sbjct: 276 EDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNS 335
Query: 365 LINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNG 424
+I+ +CK G + A+E DQM R+ PN TY TLI+ + ++EA L +T G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 425 FMPSIVTYNALIKG------H-----------------------------CTGGRVEDAV 449
+P + T+N+LI+G H C+ G++++A+
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
+L M G A V++Y+T+I GF ++ + +A + EM GV +++TY++LI GL
Sbjct: 456 NMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGL 515
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
C+ RR+ +A +L +M+ G PD++TY +L+ +C GDI +A + M G PD+
Sbjct: 516 CKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGF 629
VTY LI+GL K R A KLL + + YN +I+ G
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ---------------GL 620
Query: 630 CMKGLMNEADRVFELMLQRNHMPNEAV-YDIIIHGHSKVGN-VQKAYDLYKKMVRSGFVP 687
K EA +F ML++N P +AV Y I+ G G +++A D +++ GFVP
Sbjct: 621 FRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Query: 688 HTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKV 729
++ +L + L T M E L +++ +++ R S+ E++ V
Sbjct: 681 EFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMV 722
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 309 bits (791), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 324/612 (52%), Gaps = 28/612 (4%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
V++S L + +A ++ + G ++ YN ++D + + + V A + ++
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK---VWEAVGIKKDLA 289
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ P+V TY L+ G C V + E+GL EM + ++L++G K G+I+
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A L++ + G+ PNL YN +I+ LCK + E + + + + + GL P++VTY+ L+
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+ +C+ G L AL EMV GL +V Y SLIN CK G+++ A F +M ++L
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P TYT+L+ G+ G +++A RL +EMT G PSI T+ L+ G G + DAV +
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
+ MA + P+ V+Y+ +I G+ ++ KAF+ +EM EKG++PDT +Y LIHGLC
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 512 QRRITEACELFQEMLSRGMSP-DEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVV 570
+ +EA ++F + L +G +E YT L++ +C EG + +AL + EM+Q+G D+V
Sbjct: 590 TGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 571 TYSVLINGLNKQARTMEAKKL---LLKLFYDESV-PSDVIYNTLIENCTNIEFQNVAALL 626
Y VLI+G K + +KL LLK +D + P DVIY ++I+ +
Sbjct: 649 CYGVLIDGSLKH----KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT--------- 695
Query: 627 KGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFV 686
G EA +++LM+ +PNE Y +I+G K G V +A L KM V
Sbjct: 696 ------GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 687 PHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNV 746
P+ VT + L ++ + + + N + L++ +L+ ++G ++ +
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 747 LTEMAKDGLLPN 758
+T M DG+ P+
Sbjct: 810 ITRMIGDGVSPD 821
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 206/684 (30%), Positives = 327/684 (47%), Gaps = 65/684 (9%)
Query: 65 LLLKTQSDQTLTLKFLKWAQPQPFFTPKLK--CLTLHILTKFKLYKSAQTLAQNLAVDL- 121
+L+ T D L L+F + F C+ +H L K L+ A +L Q L +
Sbjct: 76 ILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRAL 135
Query: 122 -PRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNL--AKVHGFM 178
P D N +FSC Y C SSS+ DL+++ Y + V + + KV +
Sbjct: 136 KPSDVFNVLFSC----YEKC-KLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKV-SLL 189
Query: 179 PGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMG 238
P V + +A+L +++ A E++N+M + P+VY Y +IR C + DL
Sbjct: 190 PEVRTLSALLHGLVKF---RHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRA 246
Query: 239 LRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIING 298
+ ME C N+V YN LIDG CK ++ +A + +D+ K ++P++++Y ++ G
Sbjct: 247 KEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG 306
Query: 299 LCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPN 358
LCK + +++E+ P E ++L+ G K G + +AL L +V G+SPN
Sbjct: 307 LCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPN 366
Query: 359 VVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLN 418
+ Y +LI+S+CK + A FD+M LRPN+ TY+ LI+ F + G LD A L
Sbjct: 367 LFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLG 426
Query: 419 EMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQ 478
EM G S+ YN+LI GHC G + A G + M K L P VV+Y++++ G+
Sbjct: 427 EMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG 486
Query: 479 ELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYT 538
+++KA EM KG+ P T+++L+ GL I +A +LF EM + P+ TY
Sbjct: 487 KINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 539 TLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYD 598
+I YC EGD+ +A EM +KG +PD +Y LI+GL + EAK + L
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 599 ESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRN--------- 649
+++ Y LL GFC +G + EA V + M+QR
Sbjct: 607 NCELNEICYT---------------GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 650 --------H------------------MPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRS 683
H P++ +Y +I SK G+ ++A+ ++ M+
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 684 GFVPHTVTIIVLVKALHTAGMNEE 707
G VP+ VT ++ L AG E
Sbjct: 712 GCVPNEVTYTAVINGLCKAGFVNE 735
Score = 285 bits (728), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/587 (29%), Positives = 292/587 (49%), Gaps = 59/587 (10%)
Query: 143 TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKF 202
+ S A + +V+ I++A+N+V G P + YNA++DS+ + GR KF
Sbjct: 329 SPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK-GR----KF 383
Query: 203 --AEEVYNEMGKSRVSPN-----------------------------------VYTYNVL 225
AE +++ MGK + PN VY YN L
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 226 IRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGI 285
I G C GD+ F +EM VVTY +L+ GYC G+I+ A +L +M KGI
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 286 EPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALV 345
P++ ++ +++GL + G +++ + NE++ + P+ VTYN ++ GYC+EG++ +A
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 346 LHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFS 405
EM G+ P+ +Y LI+ +C +G + A F D +H NE YT L++GF
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 406 QHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVV 465
+ G L+EA + EM + G +V Y LI G + G+L M +GL PD V
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 466 SYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEM 525
Y+++I S++ + +AF M+ +G +P+ +TY+++I+GLC+ + EA L +M
Sbjct: 684 IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 526 LSRGMSPDEFTYTTLINAYCT-EGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQAR 584
P++ TY ++ E D+ +A+ LH+ ++ KG L + TY++LI G +Q R
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGR 802
Query: 585 TMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFEL 644
EA +L+ ++ D P + Y T+I C + + +A ++
Sbjct: 803 IEEASELITRMIGDGVSPDCITYTTMINE---------------LCRRNDVKKAIELWNS 847
Query: 645 MLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVT 691
M ++ P+ Y+ +IHG G + KA +L +M+R G +P+ T
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 252/471 (53%), Gaps = 14/471 (2%)
Query: 156 YSHLNMIDKAVNIVNLAKVHGFM---------PGVLSYNAILDSVIRSGRNNWVKFAEEV 206
Y + ++I+ +++ GFM P V++Y +++ G+ N A +
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK---ALRL 494
Query: 207 YNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCK 266
Y+EM ++P++YT+ L+ G G + ++ F+EM + N N VTYN +I+GYC+
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 267 LGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVT 326
G + AF+ L++M KGI P+ SY +I+GLC G+ E K ++ + + +E+
Sbjct: 555 EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEIC 614
Query: 327 YNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMH 386
Y LL+G+C+EG L +AL + EMV+ G+ ++V Y LI+ K + +MH
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 387 VRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVE 446
R L+P++ YT++I+ S+ G EA+ + + M G +P+ VTY A+I G C G V
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 447 DAVGVLHGMARKGLAPDVVSYSTIISGFSRSQ-ELDKAFDTKREMVEKGVLPDTITYSSL 505
+A + M P+ V+Y + ++ + ++ KA + ++ KG+L +T TY+ L
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNML 793
Query: 506 IHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGF 565
I G C Q RI EA EL M+ G+SPD TYTT+IN C D+ +A+ L + M +KG
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGI 853
Query: 566 LPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTN 616
PD V Y+ LI+G +A +L ++ +P++ T N T+
Sbjct: 854 RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSNDTS 904
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 179/428 (41%), Gaps = 108/428 (25%)
Query: 156 YSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRV 215
Y I+KA+ + + G P + ++ +L + R+G ++ A +++NEM + V
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAG---LIRDAVKLFNEMAEWNV 538
Query: 216 SPNVYTYNVLIRGFCGVGDLEMGLRFFSEM------------------------------ 245
PN TYNV+I G+C GD+ F EM
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 246 -----EKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIING-- 298
K NC N + Y L+ G+C+ G++++A + ++M +G++ +L+ Y V+I+G
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 299 ----------LCKE-----------------------GRLKETKGILNEISRKGLVPDEV 325
L KE G KE GI + + +G VP+EV
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 326 TYNTLLNGYCKEGNLHQALVLHAEM----------------------------------- 350
TY ++NG CK G +++A VL ++M
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 351 VRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFL 410
+ GL N TY LI C+ G + A E +M + P+ TYTT+IN + +
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 411 DEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTI 470
+A L N MT+ G P V YN LI G C G + A + + M R+GL P+ + T
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTT 898
Query: 471 ISGFSRSQ 478
S + S+
Sbjct: 899 TSNDTSSK 906
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 124/242 (51%), Gaps = 12/242 (4%)
Query: 121 LPRDDGNFVFSCLKETYHLC---DSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGF 177
L D F LKE + D +++ID + S +A I +L G
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID----AKSKTGDFKEAFGIWDLMINEGC 713
Query: 178 MPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFC-GVGDLE 236
+P ++Y A+++ + ++G +V AE + ++M PN TY + G D++
Sbjct: 714 VPNEVTYTAVINGLCKAG---FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 237 MGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVII 296
+ + + K LAN TYN LI G+C+ GRI++A +L+ M G+ P+ I+Y +I
Sbjct: 771 KAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 297 NGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLS 356
N LC+ +K+ + N ++ KG+ PD V YNTL++G C G + +A L EM+R GL
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Query: 357 PN 358
PN
Sbjct: 890 PN 891
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 306 bits (785), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 287/536 (53%), Gaps = 24/536 (4%)
Query: 184 YNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFS 243
YN +L+S+ R G + +K +VY EM + +V PN+YTYN ++ G+C +G++E ++ S
Sbjct: 186 YNTLLNSLARFGLVDEMK---QVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 244 EMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEG 303
++ + + TY +LI GYC+ +D AFK+ +M LKG N ++Y +I+GLC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 304 RLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYT 363
R+ E + ++ P TY L+ C +AL L EM G+ PN+ TYT
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 364 SLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKN 423
LI+S+C +A E QM + L PN TY LING+ + G +++A ++ M
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 424 GFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKA 483
P+ TYN LIKG+C V A+GVL+ M + + PDVV+Y+++I G RS D A
Sbjct: 423 KLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 484 FDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINA 543
+ M ++G++PD TY+S+I LC+ +R+ EAC+LF + +G++P+ YT LI+
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 544 YCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKL---LLKLFYDES 600
YC G + +A + ++M+ K LP+ +T++ LI+GL + EA L ++K+ +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 601 VPSDVI-----------------YNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFE 643
V +D I + ++ + T + ++ +C +G + +A+ +
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 644 LMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKAL 699
M + P+ Y +I G+ +G A+D+ K+M +G P T + L+K L
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 291 bits (746), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 318/616 (51%), Gaps = 25/616 (4%)
Query: 155 SYSHL-------NMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVY 207
+Y+HL ID+A+++ K P V +Y ++ S+ S R + A +
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSE---ALNLV 346
Query: 208 NEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKL 267
EM ++ + PN++TY VLI C E +M + + NV+TYN LI+GYCK
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 268 GRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTY 327
G I+DA ++ M + + PN +YN +I G CK + + G+LN++ + ++PD VTY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTY 465
Query: 328 NTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHV 387
N+L++G C+ GN A L + M GL P+ TYTS+I+S+CKS + A + FD +
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 388 RELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVED 447
+ + PN YT LI+G+ + G +DEA+ +L +M +P+ +T+NALI G C G++++
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 448 AVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIH 507
A + M + GL P V + + +I + + D A+ ++M+ G PD TY++ I
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 508 GLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLP 567
C + R+ +A ++ +M G+SPD FTY++LI Y G A + M G P
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 568 DVVTYSVLINGL------NKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQN 621
T+ LI L ++ E + + +D V + ++E+ ++
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE---LLEKMVEHSVTPNAKS 762
Query: 622 VAALLKGFCMKGLMNEADRVFELMLQRNH--MPNEAVYDIIIHGHSKVGNVQKAYDLYKK 679
L+ G C G + A++VF+ M QRN P+E V++ ++ K+ +A +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHM-QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 680 MVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELA-KVLVEINHKEG 738
M+ G +P + VL+ L+ G E + V +N+L+ C + ELA K++++ K+G
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ-CGYYEDELAWKIIIDGVGKQG 880
Query: 739 NMDAVLNVLTEMAKDG 754
++A + M K+G
Sbjct: 881 LVEAFYELFNVMEKNG 896
Score = 250 bits (638), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 264/490 (53%), Gaps = 27/490 (5%)
Query: 292 YNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMV 351
YN ++N L + G + E K + E+ + P+ TYN ++NGYCK GN+ +A +++V
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 352 RNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLD 411
GL P+ TYTSLI C+ +L+ A + F++M ++ R NE YT LI+G +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 412 EAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTII 471
EA L +M + P++ TY LIK C R +A+ ++ M G+ P++ +Y+ +I
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 472 SGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMS 531
+ +KA + +M+EKG++P+ ITY++LI+G C++ I +A ++ + M SR +S
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 532 PDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQART--MEAK 589
P+ TY LI YC + ++ +A+ + ++M+++ LPDVVTY+ LI+G Q R+ ++
Sbjct: 426 PNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG---QCRSGNFDSA 481
Query: 590 KLLLKLFYDES-VPSDVIYNTLI----------ENC---TNIEFQNV-------AALLKG 628
LL L D VP Y ++I E C ++E + V AL+ G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
+C G ++EA + E ML +N +PN ++ +IHG G +++A L +KMV+ G P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
T +L+ L G + + +L S DA ++ +EG + +++
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 749 EMAKDGLLPN 758
+M ++G+ P+
Sbjct: 662 KMRENGVSPD 671
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/516 (26%), Positives = 224/516 (43%), Gaps = 93/516 (18%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ Y MI+ AV++V L + P +YN ++ +S V A V N+M
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN----VHKAMGVLNKML 454
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ +V P+V TYN LI G C G+ + R S M + + TY ++ID CK R++
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A L + KG+ PN++ Y +I+G CK G++ E +L ++ K +P+ +T+N L+
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQM------ 385
+G C +G L +A +L +MV+ GL P V T T LI+ + K G+ + A F QM
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 386 ------------HVRELR-----------------PNEKTYTTLINGF------------ 404
+ RE R P+ TY++LI G+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDV 694
Query: 405 -----------SQHGFL------------------------------DEAYRLLNEMTKN 423
SQH FL D LL +M ++
Sbjct: 695 LKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEH 754
Query: 424 GFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMAR-KGLAPDVVSYSTIISGFSRSQELDK 482
P+ +Y LI G C G + A V M R +G++P + ++ ++S + ++ ++
Sbjct: 755 SVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Query: 483 AFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLIN 542
A +M+ G LP + LI GL ++ +FQ +L G DE + +I+
Sbjct: 815 AAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Query: 543 AYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLING 578
+G + L + M + G TYS+LI G
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 20/221 (9%)
Query: 558 DEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTL------- 610
DE + + + Y+ L+N L + E K++ +++ D+ P+ YN +
Sbjct: 172 DERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL 231
Query: 611 -------------IENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVY 657
+E + +F +L+ G+C + ++ A +VF M + NE Y
Sbjct: 232 GNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAY 291
Query: 658 DIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILR 717
+IHG + +A DL+ KM P T VL+K+L + E +++ +
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 718 SCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ + VL++ + + +L +M + GL+PN
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 170/559 (30%), Positives = 295/559 (52%), Gaps = 23/559 (4%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+D AV++ +P ++ +N +L ++ + + + V E M R+S ++Y+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGE---RMQNLRISYDLYS 117
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
YN+LI FC L + L +M K ++VT ++L++GYC RI +A L+ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
+ +PN +++N +I+GL + E +++ + +G PD TY T++NG CK G++
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
AL L +M + + +VV YT++I+++C N+N A+ F +M + +RPN TY +LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
+G +A RLL++M + P++VT++ALI G++ +A + M ++ +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
PD+ +YS++I+GF LD+A M+ K P+ +TY++LI G C+ +R+ E EL
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNK 581
F+EM RG+ + TY TLI GD A ++ +M+ G PD++TYS+L++GL K
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 582 QARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-C------------TNIEFQNV------ 622
+ +A + L + P YN +IE C ++ + V
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 537
Query: 623 -AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
++ GFC KGL EAD +F M + +PN Y+ +I + G+ + +L K+M
Sbjct: 538 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 597
Query: 682 RSGFVPHTVTIIVLVKALH 700
GFV TI +++ LH
Sbjct: 598 SCGFVGDASTISMVINMLH 616
Score = 275 bits (704), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 283/557 (50%), Gaps = 15/557 (2%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ EM +SR P++ +N L+ + ++ + M+ ++ +YN LI+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ A +L M G EP++++ + ++NG C R+ E +++++ P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+ VT+NTL++G +A+ L MV G P++ TY +++N +CK G+++ A+
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M ++ + YTT+I+ + +++A L EM G P++VTYN+LI+ C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR DA +L M + + P+VV++S +I F + +L +A EM+++ + PD TY
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
SSLI+G C R+ EA +F+ M+S+ P+ TY TLI +C + + + L EM Q
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+G + + VTY+ LI GL + A+K+ K+ D VP D+I ++
Sbjct: 424 RGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSI------------ 470
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
LL G C G + +A VFE + + P+ Y+I+I G K G V+ +DL+ +
Sbjct: 471 --LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 683 SGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDA 742
G P+ + ++ G+ EE + + L ++ L+ ++G+ A
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 743 VLNVLTEMAKDGLLPNS 759
++ EM G + ++
Sbjct: 589 SAELIKEMRSCGFVGDA 605
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/490 (30%), Positives = 248/490 (50%), Gaps = 15/490 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L +M P+++ +N +++ + K + + + + D +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
L+N +C+ L AL + +M++ G P++VT +SL+N C ++ A+ DQM V
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
E +PN T+ TLI+G H EA L++ M G P + TY ++ G C G ++ A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L M + + DVV Y+TII + ++ A + EM KG+ P+ +TY+SLI
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC R ++A L +M+ R ++P+ T++ LI+A+ EG + +A +L+DEMI++ PD
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+ TYS LING R EAK + + + P+ V YNTLI KG
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI---------------KG 404
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
FC + E +F M QR + N Y+ +I G + G+ A ++KKMV G P
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
+T +L+ L G E+ V E + +S D +++E K G ++ ++
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 749 EMAKDGLLPN 758
++ G+ PN
Sbjct: 525 SLSLKGVKPN 534
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 197/362 (54%), Gaps = 3/362 (0%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ + + ++ A+N+ G P V++YN+++ + GR W A + ++M
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR--WSD-ASRLLSDMI 317
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ +++PNV T++ LI F G L + + EM K + ++ TY++LI+G+C R+D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A + M K PN+++YN +I G CK R++E + E+S++GLV + VTYNTL+
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
G + G+ A + +MV +G+ P+++TY+ L++ +CK G L +A+ F+ + ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P+ TY +I G + G +++ + L ++ G P+++ Y +I G C G E+A +
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
M G P+ +Y+T+I R + + + +EM G + D T S +I+ L +
Sbjct: 558 FREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617
Query: 512 QR 513
R
Sbjct: 618 GR 619
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 195/420 (46%), Gaps = 50/420 (11%)
Query: 340 LHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTT 399
L A+ L EMV++ P++V + L++++ K + + ++M + + +Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 400 LINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKG 459
LIN F + L A +L +M K G+ P IVT ++L+ G+C G R+ +AV ++ M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 460 LAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEAC 519
P+ V+++T+I G + +A MV +G PD TY ++++GLC++ I A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 520 ELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGL 579
L ++M + D YTT+I+A C ++ AL L EM KG P+VVTY+ LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 580 NKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEAD 639
R +A +LL + +IE N +AL+ F +G + EA+
Sbjct: 301 CNYGRWSDASRLL---------------SDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 640 RVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKAL 699
++++ M++R+ P+ Y +I+G + +A +++ M+ P+ VT L+K
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 700 HTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
A EE + + EM++ GL+ N+
Sbjct: 406 CKAKRVEE-----------------------------------GMELFREMSQRGLVGNT 430
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 302/572 (52%), Gaps = 25/572 (4%)
Query: 162 IDKAVNIV-NLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVY 220
+D AVN+ ++ K F P ++ ++ +L ++ + + + V E +G +S N+Y
Sbjct: 62 LDDAVNLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG---ISHNLY 117
Query: 221 TYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDM 280
TY++LI FC L + L ++M K ++VT N+L++G+C RI DA L+ M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 281 GLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNL 340
G +P+ ++N +I+GL + R E +++ + KG PD VTY ++NG CK G++
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDI 237
Query: 341 HQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTL 400
AL L +M + + P VV Y ++I+++C N+N A+ F +M + +RPN TY +L
Sbjct: 238 DLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 401 INGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGL 460
I +G +A RLL++M + P++VT++ALI G++ +A + M ++ +
Sbjct: 298 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 461 APDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACE 520
PD+ +YS++I+GF LD+A M+ K P+ +TY++LI G C+ +R+ E E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 521 LFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
LF+EM RG+ + TYTTLI+ + + A + +M+ G LPD++TYS+L++GL
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 581 KQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-CTNIEFQN------------------ 621
+ A + L + P YN +IE C + ++
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVV 537
Query: 622 -VAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKM 680
++ GFC KGL EAD +F M + +P+ Y+ +I H + G+ + +L ++M
Sbjct: 538 TYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 681 VRSGFVPHTVTIIVLVKALHTAGMNEELSQVI 712
FV TI ++ LH +++ +++
Sbjct: 598 RSCRFVGDASTIGLVTNMLHDGRLDKSFLKML 629
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 282/549 (51%), Gaps = 17/549 (3%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A ++ +M KSR P++ ++ L+ + ++ + +M+ N+ TY+ LI+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ A +L M G EP++++ N ++NG C R+ + ++ ++ G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D T+NTL++G + +A+ L MV G P++VTY ++N +CK G+++ A+
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M ++ P Y T+I+ + +++A L EM G P++VTYN+LI+ C
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR DA +L M + + P+VV++S +I F + +L +A EM+++ + PD TY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
SSLI+G C R+ EA +F+ M+S+ P+ TY TLI +C + + + L EM Q
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+G + + VTY+ LI+G QAR + +++ K + V D++ ++
Sbjct: 425 RGLVGNTVTYTTLIHGF-FQARECDNAQIVFKQMVSDGVLPDIMTYSI------------ 471
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHM-PNEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
LL G C G + A VFE LQR+ M P+ Y+I+I G K G V+ +DL+ +
Sbjct: 472 --LLDGLCNNGKVETALVVFEY-LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 682 RSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMD 741
G P+ VT ++ G+ EE + + L D+ L+ + ++G+
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588
Query: 742 AVLNVLTEM 750
A ++ EM
Sbjct: 589 ASAELIREM 597
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 248/490 (50%), Gaps = 15/490 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L DM P+++ ++ +++ + K + + ++ G+ + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
L+N +C+ L AL + A+M++ G P++VT SL+N C ++ A+ QM
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+P+ T+ TLI+G +H EA L++ M G P +VTY ++ G C G ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L M + + P VV Y+TII + ++ A + EM KG+ P+ +TY+SLI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC R ++A L +M+ R ++P+ T++ LI+A+ EG + +A +L+DEMI++ PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+ TYS LING R EAK + + + P+ V YNTLI KG
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI---------------KG 405
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
FC ++E +F M QR + N Y +IHG + A ++K+MV G +P
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPD 465
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
+T +L+ L G E V E + RS D +++E K G ++ ++
Sbjct: 466 IMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 749 EMAKDGLLPN 758
++ G+ PN
Sbjct: 526 SLSLKGVKPN 535
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 183/369 (49%), Gaps = 33/369 (8%)
Query: 148 VIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGR----------- 196
+ + ++ + + ++ A+N+ G P V++YN+++ + GR
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 197 ------NNWVKF---------------AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
N V F AE++Y+EM K + P+++TY+ LI GFC L
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 236 EMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVI 295
+ F M +C NVVTYNTLI G+CK R+D+ +L R+M +G+ N ++Y +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 296 INGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGL 355
I+G + + + ++ G++PD +TY+ LL+G C G + ALV+ + R+ +
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 356 SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYR 415
P++ TY +I MCK+G + + F + ++ ++PN TYTT+++GF + G +EA
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 416 LLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFS 475
L EM + G +P TYN LI+ H G + ++ M D S +++
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD-ASTIGLVTNML 616
Query: 476 RSQELDKAF 484
LDK+F
Sbjct: 617 HDGRLDKSF 625
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 174/370 (47%), Gaps = 20/370 (5%)
Query: 410 LDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
LD+A L +M K+ PSIV ++ L+ + + + + M G++ ++ +YS
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
+I+ F R +L A +M++ G PD +T +SL++G C RI++A L +M+ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
PD FT+ TLI+ +A+ L D M+ KG PD+VTY +++NGL K+ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA--------------------ALLKGF 629
LL K+ + P VIYNT+I+ N + N A +L++
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 630 CMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHT 689
C G ++A R+ M++R PN + +I K G + +A LY +M++ P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 690 VTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTE 749
T L+ +E + E ++ + L++ K +D + + E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 750 MAKDGLLPNS 759
M++ GL+ N+
Sbjct: 422 MSQRGLVGNT 431
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 300 bits (768), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 199/694 (28%), Positives = 337/694 (48%), Gaps = 59/694 (8%)
Query: 65 LLLKTQSDQTLTLKFLKWAQPQPFFTPKLK--CLTLHILTKFKLYKSAQTLAQNLAVDLP 122
+L++ + D L KF KW+ + F ++ C+ HIL ++Y A ++ + + L
Sbjct: 114 VLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMV--LS 171
Query: 123 RDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVL 182
+ D + VF L T ++C +PG
Sbjct: 172 KADCD-VFDVLWSTRNVC-------------------------------------VPGFG 193
Query: 183 SYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFF 242
++A+ +I G ++ A + +++M + RV P + N L+ F +G + RFF
Sbjct: 194 VFDALFSVLIDLGM---LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 243 SEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKE 302
+M V TYN +ID CK G ++ A L +M +G+ P+ ++YN +I+G K
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 303 GRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTY 362
GRL +T E+ PD +TYN L+N +CK G L L + EM NGL PNVV+Y
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSY 370
Query: 363 TSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTK 422
++L+++ CK G + +A++F+ M L PNE TYT+LI+ + G L +A+RL NEM +
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 423 NGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDK 482
G ++VTY ALI G C R+++A + M G+ P++ SY+ +I GF +++ +D+
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Query: 483 AFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLIN 542
A + E+ +G+ PD + Y + I GLC +I A + EM G+ + YTTL++
Sbjct: 491 ALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMD 550
Query: 543 AYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVP 602
AY G+ + L L DEM + VVT+ VLI+GL K +A ++ D +
Sbjct: 551 AYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ 610
Query: 603 SDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIH 662
++ T A++ G C + A +FE M+Q+ +P+ Y ++
Sbjct: 611 ANAAIFT--------------AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMD 656
Query: 663 GHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLS 722
G+ K GNV +A L KM G + LV L ++ +E ++
Sbjct: 657 GNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Query: 723 DAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLL 756
D L +++ +++ G +D + + + + K LL
Sbjct: 717 DEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 151/306 (49%), Gaps = 16/306 (5%)
Query: 133 LKETYHLCDSTSSSAVI------DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNA 186
+KE L ++ VI + ++ + +D+A+ ++N K G P +L Y
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 187 ILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEME 246
+ + + ++ A+ V NEM + + N Y L+ + G+ GL EM+
Sbjct: 513 FIWGLCSLEK---IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 247 KNNCLANVVTYNTLIDGYCK---LGRIDDAF-KLLRDMGLKGIEPNLISYNVIINGLCKE 302
+ + VVT+ LIDG CK + + D F ++ D GL+ N + +I+GLCK+
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA---NAAIFTAMIDGLCKD 626
Query: 303 GRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTY 362
+++ + ++ +KGLVPD Y +L++G K+GN+ +AL L +M G+ +++ Y
Sbjct: 627 NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAY 686
Query: 363 TSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTK 422
TSL+ + L +A F ++M + P+E +++ + G +DEA L + + K
Sbjct: 687 TSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
Query: 423 NGFMPS 428
+ + S
Sbjct: 747 HQLLTS 752
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 122/339 (35%), Gaps = 70/339 (20%)
Query: 420 MTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQE 479
MT+NGF S+ +Y + DA VL M DV
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDV--------------- 177
Query: 480 LDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTT 539
D + T+ V P + +L L + + EA + F +M + P +
Sbjct: 178 FDVLWSTRNVCV-----PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNG 232
Query: 540 LINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDE 599
L++ + G R +MI G P V TY+++I+ + K+ A+ L ++ +
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRG 292
Query: 600 SVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDI 659
VP V YN++I+ GF G +++ FE M P+ Y+
Sbjct: 293 LVPDTVTYNSMID---------------GFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 660 IIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSC 719
+I+ K G + + Y++M +G P+ V+ LV A
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC------------------- 378
Query: 720 RLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
KEG M + +M + GL+PN
Sbjct: 379 ----------------KEGMMQQAIKFYVDMRRVGLVPN 401
Score = 38.1 bits (87), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/129 (19%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Query: 634 LMNEAD-RVFELMLQRNHM--PNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTV 690
++++AD VF+++ ++ P V+D + +G +++A + KM R P T
Sbjct: 169 VLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTR 228
Query: 691 TIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEM 750
+ L+ G +++ + ++++ + ++++ KEG+++A + EM
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 751 AKDGLLPNS 759
GL+P++
Sbjct: 289 KFRGLVPDT 297
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 298 bits (762), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/560 (31%), Positives = 299/560 (53%), Gaps = 31/560 (5%)
Query: 142 STSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVK 201
S S + ++D +VK+ I+ +NI+ F P Y + + ++ V
Sbjct: 144 SDSLTLLLDHLVKTKQFRVTINVFLNILE----SDFRPSKFMYGKAIQAAVKLSD---VG 196
Query: 202 FAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLI 261
E++N M R+ P+V+ YNVLI G C + + F EM L +++TYNTLI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 262 DGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLV 321
DGYCK G + +FK+ M IEP+LI++N ++ GL K G +++ + +L E+ G V
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 322 PDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEF 381
PD T++ L +GY AL ++ V +G+ N T + L+N++CK G + +A E
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 382 FDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCT 441
+ + L PNE Y T+I+G+ + G L A + M K G P + YN LI+ C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 442 GGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTIT 501
G +E+A ++ M KG++P V +Y+ +I G+ R E DK FD +EM + G +P+ ++
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 502 YSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMI 561
Y +LI+ LC+ ++ EA + ++M RG+SP Y LI+ C++G I A R EM+
Sbjct: 497 YGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEML 556
Query: 562 QKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI---------E 612
+KG ++VTY+ LI+GL+ + EA+ LLL++ P YN+LI +
Sbjct: 557 KKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQ 616
Query: 613 NCT----NIEFQNVAALLKGF------CMKGLMNEADRVF-ELMLQRNHMPNEAVYDIII 661
C ++ + LK + C K + +R+F E+ L+ P+ VY+ ++
Sbjct: 617 RCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLK----PDLLVYNGVL 672
Query: 662 HGHSKVGNVQKAYDLYKKMV 681
H ++ G+++KA++L K+M+
Sbjct: 673 HCYAVHGDMEKAFNLQKQMI 692
Score = 282 bits (722), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 175/620 (28%), Positives = 313/620 (50%), Gaps = 64/620 (10%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ L+ + K + + N K P V YN ++D + + R N AE++++EM
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMND---AEQLFDEML 241
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
R+ P++ TYN LI G+C G+ E + M+ ++ +++T+NTL+ G K G ++
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 272 DA---FKLLRDMGL--------------------------------KGIEPNLISYNVII 296
DA K ++D+G G++ N + ++++
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 297 NGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLS 356
N LCKEG++++ + IL KGLVP+EV YNT+++GYC++G+L A + M + G+
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMK 421
Query: 357 PNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRL 416
P+ + Y LI C+ G + A + ++M ++ + P+ +TY LI G+ + D+ + +
Sbjct: 422 PDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDI 481
Query: 417 LNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSR 476
L EM NG MP++V+Y LI C G ++ +A V M +G++P V Y+ +I G
Sbjct: 482 LKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCS 541
Query: 477 SQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFT 536
+++ AF +EM++KG+ + +TY++LI GL +++EA +L E+ +G+ PD FT
Sbjct: 542 KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFT 601
Query: 537 YTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLF 596
Y +LI+ Y G++ + + L++EM + G P + TY +LI+ K E +L +LF
Sbjct: 602 YNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-----EGIELTERLF 656
Query: 597 YDESVPSDV-IYN--------------------TLIENCTNIEFQNVAALLKGFCMKGLM 635
+ S+ D+ +YN +IE ++ +L+ G G +
Sbjct: 657 GEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKL 716
Query: 636 NEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVL 695
E + + M R P Y+II+ GH +V + AY Y++M GF+ L
Sbjct: 717 CEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNEL 776
Query: 696 VKALHTAGMNEELSQVIENI 715
V L ++E VI +
Sbjct: 777 VSGLKEEWRSKEAEIVISEM 796
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/377 (32%), Positives = 195/377 (51%), Gaps = 7/377 (1%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ + L ++ A VN K+ G P V +YN ++ GR ++ EM
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY---GRKYEFDKCFDILKEME 486
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ PNV +Y LI C L +ME V YN LIDG C G+I+
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
DAF+ ++M KGIE NL++YN +I+GL G+L E + +L EISRKGL PD TYN+L+
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+GY GN+ + + L+ EM R+G+ P + TY LI S+C + F +M L+
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEMS---LK 662
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P+ Y +++ ++ HG +++A+ L +M + TYN+LI G G++ + +
Sbjct: 663 PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSL 722
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
+ M + + P+ +Y+ I+ G ++ A+ REM EKG L D + L+ GL E
Sbjct: 723 IDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKE 782
Query: 512 QRRITEACELFQEMLSR 528
+ R EA + EM R
Sbjct: 783 EWRSKEAEIVISEMNGR 799
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 235/506 (46%), Gaps = 23/506 (4%)
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
D F LR+ +GI P+ S ++++ L K + + T + I P + Y +
Sbjct: 130 DLFFALRN---EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAI 186
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
K ++ + L L M + + P+V Y LI+ +CK +N A + FD+M R L
Sbjct: 187 QAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLL 246
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P+ TY TLI+G+ + G ++++++ M + PS++T+N L+KG G VEDA V
Sbjct: 247 PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENV 306
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
L M G PD ++S + G+S +++ + A V+ GV + T S L++ LC+
Sbjct: 307 LKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
+ +I +A E+ +++G+ P+E Y T+I+ YC +GD+ A + M ++G PD +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 572 YSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI---------ENCTNI----- 617
Y+ LI + A+K + K+ PS YN LI + C +I
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 618 ---EFQNVAA---LLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQ 671
NV + L+ C + EA V M R P +Y+++I G G ++
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 672 KAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLV 731
A+ K+M++ G + VT L+ L G E ++ I R D L+
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLI 606
Query: 732 EINHKEGNMDAVLNVLTEMAKDGLLP 757
GN+ + + EM + G+ P
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKP 632
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 157/383 (40%), Gaps = 20/383 (5%)
Query: 396 TYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGM 455
+Y L ++ + EA L + G PS + L+ + + V +
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 456 ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRI 515
P Y I + ++ K + M + P Y+ LI GLC+ +R+
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 516 TEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVL 575
+A +LF EML+R + P TY TLI+ YC G+ ++ ++ + M P ++T++ L
Sbjct: 231 NDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTL 290
Query: 576 INGLNKQARTMEAKKLLLKLFYDESVPSDV--------------------IYNTLIENCT 615
+ GL K +A+ +L ++ VP +Y T +++
Sbjct: 291 LKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGV 350
Query: 616 NIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYD 675
+ + LL C +G + +A+ + + + +PNE +Y+ +I G+ + G++ A
Sbjct: 351 KMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARM 410
Query: 676 LYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINH 735
+ M + G P + L++ G E + + + E +L+
Sbjct: 411 KIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYG 470
Query: 736 KEGNMDAVLNVLTEMAKDGLLPN 758
++ D ++L EM +G +PN
Sbjct: 471 RKYEFDKCFDILKEMEDNGTMPN 493
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 132/316 (41%), Gaps = 31/316 (9%)
Query: 444 RVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYS 503
R+E A GVL + R P F+ +EL AF + L +Y
Sbjct: 70 RIETARGVLSSLLRSDSTP-----------FASPKELFSAFS-----LSSPSLKHDFSYL 113
Query: 504 SLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQK 563
L L E + I+EA +LF + + G+ P + T L++ + + +++
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 564 GFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA 623
F P Y I K + + +L ++ +D PS IYN LI+
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID----------- 222
Query: 624 ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRS 683
G C MN+A+++F+ ML R +P+ Y+ +I G+ K GN +K++ + ++M
Sbjct: 223 ----GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 684 GFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAV 743
P +T L+K L AGM E+ V++ + + DA +L + +A
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 744 LNVLTEMAKDGLLPNS 759
L V G+ N+
Sbjct: 339 LGVYETAVDSGVKMNA 354
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 7/215 (3%)
Query: 176 GFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
G P V +YN+++ +G V+ +Y EM +S + P + TY++LI C +
Sbjct: 594 GLKPDVFTYNSLISGYGFAGN---VQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGI 649
Query: 236 EMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVI 295
E+ R F EM + +++ YN ++ Y G ++ AF L + M K I + +YN +
Sbjct: 650 ELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSL 706
Query: 296 INGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGL 355
I G K G+L E + +++E++ + + P+ TYN ++ G+C+ + A V + EM G
Sbjct: 707 ILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGF 766
Query: 356 SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVREL 390
+V L++ + + A +M+ R L
Sbjct: 767 LLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRML 801
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/586 (30%), Positives = 304/586 (51%), Gaps = 21/586 (3%)
Query: 153 VKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGK 212
+KS+ + A+ ++N G V++Y ++ N+ E++ +M
Sbjct: 153 MKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEE---NFKAEGYELFGKMLA 209
Query: 213 SRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDD 272
S VS + T+N L+R C GD++ + ++ K L N+ TYN I G C+ G +D
Sbjct: 210 SGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDG 269
Query: 273 AFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLN 332
A +++ + +G +P++I+YN +I GLCK + +E + L ++ +GL PD TYNTL+
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIA 329
Query: 333 GYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRP 392
GYCK G + A + + V NG P+ TY SLI+ +C G NRA+ F++ + ++P
Sbjct: 330 GYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 393 NEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVL 452
N Y TLI G S G + EA +L NEM++ G +P + T+N L+ G C G V DA G++
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 453 HGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQ 512
M KG PD+ +++ +I G+S +++ A + M++ GV PD TY+SL++GLC+
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 513 RRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTY 572
+ + E ++ M+ +G +P+ FT+ L+ + C + +AL L +EM K PD VT+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 573 SVLINGLNKQARTMEAKKLLLKLFYDESVPSDV-IYNTLIENCTNIEFQNVAALLKGFCM 631
LI+G K A L K+ V S YN +I T E NV
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT--EKLNVTM------- 620
Query: 632 KGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVT 691
A+++F+ M+ R P+ Y +++ G K GNV Y +M+ +GF+P T
Sbjct: 621 ------AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Query: 692 IIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKE 737
+ ++ L E + +I +++ + +A + +++ KE
Sbjct: 675 LGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA--VNTICDVDKKE 718
Score = 295 bits (755), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 187/694 (26%), Positives = 340/694 (48%), Gaps = 36/694 (5%)
Query: 66 LLKTQSDQTLTLKFLKWAQPQPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDD 125
++K Q D L+ + + F L ++ K Y + + + L VD+ +
Sbjct: 13 VIKCQKDPMKALEMFNSMRKEVGFKHTLSTYR-SVIEKLGYYGKFEAMEEVL-VDMRENV 70
Query: 126 GNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYN 185
GN H+ + A+ K+Y + +AVN+ + P V SYN
Sbjct: 71 GN----------HMLEGVYVGAM-----KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYN 115
Query: 186 AILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEM 245
AI+ ++ SG + A +VY M ++P+VY++ + ++ FC LR + M
Sbjct: 116 AIMSVLVDSG---YFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 246 EKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRL 305
C NVV Y T++ G+ + + ++L M G+ L ++N ++ LCK+G +
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 306 KETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSL 365
KE + +L+++ ++G++P+ TYN + G C+ G L A+ + ++ G P+V+TY +L
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 366 INSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGF 425
I +CK+ A + +M L P+ TY TLI G+ + G + A R++ + NGF
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF 352
Query: 426 MPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFD 485
+P TY +LI G C G A+ + + KG+ P+V+ Y+T+I G S + +A
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 486 TKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYC 545
EM EKG++P+ T++ L++GLC+ +++A L + M+S+G PD FT+ LI+ Y
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Query: 546 TEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDV 605
T+ + AL + D M+ G PDV TY+ L+NGL K ++ + +
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVME--------------- 517
Query: 606 IYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHS 665
Y T++E LL+ C ++EA + E M ++ P+ + +I G
Sbjct: 518 TYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFC 577
Query: 666 KVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQ-VIENILRSCRLSDA 724
K G++ AY L++KM + V + ++ T +N +++ + + ++ C D
Sbjct: 578 KNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDG 637
Query: 725 ELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+++V+ K GN++ L EM ++G +P+
Sbjct: 638 YTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 143/561 (25%), Positives = 264/561 (47%), Gaps = 21/561 (3%)
Query: 203 AEEVYNEMGKS-RVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKN---NCLANVVTYN 258
A E++N M K + TY +I G E +M +N + L V Y
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--YV 80
Query: 259 TLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRK 318
+ Y + G++ +A + M EP + SYN I++ L G + + + +
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 319 GLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRA 378
G+ PD ++ + +CK H AL L M G NVV Y +++ +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 379 MEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKG 438
E F +M + T+ L+ + G + E +LL+++ K G +P++ TYN I+G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 439 HCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPD 498
C G ++ AV ++ + +G PDV++Y+ +I G ++ + +A +MV +G+ PD
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 499 TITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHD 558
+ TY++LI G C+ + A + + + G PD+FTY +LI+ C EG+ +AL L +
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 559 EMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIE 618
E + KG P+V+ Y+ LI GL+ Q +EA +L ++ +P E
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIP---------------E 425
Query: 619 FQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYK 678
Q L+ G C G +++AD + ++M+ + + P+ ++I+IHG+S ++ A ++
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 679 KMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEG 738
M+ +G P T L+ L E++ + + ++ + +L+E +
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 739 NMDAVLNVLTEMAKDGLLPNS 759
+D L +L EM + P++
Sbjct: 546 KLDEALGLLEEMKNKSVNPDA 566
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 39/351 (11%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ H ++A+ + N A G P V+ YN ++ + G + A ++ NEM
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG---MILEAAQLANEMS 418
Query: 212 KSRVSPNVYTYNVLIRGFCGVG-----------------------------------DLE 236
+ + P V T+N+L+ G C +G +E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 237 MGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVII 296
L M N +V TYN+L++G CK + +D + + M KG PNL ++N+++
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 297 NGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRN-GL 355
LC+ +L E G+L E+ K + PD VT+ TL++G+CK G+L A L +M +
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598
Query: 356 SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYR 415
S + TY +I++ + N+ A + F +M R L P+ TY +++GF + G ++ Y+
Sbjct: 599 SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYK 658
Query: 416 LLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVS 466
L EM +NGF+PS+ T +I C RV +A G++H M +KGL P+ V+
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 127/245 (51%), Gaps = 4/245 (1%)
Query: 149 IDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYN 208
++++ YS ++ A+ I+++ +G P V +YN++L+ + ++ + V E Y
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM---ETYK 520
Query: 209 EMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLG 268
M + +PN++T+N+L+ C L+ L EM+ + + VT+ TLIDG+CK G
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 269 RIDDAFKLLRDM-GLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTY 327
+D A+ L R M + + +YN+II+ ++ + + + E+ + L PD TY
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 328 NTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHV 387
+++G+CK GN++ EM+ NG P++ T +IN +C + A +M
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 388 RELRP 392
+ L P
Sbjct: 701 KGLVP 705
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 297 bits (760), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/604 (29%), Positives = 307/604 (50%), Gaps = 26/604 (4%)
Query: 107 YKSAQTLAQNLAVDLPRDDGNFVFSCLKETYHLCDSTSSSAVIDL--VVKSYSHLNMIDK 164
Y + L++N +L DD +F + S ++I+ ++ + + +N D
Sbjct: 46 YDYREKLSRNGLSELKLDDAVALFG------EMVKSRPFPSIIEFSKLLSAIAKMNKFDV 99
Query: 165 AVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNV 224
+++ + G +Y+ +++ R + + A V +M K PN+ T +
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQ---LPLALAVLGKMMKLGYEPNIVTLSS 156
Query: 225 LIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKG 284
L+ G+C + + +M N VT+NTLI G + +A L+ M KG
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 285 IEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQAL 344
+P+L++Y V++NGLCK G +LN++ + L P + YNT+++G CK ++ AL
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 345 VLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGF 404
L EM G+ PNVVTY+SLI+ +C G + A M R++ P+ T++ LI+ F
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 405 SQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDV 464
+ G L EA +L +EM K PSIVTY++LI G C R+++A + M K PDV
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 465 VSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQE 524
V+Y+T+I GF + + +++ + REM ++G++ +T+TY+ LI GL + A E+F+E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 525 MLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQAR 584
M+S G+ P+ TY TL++ C G + +A+ + + + + P + TY+++I G+ K +
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 585 TMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFEL 644
+ L L P V YNT+I GFC KG EAD +F+
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMIS---------------GFCRKGSKEEADALFKE 561
Query: 645 MLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGM 704
M + +PN Y+ +I + G+ + + +L K+M GF TI ++ LH +
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 621
Query: 705 NEEL 708
++
Sbjct: 622 DKSF 625
Score = 282 bits (722), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 287/564 (50%), Gaps = 19/564 (3%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A ++ EM KSR P++ ++ L+ + ++ + +M+ N TY+ LI+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ A +L M G EPN+++ + ++NG C R+ E +++++ G P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+ VT+NTL++G +A+ L MV G P++VTY ++N +CK G+ + A
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
++M +L P Y T+I+G ++ +D+A L EM G P++VTY++LI C
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR DA +L M + + PDV ++S +I F + +L +A EMV++ + P +TY
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
SSLI+G C R+ EA ++F+ M+S+ PD TY TLI +C + + + + EM Q
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+G + + VTY++LI GL + A+++ ++ D P+ + YNTL++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD---------- 474
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHM-PNEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
G C G + +A VFE LQR+ M P Y+I+I G K G V+ +DL+ +
Sbjct: 475 -----GLCKNGKLEKAMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 682 RSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMD 741
G P V ++ G EE + + + L ++ L+ ++G+ +
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 742 AVLNVLTEMAKDGLLPNSGRSTYG 765
A ++ EM G ++ ST G
Sbjct: 589 ASAELIKEMRSCGFAGDA--STIG 610
Score = 268 bits (686), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 261/527 (49%), Gaps = 50/527 (9%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L +M P++I ++ +++ + K + + ++ G+ + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
L+N +C+ L AL + +M++ G PN+VT +SL+N C S ++ A+ DQM V
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+PN T+ TLI+G H EA L++ M G P +VTY ++ G C G + A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+L+ M + L P V+ Y+TII G + + +D A + +EM KG+ P+ +TYSSLI
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC R ++A L +M+ R ++PD FT++ LI+A+ EG + +A +L+DEM+++ P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+VTYS LING R EAK++ + P V YNTLI KG
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI---------------KG 405
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
FC + E VF M QR + N Y+I+I G + G+ A +++K+MV G P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRS-----------------------------C 719
+T L+ L G E+ V E + RS C
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 720 RLSDAELAKVLVEINH------KEGNMDAVLNVLTEMAKDGLLPNSG 760
LS + +V N ++G+ + + EM +DG LPNSG
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 176/378 (46%), Gaps = 21/378 (5%)
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
NG S+ LD+A L EM K+ PSI+ ++ L+ + + + + M G+
Sbjct: 55 NGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
+ +YS +I+ F R +L A +M++ G P+ +T SSL++G C +RI+EA L
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNK 581
+M G P+ T+ TLI+ +A+ L D M+ KG PD+VTY V++NGL K
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Query: 582 QARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA------------------ 623
+ T A LL K+ + P +IYNT+I+ + + A
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 624 --ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
+L+ C G ++A R+ M++R P+ + +I K G + +A LY +MV
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 682 RSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMD 741
+ P VT L+ +E Q+ E ++ D L++ K ++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 742 AVLNVLTEMAKDGLLPNS 759
+ V EM++ GL+ N+
Sbjct: 414 EGMEVFREMSQRGLVGNT 431
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 168/474 (35%), Positives = 260/474 (54%), Gaps = 9/474 (1%)
Query: 137 YHLCDSTSSSA---VIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIR 193
++L +S +S + ++++ SY ++ +++ N +GF+PG +N +L V+
Sbjct: 82 HYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG 141
Query: 194 SGR-NNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLA 252
S N W F +NE KS+V +VY++ +LI+G C G++E E+ +
Sbjct: 142 SSSFNQWWSF----FNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSP 196
Query: 253 NVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGIL 312
NVV Y TLIDG CK G I+ A L +MG G+ N +Y V+INGL K G K+ +
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMY 256
Query: 313 NEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKS 372
++ G+ P+ TYN ++N CK+G A + EM G+S N+VTY +LI +C+
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 373 GNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTY 432
LN A + DQM + PN TY TLI+GF G L +A L ++ G PS+VTY
Sbjct: 317 MKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 433 NALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE 492
N L+ G C G A ++ M +G+ P V+Y+ +I F+RS ++KA + M E
Sbjct: 377 NILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE 436
Query: 493 KGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQ 552
G++PD TYS LIHG C + ++ EA LF+ M+ + P+E Y T+I YC EG +
Sbjct: 437 LGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 553 ALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVI 606
AL+L EM +K P+V +Y +I L K+ ++ EA++L+ K+ PS I
Sbjct: 497 ALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 137/462 (29%), Positives = 244/462 (52%), Gaps = 16/462 (3%)
Query: 257 YNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEIS 316
Y +I+ Y + ++ + +M G P +N ++ + + NE +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 317 RKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLN 376
+ +V D ++ L+ G C+ G + ++ L E+ G SPNVV YT+LI+ CK G +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 377 RAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALI 436
+A + F +M L NE+TYT LING ++G + + + +M ++G P++ TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 437 KGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVL 496
C GR +DA V M +G++ ++V+Y+T+I G R +L++A +M G+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 497 PDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRL 556
P+ ITY++LI G C ++ +A L +++ SRG+SP TY L++ +C +GD A ++
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 557 HDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTN 616
EM ++G P VTY++LI+ + +A +L L + VP Y+ LI
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIH---- 451
Query: 617 IEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDL 676
GFC+KG MNEA R+F+ M+++N PNE +Y+ +I G+ K G+ +A L
Sbjct: 452 -----------GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 677 YKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRS 718
K+M P+ + +++ L ++E +++E ++ S
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 219/439 (49%), Gaps = 18/439 (4%)
Query: 327 YNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMH 386
Y ++N Y + +L+ ++ EMV NG P + L+ + S + N+ FF++ +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 387 VRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVE 446
++ + ++ LI G + G +++++ LL E+T+ GF P++V Y LI G C G +E
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 447 DAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLI 506
A + M + GL + +Y+ +I+G ++ + F+ +M E GV P+ TY+ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 507 HGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFL 566
+ LC+ R +A ++F EM RG+S + TY TLI C E + +A ++ D+M G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 567 PDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALL 626
P+++TY+ LI+G + +A L L PS V YN L+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS-------------- 381
Query: 627 KGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFV 686
GFC KG + A ++ + M +R P++ Y I+I ++ N++KA L M G V
Sbjct: 382 -GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLV 440
Query: 687 PHTVTIIVLVKALHTAGMNEELSQVIENIL-RSCRLSDAELAKVLVEINHKEGNMDAVLN 745
P T VL+ G E S++ ++++ ++C ++ + ++ KEG+ L
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV-IYNTMILGYCKEGSSYRALK 499
Query: 746 VLTEMAKDGLLPNSGRSTY 764
+L EM + L PN Y
Sbjct: 500 LLKEMEEKELAPNVASYRY 518
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 280/553 (50%), Gaps = 15/553 (2%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ +M SR P V ++ L ++ L +ME N+ T + +I+
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ AF + + G EPN I+++ +INGLC EGR+ E +++ + G P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D +T NTL+NG C G +A++L +MV G PN VTY ++N MCKSG AME
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M R ++ + Y+ +I+G +HG LD A+ L NEM G +I+TYN LI G C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNA 311
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR +D +L M ++ + P+VV++S +I F + +L +A + +EM+ +G+ PDTITY
Sbjct: 312 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 371
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+SLI G C++ + +A ++ M+S+G P+ T+ LIN YC I L L +M
Sbjct: 372 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 431
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+G + D VTY+ LI G + + AK+L ++ + P+ V Y L++
Sbjct: 432 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD---------- 481
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
G C G +A +FE + + + +Y+IIIHG V A+DL+ +
Sbjct: 482 -----GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 683 SGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDA 742
G P T +++ L G E + + D +L+ + +G+
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 743 VLNVLTEMAKDGL 755
+ ++ E+ + G
Sbjct: 597 SVKLIEELKRCGF 609
Score = 272 bits (695), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 240/427 (56%), Gaps = 10/427 (2%)
Query: 154 KSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKS 213
K + +IDK V +G P ++Y +L+ + +SG+ A E+ +M +
Sbjct: 208 KEAEAMLLIDKMVE-------YGCQPNAVTYGPVLNVMCKSGQT---ALAMELLRKMEER 257
Query: 214 RVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDA 273
+ + Y+++I G C G L+ F+EME N++TYN LI G+C GR DD
Sbjct: 258 NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 274 FKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNG 333
KLLRDM + I PN+++++V+I+ KEG+L+E + + E+ +G+ PD +TY +L++G
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 334 YCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPN 393
+CKE +L +A + MV G PN+ T+ LIN CK+ ++ +E F +M +R + +
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Query: 394 EKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLH 453
TY TLI GF + G L+ A L EM P+IVTY L+ G C G E A+ +
Sbjct: 438 TVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFE 497
Query: 454 GMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQR 513
+ + + D+ Y+ II G + ++D A+D + KGV P TY+ +I GLC++
Sbjct: 498 KIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 514 RITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYS 573
++EA LF++M G +PD +TY LI A+ +GD ++++L +E+ + GF D T
Sbjct: 558 PLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIK 617
Query: 574 VLINGLN 580
++I+ L+
Sbjct: 618 MVIDMLS 624
Score = 259 bits (663), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 142/436 (32%), Positives = 235/436 (53%), Gaps = 3/436 (0%)
Query: 176 GFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
G+ P ++++ +++ + GR V A E+ + M + P++ T N L+ G C G
Sbjct: 153 GYEPNTITFSTLINGLCLEGR---VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 236 EMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVI 295
+ +M + C N VTY +++ CK G+ A +LLR M + I+ + + Y++I
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 296 INGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGL 355
I+GLCK G L + NE+ KG+ + +TYN L+ G+C G L +M++ +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 356 SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYR 415
+PNVVT++ LI+S K G L A E +M R + P+ TYT+LI+GF + LD+A +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 416 LLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFS 475
+++ M G P+I T+N LI G+C R++D + + M+ +G+ D V+Y+T+I GF
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 476 RSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEF 535
+L+ A + +EMV + V P+ +TY L+ GLC+ +A E+F+++ M D
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 536 TYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKL 595
Y +I+ C + A L + KG P V TY+++I GL K+ EA+ L K+
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 596 FYDESVPSDVIYNTLI 611
D P YN LI
Sbjct: 570 EEDGHAPDGWTYNILI 585
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 244/496 (49%), Gaps = 17/496 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
+ DDA L RDM P +I ++ + + + K + + ++ KG+ + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
++N +C+ L A ++++ G PN +T+++LIN +C G ++ A+E D+M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+P+ T TL+NG G EA L+++M + G P+ VTY ++ C G+ A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L M + + D V YS II G + LD AF+ EM KG+ + ITY+ LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
C R + +L ++M+ R ++P+ T++ LI+++ EG + +A LH EMI +G PD
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+TY+ LI+G K+ +A +++ + P+ +N LI G
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN---------------G 412
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
+C +++ +F M R + + Y+ +I G ++G + A +L+++MV P+
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
VT +L+ L G +E+ ++ E I +S D + +++ +D ++
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 749 EMAKDGLLPNSGRSTY 764
+ G+ P G TY
Sbjct: 533 SLPLKGVKP--GVKTY 546
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 193/373 (51%), Gaps = 7/373 (1%)
Query: 141 DSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWV 200
D+ S +ID + K S +D A N+ N ++ G +++YN ++ +GR W
Sbjct: 262 DAVKYSIIIDGLCKHGS----LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR--WD 315
Query: 201 KFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTL 260
A+ + +M K +++PNV T++VLI F G L EM + +TY +L
Sbjct: 316 DGAK-LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Query: 261 IDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGL 320
IDG+CK +D A +++ M KG +PN+ ++N++ING CK R+ + + ++S +G+
Sbjct: 375 IDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
Query: 321 VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAME 380
V D VTYNTL+ G+C+ G L+ A L EMV + PN+VTY L++ +C +G +A+E
Sbjct: 435 VADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALE 494
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
F+++ ++ + Y +I+G +D+A+ L + G P + TYN +I G C
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
G + +A + M G APD +Y+ +I + K+ E+ G D
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Query: 501 TYSSLIHGLCEQR 513
T +I L + R
Sbjct: 615 TIKMVIDMLSDGR 627
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 153/330 (46%), Gaps = 15/330 (4%)
Query: 430 VTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
++Y ++ + +DA+ + M P V+ +S + S +++++ D ++
Sbjct: 54 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
M KG+ + T S +I+ C R++ A +++ G P+ T++TLIN C EG
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNT 609
+ +AL L D M++ G PD++T + L+NGL + EA L+ K+ P+ V Y
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY-- 231
Query: 610 LIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGN 669
+L C G A + M +RN + Y III G K G+
Sbjct: 232 -------------GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 670 VQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKV 729
+ A++L+ +M G + +T +L+ AG ++ ++++ ++++ + V
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 730 LVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
L++ KEG + + EM G+ P++
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/490 (31%), Positives = 268/490 (54%), Gaps = 18/490 (3%)
Query: 226 IRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGI 285
+R G+LE G +F M + + +++ TLI G+C+LG+ A K+L + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 286 EPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALV 345
P++I+YNV+I+G CK G + +L+ +S + PD VTYNT+L C G L QA+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 346 LHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFS 405
+ M++ P+V+TYT LI + C+ + AM+ D+M R P+ TY L+NG
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 406 QHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVV 465
+ G LDEA + LN+M +G P+++T+N +++ C+ GR DA +L M RKG +P VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 466 SYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEM 525
+++ +I+ R L +A D +M + G P++++Y+ L+HG C+++++ A E + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 526 LSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQART 585
+SRG PD TY T++ A C +G + A+ + +++ KG P ++TY+ +I+GL K +T
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 586 MEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELM 645
+A KLL ++ + P + Y++L+ G +G ++EA + F
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLV---------------GGLSREGKVDEAIKFFHEF 510
Query: 646 LQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMN 705
+ PN ++ I+ G K +A D M+ G P+ + +L++ L GM
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570
Query: 706 EELSQVIENI 715
+E +++ +
Sbjct: 571 KEALELLNEL 580
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 249/444 (56%), Gaps = 6/444 (1%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ + L KA I+ + + G +P V++YN ++ ++G N A V + M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINN---ALSVLDRMS 199
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
VSP+V TYN ++R C G L+ + M + +C +V+TY LI+ C+ +
Sbjct: 200 ---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
A KLL +M +G P++++YNV++NG+CKEGRL E LN++ G P+ +T+N +L
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
C G A L A+M+R G SP+VVT+ LIN +C+ G L RA++ ++M +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
PN +Y L++GF + +D A L M G P IVTYN ++ C G+VEDAV +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
L+ ++ KG +P +++Y+T+I G +++ + KA EM K + PDTITYSSL+ GL
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
+ ++ EA + F E G+ P+ T+ +++ C +A+ MI +G P+ +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 572 YSVLINGLNKQARTMEAKKLLLKL 595
Y++LI GL + EA +LL +L
Sbjct: 557 YTILIEGLAYEGMAKEALELLNEL 580
Score = 278 bits (710), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 243/427 (56%), Gaps = 11/427 (2%)
Query: 145 SSAVIDLV-----VKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNW 199
S AV D++ + Y I+ A+++++ V P V++YN IL S+ SG+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK--- 219
Query: 200 VKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNT 259
+K A EV + M + P+V TY +LI C + ++ EM C +VVTYN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 260 LIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKG 319
L++G CK GR+D+A K L DM G +PN+I++N+I+ +C GR + + +L ++ RKG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 320 LVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAM 379
P VT+N L+N C++G L +A+ + +M ++G PN ++Y L++ CK ++RA+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 380 EFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGH 439
E+ ++M R P+ TY T++ + G +++A +LN+++ G P ++TYN +I G
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 440 CTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDT 499
G+ A+ +L M K L PD ++YS+++ G SR ++D+A E G+ P+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 500 ITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDE 559
+T++S++ GLC+ R+ A + M++RG P+E +YT LI EG +AL L +E
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 579
Query: 560 MIQKGFL 566
+ KG +
Sbjct: 580 LCNKGLM 586
Score = 196 bits (499), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 215/454 (47%), Gaps = 37/454 (8%)
Query: 313 NEISRKGLVPDEVTYNTLLNGYCKE-GNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 371
+++ GL + TL +GY GN H + V + + V + + M +
Sbjct: 61 SKVESSGLNGRAQKFETLSSGYSNSNGNGHYS------SVNSSFALEDVESNNHLRQMVR 114
Query: 372 SGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVT 431
+G L +F + M P+ TTLI GF + G +A ++L + +G +P ++T
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 432 YNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMV 491
YN +I G+C G + +A+ VL M+ ++PDVV+Y+TI+ S +L +A + M+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 492 EKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIP 551
++ PD ITY+ LI C + A +L EM RG +PD TY L+N C EG +
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 552 QALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI 611
+A++ ++M G P+V+T+++++ + R M+A+KLL + PS V +N LI
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 612 ENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQ 671
C KGL+ A + E M Q PN Y+ ++HG K +
Sbjct: 352 NF---------------LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 672 KAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLV 731
+A + ++MV G P VT ++ AL G E+ +++ +LS + VL+
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILN------QLSSKGCSPVLI 450
Query: 732 EIN------HKEGNMDAVLNVLTEMAKDGLLPNS 759
N K G + +L EM L P++
Sbjct: 451 TYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDT 484
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/437 (26%), Positives = 211/437 (48%), Gaps = 18/437 (4%)
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
++V N L + G L + MV +G P+++ T+LI C+ G +A +
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+ + P+ TY +I+G+ + G ++ A +L+ M+ P +VTYN +++ C
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDS 217
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
G+++ A+ VL M ++ PDV++Y+ +I R + A EM ++G PD +TY
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+ L++G+C++ R+ EA + +M S G P+ T+ ++ + C+ G A +L +M++
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
KGF P VVT+++LIN L ++ A +L K+ P+ + YN
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYN-------------- 383
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
LL GFC + M+ A E M+ R P+ Y+ ++ K G V+ A ++ ++
Sbjct: 384 -PLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 683 SGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDA 742
G P +T ++ L AG + ++++ + D LV +EG +D
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 743 VLNVLTEMAKDGLLPNS 759
+ E + G+ PN+
Sbjct: 503 AIKFFHEFERMGIRPNA 519
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 282/575 (49%), Gaps = 59/575 (10%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ +M +SR P V +N L E+ L +ME ++ T + +I+
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ AF + + G EP+ + +N ++NGLC E R+ E +++ + G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+T NTL+NG C G + A+VL MV G PN VTY ++N MCKSG AME
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M R ++ + Y+ +I+G + G LD A+ L NEM GF I+TYN LI G C
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR +D +L M ++ ++P+VV++S +I F + +L +A +EM+++G+ P+TITY
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+SLI G C++ R+ EA ++ M+S+G PD T+ LIN YC I L L EM
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-CTNIEFQN 621
+G + + VTY+ L+ G + + AKKL ++ P V Y L++ C N E +
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 622 VAAL----------------------------------------LKG------------- 628
+ LKG
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 629 -FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVP 687
C K +++AD +F M + H P+E Y+I+I H + A +L ++M SGF P
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF-P 610
Query: 688 HTVTIIVLVKALHTAGMNEELSQVIENILRSCRLS 722
V+ + +V + ++G EL + ++L + R S
Sbjct: 611 ADVSTVKMVINMLSSG---ELDKSFLDMLSTTRAS 642
Score = 281 bits (719), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 237/419 (56%), Gaps = 3/419 (0%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+ AV +++ GF P ++Y +L+ + +SG+ A E+ +M + + +
Sbjct: 209 VSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT---ALAMELLRKMEERNIKLDAVK 265
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
Y+++I G C G L+ F+EME A+++TYNTLI G+C GR DD KLLRDM
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
+ I PN+++++V+I+ KEG+L+E +L E+ ++G+ P+ +TYN+L++G+CKE L
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
+A+ + M+ G P+++T+ LIN CK+ ++ +E F +M +R + N TY TL+
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
GF Q G L+ A +L EM P IV+Y L+ G C G +E A+ + + + +
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKME 505
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
D+ Y II G + ++D A+D + KGV D Y+ +I LC + +++A L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADIL 565
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
F++M G +PDE TY LI A+ + D A L +EM GF DV T ++IN L+
Sbjct: 566 FRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 249 bits (637), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 258/517 (49%), Gaps = 26/517 (5%)
Query: 118 AVDLPRD-----------DGNFVFSCLKETYH------LCDSTSSSAV------IDLVVK 154
AVDL RD D N +FS + +T LC S + + +++
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 155 SYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSR 214
+ + A + + G+ P + +N +L+ + R V A E+ + M +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR---VSEALELVDRMVEMG 188
Query: 215 VSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAF 274
P + T N L+ G C G + + M + N VTY +++ CK G+ A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 275 KLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGY 334
+LLR M + I+ + + Y++II+GLCK+G L + NE+ KG D +TYNTL+ G+
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 335 CKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNE 394
C G L +M++ +SPNVVT++ LI+S K G L A + +M R + PN
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNT 368
Query: 395 KTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHG 454
TY +LI+GF + L+EA ++++ M G P I+T+N LI G+C R++D + +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 455 MARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRR 514
M+ +G+ + V+Y+T++ GF +S +L+ A +EMV + V PD ++Y L+ GLC+
Sbjct: 429 MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 515 ITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSV 574
+ +A E+F ++ M D Y +I+ C + A L + KG D Y++
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 575 LINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI 611
+I+ L ++ +A L K+ + P ++ YN LI
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILI 585
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 224/450 (49%), Gaps = 15/450 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
+ DDA L RDM P +I +N + + + K + + + ++ KG+ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
++N +C+ L A ++++ G P+ V + +L+N +C ++ A+E D+M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+P T TL+NG +G + +A L++ M + GF P+ VTY ++ C G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L M + + D V YS II G + LD AF+ EM KG D ITY++LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
C R + +L ++M+ R +SP+ T++ LI+++ EG + +A +L EM+Q+G P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+TY+ LI+G K+ R EA +++ + P + +N LI G
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILI---------------NG 412
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
+C +++ +F M R + N Y+ ++ G + G ++ A L+++MV P
Sbjct: 413 YCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRS 718
V+ +L+ L G E+ ++ I +S
Sbjct: 473 IVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 171/306 (55%), Gaps = 4/306 (1%)
Query: 179 PGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMG 238
P V++++ ++DS ++ G+ ++ A+++ EM + ++PN TYN LI GFC LE
Sbjct: 331 PNVVTFSVLIDSFVKEGK---LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 239 LRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIING 298
++ M C +++T+N LI+GYCK RIDD +L R+M L+G+ N ++YN ++ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 299 LCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPN 358
C+ G+L+ K + E+ + + PD V+Y LL+G C G L +AL + ++ ++ + +
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 359 VVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLN 418
+ Y +I+ MC + ++ A + F + ++ ++ + + Y +I+ + L +A L
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFR 567
Query: 419 EMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQ 478
+MT+ G P +TYN LI+ H A ++ M G DV + +I+ S S
Sbjct: 568 KMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS-SG 626
Query: 479 ELDKAF 484
ELDK+F
Sbjct: 627 ELDKSF 632
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 173/380 (45%), Gaps = 18/380 (4%)
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
F D + R L P + L + ++ + L +M G SI T + +I C
Sbjct: 76 FRDMIQSRPL-PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFC 134
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
++ A + + + G PD V ++T+++G + +A + MVE G P I
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 501 TYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEM 560
T ++L++GLC ++++A L M+ G P+E TY ++N C G A+ L +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 561 IQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVI-YNTLIENCTNIEF 619
++ D V YS++I+GL K A L ++ + +D+I YNTLI
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI-KGFKADIITYNTLI-------- 305
Query: 620 QNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKK 679
GFC G ++ ++ M++R PN + ++I K G +++A L K+
Sbjct: 306 -------GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 680 MVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGN 739
M++ G P+T+T L+ EE Q+++ ++ D +L+ K
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 740 MDAVLNVLTEMAKDGLLPNS 759
+D L + EM+ G++ N+
Sbjct: 419 IDDGLELFREMSLRGVIANT 438
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/564 (30%), Positives = 289/564 (51%), Gaps = 50/564 (8%)
Query: 168 IVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIR 227
++ + V+ P SYN +L+ ++ SG N K A V+ +M ++ P ++T+ V+++
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLE-ILVSG--NCHKVAANVFYDMLSRKIPPTLFTFGVVMK 225
Query: 228 GFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEP 287
FC V +++ L +M K+ C+ N V Y TLI K R+++A +LL +M L G P
Sbjct: 226 AFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 285
Query: 288 NLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCK----------- 336
+ ++N +I GLCK R+ E ++N + +G PD++TY L+NG CK
Sbjct: 286 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Query: 337 --------------------EGNLHQALVLHAEMVRN-GLSPNVVTYTSLINSMCKSGNL 375
G L A + ++MV + G+ P+V TY SLI K G +
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405
Query: 376 NRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNAL 435
A+E M + +PN +YT L++GF + G +DEAY +LNEM+ +G P+ V +N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 436 IKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGV 495
I C R+ +AV + M RKG PDV +++++ISG E+ A R+M+ +GV
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 496 LPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALR 555
+ +T+TY++LI+ + I EA +L EM+ +G DE TY +LI C G++ +A
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585
Query: 556 LHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCT 615
L ++M++ G P ++ ++LINGL + EA + ++ S P V +N+LI
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI---- 641
Query: 616 NIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYD 675
G C G + + +F + P+ ++ ++ K G V A
Sbjct: 642 -----------NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACL 690
Query: 676 LYKKMVRSGFVPHTVTIIVLVKAL 699
L + + GFVP+ T +L++++
Sbjct: 691 LLDEGIEDGFVPNHRTWSILLQSI 714
Score = 277 bits (709), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/460 (33%), Positives = 257/460 (55%), Gaps = 9/460 (1%)
Query: 133 LKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVI 192
L E L + + V+ + I++A +VN + GF P ++Y +++ +
Sbjct: 274 LLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLC 333
Query: 193 RSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKN-NCL 251
+ GR V A++++ + K P + +N LI GF G L+ S+M + +
Sbjct: 334 KIGR---VDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 252 ANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGI 311
+V TYN+LI GY K G + A ++L DM KG +PN+ SY ++++G CK G++ E +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 312 LNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 371
LNE+S GL P+ V +N L++ +CKE + +A+ + EM R G P+V T+ SLI+ +C+
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 372 SGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVT 431
+ A+ M + N TY TLIN F + G + EA +L+NEM G +T
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEIT 566
Query: 432 YNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMV 491
YN+LIKG C G V+ A + M R G AP +S + +I+G RS +++A + ++EMV
Sbjct: 567 YNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMV 626
Query: 492 EKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIP 551
+G PD +T++SLI+GLC RI + +F+++ + G+ PD T+ TL++ C G +
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 552 QALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKL 591
A L DE I+ GF+P+ T+S+L+ + Q T++ ++
Sbjct: 687 DACLLLDEGIEDGFVPNHRTWSILLQSIIPQ-ETLDRRRF 725
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 187/359 (52%), Gaps = 6/359 (1%)
Query: 124 DDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLS 183
DD V S + +Y + + + ++ Y ++ A+ +++ + G P V S
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCT---YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 184 YNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFS 243
Y ++D + G+ + A V NEM + PN +N LI FC + + F
Sbjct: 427 YTILVDGFCKLGK---IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 244 EMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEG 303
EM + C +V T+N+LI G C++ I A LLRDM +G+ N ++YN +IN + G
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG 543
Query: 304 RLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYT 363
+KE + ++NE+ +G DE+TYN+L+ G C+ G + +A L +M+R+G +P+ ++
Sbjct: 544 EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCN 603
Query: 364 SLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKN 423
LIN +C+SG + A+EF +M +R P+ T+ +LING + G +++ + ++
Sbjct: 604 ILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 424 GFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDK 482
G P VT+N L+ C GG V DA +L G P+ ++S ++ + LD+
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/556 (23%), Positives = 239/556 (42%), Gaps = 88/556 (15%)
Query: 292 YNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCK--------------- 336
Y V+I L G K +L ++ +G+V E + +++ Y K
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 337 --------------------EGNLHQ-ALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNL 375
GN H+ A + +M+ + P + T+ ++ + C +
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 376 NRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNAL 435
+ A+ M PN Y TLI+ S+ ++EA +LL EM G +P T+N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 436 IKGHCTGGRVEDAVGVLHGMARKGLAPDVVSY---------------------------- 467
I G C R+ +A +++ M +G APD ++Y
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353
Query: 468 ---STIISGFSRSQELDKAFDTKREMVEK-GVLPDTITYSSLIHGLCEQRRITEACELFQ 523
+T+I GF LD A +MV G++PD TY+SLI+G ++ + A E+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 524 EMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQA 583
+M ++G P+ ++YT L++ +C G I +A + +EM G P+ V ++ LI+ K+
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 584 RTMEAKKLLLKLFYDESVPSDVIYNTLIEN-CTNIEFQNVAALLK--------------- 627
R EA ++ ++ P +N+LI C E ++ LL+
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 628 ----GFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRS 683
F +G + EA ++ M+ + +E Y+ +I G + G V KA L++KM+R
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 684 GFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAV 743
G P ++ +L+ L +GM EE + + ++ D L+ + G ++
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 744 LNVLTEMAKDGLLPNS 759
L + ++ +G+ P++
Sbjct: 654 LTMFRKLQAEGIPPDT 669
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 182/411 (44%), Gaps = 58/411 (14%)
Query: 352 RNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLD 411
+NG + Y LI + +G QM + E + +++ + + GF
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 412 EAYRLLNEMTKNGFM--PSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
+ RL+ EM +N + P+ +YN +++ +G + A V + M + + P + ++
Sbjct: 164 QTTRLMLEM-RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 222
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
++ F E+D A R+M + G +P+++ Y +LIH L + R+ EA +L +EM G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
PD T+ +I C I +A ++ + M+ +GF PD +TY L+NGL K R AK
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVF-ELMLQR 648
L FY P VI+NTLI GF G +++A V +++
Sbjct: 343 DL----FYRIPKPEIVIFNTLIH---------------GFVTHGRLDDAKAVLSDMVTSY 383
Query: 649 NHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEEL 708
+P+ Y+ +I+G+ K G V A ++ M G P+ + +LV
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGF--------- 434
Query: 709 SQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
C+L G +D NVL EM+ DGL PN+
Sbjct: 435 ----------CKL----------------GKIDEAYNVLNEMSADGLKPNT 459
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 163/501 (32%), Positives = 261/501 (52%), Gaps = 15/501 (2%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ M +SR P +N L ++ L F ME N ++ T +I+
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
YC+ ++ AF +L G EP+ I+++ ++NG C EGR+ E +++ + P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D VT +TL+NG C +G + +ALVL MV G P+ VTY ++N +CKSGN A++ F
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M R ++ + Y+ +I+ + G D+A L NEM G +VTY++LI G C
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
G+ +D +L M + + PDVV++S +I F + +L +A + EM+ +G+ PDTITY
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+SLI G C++ + EA ++F M+S+G PD TY+ LIN+YC + +RL E+
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
KG +P+ +TY+ L+ G + + AK+L ++ PS V Y
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY--------------- 458
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
LL G C G +N+A +FE M + +Y+IIIHG V A+ L+ +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 683 SGFVPHTVTIIVLVKALHTAG 703
G P VT V++ L G
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKG 539
Score = 279 bits (714), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 244/421 (57%), Gaps = 3/421 (0%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+ +A+ +++ +GF P ++Y +L+ + +SG + A +++ +M + + +V
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS---ALALDLFRKMEERNIKASVVQ 247
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
Y+++I C G + L F+EME A+VVTY++LI G C G+ DD K+LR+M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
+ I P++++++ +I+ KEG+L E K + NE+ +G+ PD +TYN+L++G+CKE LH
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
+A + MV G P++VTY+ LINS CK+ ++ M F ++ + L PN TY TL+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
GF Q G L+ A L EM G PS+VTY L+ G C G + A+ + M + +
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
+ Y+ II G + ++D A+ + +KGV PD +TY+ +I GLC++ ++EA L
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNK 581
F++M G +PD+FTY LI A+ + ++ L +EM GF D T ++I+ L+
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
Query: 582 Q 582
+
Sbjct: 608 R 608
Score = 203 bits (516), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/382 (31%), Positives = 205/382 (53%), Gaps = 11/382 (2%)
Query: 146 SAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEE 205
S VID + K S D A+++ N ++ G V++Y++++ + G+ W A+
Sbjct: 249 SIVIDSLCKDGS----FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK--WDDGAKM 302
Query: 206 VYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYC 265
+ +G++ + P+V T++ LI F G L ++EM + +TYN+LIDG+C
Sbjct: 303 LREMIGRN-IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 266 KLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEV 325
K + +A ++ M KG EP++++Y+++IN CK R+ + + EIS KGL+P+ +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 326 TYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQM 385
TYNTL+ G+C+ G L+ A L EMV G+ P+VVTY L++ +C +G LN+A+E F++M
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 386 HVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRV 445
+ Y +I+G +D+A+ L ++ G P +VTYN +I G C G +
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 446 EDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSL 505
+A + M G PD +Y+ +I L + + EM G D+ T +
Sbjct: 542 SEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Query: 506 IHGLCEQRRITEACELFQEMLS 527
I L + RR+ ++ F +MLS
Sbjct: 602 IDMLSD-RRLDKS---FLDMLS 619
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 258/478 (53%), Gaps = 10/478 (2%)
Query: 143 TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGR--NNWV 200
T S+ + DL+V+ L M+D+A+ L K GF P + N IL + R R N WV
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 201 KFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTL 260
Y +M + + NVYT+N++I C G L+ F ME +VTYNTL
Sbjct: 212 -----FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 261 IDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGL 320
+ G+ GRI+ A ++ +M KG +P++ +YN I++ +C EGR E +L E+ GL
Sbjct: 267 VQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGL 323
Query: 321 VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAME 380
VPD V+YN L+ G G+L A EMV+ G+ P TY +LI+ + + A
Sbjct: 324 VPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEI 383
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
++ + + + TY LING+ QHG +A+ L +EM +G P+ TY +LI C
Sbjct: 384 LIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLC 443
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
+ +A + + KG+ PD+V +T++ G +D+AF +EM + PD +
Sbjct: 444 RKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV 503
Query: 501 TYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEM 560
TY+ L+ GLC + + EA EL EM RG+ PD +Y TLI+ Y +GD A + DEM
Sbjct: 504 TYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 561 IQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIE 618
+ GF P ++TY+ L+ GL+K A++LL ++ + VP+D + ++IE +N++
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLD 621
Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 227/451 (50%), Gaps = 27/451 (5%)
Query: 290 ISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAE 349
I +++++ C+ + E + KG P T N +L + + A V +A+
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 350 MVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGF 409
M R + NV T+ +IN +CK G L +A F M V ++P TY TL+ GFS G
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 410 LDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
++ A +++EM GF P + TYN ++ C GR + VL M GL PD VSY+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNI 332
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
+I G S + +L+ AF + EMV++G++P TY++LIHGL + +I A L +E+ +G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
+ D TY LIN YC GD +A LHDEM+ G P TY+ LI L ++ +T EA
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA--------------------ALLKGF 629
+L K+ P V+ NTL++ I + A L++G
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512
Query: 630 CMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHT 689
C +G EA + M +R P+ Y+ +I G+SK G+ + A+ + +M+ GF P
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Query: 690 VTIIVLVKALHTAGMNEELSQVIENILRSCR 720
+T L+K L N+E ++ E +LR +
Sbjct: 573 LTYNALLKGLSK---NQE-GELAEELLREMK 599
Score = 169 bits (427), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 198/433 (45%), Gaps = 18/433 (4%)
Query: 325 VTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQ 384
+ ++ L+ C+ + +A+ M G P T ++ + + + A F+
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 385 MHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGR 444
M+ E++ N T+ +IN + G L +A L M G P+IVTYN L++G GR
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275
Query: 445 VEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSS 504
+E A ++ M KG PD+ +Y+ I+S +A + REM E G++PD+++Y+
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNI 332
Query: 505 LIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKG 564
LI G + A EM+ +GM P +TY TLI+ E I A L E+ +KG
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392
Query: 565 FLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAA 624
+ D VTY++LING + +A L ++ D P+ Y +LI
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI------------- 439
Query: 625 LLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSG 684
C K EAD +FE ++ + P+ + + ++ GH +GN+ +A+ L K+M
Sbjct: 440 --YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 685 FVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVL 744
P VT L++ L G EE +++ + R D L+ K+G+
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 745 NVLTEMAKDGLLP 757
V EM G P
Sbjct: 558 MVRDEMLSLGFNP 570
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 171/386 (44%), Gaps = 21/386 (5%)
Query: 376 NRAMEFFDQMHVRELRPNEKT---YTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTY 432
N FD++ + R K+ + L+ Q +DEA M + GF P T
Sbjct: 134 NSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETC 193
Query: 433 NALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE 492
N ++ R+E+A M R + +V +++ +I+ + +L KA M
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 493 KGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQ 552
G+ P +TY++L+ G + RI A + EM S+G PD TY +++ C EG +
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE 313
Query: 553 ALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
LR EM + G +PD V+Y++LI G + A ++ VP+ YNTLI
Sbjct: 314 VLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 613 NCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQK 672
G M+ + A+ + + ++ + + Y+I+I+G+ + G+ +K
Sbjct: 371 ---------------GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 673 AYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVE 732
A+ L+ +M+ G P T L+ L E ++ E ++ D + L++
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 733 INHKEGNMDAVLNVLTEMAKDGLLPN 758
+ GNMD ++L EM + P+
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPD 501
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/515 (32%), Positives = 276/515 (53%), Gaps = 27/515 (5%)
Query: 175 HGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGD 234
G+ P S+N+++ V + G+ VKFAE++ + M + P+V +YN LI G C GD
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQ---VKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 235 LEMGLRFFSEMEKNN---CLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLIS 291
+ + ++ C ++V++N+L +G+ K+ +D+ F + M LK PN+++
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM-LKCCSPNVVT 165
Query: 292 YNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMV 351
Y+ I+ CK G L+ + + R L P+ VT+ L++GYCK G+L A+ L+ EM
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
Query: 352 RNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLD 411
R +S NVVTYT+LI+ CK G + RA E + +M + PN YTT+I+GF Q G D
Sbjct: 226 RVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 412 EAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTII 471
A + L +M G I Y +I G C G++++A ++ M + L PD+V ++T++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 472 SGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMS 531
+ + +S + A + +++E+G PD + S++I G+ + ++ EA F + +
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKA-- 401
Query: 532 PDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKL 591
++ YT LI+A C EGD + RL ++ + G +PD Y+ I GL KQ ++A KL
Sbjct: 402 -NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKL 460
Query: 592 LLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHM 651
++ + + + Y TLI G KGLM EA +VF+ ML
Sbjct: 461 KTRMVQEGLLLDLLAYTTLI---------------YGLASKGLMVEARQVFDEMLNSGIS 505
Query: 652 PNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFV 686
P+ AV+D++I + K GN+ A DL M R G V
Sbjct: 506 PDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 293/564 (51%), Gaps = 32/564 (5%)
Query: 200 VKFAEEVYNEMGKSRVSPNVYTYN----VLIRGFCGVGDLEMGLRFFSEMEKNNCLANVV 255
V+ A + + + KS P+ +T N LI CG+ + L+F + + +
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGI----LSLKFLAYLVSRGYTPHRS 57
Query: 256 TYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEI 315
++N+++ CKLG++ A ++ M G EP++ISYN +I+G C+ G ++ +L +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 316 -SRKGLV--PDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKS 372
+ G + PD V++N+L NG+ K L + V M++ SPNVVTY++ I++ CKS
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWIDTFCKS 176
Query: 373 GNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTY 432
G L A++ F M L PN T+T LI+G+ + G L+ A L EM + ++VTY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 433 NALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE 492
ALI G C G ++ A + M + P+ + Y+TII GF + + D A +M+
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLN 296
Query: 493 KGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQ 552
+G+ D Y +I GLC ++ EA E+ ++M + PD +TT++NAY G +
Sbjct: 297 QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 553 ALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
A+ ++ ++I++GF PDVV S +I+G+ K + EA +++ +DV+Y LI+
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-----VYFCIEKANDVMYTVLID 411
Query: 613 NCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQK 672
C +G E +R+F + + +P++ +Y I G K GN+
Sbjct: 412 ---------------ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 673 AYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVE 732
A+ L +MV+ G + + L+ L + G+ E QV + +L S D+ + +L+
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 733 INHKEGNMDAVLNVLTEMAKDGLL 756
KEGNM A ++L +M + GL+
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLV 540
Score = 241 bits (615), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 248/469 (52%), Gaps = 10/469 (2%)
Query: 143 TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKF 202
+S ++V+ V K L + A +IV+ G P V+SYN+++D R+G
Sbjct: 57 SSFNSVVSFVCK----LGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
E P++ ++N L GF + L+ + M K C NVVTY+T ID
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWID 171
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+CK G + A K M + PN++++ +I+G CK G L+ + E+ R +
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+ VTY L++G+CK+G + +A +++ MV + + PN + YT++I+ + G+ + AM+F
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFL 291
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M + +R + Y +I+G +G L EA ++ +M K+ +P +V + ++ +
Sbjct: 292 AKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKS 351
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR++ AV + H + +G PDVV+ ST+I G +++ +L +A +EK + + Y
Sbjct: 352 GRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI--VYFCIEKA---NDVMY 406
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+ LI LC++ E LF ++ G+ PD+F YT+ I C +G++ A +L M+Q
Sbjct: 407 TVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI 611
+G L D++ Y+ LI GL + +EA+++ ++ P +++ LI
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 227/434 (52%), Gaps = 40/434 (9%)
Query: 170 NLAKVHGFM--PGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGK--SRVSPNVYTYNVL 225
+L HGF+ P ++S+N++ + + +K +EV+ MG SPNV TY+
Sbjct: 116 SLRASHGFICKPDIVSFNSLFNGFSK------MKMLDEVFVYMGVMLKCCSPNVVTYSTW 169
Query: 226 IRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGI 285
I FC G+L++ L+ F M+++ NVVT+ LIDGYCK G ++ A L ++M +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 286 EPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALV 345
N+++Y +I+G CK+G ++ + + + + + P+ + Y T+++G+ + G+ A+
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 346 LHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFS 405
A+M+ G+ ++ Y +I+ +C +G L A E + M +L P+ +TT++N +
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 406 QHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV---------------- 449
+ G + A + +++ + GF P +V + +I G G++ +A+
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL 409
Query: 450 --------------GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGV 495
+ ++ GL PD Y++ I+G + L AF K MV++G+
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469
Query: 496 LPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALR 555
L D + Y++LI+GL + + EA ++F EML+ G+SPD + LI AY EG++ A
Sbjct: 470 LLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASD 529
Query: 556 LHDEMIQKGFLPDV 569
L +M ++G + V
Sbjct: 530 LLLDMQRRGLVTAV 543
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 230/462 (49%), Gaps = 34/462 (7%)
Query: 305 LKETKGILNEISRKGLVPDEVTYN----TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVV 360
++E L+ + + +PD T N L+N C G L +L A +V G +P+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNC--GIL--SLKFLAYLVSRGYTPHRS 57
Query: 361 TYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEM 420
++ S+++ +CK G + A + M P+ +Y +LI+G ++G + A +L +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 421 -TKNGFM--PSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRS 477
+GF+ P IV++N+L G + ++ D V V G+ K +P+VV+YST I F +S
Sbjct: 118 RASHGFICKPDIVSFNSLFNGF-SKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 478 QELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTY 537
EL A + M + P+ +T++ LI G C+ + A L++EM MS + TY
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY 236
Query: 538 TTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFY 597
T LI+ +C +G++ +A ++ M++ P+ + Y+ +I+G ++ + A K L K+
Sbjct: 237 TALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM-- 294
Query: 598 DESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVY 657
+ ++ ++ G C G + EA + E M + + +P+ ++
Sbjct: 295 -------------LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 658 DIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILR 717
+++ + K G ++ A ++Y K++ GF P V + ++ + G Q+ E I+
Sbjct: 342 TTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG------QLHEAIVY 395
Query: 718 SC-RLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
C ++ + VL++ KEG+ V + +++++ GL+P+
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 162/365 (44%), Gaps = 87/365 (23%)
Query: 130 FSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILD 189
F+CL + Y + +++ V Y + + ++N+V +Y A++D
Sbjct: 201 FTCLIDGY------CKAGDLEVAVSLYKEMRRVRMSLNVV-------------TYTALID 241
Query: 190 SVIRSGRNNWVKFAEEVYNEMGKSRVSPN--VYT-------------------------- 221
+ G ++ AEE+Y+ M + RV PN VYT
Sbjct: 242 GFCKKGE---MQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG 298
Query: 222 -------YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAF 274
Y V+I G CG G L+ +MEK++ + ++V + T+++ Y K GR+ A
Sbjct: 299 MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 275 KLLRDMGLKGIEPNLIS------------------------------YNVIINGLCKEGR 304
+ + +G EP++++ Y V+I+ LCKEG
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGD 418
Query: 305 LKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTS 364
E + + ++IS GLVPD+ Y + + G CK+GNL A L MV+ GL +++ YT+
Sbjct: 419 FIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTT 478
Query: 365 LINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNG 424
LI + G + A + FD+M + P+ + LI + + G + A LL +M + G
Sbjct: 479 LIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Query: 425 FMPSI 429
+ ++
Sbjct: 539 LVTAV 543
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 293 bits (751), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/568 (29%), Positives = 301/568 (52%), Gaps = 25/568 (4%)
Query: 162 IDKAVNIV-NLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVY 220
+D AV++ ++ K F P ++ +N +L +V + + V E +G +S ++Y
Sbjct: 64 VDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG---ISHDLY 119
Query: 221 TYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDM 280
TY++ I FC L + L ++M K ++VT ++L++GYC RI DA L+ M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 281 GLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNL 340
G +P+ ++ +I+GL + E +++++ ++G PD VTY T++NG CK G++
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 341 HQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTL 400
AL L +M + + +VV Y ++I+ +CK +++ A+ F +M + +RP+ TY++L
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 401 INGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGL 460
I+ +G +A RLL++M + P++VT++ALI G++ +A + M ++ +
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 461 APDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACE 520
PD+ +YS++I+GF LD+A M+ K P+ +TYS+LI G C+ +R+ E E
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGME 419
Query: 521 LFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
LF+EM RG+ + TYTTLI+ + D A + +M+ G P+++TY++L++GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 581 KQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-C------------TNIEFQNVA---- 623
K + +A + L P YN +IE C N+ + V+
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 624 ---ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKM 680
++ GFC KG EAD + + M + +PN Y+ +I + G+ + + +L K+M
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 681 VRSGFVPHTVTIIVLVKALHTAGMNEEL 708
GF TI ++ LH +++
Sbjct: 600 RSCGFAGDASTIGLVTNMLHDGRLDKSF 627
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/565 (27%), Positives = 291/565 (51%), Gaps = 21/565 (3%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ +M KSR P++ +N L+ + E+ + +M+ ++ TY+ I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ A +L M G EP++++ + ++NG C R+ + +++++ G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D T+ TL++G +A+ L +MV+ G P++VTY +++N +CK G+++ A+
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M ++ + Y T+I+G ++ +D+A L EM G P + TY++LI C
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR DA +L M + + P+VV++S +I F + +L +A EM+++ + PD TY
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
SSLI+G C R+ EA +F+ M+S+ P+ TY+TLI +C + + + L EM Q
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESV-PSDVIYNTLIENCTNIEFQN 621
+G + + VTY+ LI+G QAR + +++ K V P+ + YN L++
Sbjct: 427 RGLVGNTVTYTTLIHGFF-QARDCDNAQMVFKQMVSVGVHPNILTYNILLD--------- 476
Query: 622 VAALLKGFCMKGLMNEADRVFELMLQRNHM-PNEAVYDIIIHGHSKVGNVQKAYDLYKKM 680
G C G + +A VFE LQR+ M P+ Y+I+I G K G V+ ++L+ +
Sbjct: 477 ------GLCKNGKLAKAMVVFEY-LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 681 VRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNM 740
G P+ + ++ G EE +++ + L ++ L+ ++G+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDR 589
Query: 741 DAVLNVLTEMAKDGLLPNSGRSTYG 765
+A ++ EM G ++ ST G
Sbjct: 590 EASAELIKEMRSCGFAGDA--STIG 612
Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 152/490 (31%), Positives = 253/490 (51%), Gaps = 15/490 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L DM P+++ +N +++ + K + + + ++ G+ D TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
+N +C+ L AL + A+M++ G P++VT +SL+N C S ++ A+ DQM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+P+ T+TTLI+G H EA L+++M + G P +VTY ++ G C G ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L M + + DVV Y+TII G + + +D A + EM KG+ PD TYSSLI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC R ++A L +M+ R ++P+ T++ LI+A+ EG + +A +L+DEMI++ PD
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+ TYS LING R EAK + + + P+ V Y+TLI KG
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI---------------KG 407
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
FC + E +F M QR + N Y +IHG + + A ++K+MV G P+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
+T +L+ L G + V E + RS D +++E K G ++ +
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 749 EMAKDGLLPN 758
++ G+ PN
Sbjct: 528 NLSLKGVSPN 537
Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 196/438 (44%), Gaps = 34/438 (7%)
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
+ L +H + G P V ++ +L S C + A + RE+ L
Sbjct: 10 KRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDY-----REI---------LR 55
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
N S +D+A L +M K+ PSIV +N L+ + E + + M G++
Sbjct: 56 NRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGIS 115
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
D+ +YS I+ F R +L A +M++ G PD +T SSL++G C +RI++A L
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNK 581
+M+ G PD FT+TTLI+ +A+ L D+M+Q+G PD+VTY ++NGL K
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK 235
Query: 582 QARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA------------------ 623
+ A LL K+ + VIYNT+I+ + + A
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 624 --ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
+L+ C G ++A R+ M++R PN + +I K G + +A LY +M+
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 682 RSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMD 741
+ P T L+ +E + E ++ + L++ K ++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 742 AVLNVLTEMAKDGLLPNS 759
+ + EM++ GL+ N+
Sbjct: 416 EGMELFREMSQRGLVGNT 433
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 292 bits (748), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 306/599 (51%), Gaps = 27/599 (4%)
Query: 165 AVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNV 224
A+++ + G P + N +L S++R+ N + E ++ + K VSP+VY +
Sbjct: 223 ALDVFPVLANKGMFPSKTTCNILLTSLVRA---NEFQKCCEAFDVVCKG-VSPDVYLFTT 278
Query: 225 LIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKG 284
I FC G +E ++ FS+ME+ NVVT+NT+IDG GR D+AF M +G
Sbjct: 279 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 338
Query: 285 IEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQAL 344
+EP LI+Y++++ GL + R+ + +L E+++KG P+ + YN L++ + + G+L++A+
Sbjct: 339 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 398
Query: 345 VLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGF 404
+ MV GLS TY +LI CK+G + A +M N+ ++T++I
Sbjct: 399 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 458
Query: 405 SQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDV 464
H D A R + EM P LI G C G+ A+ + KG D
Sbjct: 459 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 518
Query: 465 VSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQE 524
+ + ++ G + +LD+AF ++E++ +G + D ++Y++LI G C ++++ EA E
Sbjct: 519 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 578
Query: 525 MLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQAR 584
M+ RG+ PD +TY+ LI + +A++ D+ + G LPDV TYSV+I+G K R
Sbjct: 579 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 638
Query: 585 TMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFEL 644
T E ++ F+DE + +V NT++ N L++ +C G ++ A + E
Sbjct: 639 TEEGQE-----FFDEMMSKNVQPNTVVYN----------HLIRAYCRSGRLSMALELRED 683
Query: 645 MLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGM 704
M + PN A Y +I G S + V++A L+++M G P+ L+ G
Sbjct: 684 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ 743
Query: 705 NEELSQVIENILRSCRLSDAELAK----VLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
+ +E +LR + K V++ ++GN+ +L EM + G++P+S
Sbjct: 744 MVK----VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 798
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 239/489 (48%), Gaps = 13/489 (2%)
Query: 151 LVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEM 210
++VK + I A ++ GF P V+ YN ++DS I +G N A E+ + M
Sbjct: 348 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK---AIEIKDLM 404
Query: 211 GKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRI 270
+S TYN LI+G+C G + R EM N ++ ++I C
Sbjct: 405 VSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMF 464
Query: 271 DDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTL 330
D A + + +M L+ + P +I+GLCK G+ + + + KG V D T N L
Sbjct: 465 DSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNAL 524
Query: 331 LNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVREL 390
L+G C+ G L +A + E++ G + V+Y +LI+ C L+ A F D+M R L
Sbjct: 525 LHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGL 584
Query: 391 RPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVG 450
+P+ TY+ LI G ++EA + ++ +NG +P + TY+ +I G C R E+
Sbjct: 585 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 644
Query: 451 VLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLC 510
M K + P+ V Y+ +I + RS L A + + +M KG+ P++ TY+SLI G+
Sbjct: 645 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 704
Query: 511 EQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVV 570
R+ EA LF+EM G+ P+ F YT LI+ Y G + + L EM K P+ +
Sbjct: 705 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 764
Query: 571 TYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI----------ENCTNIEFQ 620
TY+V+I G + EA +LL ++ VP + Y I E + +
Sbjct: 765 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEE 824
Query: 621 NVAALLKGF 629
N AA+++G+
Sbjct: 825 NYAAIIEGW 833
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 245/512 (47%), Gaps = 25/512 (4%)
Query: 258 NTLIDGYCKLGRID------DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGI 311
+ LI+ YC + D D F +L + KG+ P+ + N+++ L + ++
Sbjct: 205 DLLIEVYCTQFKRDGCYLALDVFPVLAN---KGMFPSKTTCNILLTSLVRANEFQKCCEA 261
Query: 312 LNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 371
+ + KG+ PD + T +N +CK G + +A+ L ++M G++PNVVT+ ++I+ +
Sbjct: 262 FDVVC-KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGM 320
Query: 372 SGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVT 431
G + A F ++M R + P TY+ L+ G ++ + +AY +L EMTK GF P+++
Sbjct: 321 CGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIV 380
Query: 432 YNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMV 491
YN LI G + A+ + M KGL+ +Y+T+I G+ ++ + D A +EM+
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 440
Query: 492 EKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIP 551
G + +++S+I LC A EML R MSP TTLI+ C G
Sbjct: 441 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHS 500
Query: 552 QALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI 611
+AL L + + KGF+ D T + L++GL + + EA ++ ++ V V YNTLI
Sbjct: 501 KALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 560
Query: 612 ENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQ 671
C C K ++EA + M++R P+ Y I+I G + V+
Sbjct: 561 SGC---------------CGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE 605
Query: 672 KAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLV 731
+A + R+G +P T V++ A EE + + ++ + + L+
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 732 EINHKEGNMDAVLNVLTEMAKDGLLPNSGRST 763
+ G + L + +M G+ PNS T
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 143 TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKF 202
+ +SA ++K S ++ +++A + ++ G P V Y A++D + G+ VK
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQ--MVK- 746
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
E + EM V PN TY V+I G+ G++ R +EM + + + +TY I
Sbjct: 747 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIY 806
Query: 263 GYCKLGRIDDAFK 275
GY K G + +AFK
Sbjct: 807 GYLKQGGVLEAFK 819
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 289 bits (740), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 297/565 (52%), Gaps = 21/565 (3%)
Query: 178 MPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEM 237
+P + +N +L ++ + + + V E +G +S N+YTYN+LI FC + +
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG---ISHNLYTYNILINCFCRRSQISL 63
Query: 238 GLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIIN 297
L +M K ++VT ++L++GYC RI DA L+ M G P+ I++ +I+
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 298 GLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSP 357
GL + E +++ + ++G P+ VTY ++NG CK G++ A L +M +
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 358 NVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLL 417
+VV + ++I+S+CK +++ A+ F +M + +RPN TY++LI+ +G +A +LL
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 418 NEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRS 477
++M + P++VT+NALI G+ +A + M ++ + PD+ +Y+++I+GF
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 478 QELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTY 537
LDKA MV K PD TY++LI G C+ +R+ + ELF+EM RG+ D TY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 538 TTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFY 597
TTLI +GD A ++ +M+ G PD++TYS+L++GL + +A ++ +
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 598 DESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVY 657
E IY T+IE G C G +++ +F + + PN Y
Sbjct: 424 SEIKLDIYIYTTMIE---------------GMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 658 DIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILR 717
+ +I G +Q+AY L KKM G +P + T L++A G +++I +R
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE-MR 527
Query: 718 SCR-LSDAELAKVLVEINHKEGNMD 741
SCR + DA ++ + H +G +D
Sbjct: 528 SCRFVGDASTIGLVANMLH-DGRLD 551
Score = 266 bits (680), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 276/541 (51%), Gaps = 15/541 (2%)
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M KSR P+++ +N L+ + ++ + +M++ N+ TYN LI+ +C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
I A LL M G EP++++ + ++NG C R+ + +++++ G PD +T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++G +A+ L MV+ G PN+VTY ++N +CK G+++ A ++M +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
+ + + T+I+ ++ +D+A L EM G P++VTY++LI C+ GR DA
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
+L M K + P++V+++ +I F + + +A +M+++ + PD TY+SLI+G
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
C R+ +A ++F+ M+S+ PD TY TLI +C + L EM +G + D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGF 629
VTY+ LI GL A+K+ ++ D VP D++ ++ LL G
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSI--------------LLDGL 405
Query: 630 CMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHT 689
C G + +A VF+ M + + +Y +I G K G V +DL+ + G P+
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 690 VTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTE 749
VT ++ L + + +E +++ + L D+ L+ + ++G+ A ++ E
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 525
Query: 750 M 750
M
Sbjct: 526 M 526
Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 237/463 (51%), Gaps = 3/463 (0%)
Query: 150 DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
++++ + + I A+ ++ G+ P +++ +++L+ R + A + ++
Sbjct: 49 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR---ISDAVALVDQ 105
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M + P+ T+ LI G + M + C N+VTY +++G CK G
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 165
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
ID AF LL M IE +++ +N II+ LCK + + + E+ KG+ P+ VTY++
Sbjct: 166 IDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 225
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++ C G A L ++M+ ++PN+VT+ +LI++ K G A + D M R
Sbjct: 226 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
+ P+ TY +LINGF H LD+A ++ M P + TYN LIKG C RVED
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
+ M+ +GL D V+Y+T+I G + D A ++MV GV PD +TYS L+ GL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
C ++ +A E+F M + D + YTT+I C G + L + KG P+V
Sbjct: 406 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 465
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
VTY+ +I+GL + EA LL K+ D +P YNTLI
Sbjct: 466 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIR 508
Score = 242 bits (618), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 241/472 (51%), Gaps = 15/472 (3%)
Query: 287 PNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVL 346
P++ +N +++ + K + + ++ R G+ + TYN L+N +C+ + AL L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 347 HAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQ 406
+M++ G P++VT +SL+N C ++ A+ DQM RP+ T+TTLI+G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 407 HGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVS 466
H EA L++ M + G P++VTY ++ G C G ++ A +L+ M + DVV
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 467 YSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEML 526
++TII + + +D A + +EM KG+ P+ +TYSSLI LC R ++A +L +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 527 SRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTM 586
+ ++P+ T+ LI+A+ EG +A +LHD+MI++ PD+ TY+ LING R
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 587 EAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELML 646
+AK++ + + P YNTLI KGFC + + +F M
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLI---------------KGFCKSKRVEDGTELFREMS 352
Query: 647 QRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNE 706
R + + Y +I G G+ A ++K+MV G P +T +L+ L G E
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 707 ELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ +V + + +S D + ++E K G +D ++ ++ G+ PN
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 205/380 (53%), Gaps = 7/380 (1%)
Query: 148 VIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVY 207
+ + ++ S +D A+N+ + G P V++Y++++ + GR W A ++
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR--WSD-ASQLL 243
Query: 208 NEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKL 267
++M + +++PN+ T+N LI F G + +M K + ++ TYN+LI+G+C
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 268 GRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTY 327
R+D A ++ M K P+L +YN +I G CK R+++ + E+S +GLV D VTY
Sbjct: 304 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 363
Query: 328 NTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHV 387
TL+ G +G+ A + +MV +G+ P+++TY+ L++ +C +G L +A+E FD M
Sbjct: 364 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 423
Query: 388 RELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVED 447
E++ + YTT+I G + G +D+ + L ++ G P++VTYN +I G C+ +++
Sbjct: 424 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 483
Query: 448 AVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIH 507
A +L M G PD +Y+T+I R + + + REM + D T L+
Sbjct: 484 AYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVA 542
Query: 508 GLCEQRRITEACELFQEMLS 527
+ R+ ++ F +MLS
Sbjct: 543 NMLHDGRLDKS---FLDMLS 559
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 218/432 (50%), Gaps = 15/432 (3%)
Query: 321 VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAME 380
+P +N LL+ K + L +M R G+S N+ TY LIN C+ ++ A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
+M P+ T ++L+NG+ + +A L+++M + G+ P +T+ LI G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
+ +AV ++ M ++G P++V+Y +++G + ++D AF+ +M + D +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 501 TYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEM 560
++++I LC+ R + +A LF+EM ++G+ P+ TY++LI+ C+ G A +L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 561 IQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQ 620
I+K P++VT++ LI+ K+ + +EA+KL + P YN+LI
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI--------- 297
Query: 621 NVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKM 680
GFCM +++A ++FE M+ ++ P+ Y+ +I G K V+ +L+++M
Sbjct: 298 ------NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Query: 681 VRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNM 740
G V TVT L++ L G + +V + ++ D +L++ G +
Sbjct: 352 SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL 411
Query: 741 DAVLNVLTEMAK 752
+ L V M K
Sbjct: 412 EKALEVFDYMQK 423
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 286 bits (732), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 297/565 (52%), Gaps = 22/565 (3%)
Query: 162 IDKAVNIV-NLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVY 220
+D AV++ ++ K F P ++ +N +L +V + + V E +G +S ++Y
Sbjct: 64 VDDAVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG---ISHDLY 119
Query: 221 TYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDM 280
TY++ I FC L + L ++M K ++VT ++L++GYC RI DA L+ M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 281 GLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNL 340
G +P+ ++ +I+GL + E +++++ ++G PD VTY T++NG CK G++
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 341 HQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTL 400
AL L +M + NVV + ++I+S+CK ++ A++ F +M + +RPN TY +L
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 401 INGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGL 460
IN +G +A RLL+ M + P++VT+NALI G++ +A + M ++ +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 461 APDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACE 520
PD ++Y+ +I+GF LD+A + MV K LP+ TY++LI+G C+ +R+ + E
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 521 LFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
LF+EM RG+ + TYTT+I + GD A + +M+ D++TYS+L++GL
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 581 KQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN--------------CT---NIEFQNVA 623
+ A + L E + IYNT+IE C+ +
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYN 539
Query: 624 ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRS 683
++ G C K L+ EAD +F M + +PN Y+ +I + + + + +L K+M S
Sbjct: 540 TMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS 599
Query: 684 GFVPHTVTIIVLVKALHTAGMNEEL 708
GFV TI ++ LH +++
Sbjct: 600 GFVGDASTISLVTNMLHDGRLDKSF 624
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/559 (27%), Positives = 283/559 (50%), Gaps = 55/559 (9%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ +M KSR P++ +N L+ + E+ + +M+ ++ TY+ I+
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ ++ A +L M G EP++++ + ++NG C R+ + +++++ G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D T+ TL++G +A+ L +MV+ G P++VTY +++N +CK G+++ A+
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
++M ++ N + T+I+ ++ ++ A L EM G P++VTYN+LI C
Sbjct: 247 NKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR DA +L M K + P+VV+++ +I F + +L +A EM+++ + PDTITY
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+ LI+G C R+ EA ++F+ M+S+ P+ TY TLIN +C + + L EM Q
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+G + + VTY+ +I G QA ++ +++ K VP+D++ ++
Sbjct: 427 RGLVGNTVTYTTIIQGF-FQAGDCDSAQMVFKQMVSNRVPTDIMTYSI------------ 473
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMP-NEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
LL G C G ++ A +F+ LQ++ M N +Y+ +I G K G V +A+DL+ +
Sbjct: 474 --LLHGLCSYGKLDTALVIFKY-LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL- 529
Query: 682 RSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMD 741
P VT ++ L + + L Q +++ R
Sbjct: 530 --SIKPDVVTYNTMISGLCS----KRLLQEADDLFR------------------------ 559
Query: 742 AVLNVLTEMAKDGLLPNSG 760
+M +DG LPNSG
Sbjct: 560 -------KMKEDGTLPNSG 571
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 180/370 (48%), Gaps = 20/370 (5%)
Query: 410 LDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
+D+A L +M K+ PSIV +N L+ + E + + M G++ D+ +YS
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
I+ F R +L A +M++ G PD +T SSL++G C +RI++A L +M+ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
PD FT+TTLI+ +A+ L D+M+Q+G PD+VTY ++NGL K+ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA--------------------ALLKGF 629
LL K+ + VI+NT+I++ VA +L+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 630 CMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHT 689
C G ++A R+ ML++ PN ++ +I K G + +A L+++M++ P T
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 690 VTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTE 749
+T +L+ +E Q+ + ++ L + + L+ K ++ + + E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 750 MAKDGLLPNS 759
M++ GL+ N+
Sbjct: 424 MSQRGLVGNT 433
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 286 bits (732), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 168/565 (29%), Positives = 299/565 (52%), Gaps = 21/565 (3%)
Query: 178 MPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEM 237
+P ++ +N +L ++ + + + V E +M + + +YTYN+LI FC + +
Sbjct: 82 LPSIVEFNKLLSAIAKMKKFDVVISLGE---KMQRLEIVHGLYTYNILINCFCRRSQISL 138
Query: 238 GLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIIN 297
L +M K ++VT ++L++GYC RI DA L+ M G P+ I++ +I+
Sbjct: 139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 298 GLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSP 357
GL + E +++ + ++G P+ VTY ++NG CK G+ AL L +M +
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA 258
Query: 358 NVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLL 417
+VV + ++I+S+CK +++ A+ F +M + +RPN TY++LI+ +G +A +LL
Sbjct: 259 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 318
Query: 418 NEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRS 477
++M + P++VT+NALI G+ +A + M ++ + PD+ +Y+++++GF
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 478 QELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTY 537
LDKA MV K PD +TY++LI G C+ +R+ + ELF+EM RG+ D TY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 538 TTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFY 597
TTLI +GD A ++ +M+ G PD++TYS+L++GL + +A ++ +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 598 DESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVY 657
E IY T+IE G C G +++ +F + + PN Y
Sbjct: 499 SEIKLDIYIYTTMIE---------------GMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 658 DIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILR 717
+ +I G +Q+AY L KKM G +P++ T L++A G +++I +R
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE-MR 602
Query: 718 SCR-LSDAELAKVLVEINHKEGNMD 741
SCR + DA ++ + H +G +D
Sbjct: 603 SCRFVGDASTIGLVANMLH-DGRLD 626
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 145/463 (31%), Positives = 238/463 (51%), Gaps = 3/463 (0%)
Query: 150 DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
++++ + + I A+ ++ G+ P +++ +++L+ R + A + ++
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR---ISDAVALVDQ 180
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M + P+ T+ LI G + M + C N+VTY +++G CK G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
D A LL M IE +++ +N II+ LCK + + + E+ KG+ P+ VTY++
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++ C G A L ++M+ ++PN+VT+ +LI++ K G A + +D M R
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
+ P+ TY +L+NGF H LD+A ++ M P +VTYN LIKG C RVED
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
+ M+ +GL D V+Y+T+I G + D A ++MV GV PD +TYS L+ GL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 480
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
C ++ +A E+F M + D + YTT+I C G + L + KG P+V
Sbjct: 481 CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNV 540
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
VTY+ +I+GL + EA LL K+ D +P+ YNTLI
Sbjct: 541 VTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 249/490 (50%), Gaps = 15/490 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L M P+++ +N +++ + K + + ++ R +V TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
L+N +C+ + AL L +M++ G P++VT +SL+N C ++ A+ DQM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
RP+ T+TTLI+G H EA L++ M + G P++VTY ++ G C G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L+ M + DVV ++TII + + +D A + +EM KG+ P+ +TYSSLI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC R ++A +L +M+ + ++P+ T+ LI+A+ EG +A +L+D+MI++ PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+ TY+ L+NG R +AK++ + + P V YNTLI KG
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI---------------KG 409
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
FC + + +F M R + + Y +I G G+ A ++K+MV G P
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
+T +L+ L G E+ +V + + +S D + ++E K G +D ++
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 749 EMAKDGLLPN 758
++ G+ PN
Sbjct: 530 SLSLKGVKPN 539
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/536 (27%), Positives = 263/536 (49%), Gaps = 20/536 (3%)
Query: 235 LEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNV 294
L+ + F M K+ L ++V +N L+ K+ + D L M I L +YN+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 295 IINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
+IN C+ ++ +L ++ + G P VT ++LLNGYC + A+ L +MV G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 355 LSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAY 414
P+ +T+T+LI+ + + A+ D+M R +PN TY ++NG + G D A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 415 RLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGF 474
LLN+M +V +N +I C V+DA+ + M KG+ P+VV+YS++IS
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 475 SRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDE 534
A +M+EK + P+ +T+++LI ++ + EA +L+ +M+ R + PD
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 535 FTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLK 594
FTY +L+N +C + +A ++ + M+ K PDVVTY+ LI G K R + +L +
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFRE 425
Query: 595 LFYDESVPSDVIYNTLIE------NCTNIE--FQNVAA------------LLKGFCMKGL 634
+ + V V Y TLI+ +C N + F+ + + LL G C G
Sbjct: 426 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 635 MNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIV 694
+ +A VF+ M + + +Y +I G K G V +DL+ + G P+ VT
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 545
Query: 695 LVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEM 750
++ L + + +E +++ + L ++ L+ + ++G+ A ++ EM
Sbjct: 546 MISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 207/380 (54%), Gaps = 7/380 (1%)
Query: 148 VIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVY 207
+ + ++ S +D A+N+ + G P V++Y++++ + GR W A ++
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR--WSD-ASQLL 318
Query: 208 NEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKL 267
++M + +++PN+ T+N LI F G + + +M K + ++ TYN+L++G+C
Sbjct: 319 SDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 268 GRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTY 327
R+D A ++ M K P++++YN +I G CK R+++ + E+S +GLV D VTY
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 328 NTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHV 387
TL+ G +G+ A + +MV +G+ P+++TY+ L++ +C +G L +A+E FD M
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 388 RELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVED 447
E++ + YTT+I G + G +D+ + L ++ G P++VTYN +I G C+ +++
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 448 AVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIH 507
A +L M G P+ +Y+T+I R + + + REM + D T L+
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI-GLVA 617
Query: 508 GLCEQRRITEACELFQEMLS 527
+ R+ ++ F +MLS
Sbjct: 618 NMLHDGRLDKS---FLDMLS 634
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 238/496 (47%), Gaps = 37/496 (7%)
Query: 278 RDMGLKGIEPNLISYNVIINGLCKEGR-LKETKGILNEISRKGL---------------- 320
R++ KG P + ++ + G+C GR G EI R GL
Sbjct: 19 RNLQGKG-NPRIAPSSIDLCGMCYWGRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMV 77
Query: 321 ----VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLN 376
+P V +N LL+ K + L +M R + + TY LIN C+ ++
Sbjct: 78 KSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS 137
Query: 377 RAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALI 436
A+ +M P+ T ++L+NG+ + +A L+++M + G+ P +T+ LI
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 437 KGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVL 496
G + +AV ++ M ++G P++V+Y +++G + + D A + +M +
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 497 PDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRL 556
D + ++++I LC+ R + +A LF+EM ++G+ P+ TY++LI+ C+ G A +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 557 HDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTN 616
+MI+K P++VT++ LI+ K+ + +EA+KL Y+ +I+ +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL---------------YDDMIKRSID 362
Query: 617 IEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDL 676
+ +L+ GFCM +++A ++FE M+ ++ P+ Y+ +I G K V+ +L
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 677 YKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHK 736
+++M G V TVT L++ L G + +V + ++ D +L++
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 482
Query: 737 EGNMDAVLNVLTEMAK 752
G ++ L V M K
Sbjct: 483 NGKLEKALEVFDYMQK 498
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 286 bits (731), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 200/747 (26%), Positives = 380/747 (50%), Gaps = 37/747 (4%)
Query: 40 LTLLKRHPYQLNSLSSEFTPEAAFNLLLKTQSDQTLTLKFLKWAQPQPFFTPKLK--CLT 97
L +L R+ L+ LS +F+ E ++L + + + L+ A Q F P K C
Sbjct: 52 LLVLGRYE-ALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKM 110
Query: 98 LHILTKFKLYKSAQT-LAQNLAVDLPRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSY 156
+HIL++ + Y+ ++ L + +A++ G V+ L + + + S V D+++K Y
Sbjct: 111 VHILSRARNYQQTKSYLCELVALN---HSGFVVWGELVRVFK--EFSFSPTVFDMILKVY 165
Query: 157 SHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVS 216
+ ++ A+++ + +G +P +LS N++L +++R G N A VY++M VS
Sbjct: 166 AEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENF---VALHVYDQMISFEVS 222
Query: 217 PNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLA-NVVTYNTLIDGYCKLGRIDDAFK 275
P+V+T ++++ +C G+++ + F E E + L NVVTYN+LI+GY +G ++ +
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTR 282
Query: 276 LLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYC 335
+LR M +G+ N+++Y +I G CK+G ++E + + + K LV D+ Y L++GYC
Sbjct: 283 VLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYC 342
Query: 336 KEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEK 395
+ G + A+ +H M+ G+ N SLIN CKSG L A + F +M+ L+P+
Sbjct: 343 RTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHH 402
Query: 396 TYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGM 455
TY TL++G+ + G++DEA +L ++M + +P+++TYN L+KG+ G D + + M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 456 ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRI 515
++G+ D +S ST++ + + ++A ++ +G+L DTIT + +I GLC+ ++
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 516 TEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVL 575
EA E+ + P TY L + Y G++ +A + + M +KG P + Y+ L
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 576 INGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA-ALLKGFCMKGL 634
I+G K + L+++L P+ Y LI NI + A A KG+
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 635 ---MNEADRVFELMLQRNHMPNEAV-------YDIIIHGHSKVG-----------NVQK- 672
+N ++ + + + + + +D+++ G+ + QK
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 702
Query: 673 AYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCR-LSDAELAKVLV 731
A + + VP+ + V + L AG E+ ++ ++L S R + D +L+
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 732 EINHKEGNMDAVLNVLTEMAKDGLLPN 758
G+++ + EMA G++PN
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPN 789
Score = 228 bits (581), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/584 (27%), Positives = 274/584 (46%), Gaps = 87/584 (14%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++K Y ++++A ++ L K + Y ++D R+G+ ++ A V++ M
Sbjct: 302 LIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQ---IRDAVRVHDNMI 358
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ V N N LI G+C G L + FS M + + TYNTL+DGYC+ G +D
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A KL M K + P +++YN+++ G + G + + + ++G+ DE++ +TLL
Sbjct: 419 EALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL 478
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
K G+ ++A+ L ++ GL + +T +I+ +CK +N A E D +++ +
Sbjct: 479 EALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCK 538
Query: 392 PNEKTYTTLINGFSQHGFLDEA----------------------------YRLLN----- 418
P +TY L +G+ + G L EA YR LN
Sbjct: 539 PAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 419 --EMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSR 476
E+ G P++ TY ALI G C G ++ A M KG+ +V S I + R
Sbjct: 599 VIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFR 658
Query: 477 SQELDKA----------------FDTKREMVE----------------------KGVLPD 498
++D+A + + +E +E K ++P+
Sbjct: 659 LDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPN 718
Query: 499 TITYSSLIHGLCEQRRITEACELFQEMLSRG-MSPDEFTYTTLINAYCTEGDIPQALRLH 557
I Y+ I GLC+ ++ +A +LF ++LS PDE+TYT LI+ GDI +A L
Sbjct: 719 NIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLR 778
Query: 558 DEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNI 617
DEM KG +P++VTY+ LI GL K A++LL KL P+ + YNTLI+ +
Sbjct: 779 DEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL--V 836
Query: 618 EFQNVAALLK---GFCMKGLMNEADRVFELMLQRNHMPNEAVYD 658
+ NVA ++ KGL+ +D+ ++ +P E V D
Sbjct: 837 KSGNVAEAMRLKEKMIEKGLVRGSDKQGDV-----DIPKEVVLD 875
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 243/524 (46%), Gaps = 87/524 (16%)
Query: 144 SSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFA 203
+++ + + ++ Y + +A I + P +YN ++D R+G +V A
Sbjct: 364 TNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAG---YVDEA 420
Query: 204 EEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDG 263
++ ++M + V P V TYN+L++G+ +G L + M K A+ ++ +TL++
Sbjct: 421 LKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEA 480
Query: 264 YCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEIS------- 316
KLG ++A KL ++ +G+ + I+ NV+I+GLCK ++ E K IL+ ++
Sbjct: 481 LFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPA 540
Query: 317 ----------------------------RKGLVPDEVTYNTLLNGYCKEGNLHQALVLHA 348
RKG+ P YNTL++G K +L++ L
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 349 EMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHG 408
E+ GL+P V TY +LI C G +++A +M + + N + + N +
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 409 FLDEAYRLL--------------------------------------NEMTKNGFMPSIV 430
+DEA LL N K +P+ +
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 431 TYNALIKGHCTGGRVEDAVGVLHGM-ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
YN I G C G++EDA + + + PD +Y+ +I G + + +++KAF + E
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
M KG++P+ +TY++LI GLC+ + A L ++ +G++P+ TY TLI+ G+
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLL 593
+ +A+RL ++MI+KG L+ G +KQ K+++L
Sbjct: 841 VAEAMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVVL 874
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 286 bits (731), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 285/551 (51%), Gaps = 20/551 (3%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ EM +SR P + ++ L ++ L +ME N+ T + +I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
C+ ++ AF + + G EP+ ++++ +INGLC EGR+ E +++ + G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+T N L+NG C G + A++L MV G PN VTY ++ MCKSG AME
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M R+++ + Y+ +I+G + G LD A+ L NEM GF I+ Y LI+G C
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR +D +L M ++ + PDVV++S +I F + +L +A + +EM+++G+ PDT+TY
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTY 355
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+SLI G C++ ++ +A + M+S+G P+ T+ LIN YC I L L +M
Sbjct: 356 TSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL 415
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-CTNIE--- 618
+G + D VTY+ LI G + + AK+L ++ P V Y L++ C N E
Sbjct: 416 RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Query: 619 ----FQNVAA------------LLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIH 662
F+ + ++ G C +++A +F + + P+ Y+I+I
Sbjct: 476 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIG 535
Query: 663 GHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLS 722
G K G++ +A L++KM G P+ T +L++A G + +++IE I R
Sbjct: 536 GLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSV 595
Query: 723 DAELAKVLVEI 733
DA K++V++
Sbjct: 596 DASTVKMVVDM 606
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 236/419 (56%), Gaps = 3/419 (0%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+ AV +++ GF P ++Y +L + +SG+ A E+ +M + ++ +
Sbjct: 193 VSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQT---ALAMELLRKMEERKIKLDAVK 249
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
Y+++I G C G L+ F+EME A+++ Y TLI G+C GR DD KLLRDM
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
+ I P++++++ +I+ KEG+L+E + + E+ ++G+ PD VTY +L++G+CKE L
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
+A + MV G PN+ T+ LIN CK+ ++ +E F +M +R + + TY TLI
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
GF + G L+ A L EM P IV+Y L+ G C G E A+ + + + +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
D+ Y+ II G + ++D A+D + KGV PD TY+ +I GLC++ ++EA L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
F++M G SP+ TY LI A+ EGD ++ +L +E+ + GF D T ++++ L+
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 235/431 (54%), Gaps = 3/431 (0%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+ +A+ +V+ G P +++ NA+++ + +G+ V A + + M ++ PN T
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGK---VSDAVLLIDRMVETGFQPNEVT 214
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
Y +++ C G + + +ME+ + V Y+ +IDG CK G +D+AF L +M
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
+KG + ++I Y +I G C GR + +L ++ ++ + PD V ++ L++ + KEG L
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLR 334
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
+A LH EM++ G+SP+ VTYTSLI+ CK L++A D M + PN +T+ LI
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILI 394
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
NG+ + +D+ L +M+ G + VTYN LI+G C G++E A + M + +
Sbjct: 395 NGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVR 454
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
PD+VSY ++ G + E +KA + ++ + + D Y+ +IHG+C ++ +A +L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNK 581
F + +G+ PD TY +I C +G + +A L +M + G P+ TY++LI
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Query: 582 QARTMEAKKLL 592
+ ++ KL+
Sbjct: 575 EGDATKSAKLI 585
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 229/436 (52%), Gaps = 3/436 (0%)
Query: 176 GFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
G+ P ++++ +++ + GR V A E+ + M + P + T N L+ G C G +
Sbjct: 137 GYEPDTVTFSTLINGLCLEGR---VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 236 EMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVI 295
+ M + N VTY ++ CK G+ A +LLR M + I+ + + Y++I
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 296 INGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGL 355
I+GLCK+G L + NE+ KG D + Y TL+ G+C G L +M++ +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 356 SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYR 415
+P+VV +++LI+ K G L A E +M R + P+ TYT+LI+GF + LD+A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 416 LLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFS 475
+L+ M G P+I T+N LI G+C ++D + + M+ +G+ D V+Y+T+I GF
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 476 RSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEF 535
+L+ A + +EMV + V PD ++Y L+ GLC+ +A E+F+++ M D
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG 493
Query: 536 TYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKL 595
Y +I+ C + A L + KG PDV TY+++I GL K+ EA L K+
Sbjct: 494 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM 553
Query: 596 FYDESVPSDVIYNTLI 611
D P+ YN LI
Sbjct: 554 EEDGHSPNGCTYNILI 569
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 239/488 (48%), Gaps = 15/488 (3%)
Query: 271 DDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTL 330
DDA L ++M P LI ++ + + + + + + ++ KG+ + T + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 331 LNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVREL 390
+N C+ L A ++++ G P+ VT+++LIN +C G ++ A+E D+M
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 391 RPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVG 450
+P T L+NG +G + +A L++ M + GF P+ VTY ++K C G+ A+
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 451 VLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLC 510
+L M + + D V YS II G + LD AF+ EM KG D I Y++LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 511 EQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVV 570
R + +L ++M+ R ++PD ++ LI+ + EG + +A LH EMIQ+G PD V
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 571 TYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFC 630
TY+ LI+G K+ + +A +L + P+ +N LI G+C
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN---------------GYC 398
Query: 631 MKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTV 690
L+++ +F M R + + Y+ +I G ++G ++ A +L+++MV P V
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 691 TIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEM 750
+ +L+ L G E+ ++ E I +S D + +++ +D ++ +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 751 AKDGLLPN 758
G+ P+
Sbjct: 519 PLKGVKPD 526
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 188/373 (50%), Gaps = 7/373 (1%)
Query: 141 DSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWV 200
D+ S +ID + K S +D A N+ N ++ GF ++ Y ++ +GR W
Sbjct: 246 DAVKYSIIIDGLCKDGS----LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR--WD 299
Query: 201 KFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTL 260
A+ + +M K +++P+V ++ LI F G L EM + + VTY +L
Sbjct: 300 DGAK-LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 261 IDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGL 320
IDG+CK ++D A +L M KG PN+ ++N++ING CK + + + ++S +G+
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 321 VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAME 380
V D VTYNTL+ G+C+ G L A L EMV + P++V+Y L++ +C +G +A+E
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
F+++ ++ + Y +I+G +D+A+ L + G P + TYN +I G C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
G + +A + M G +P+ +Y+ +I + K+ E+ G D
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598
Query: 501 TYSSLIHGLCEQR 513
T ++ L + R
Sbjct: 599 TVKMVVDMLSDGR 611
Score = 159 bits (403), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/450 (23%), Positives = 209/450 (46%), Gaps = 22/450 (4%)
Query: 324 EVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFD 383
+V+Y L + A+ L EM R+ P ++ ++ L + + ++ + ++
Sbjct: 37 KVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCK 96
Query: 384 QMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGG 443
QM ++ + N T + +IN + L A+ + ++ K G+ P VT++ LI G C G
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEG 156
Query: 444 RVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYS 503
RV +A+ ++ M G P +++ + +++G + ++ A MVE G P+ +TY
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 504 SLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQK 563
++ +C+ + A EL ++M R + D Y+ +I+ C +G + A L +EM K
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 564 GFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQ--- 620
GF D++ Y+ LI G R + KLL + + P V ++ LI +C E +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI-DCFVKEGKLRE 335
Query: 621 ------------------NVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIH 662
+L+ GFC + +++A+ + +LM+ + PN ++I+I+
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 663 GHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLS 722
G+ K + +L++KM G V TVT L++ G E ++ + ++
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 723 DAELAKVLVEINHKEGNMDAVLNVLTEMAK 752
D K+L++ G + L + ++ K
Sbjct: 456 DIVSYKILLDGLCDNGEPEKALEIFEKIEK 485
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 155/330 (46%), Gaps = 15/330 (4%)
Query: 430 VTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
V+Y ++ + +DAV + M R P ++ +S + S +R+++ D D ++
Sbjct: 38 VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
M KG+ + T S +I+ C R+++ A +++ G PD T++TLIN C EG
Sbjct: 98 MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNT 609
+ +AL L D M++ G P ++T + L+NGL + +A L+ ++ P++V Y
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY-- 215
Query: 610 LIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGN 669
+LK C G A + M +R + Y III G K G+
Sbjct: 216 -------------GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 670 VQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKV 729
+ A++L+ +M GF + L++ AG ++ ++++ ++++ D
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 730 LVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
L++ KEG + + EM + G+ P++
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDT 352
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 286 bits (731), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 172/586 (29%), Positives = 302/586 (51%), Gaps = 20/586 (3%)
Query: 176 GFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
GF +++ +L + R + + V M + PNV++YN+L++G C
Sbjct: 117 GFRVDAIAFTPLLKGLCADKRTS--DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRS 174
Query: 236 EMGLRFFSEMEKN---NCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISY 292
+ L M + +VV+Y T+I+G+ K G D A+ +M +GI P++++Y
Sbjct: 175 QEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTY 234
Query: 293 NVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVR 352
N II LCK + + +LN + + G++PD +TYN++L+GYC G +A+ +M
Sbjct: 235 NSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRS 294
Query: 353 NGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDE 412
+G+ P+VVTY+ L++ +CK+G A + FD M R L+P TY TL+ G++ G L E
Sbjct: 295 DGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVE 354
Query: 413 AYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIIS 472
+ LL+ M +NG P ++ LI + G+V+ A+ V M ++GL P+ V+Y +I
Sbjct: 355 MHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIG 414
Query: 473 GFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSP 532
+S ++ A +M+++G+ P I Y+SLIHGLC + A EL EML RG+
Sbjct: 415 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 474
Query: 533 DEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLL 592
+ + ++I+++C EG + ++ +L + M++ G P+V+TY+ LING + EA KLL
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 593 LKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMP 652
+ P+ V Y+TLI G+C M +A +F+ M P
Sbjct: 535 SGMVSVGLKPNTVTYSTLI---------------NGYCKISRMEDALVLFKEMESSGVSP 579
Query: 653 NEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVI 712
+ Y+II+ G + A +LY ++ SG T +++ L + ++ Q+
Sbjct: 580 DIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMF 639
Query: 713 ENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+N+ +A ++++ K G D ++ + +GL+PN
Sbjct: 640 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPN 685
Score = 283 bits (723), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 179/597 (29%), Positives = 297/597 (49%), Gaps = 44/597 (7%)
Query: 139 LCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNN 198
LC +S +D+V++ + L G +P V SYN +L + R+
Sbjct: 132 LCADKRTSDAMDIVLRRMTEL----------------GCIPNVFSYNILLKGLCDENRSQ 175
Query: 199 WVKFAEEVYNEMGKSR---VSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVV 255
A E+ + M R P+V +Y +I GF GD + + EM L +VV
Sbjct: 176 E---ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVV 232
Query: 256 TYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEI 315
TYN++I CK +D A ++L M G+ P+ ++YN I++G C G+ KE G L ++
Sbjct: 233 TYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKM 292
Query: 316 SRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNL 375
G+ PD VTY+ L++ CK G +A + M + GL P + TY +L+ G L
Sbjct: 293 RSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 352
Query: 376 NRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNAL 435
D M + P+ ++ LI +++ G +D+A + ++M + G P+ VTY A+
Sbjct: 353 VEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAV 412
Query: 436 IKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGV 495
I C GRVEDA+ M +GL+P + Y+++I G + ++A + EM+++G+
Sbjct: 413 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 472
Query: 496 LPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALR 555
+TI ++S+I C++ R+ E+ +LF+ M+ G+ P+ TY TLIN YC G + +A++
Sbjct: 473 CLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMK 532
Query: 556 LHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVI-YNTLI--- 611
L M+ G P+ VTYS LING K +R ME +L K V D+I YN ++
Sbjct: 533 LLSGMVSVGLKPNTVTYSTLINGYCKISR-MEDALVLFKEMESSGVSPDIITYNIILQGL 591
Query: 612 -----------------ENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNE 654
E+ T IE +L G C L ++A ++F+ + +
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651
Query: 655 AVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQV 711
++I+I KVG +A DL+ +G VP+ T ++ + + G+ EEL Q+
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 156/539 (28%), Positives = 278/539 (51%), Gaps = 31/539 (5%)
Query: 207 YNEM---GKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDG 263
YN M G V+P++ TY +LI C G L++G + K + + + L+ G
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 264 YCKLGRIDDAFKL-LRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRK---G 319
C R DA + LR M G PN+ SYN+++ GLC E R +E +L+ ++ G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 320 LVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAM 379
PD V+Y T++NG+ KEG+ +A + EM+ G+ P+VVTY S+I ++CK+ +++AM
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 380 EFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGH 439
E + M + P+ TY ++++G+ G EA L +M +G P +VTY+ L+
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 440 CTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDT 499
C GR +A + M ++GL P++ +Y T++ G++ L + MV G+ PD
Sbjct: 312 CKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDH 371
Query: 500 ITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDE 559
+S LI +Q ++ +A +F +M +G++P+ TY +I C G + A+ ++
Sbjct: 372 YVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 560 MIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-CTN-- 616
MI +G P + Y+ LI+GL + A++L+L++ + + +N++I++ C
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGR 491
Query: 617 -IEFQNV----------------AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDI 659
IE + + L+ G+C+ G M+EA ++ M+ PN Y
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 660 IIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKAL----HTAGMNEELSQVIEN 714
+I+G+ K+ ++ A L+K+M SG P +T ++++ L TA E ++ E+
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITES 610
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 219/418 (52%), Gaps = 23/418 (5%)
Query: 306 KETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG---LSPNVVTY 362
++ + + +E+ R+G N L ++ + A+ + M R G ++P++ TY
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARD-SPAAAVSRYNRMARAGADEVTPDLCTY 90
Query: 363 TSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRL-LNEMT 421
LI C++G L+ + + R + +T L+ G +A + L MT
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 422 KNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARK---GLAPDVVSYSTIISGFSRSQ 478
+ G +P++ +YN L+KG C R ++A+ +LH MA G PDVVSY+T+I+GF +
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEG 210
Query: 479 ELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYT 538
+ DKA+ T EM+++G+LPD +TY+S+I LC+ + + +A E+ M+ G+ PD TY
Sbjct: 211 DSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYN 270
Query: 539 TLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYD 598
++++ YC+ G +A+ +M G PDVVTYS+L++ L K R MEA+K
Sbjct: 271 SILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK-------- 322
Query: 599 ESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYD 658
I++++ + E LL+G+ KG + E + +LM++ P+ V+
Sbjct: 323 -------IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFS 375
Query: 659 IIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENIL 716
I+I ++K G V +A ++ KM + G P+ VT ++ L +G E+ E ++
Sbjct: 376 ILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 433
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 224/476 (47%), Gaps = 38/476 (7%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ Y +A+ + + G P V++Y+ ++D + ++GR A ++++ M
Sbjct: 272 ILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR---CMEARKIFDSMT 328
Query: 212 KSRVSPNVYTYNVLIRGFC------------------GV-----------------GDLE 236
K + P + TY L++G+ G+ G ++
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 237 MGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVII 296
+ FS+M + N VTY +I CK GR++DA M +G+ P I YN +I
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 297 NGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLS 356
+GLC + + + ++ E+ +G+ + + +N++++ +CKEG + ++ L MVR G+
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 357 PNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRL 416
PNV+TY +LIN C +G ++ AM+ M L+PN TY+TLING+ + +++A L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 417 LNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSR 476
EM +G P I+TYN +++G R A + + G ++ +Y+ I+ G +
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 477 SQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFT 536
++ D A + + + + T++ +I L + R EA +LF S G+ P+ +T
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 537 YTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLL 592
Y + +G + + +L M G D + ++ L ++ A L
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 209/429 (48%), Gaps = 3/429 (0%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ Y+ + + +++L +G P ++ ++ + + G+ V A V+++M
Sbjct: 342 LLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK---VDQAMLVFSKMR 398
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ ++PN TY +I C G +E + +F +M + YN+LI G C + +
Sbjct: 399 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 458
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
A +L+ +M +GI N I +N II+ CKEGR+ E++ + + R G+ P+ +TYNTL+
Sbjct: 459 RAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
NGYC G + +A+ L + MV GL PN VTY++LIN CK + A+ F +M +
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVS 578
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P+ TY ++ G Q A L +T++G + TYN ++ G C +DA+ +
Sbjct: 579 PDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQM 638
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
+ L + +++ +I + D+A D G++P+ TY + +
Sbjct: 639 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 698
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
Q + E +LF M G + D ++ G+I +A + +K F + T
Sbjct: 699 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758
Query: 572 YSVLINGLN 580
S+ I+ L+
Sbjct: 759 ASLFIDLLS 767
Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 166/355 (46%), Gaps = 24/355 (6%)
Query: 418 NEMTKNG---FMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGF 474
N M + G P + TY LI C GR++ L + +KG D ++++ ++ G
Sbjct: 73 NRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGL 132
Query: 475 SRSQELDKAFD-TKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSR---GM 530
+ A D R M E G +P+ +Y+ L+ GLC++ R EA EL M G
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192
Query: 531 SPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKK 590
PD +YTT+IN + EGD +A + EM+ +G LPDVVTY+ +I L K +A +
Sbjct: 193 PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252
Query: 591 LLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNH 650
+L + + +P + YN++ L G+C G EA + M
Sbjct: 253 VLNTMVKNGVMPDCMTYNSI---------------LHGYCSSGQPKEAIGFLKKMRSDGV 297
Query: 651 MPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQ 710
P+ Y +++ K G +A ++ M + G P T L++ T G E+
Sbjct: 298 EPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHG 357
Query: 711 VIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNSGRSTYG 765
+++ ++R+ D + +L+ K+G +D + V ++M + GL PN+ TYG
Sbjct: 358 LLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNA--VTYG 410
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/561 (28%), Positives = 291/561 (51%), Gaps = 18/561 (3%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ + + + D ++ ++ G + +YN +++ + R + + FA + +M
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ---LSFALAILGKMM 127
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
K P++ T N L+ GFC + + +M + + VT+ TL+ G + +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A L+ M +KG +P+L++Y +INGLCK G +LN++ + + D V Y+T++
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+ CK ++ AL L EM G+ P+V TY+SLI+ +C G + A M R++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
PN T+ +LI+ F++ G L EA +L +EM + P+IVTYN+LI G C R+++A +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
M K PDVV+Y+T+I+GF +++++ + R+M +G++ +T+TY++LIHG +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
A +F++M+S G+ P+ TY TL++ C G + +A+ + + + + PD+ T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 572 YSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCM 631
Y+++ G+ K + + L L P + YNT+I GFC
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS---------------GFCK 532
Query: 632 KGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVT 691
KGL EA +F M + +P+ Y+ +I H + G+ + +L K+M F T
Sbjct: 533 KGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Query: 692 IIVLVKALHTAGMNEELSQVI 712
++ LH +++ +V+
Sbjct: 593 YGLVTDMLHDGRLDKGFLEVL 613
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/563 (27%), Positives = 286/563 (50%), Gaps = 17/563 (3%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++ EM KSR P++ ++ L+ + ++ + F +ME N+ TYN +I+
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
C+ ++ A +L M G P++++ N ++NG C R+ E +++++ G P
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 168
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D VT+ TL++G + +A+ L MV G P++VTY ++IN +CK G + A+
Sbjct: 169 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 228
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
++M ++ + Y+T+I+ ++ +D+A L EM G P + TY++LI C
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
GR DA +L M + + P+VV+++++I F++ +L +A EM+++ + P+ +TY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+SLI+G C R+ EA ++F M+S+ PD TY TLIN +C + + L +M +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+G + + VTY+ LI+G + + A+ + ++ D P+ + YNTL++
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD---------- 458
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
G C G + +A VFE + + P+ Y+I+ G K G V+ +DL+ +
Sbjct: 459 -----GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 683 SGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDA 742
G P + ++ G+ EE + + L D+ L+ + ++G+ A
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 743 VLNVLTEMAKDGLLPNSGRSTYG 765
++ EM ++ STYG
Sbjct: 574 SAELIKEMRSCRFAGDA--STYG 594
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 132/481 (27%), Positives = 236/481 (49%), Gaps = 19/481 (3%)
Query: 282 LKGIEPNLISYNVIINGLCKEG----RLKETKGILNEISRKGLVPDEVTYNTLLNGYCKE 337
L+GI + +SY+ L + +L E + E+ + P V ++ LL+ K
Sbjct: 19 LRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKM 78
Query: 338 GNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTY 397
+ +M G+S N+ TY +IN +C+ L+ A+ +M P+ T
Sbjct: 79 KKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTL 138
Query: 398 TTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMAR 457
+L+NGF + EA L+++M + G+ P VT+ L+ G + +AV ++ M
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 458 KGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITE 517
KG PD+V+Y +I+G + E D A + +M + + D + YS++I LC+ R + +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 518 ACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLIN 577
A LF EM ++G+ PD FTY++LI+ C G A RL +M+++ P+VVT++ LI+
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 578 GLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNE 637
K+ + +EA+KL ++ P+ V YN+LI GFCM ++E
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN---------------GFCMHDRLDE 363
Query: 638 ADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVK 697
A ++F LM+ ++ +P+ Y+ +I+G K V +L++ M R G V +TVT L+
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 698 ALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLP 757
A + V + ++ + L++ K G ++ + V + K + P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 758 N 758
+
Sbjct: 484 D 484
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 283 bits (725), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/615 (29%), Positives = 299/615 (48%), Gaps = 75/615 (12%)
Query: 150 DLVVKSYSH-LNMIDKAVNIVN-LAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVY 207
+L +KS SH +D A++ + + + F V N ++ +R R + A +Y
Sbjct: 74 ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAV-DCNKVIGVFVRMNRPD---VAISLY 129
Query: 208 NEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKL 267
+M R+ N+Y++N+LI+ FC L L F ++ K +VVT+NTL+ G C
Sbjct: 130 RKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLE 189
Query: 268 GRIDDAF---------------KLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGIL 312
RI +A L M G+ P +I++N +INGLC EGR+ E ++
Sbjct: 190 DRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALV 249
Query: 313 NEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKS 372
N++ KGL D VTY T++NG CK G+ AL L ++M + P+VV Y+++I+ +CK
Sbjct: 250 NKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKD 309
Query: 373 GNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLL--------------- 417
G+ + A F +M + + PN TY +I+GF G +A RLL
Sbjct: 310 GHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTF 369
Query: 418 --------------------NEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMAR 457
+EM P VTYN++I G C R +DA + MA
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA- 428
Query: 458 KGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITE 517
+PDVV+++TII + R++ +D+ RE+ +G++ +T TY++LIHG CE +
Sbjct: 429 ---SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNA 485
Query: 518 ACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLIN 577
A +LFQEM+S G+ PD T L+ +C + +AL L + + D V Y+++I+
Sbjct: 486 AQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIH 545
Query: 578 GLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNE 637
G+ K ++ EA L L P YN +I GFC K +++
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI---------------SGFCGKSAISD 590
Query: 638 ADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVK 697
A+ +F M H P+ + Y+ +I G K G + K+ +L +M +GF TI ++
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Query: 698 ALHTAGMNEELSQVI 712
+ +++ S ++
Sbjct: 651 LITDGRLDKSFSDML 665
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 148/568 (26%), Positives = 272/568 (47%), Gaps = 34/568 (5%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A + ++ M +SR N +I F + ++ + + +ME N+ ++N LI
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKET-------------- 308
+C ++ + + G +P+++++N +++GLC E R+ E
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 309 -KGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLIN 367
+ +++ GL P +T+NTL+NG C EG + +A L +MV GL +VVTY +++N
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 368 SMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMP 427
MCK G+ A+ +M ++P+ Y+ +I+ + G +A L +EM + G P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 428 SIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTK 487
++ TYN +I G C+ GR DA +L M + + PDV++++ +IS + +L +A
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 488 REMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTE 547
EM+ + + PDT+TY+S+I+G C+ R +A +F M SPD T+ T+I+ YC
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRA 445
Query: 548 GDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIY 607
+ + ++L E+ ++G + + TY+ LI+G + A+ L ++ P +
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 608 NTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKV 667
N LL GFC + EA +FE++ + Y+IIIHG K
Sbjct: 506 NI---------------LLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 668 GNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELA 727
V +A+DL+ + G P T V++ + + + + + D
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTY 610
Query: 728 KVLVEINHKEGNMDAVLNVLTEMAKDGL 755
L+ K G +D + +++EM +G
Sbjct: 611 NTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 204/399 (51%), Gaps = 15/399 (3%)
Query: 129 VFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAIL 188
+ S ++ET+ D SA+ID + K H + A + + G P V +YN ++
Sbjct: 283 LLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD----AQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 189 DSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKN 248
D GR W A+ + +M + ++P+V T+N LI G L + EM
Sbjct: 339 DGFCSFGR--WSD-AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 249 NCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKET 308
+ VTYN++I G+CK R DDA + M P+++++N II+ C+ R+ E
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 451
Query: 309 KGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINS 368
+L EISR+GLV + TYNTL++G+C+ NL+ A L EM+ +G+ P+ +T L+
Sbjct: 452 MQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG 511
Query: 369 MCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPS 428
C++ L A+E F+ + + ++ + Y +I+G + +DEA+ L + +G P
Sbjct: 512 FCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 429 IVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKR 488
+ TYN +I G C + DA + H M G PD +Y+T+I G ++ E+DK+ +
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELIS 631
Query: 489 EMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLS 527
EM G D T ++ L R+ ++ F +MLS
Sbjct: 632 EMRSNGFSGDAFTI-KMVADLITDGRLDKS---FSDMLS 666
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 35/287 (12%)
Query: 472 SGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMS 531
SG + LD A D MV + + +I R A L+++M R +
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 532 PDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKL 591
+ +++ LI +C + +L ++ + GF PDVVT++ L++GL + R EA L
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 592 LLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHM 651
+ + + +++ ++E L+ G C++G + EA + M+ +
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 652 PNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQV 711
+ Y I++G K+G+ + A +L KM + P V S +
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI----------------YSAI 302
Query: 712 IENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
I+ + + SDA+ + +EM + G+ PN
Sbjct: 303 IDRLCKDGHHSDAQY-------------------LFSEMLEKGIAPN 330
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 280 bits (717), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 284/553 (51%), Gaps = 23/553 (4%)
Query: 74 TLTLKFLKWAQPQPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLA--------------V 119
T +K L+ QP T L+ L ++ F + S + +++ V
Sbjct: 8 TTNMKALRLIQPHLLKTGSLRTDLLCTISSF--FSSCERDFSSISNGNVCFRERLRSGIV 65
Query: 120 DLPRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMP 179
D+ +DD +F + + L S + ++ N++ ++ +++G
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIART-KQFNLV---LDFCKQLELNGIAH 121
Query: 180 GVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGL 239
+ + N +++ R + FA V ++ K P+ T+N LI+G G + +
Sbjct: 122 NIYTLNIMINCFCRCCKTC---FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 240 RFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGL 299
M +N C +VVTYN++++G C+ G A LLR M + ++ ++ +Y+ II+ L
Sbjct: 179 VLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL 238
Query: 300 CKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNV 359
C++G + + E+ KG+ VTYN+L+ G CK G + +L +MV + PNV
Sbjct: 239 CRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNV 298
Query: 360 VTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNE 419
+T+ L++ K G L A E + +M R + PN TY TL++G+ L EA +L+
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDL 358
Query: 420 MTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQE 479
M +N P IVT+ +LIKG+C RV+D + V ++++GL + V+YS ++ GF +S +
Sbjct: 359 MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 480 LDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTT 539
+ A + +EMV GVLPD +TY L+ GLC+ ++ +A E+F+++ M YTT
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 540 LINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDE 599
+I C G + A L + KG P+V+TY+V+I+GL K+ EA LL K+ D
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 600 SVPSDVIYNTLIE 612
+ P+D YNTLI
Sbjct: 539 NAPNDCTYNTLIR 551
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 246/418 (58%), Gaps = 3/418 (0%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
+ +AV +V+ +G P V++YN+I++ + RSG + A ++ +M + V +V+T
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS---LALDLLRKMEERNVKADVFT 230
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMG 281
Y+ +I C G ++ + F EME ++VVTYN+L+ G CK G+ +D LL+DM
Sbjct: 231 YSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV 290
Query: 282 LKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLH 341
+ I PN+I++NV+++ KEG+L+E + E+ +G+ P+ +TYNTL++GYC + L
Sbjct: 291 SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLS 350
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLI 401
+A + MVRN SP++VT+TSLI C ++ M+ F + R L N TY+ L+
Sbjct: 351 EANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILV 410
Query: 402 NGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLA 461
GF Q G + A L EM +G +P ++TY L+ G C G++E A+ + + + +
Sbjct: 411 QGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMD 470
Query: 462 PDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACEL 521
+V Y+TII G + +++ A++ + KGV P+ +TY+ +I GLC++ ++EA L
Sbjct: 471 LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Query: 522 FQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGL 579
++M G +P++ TY TLI A+ +GD+ + +L +EM GF D + ++I+ L
Sbjct: 531 LRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/532 (27%), Positives = 277/532 (52%), Gaps = 17/532 (3%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A ++ EM +SR P++ ++ + L F ++E N N+ T N +I+
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C+ + A+ +L + G EP+ ++N +I GL EG++ E +++ + G P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D VTYN+++NG C+ G+ AL L +M + +V TY+++I+S+C+ G ++ A+ F
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M + ++ + TY +L+ G + G ++ LL +M +P+++T+N L+
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
G++++A + M +G++P++++Y+T++ G+ L +A + MV PD +T+
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+SLI G C +R+ + ++F+ + RG+ + TY+ L+ +C G I A L EM+
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVS 431
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
G LPDV+TY +L++GL + +A ++ L + V+Y T+IE
Sbjct: 432 HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE---------- 481
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
G C G + +A +F + + PN Y ++I G K G++ +A L +KM
Sbjct: 482 -----GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 683 SGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLS-DAELAKVLVEI 733
G P+ T L++A G +++IE ++SC S DA K+++++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE-MKSCGFSADASSIKMVIDM 587
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 220/449 (48%), Gaps = 15/449 (3%)
Query: 310 GILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSM 369
+ E+ R +P V ++ + + + L ++ NG++ N+ T +IN
Sbjct: 74 ALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCF 133
Query: 370 CKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSI 429
C+ A ++ P+ T+ TLI G G + EA L++ M +NG P +
Sbjct: 134 CRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDV 193
Query: 430 VTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
VTYN+++ G C G A+ +L M + + DV +YSTII R +D A +E
Sbjct: 194 VTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKE 253
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
M KG+ +TY+SL+ GLC+ + + L ++M+SR + P+ T+ L++ + EG
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGK 313
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNT 609
+ +A L+ EMI +G P+++TY+ L++G Q R EA +L + ++ P V + +
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 610 LIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGN 669
LI KG+CM +++ +VF + +R + N Y I++ G + G
Sbjct: 374 LI---------------KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGK 418
Query: 670 VQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKV 729
++ A +L+++MV G +P +T +L+ L G E+ ++ E++ +S +
Sbjct: 419 IKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTT 478
Query: 730 LVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
++E K G ++ N+ + G+ PN
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPN 507
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 183/646 (28%), Positives = 309/646 (47%), Gaps = 68/646 (10%)
Query: 152 VVKSYSHLNMIDKAVNIVNL--AKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
VV ++ N IDKA L ++ P V YN +L+S I+ R V+F +Y +
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERR---VEFVSWLYKD 137
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M ++P YT+N+LIR C ++ F EM + C N T+ L+ GYCK G
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
D +LL M G+ PN + YN I++ C+EGR +++ ++ ++ +GLVPD VT+N+
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNS 257
Query: 330 LLNGYCKEGNLHQALVLHAEMVRN---GL-SPNVVTYTSLINSMCKSGNLNRAMEFFDQM 385
++ CKEG + A + ++M + GL PN +TY ++ CK G L A F+ +
Sbjct: 258 RISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESI 317
Query: 386 HVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRV 445
+ + ++Y + G +HG EA +L +MT G PSI +YN L+ G C G +
Sbjct: 318 RENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGML 377
Query: 446 EDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSL 505
DA ++ M R G+ PD V+Y ++ G+ ++D A +EM+ LP+ T + L
Sbjct: 378 SDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNIL 437
Query: 506 IHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQA------LRLH-- 557
+H L + RI+EA EL ++M +G D T +++ C G++ +A +R+H
Sbjct: 438 LHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGS 497
Query: 558 ---------------DEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVP 602
D +I+ LPD++TYS L+NGL K R EAK L ++ ++ P
Sbjct: 498 AALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
Query: 603 SDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIH 662
V YN I + FC +G ++ A RV + M ++ + Y+ +I
Sbjct: 558 DSVAYNIFIHH---------------FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 663 GHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRS---- 718
G + + + L +M G P+ T ++ L E+ + +++ +++
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 719 ------------CRLSDAELAKVLVE-----INHKEGNMDAVLNVL 747
C++ D ++A+ + E KEG + N L
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNEL 708
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 174/614 (28%), Positives = 279/614 (45%), Gaps = 78/614 (12%)
Query: 151 LVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEM 210
++V+ Y + DK + ++N + G +P + YN I+ S R GRN+ + E E
Sbjct: 187 ILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREE 246
Query: 211 G--------KSRVS----------------------------PNVYTYNVLIRGFCGVGD 234
G SR+S PN TYN++++GFC VG
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGL 306
Query: 235 LEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNV 294
LE F + +N+ LA++ +YN + G + G+ +A +L+ M KGI P++ SYN+
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 295 IINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
+++GLCK G L + K I+ + R G+ PD VTY LL+GYC G + A L EM+RN
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 355 LSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAY 414
PN T L++S+ K G ++ A E +M+ + + T +++G G LD+A
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 415 RLLNEM-----------------------TKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
++ M +N +P ++TY+ L+ G C GR +A +
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
M + L PD V+Y+ I F + ++ AF ++M +KG TY+SLI GL
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
+ +I E L EM +G+SP+ TY T I C + A L DEM+QK P+V +
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 572 YSVLINGLNK-------------QARTMEAKKLLLKLFYDESVPSDVIYNT--LIENCTN 616
+ LI K K+ L L ++E + + + L+E +
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLD 726
Query: 617 IEFQNVAALLK----GFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQK 672
F+ L K C K + A + M+ R + + A +I G K+GN ++
Sbjct: 727 RGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKE 786
Query: 673 AYDLYKKMVRSGFV 686
A KM+ V
Sbjct: 787 ANSFADKMMEMASV 800
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 193/418 (46%), Gaps = 27/418 (6%)
Query: 357 PNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRL 416
P+V Y L+ S K + + M + + P T+ LI +D A L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 417 LNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSR 476
+EM + G P+ T+ L++G+C G + + +L+ M G+ P+ V Y+TI+S F R
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 477 SQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEM-------LSRG 529
D + +M E+G++PD +T++S I LC++ ++ +A +F +M L R
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR- 288
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
P+ TY ++ +C G + A L + + + L + +Y++ + GL + + +EA+
Sbjct: 289 --PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAE 346
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRN 649
+L ++ PS YN L++ G C G++++A + LM +
Sbjct: 347 TVLKQMTDKGIGPSIYSYNILMD---------------GLCKLGMLSDAKTIVGLMKRNG 391
Query: 650 HMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELS 709
P+ Y ++HG+ VG V A L ++M+R+ +P+ T +L+ +L G E
Sbjct: 392 VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAE 451
Query: 710 QVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDG--LLPNSGRSTYG 765
+++ + D ++V+ G +D + ++ M G L N G S G
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 181/368 (49%), Gaps = 23/368 (6%)
Query: 399 TLINGFSQHGFLDEAYRLLNEMTKNGF---MPSIVTYNALIKGHCTGGRVEDAVGVLHGM 455
++++ F++ +D+A+ ++ ++ F PS+ YN L++ RVE + M
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 456 ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRI 515
G+AP +++ +I S +D A + EM EKG P+ T+ L+ G C+
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 516 TEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVL 575
+ EL M S G+ P++ Y T+++++C EG + ++ ++M ++G +PD+VT++
Sbjct: 199 DKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSR 258
Query: 576 INGLNKQARTMEAKKLLLKLFYDESV----PSDVIYNTLIENCTNIEFQNVAALLKGFCM 631
I+ L K+ + ++A ++ + DE + P+ + YN + LKGFC
Sbjct: 259 ISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM---------------LKGFCK 303
Query: 632 KGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVT 691
GL+ +A +FE + + + + + Y+I + G + G +A + K+M G P +
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 692 IIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMA 751
+L+ L GM + ++ + R+ DA L+ G +DA ++L EM
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 752 KDGLLPNS 759
++ LPN+
Sbjct: 424 RNNCLPNA 431
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 278 bits (712), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 280/553 (50%), Gaps = 21/553 (3%)
Query: 202 FAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLI 261
FA V M K + NVY +N+L++G C + + EM +N+ + +V +YNT+I
Sbjct: 125 FAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 262 DGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLV 321
G+C+ ++ A +L +M G +L+++ ++I+ CK G++ E G L E+ GL
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 322 PDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEF 381
D V Y +L+ G+C G L + L E++ G SP +TY +LI CK G L A E
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 382 FDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCT 441
F+ M R +RPN TYT LI+G G EA +LLN M + P+ VTYN +I C
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 442 GGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVL--PDT 499
G V DAV ++ M ++ PD ++Y+ ++ G +LD+A M++ PD
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 500 ITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDE 559
I+Y++LIHGLC++ R+ +A +++ ++ + + D T L+N+ GD+ +A+ L +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 560 MIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEF 619
+ + + TY+ +I+G K AK LL K+ E PS YN
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN----------- 533
Query: 620 QNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKK 679
LL C +G +++A R+FE M + N+ P+ ++I+I G K G+++ A L
Sbjct: 534 ----CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 680 MVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGN 739
M R+G P T L+ G +E + ++ S DA + +++ +G
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGE 649
Query: 740 MDAVLNVLTEMAK 752
D LTE+ K
Sbjct: 650 TDK----LTELVK 658
Score = 269 bits (688), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 299/594 (50%), Gaps = 23/594 (3%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ Y + A ++ L GF V ++N +L + R N A + EM
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR---NLECGKAVSLLREMR 169
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
++ + P+V++YN +IRGFC +LE L +EM+ + C ++VT+ LID +CK G++D
Sbjct: 170 RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMD 229
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A L++M G+E +L+ Y +I G C G L K + +E+ +G P +TYNTL+
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI 289
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
G+CK G L +A + M+ G+ PNV TYT LI+ +C G A++ + M ++
Sbjct: 290 RGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE 349
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
PN TY +IN + G + +A ++ M K P +TYN L+ G C G +++A +
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 452 LHGMARKG--LAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
L+ M + PDV+SY+ +I G + L +A D +VEK D +T + L++
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
+ + +A EL++++ + + TYT +I+ +C G + A L +M P V
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNI-EFQNVAALLKG 628
Y+ L++ L K+ +A +L ++ D + P V +N +I+ + ++ +LL G
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
GL P+ Y +I+ K+G + +A + KMV SGF P
Sbjct: 590 MSRAGL----------------SPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVE-INHKEGNMD 741
++K + G ++L+++++ ++ + D EL +++ + + NMD
Sbjct: 634 AHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMD 687
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 233/450 (51%), Gaps = 5/450 (1%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ + +D+ + + G P ++YN ++ + G+ +K A E++ M
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQ---LKEASEIFEFMI 309
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ V PNVYTY LI G CGVG + L+ + M + + N VTYN +I+ CK G +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLV--PDEVTYNT 329
DA +++ M + P+ I+YN+++ GLC +G L E +L + + PD ++YN
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++G CKE LHQAL ++ +V + + VT L+NS K+G++N+AME + Q+ +
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
+ N TYT +I+GF + G L+ A LL +M + PS+ YN L+ C G ++ A
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
+ M R PDVVS++ +I G ++ ++ A M G+ PD TYS LI+
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
+ + EA F +M+ G PD +++ ++G+ + L +++ K + D
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDK 669
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDE 599
+++ + + M+ K LL++ D+
Sbjct: 670 ELTCTVMDYMCNSSANMDLAKRLLRVTDDK 699
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 226/494 (45%), Gaps = 69/494 (13%)
Query: 328 NTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHV 387
N L+ + N A + +M+ N V+ + L+ + A M
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 388 RELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG----- 442
R N + L+ G ++ +A LL EM +N MP + +YN +I+G C G
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 443 ------------------------------GRVEDAVGVLHGMARKGLAPDVVSYSTIIS 472
G++++A+G L M GL D+V Y+++I
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 473 GFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSP 532
GF ELD+ E++E+G P ITY++LI G C+ ++ EA E+F+ M+ RG+ P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 533 DEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLL 592
+ +TYT LI+ C G +AL+L + MI+K P+ VTY+++IN L K +A +++
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIV 375
Query: 593 LKLFYDESVPSDVIYNTLI----------------------ENCTNIEFQNVAALLKGFC 630
+ + P ++ YN L+ + T+ + + AL+ G C
Sbjct: 376 ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLC 435
Query: 631 MKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTV 690
+ +++A +++L++++ + +I+++ K G+V KA +L+K++ S V ++
Sbjct: 436 KENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD 495
Query: 691 TIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEIN------HKEGNMDAVL 744
T ++ GM V + +L C++ +EL + + N KEG++D
Sbjct: 496 TYTAMIDGFCKTGM----LNVAKGLL--CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549
Query: 745 NVLTEMAKDGLLPN 758
+ EM +D P+
Sbjct: 550 RLFEEMQRDNNFPD 563
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 175/417 (41%), Gaps = 62/417 (14%)
Query: 383 DQMHVRELRPNEKTYTTLINGFSQ-----------------------HGFLDE------- 412
D+ VR+L N + Y+ L+N FS+ +D
Sbjct: 16 DEHVVRKL-LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFA 74
Query: 413 ----------------AYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMA 456
A+ +M + + V+ + L++ + + A GVL M
Sbjct: 75 GNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALML 134
Query: 457 RKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRIT 516
++G A +V +++ ++ G R+ E KA REM ++PD +Y+++I G CE + +
Sbjct: 135 KRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELE 194
Query: 517 EACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLI 576
+A EL EM G S T+ LI+A+C G + +A+ EM G D+V Y+ LI
Sbjct: 195 KALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLI 254
Query: 577 NGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMN 636
G K L ++ P + YNTLI +GFC G +
Sbjct: 255 RGFCDCGELDRGKALFDEVLERGDSPCAITYNTLI---------------RGFCKLGQLK 299
Query: 637 EADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLV 696
EA +FE M++R PN Y +I G VG ++A L M+ P+ VT +++
Sbjct: 300 EASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII 359
Query: 697 KALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKD 753
L G+ + +++E + + D +L+ +G++D +L M KD
Sbjct: 360 NKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKD 416
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 275 bits (703), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 199/745 (26%), Positives = 328/745 (44%), Gaps = 97/745 (13%)
Query: 51 NSLSSEFTPEAAFNLLL-KTQSDQTLTLKFLKWAQPQPFFTPKLKCLTLHIL--TKFKLY 107
++LS E PE ++L K D + L F W Q KL + L F +
Sbjct: 54 SNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSF 113
Query: 108 KSAQTLAQNLAVDLPRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVN 167
+ A ++ + + ++ S ++ + + + ++ Y I++AV
Sbjct: 114 EKALSVVERM-IERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVF 172
Query: 168 IVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIR 227
+ + + +P + +LD+++R R + +VY M + V +V TY++LI
Sbjct: 173 VFSSSMGLELVPRLSRCKVLLDALLRWNR---LDLFWDVYKGMVERNVVFDVKTYHMLII 229
Query: 228 GFCGVGDLEMG--LRFFSEMEKNNCLANV-------------------VTYNTLIDGYCK 266
C G++++G + F +E E NV TY+ LIDG CK
Sbjct: 230 AHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289
Query: 267 LGRIDDAFKLLRDMGLKGIEPNLISYNVIINGL--------------------------- 299
+ R++DA LL +M G+ + +Y+++I+GL
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 300 --------CKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMV 351
KEG +++ K + + + GL+P Y +L+ GYC+E N+ Q L EM
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 352 RNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLD 411
+ + + TY +++ MC SG+L+ A +M RPN YTTLI F Q+
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 412 EAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTII 471
+A R+L EM + G P I YN+LI G R+++A L M GL P+ +Y I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 472 SGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMS 531
SG+ + E A +EM E GVLP+ + + LI+ C++ ++ EAC ++ M+ +G+
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGIL 589
Query: 532 PDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKL 591
D TYT L+N + A + EM KG PDV +Y VLING +K +A +
Sbjct: 590 GDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI 649
Query: 592 LLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHM 651
++ + P+ +IYN LL GFC G + +A + + M +
Sbjct: 650 FDEMVEEGLTPNVIIYNM---------------LLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 652 PNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQV 711
PN Y II G+ K G++ +A+ L+ +M G VP + LV
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG------------- 741
Query: 712 IENILRSCRLSDAELAKVLVEINHK 736
CRL+D E A + N K
Sbjct: 742 ------CCRLNDVERAITIFGTNKK 760
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 276/602 (45%), Gaps = 60/602 (9%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A+ +++ M S + P Y LI G+C ++ G EM+K N + + TY T++
Sbjct: 366 AKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVK 425
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
G C G +D A+ ++++M G PN++ Y +I + R + +L E+ +G+ P
Sbjct: 426 GMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAP 485
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D YN+L+ G K + +A EMV NGL PN TY + I+ ++ A ++
Sbjct: 486 DIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYV 545
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M + PN+ T LIN + + G + EA M G + TY L+ G
Sbjct: 546 KEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKN 605
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
+V+DA + M KG+APDV SY +I+GFS+ + KA EMVE+G+ P+ I Y
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+ L+ G C I +A EL EM +G+ P+ TY T+I+ YC GD+ +A RL DEM
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKL 725
Query: 563 KGFLPDVVTYSVLING---LNKQARTM------------------------------EAK 589
KG +PD Y+ L++G LN R + E K
Sbjct: 726 KGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELK 785
Query: 590 KLLLKLFYDESV-----PSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFEL 644
+L D S P+DV YN +I+ C +G + A +F
Sbjct: 786 TEVLNRLMDGSFDRFGKPNDVTYNIMIDY---------------LCKEGNLEAAKELFHQ 830
Query: 645 MLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGM 704
M N MP Y +++G+ K+G + + ++ + + +G P + V++ A GM
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 705 NEELSQVIENILR------SCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ +++ + C+LS + L+ K G M+ V+ M + +P+
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLS-ISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 759 SG 760
S
Sbjct: 950 SA 951
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 174/630 (27%), Positives = 296/630 (46%), Gaps = 106/630 (16%)
Query: 150 DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
D + S +++KA + + G +P +Y ++++ R V+ E+ E
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN---VRQGYELLVE 407
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M K + + YTY +++G C GDL+ EM + C NVV Y TLI + + R
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
DA ++L++M +GI P++ YN +I GL K R+ E + L E+ GL P+ TY
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 330 LLNGY-----------------------------------CKEGNLHQALVLHAEMVRNG 354
++GY CK+G + +A + MV G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 355 LSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAY 414
+ + TYT L+N + K+ ++ A E F +M + + P+ +Y LINGFS+ G + +A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 415 RLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGF 474
+ +EM + G P+++ YN L+ G C G +E A +L M+ KGL P+ V+Y TII G+
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 475 SRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE----QRRIT------EAC----- 519
+S +L +AF EM KG++PD+ Y++L+ G C +R IT + C
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 520 ---------------ELFQEMLSRGMS--------PDEFTYTTLINAYCTEGDIPQALRL 556
EL E+L+R M P++ TY +I+ C EG++ A L
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 557 HDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESV-----PSDVIYNTLI 611
+M +P V+TY+ L+NG +K R E + +DE++ P ++Y+ +I
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV-----FDEAIAAGIEPDHIMYSVII 882
Query: 612 ENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDI-----IIHGHSK 666
F +G+ +A + + M +N + + I ++ G +K
Sbjct: 883 ---------------NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAK 927
Query: 667 VGNVQKAYDLYKKMVRSGFVPHTVTIIVLV 696
VG ++ A + + MVR ++P + T+I L+
Sbjct: 928 VGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 220 bits (560), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 139/505 (27%), Positives = 229/505 (45%), Gaps = 83/505 (16%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++K++ + A+ ++ K G P + YN+++ + ++ R + A EM
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE---ARSFLVEMV 514
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
++ + PN +TY I G+ + ++ EM + L N V LI+ YCK G++
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A R M +GI + +Y V++NGL K ++ + + I E+ KG+ PD +Y L+
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
NG+ K GN+ +A + EMV GL+PNV+ Y L+ C+SG + +A E D+M V+ L
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
PN TY T+I+G+ + G L EA+RL +EM G +P Y L+ G C VE A+ +
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 452 LHGMARKGLA---------------------------------------PDVVSYSTIIS 472
G +KG A P+ V+Y+ +I
Sbjct: 755 F-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 473 GFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSP 532
+ L+ A + +M ++P ITY+SL++G + R E +F E ++ G+ P
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 533 DEFTYTTLINAYCTEGDIPQALRLHDEMIQK----------------------------- 563
D Y+ +INA+ EG +AL L D+M K
Sbjct: 874 DHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
Query: 564 -----------GFLPDVVTYSVLIN 577
++PD T LIN
Sbjct: 934 AEKVMENMVRLQYIPDSATVIELIN 958
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 155/638 (24%), Positives = 278/638 (43%), Gaps = 78/638 (12%)
Query: 183 SYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRV-----SPNVYTYNVLIRGFCGVGDLEM 237
S+ L V R NW EV++ + + S + + +L G+ G +E
Sbjct: 112 SFEKALSVVERMIERNWP--VAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEE 169
Query: 238 GLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIIN 297
+ FS + + L+D + R+D + + + M + + ++ +Y+++I
Sbjct: 170 AVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLII 229
Query: 298 GLCKEGRLKETKGILNEISR---------------------KGLVPDEVTYNTLLNGYCK 336
C+ G ++ K +L + + KGLVP + TY+ L++G CK
Sbjct: 230 AHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCK 289
Query: 337 EGNLHQALVLHAEMVRNGLSPNVVTYTSLINS---------------------------- 368
L A L EM G+S + TY+ LI+
Sbjct: 290 IKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYM 349
Query: 369 -------MCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMT 421
M K G + +A FD M L P + Y +LI G+ + + + Y LL EM
Sbjct: 350 YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMK 409
Query: 422 KNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELD 481
K + S TY ++KG C+ G ++ A ++ M G P+VV Y+T+I F ++
Sbjct: 410 KRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFG 469
Query: 482 KAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLI 541
A +EM E+G+ PD Y+SLI GL + +R+ EA EM+ G+ P+ FTY I
Sbjct: 470 DAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI 529
Query: 542 NAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESV 601
+ Y + A + EM + G LP+ V + LIN K+ + +EA
Sbjct: 530 SGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS----------- 578
Query: 602 PSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIII 661
Y ++++ + + L+ G +++A+ +F M + P+ Y ++I
Sbjct: 579 ----AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 662 HGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRL 721
+G SK+GN+QKA ++ +MV G P+ + +L+ +G E+ ++++ +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 722 SDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
+A +++ K G++ + EM GL+P+S
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/384 (30%), Positives = 196/384 (51%), Gaps = 21/384 (5%)
Query: 175 HGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGD 234
G + +Y +++ + + N+ V AEE++ EM ++P+V++Y VLI GF +G+
Sbjct: 586 QGILGDAKTYTVLMNGLFK---NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 235 LEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNV 294
++ F EM + NV+ YN L+ G+C+ G I+ A +LL +M +KG+ PN ++Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 295 IINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
II+G CK G L E + +E+ KGLVPD Y TL++G C+ ++ +A+ + + G
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKG 761
Query: 355 LSPNVVTYTSLINSMCKSGN-------LNRAME-FFDQMHVRELRPNEKTYTTLINGFSQ 406
+ + + +LIN + K G LNR M+ FD+ +PN+ TY +I+ +
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG----KPNDVTYNIMIDYLCK 817
Query: 407 HGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVS 466
G L+ A L ++M MP+++TY +L+ G+ GR + V G+ PD +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 467 YSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYS-----SLIHGLCEQRRITEACEL 521
YS II+ F + KA +M K + D S +L+ G + + A ++
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 522 FQEMLSRGMSPDEFTYTTLINAYC 545
+ M+ PD T LIN C
Sbjct: 938 MENMVRLQYIPDSATVIELINESC 961
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 208/501 (41%), Gaps = 51/501 (10%)
Query: 269 RIDDAFKLLRDMGL----KGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDE 324
R+DD KLL K E L S++ + LC G ++ ++ + + E
Sbjct: 73 RVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAE 132
Query: 325 VTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQ 384
V +++++ C + E V G S + V + L + G + A+ F
Sbjct: 133 V-WSSIVR--CSQ-----------EFV--GKSDDGVLFGILFDGYIAKGYIEEAVFVFSS 176
Query: 385 MHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGR 444
EL P L++ + LD + + M + + + TY+ LI HC G
Sbjct: 177 SMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGN 236
Query: 445 VEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSS 504
V+ L DV+ + T + + +D A K M+ KG++P TY
Sbjct: 237 VQ-------------LGKDVL-FKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDV 282
Query: 505 LIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKG 564
LI GLC+ +R+ +A L EM S G+S D TY+ LI+ + A L EM+ G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342
Query: 565 FLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAA 624
Y I ++K+ +AK L +D + S +I Q A+
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKAL-----FDGMIASGLIPQA----------QAYAS 387
Query: 625 LLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSG 684
L++G+C + + + + M +RN + + Y ++ G G++ AY++ K+M+ SG
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 685 FVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVL 744
P+ V L+K + +V++ + D L+ K MD
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 745 NVLTEMAKDGLLPNSGRSTYG 765
+ L EM ++GL PN+ TYG
Sbjct: 508 SFLVEMVENGLKPNA--FTYG 526
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 133 LKETYHLCDS------TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNA 186
L E + L D S V +V LN +++A+ I K G +NA
Sbjct: 713 LAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNA 771
Query: 187 ILDSVIRSGRNNWVKFAEEVYNEMGKSRVS----PNVYTYNVLIRGFCGVGDLEMGLRFF 242
+++ V + G+ + EV N + PN TYN++I C G+LE F
Sbjct: 772 LINWVFKFGKT---ELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 243 SEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKE 302
+M+ N + V+TY +L++GY K+GR + F + + GIEP+ I Y+VIIN KE
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 303 GRLKETKGILNEISRKGLVPDEV-----TYNTLLNGYCKEGNLHQALVLHAEMVRNGLSP 357
G + +++++ K V D T LL+G+ K G + A + MVR P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 358 NVVTYTSLINSMCKSGN 374
+ T LIN C S N
Sbjct: 949 DSATVIELINESCISSN 965
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/541 (31%), Positives = 285/541 (52%), Gaps = 21/541 (3%)
Query: 151 LVVKSYSHLNMIDKAVNIVN-LAKVHGFMPGVLSYNAILDSVIRSG-RNNWVKFAEEVYN 208
+V ++Y ++ DKAV++ + + V S+N++L+ +I G + ++F + V N
Sbjct: 117 VVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVN 176
Query: 209 EMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLG 268
+SPN ++N++I+ C + ++ + F M + CL + TY TL+DG CK
Sbjct: 177 SNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE 236
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
RID+A LL +M +G P+ + YNV+I+GLCK+G L +++ + KG VP+EVTYN
Sbjct: 237 RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYN 296
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
TL++G C +G L +A+ L MV + PN VTY +LIN + K A+ M R
Sbjct: 297 TLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER 356
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
N+ Y+ LI+G + G +EA L +M + G P+IV Y+ L+ G C G+ +A
Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEA 416
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+L+ M G P+ +YS+++ GF ++ ++A +EM + G + YS LI G
Sbjct: 417 KEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMI---QKGF 565
LC R+ EA ++ +ML+ G+ PD Y+++I C G + AL+L+ EM+ +
Sbjct: 477 LCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 566 LPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVI-----YNTLIENCTNIEF- 619
PDVVTY++L++GL Q A LL + D DVI NTL E + +
Sbjct: 537 QPDVVTYNILLDGLCMQKDISRAVDLLNSML-DRGCDPDVITCNTFLNTLSEKSNSCDKG 595
Query: 620 -----QNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAY 674
+ V LLK + ++ A + E+ML + P + + +I+ K + A
Sbjct: 596 RSFLEELVVRLLK----RQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAI 651
Query: 675 D 675
D
Sbjct: 652 D 652
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 205/396 (51%), Gaps = 6/396 (1%)
Query: 150 DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
+LV+K+ L +D+A+ + +P +Y ++D + + R + A + +E
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEER---IDEAVLLLDE 247
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M SP+ YNVLI G C GDL + M C+ N VTYNTLI G C G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
+D A LL M PN ++Y +INGL K+ R + +L+ + +G ++ Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++G KEG +A+ L +M G PN+V Y+ L++ +C+ G N A E ++M
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
PN TY++L+ GF + G +EA ++ EM K G + Y+ LI G C GRV++A+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMV---EKGVLPDTITYSSLI 506
V M G+ PD V+YS+II G +D A EM+ E PD +TY+ L+
Sbjct: 488 MVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Query: 507 HGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLIN 542
GLC Q+ I+ A +L ML RG PD T T +N
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 204/382 (53%), Gaps = 19/382 (4%)
Query: 326 TYNTLLNGYCKEGNLHQALVLHAEMVRNGL----SPNVVTYTSLINSMCKSGNLNRAMEF 381
++N++LN EG H+ L + +V + + SPN +++ +I ++CK ++RA+E
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 382 FDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCT 441
F M R+ P+ TY TL++G + +DEA LL+EM G PS V YN LI G C
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 442 GGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTIT 501
G + ++ M KG P+ V+Y+T+I G +LDKA MV +P+ +T
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 502 YSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMI 561
Y +LI+GL +QRR T+A L M RG ++ Y+ LI+ EG +A+ L +M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 562 QKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQN 621
+KG P++V YSVL++GL ++ + EAK++L ++ +P+ Y
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTY-------------- 435
Query: 622 VAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMV 681
++L+KGF GL EA +V++ M + N+ Y ++I G VG V++A ++ KM+
Sbjct: 436 -SSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 682 RSGFVPHTVTIIVLVKALHTAG 703
G P TV ++K L G
Sbjct: 495 TIGIKPDTVAYSSIIKGLCGIG 516
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/403 (26%), Positives = 191/403 (47%), Gaps = 20/403 (4%)
Query: 361 TYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEM 420
T +S+I S SG+ + + ++ + E+++ + + + D+A L + M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 421 TKN-GFMPSIVTYNALIKGHCTGGRVEDAVG----VLHGMARKGLAPDVVSYSTIISGFS 475
S+ ++N+++ G + V++ ++P+ +S++ +I
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 476 RSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEF 535
+ + +D+A + R M E+ LPD TY +L+ GLC++ RI EA L EM S G SP
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258
Query: 536 TYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKL 595
Y LI+ C +GD+ + +L D M KG +P+ VTY+ LI+GL + + +A LL ++
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 596 FYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEA 655
+ +P+DV Y TLI G + +A R+ M +R + N+
Sbjct: 319 VSSKCIPNDVTYGTLIN---------------GLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 656 VYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENI 715
+Y ++I G K G ++A L++KM G P+ V VLV L G E +++ +
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 716 LRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ S L +A L++ K G + + V EM K G N
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 143/423 (33%), Positives = 240/423 (56%), Gaps = 5/423 (1%)
Query: 191 VIRSGRNNWVKFAEEVYNEMGKSRVSPNV-YTYNVLIRGFCGVGDLEMGLRFFSEMEKNN 249
V R G+N+ A V+ + + RV+P + + L+ + +G + ++ F K+
Sbjct: 145 VSRKGKNS----ASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHR 200
Query: 250 CLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETK 309
+ L+D KL + ++ G N+ +N+++N CKEG + + +
Sbjct: 201 FDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQ 260
Query: 310 GILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSM 369
+ +EI+++ L P V++NTL+NGYCK GNL + L +M ++ P+V TY++LIN++
Sbjct: 261 KVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL 320
Query: 370 CKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSI 429
CK ++ A FD+M R L PN+ +TTLI+G S++G +D +M G P I
Sbjct: 321 CKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDI 380
Query: 430 VTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
V YN L+ G C G + A ++ GM R+GL PD ++Y+T+I GF R +++ A + ++E
Sbjct: 381 VLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKE 440
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
M + G+ D + +S+L+ G+C++ R+ +A +EML G+ PD+ TYT +++A+C +GD
Sbjct: 441 MDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGD 500
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNT 609
+L EM G +P VVTY+VL+NGL K + A LL + VP D+ YNT
Sbjct: 501 AQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNT 560
Query: 610 LIE 612
L+E
Sbjct: 561 LLE 563
Score = 270 bits (689), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 274/521 (52%), Gaps = 25/521 (4%)
Query: 73 QTLTLKFLKWAQPQPFFTPKLKCLTLHILTKF----KLYKSAQTLAQNLAVDLPRDDGNF 128
Q F K+ QP F + T +L +F +++ AQ+L + + ++ +
Sbjct: 98 QRSIFAFFKFISSQPGF--RFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASS 155
Query: 129 VFSCLKE--TYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNA 186
VF L E +C ++D ++ +Y+ L I A+ L++ H F +
Sbjct: 156 VFISLVEMRVTPMC-----GFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGN 210
Query: 187 ILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEME 246
+LD +++ + Y E+ + NVY +N+L+ FC G++ + F E+
Sbjct: 211 LLDRMMKLNPTGTI---WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEIT 267
Query: 247 KNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLK 306
K + VV++NTLI+GYCK+G +D+ F+L M P++ +Y+ +IN LCKE ++
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 307 ETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLI 366
G+ +E+ ++GL+P++V + TL++G+ + G + + +M+ GL P++V Y +L+
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 367 NSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFM 426
N CK+G+L A D M R LRP++ TYTTLI+GF + G ++ A + EM +NG
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 427 PSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDT 486
V ++AL+ G C GRV DA L M R G+ PD V+Y+ ++ F + + F
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Query: 487 KREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCT 546
+EM G +P +TY+ L++GLC+ ++ A L ML+ G+ PD+ TY TL+ +
Sbjct: 508 LKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHR 567
Query: 547 EGDIPQALRLHDEMIQK---GFLPDVVTYSVLINGLNKQAR 584
+ + IQK G + D+ +Y ++N L++ ++
Sbjct: 568 HANSSK------RYIQKPEIGIVADLASYKSIVNELDRASK 602
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 203/417 (48%), Gaps = 15/417 (3%)
Query: 258 NTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISR 317
+ L+ Y LG I DA + R + + +++ + K G EI
Sbjct: 174 DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILD 233
Query: 318 KGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNR 377
G + +N L+N +CKEGN+ A + E+ + L P VV++ +LIN CK GNL+
Sbjct: 234 AGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDE 293
Query: 378 AMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIK 437
QM RP+ TY+ LIN + +D A+ L +EM K G +P+ V + LI
Sbjct: 294 GFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIH 353
Query: 438 GHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLP 497
GH G ++ M KGL PD+V Y+T+++GF ++ +L A + M+ +G+ P
Sbjct: 354 GHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRP 413
Query: 498 DTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLH 557
D ITY++LI G C + A E+ +EM G+ D ++ L+ C EG + A R
Sbjct: 414 DKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 558 DEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNI 617
EM++ G PD VTY+++++ K+ KLL ++ D VPS V YN
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYN--------- 524
Query: 618 EFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAY 674
LL G C G M AD + + ML +P++ Y+ ++ GH + N K Y
Sbjct: 525 ------VLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRY 575
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 176/347 (50%), Gaps = 15/347 (4%)
Query: 393 NEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVL 452
N + L+N F + G + +A ++ +E+TK P++V++N LI G+C G +++ +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 453 HGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQ 512
H M + PDV +YS +I+ + ++D A EM ++G++P+ + +++LIHG
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 513 RRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTY 572
I E +Q+MLS+G+ PD Y TL+N +C GD+ A + D MI++G PD +TY
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 573 SVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMK 632
+ LI+G + A + I + +N ++ +AL+ G C +
Sbjct: 419 TTLIDGFCRGGDVETALE---------------IRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 633 GLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTI 692
G + +A+R ML+ P++ Y +++ K G+ Q + L K+M G VP VT
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Query: 693 IVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGN 739
VL+ L G + +++ +L + D L+E +H+ N
Sbjct: 524 NVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 15/300 (5%)
Query: 459 GLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEA 518
G +V ++ +++ F + + A E+ ++ + P +++++LI+G C+ + E
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 519 CELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLING 578
L +M PD FTY+ LINA C E + A L DEM ++G +P+ V ++ LI+G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 579 LNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEA 638
++ K+ K+ P V+YNTL+ GFC G + A
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN---------------GFCKNGDLVAA 399
Query: 639 DRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKA 698
+ + M++R P++ Y +I G + G+V+ A ++ K+M ++G V LV
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459
Query: 699 LHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ G + + + +LR+ D ++++ K+G+ +L EM DG +P+
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 15/235 (6%)
Query: 521 LFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
+ E+L G + + + L+N +C EG+I A ++ DE+ ++ P VV+++ LING
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286
Query: 581 KQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADR 640
K E +L ++ + P Y +AL+ C + M+ A
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTY---------------SALINALCKENKMDGAHG 331
Query: 641 VFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALH 700
+F+ M +R +PN+ ++ +IHGHS+ G + + Y+KM+ G P V LV
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 701 TAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGL 755
G +++ ++R D L++ + G+++ L + EM ++G+
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 211/810 (26%), Positives = 354/810 (43%), Gaps = 133/810 (16%)
Query: 32 DAVIADKALTLLKRHPYQ----LNSLSSEFTPEAAFNLLLKTQSDQTLTLKFLKWA--QP 85
D V A +LLK ++ L SL S P A ++ +SD + ++F W
Sbjct: 38 DEVAAHDVASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHS 97
Query: 86 QPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDDGN-----FVFSCLKETY--- 137
F P K L ++ LY+ A + L + R + + F L+E +
Sbjct: 98 SYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFR 157
Query: 138 --HLCDST--SSSAVIDLVVKSYSH----------LNMIDKAVNIVNLAK------VHGF 177
+ C S+ S A +DL +Y + MID + L K F
Sbjct: 158 LNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217
Query: 178 MPGVLSYNAILDSVIRSG------RNNWVKFAEEVYNEMGKS-RVSPNVYTYNVLIRGFC 230
M +L +LDS I + R ++ A +V++ M K +PN +Y++LI G C
Sbjct: 218 MSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLC 277
Query: 231 GVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLI 290
VG LE +M + C + TY LI C G ID AF L +M +G +PN+
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 291 SYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNL---------- 340
+Y V+I+GLC++G+++E G+ ++ + + P +TYN L+NGYCK+G +
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 341 -------------------------HQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNL 375
++A+ L M+ NGLSP++V+Y LI+ +C+ G++
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 376 NRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNAL 435
N A + M+ ++ P+ T+T +IN F + G D A L M + G VT L
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517
Query: 436 IKGHCTGGRVEDAVGVLHGMARK-----------------------------------GL 460
I G C G+ DA+ +L + + GL
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 461 APDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACE 520
P VV+Y+T++ G RS ++ +F M G LP+ Y+ +I+GLC+ R+ EA +
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637
Query: 521 LFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLN 580
L M G+SP+ TYT ++ Y G + +AL M+++G+ + YS L+ G
Sbjct: 638 LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Query: 581 KQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG------------ 628
+ ++ +ES SD+ C N E +V L G
Sbjct: 698 LSQKGIDNS--------EESTVSDIALRETDPECIN-ELISVVEQLGGCISGLCIFLVTR 748
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
C +G +E++ + + +L+R +A+ DII+ + K +L +++SGFVP
Sbjct: 749 LCKEGRTDESNDLVQNVLERGVFLEKAM-DIIMESYCSKKKHTKCMELITLVLKSGFVPS 807
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRS 718
+ ++++ L G E +++ +L S
Sbjct: 808 FKSFCLVIQGLKKEGDAERARELVMELLTS 837
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/545 (27%), Positives = 264/545 (48%), Gaps = 92/545 (16%)
Query: 145 SSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAE 204
S+ +++K+ +IDKA N+ + G P V +Y ++D + R G+ ++ A
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK---IEEAN 356
Query: 205 EVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGY 264
V +M K R+ P+V TYN LI G+C G + + MEK C NV T+N L++G
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 265 CKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDE 324
C++G+ A LL+ M G+ P+++SYNV+I+GLC+EG + +L+ ++ + PD
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 325 VTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQ 384
+T+ ++N +CK+G A M+R G+S + VT T+LI+ +CK G A+ +
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 385 M-----------------------HVRE------------LRPNEKTYTTLINGFSQHGF 409
+ V+E L P+ TYTTL++G + G
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 410 LDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
+ ++R+L M +G +P++ Y +I G C GRVE+A +L M G++P+ V+Y+
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG--------------------- 508
++ G+ + +LD+A +T R MVE+G + YSSL+ G
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIAL 716
Query: 509 --------------------------------LCEQRRITEACELFQEMLSRGMSPDEFT 536
LC++ R E+ +L Q +L RG+ ++
Sbjct: 717 RETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-A 775
Query: 537 YTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLF 596
++ +YC++ + + L +++ GF+P ++ ++I GL K+ A++L+++L
Sbjct: 776 MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELL 835
Query: 597 YDESV 601
V
Sbjct: 836 TSNGV 840
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 183/400 (45%), Gaps = 16/400 (4%)
Query: 354 GLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEA 413
G N Y+SL+ S+ K A + +M Y T++N ++G+ + A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 414 YRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARK-GLAPDVVSYSTIIS 472
++++ K GF+ +L+ G C G + DA+ V M+++ AP+ VSYS +I
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 473 GFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSP 532
G L++AF K +M EKG P T TY+ LI LC++ I +A LF EM+ RG P
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 533 DEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLL 592
+ TYT LI+ C +G I +A + +M++ P V+TY+ LING K R + A +LL
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 593 LKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMP 652
+ P+ +N L+E G C G +A + + ML P
Sbjct: 395 TVMEKRACKPNVRTFNELME---------------GLCRVGKPYKAVHLLKRMLDNGLSP 439
Query: 653 NEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVI 712
+ Y+++I G + G++ AY L M P +T ++ A G + S +
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 713 ENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAK 752
+LR D L++ K G L +L + K
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVK 539
Score = 73.2 bits (178), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 124/287 (43%), Gaps = 59/287 (20%)
Query: 162 IDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYT 221
I + I+ L K+ G +P V Y I++ + + GR V+ AE++ + M S VSPN T
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGR---VEEAEKLLSAMQDSGVSPNHVT 653
Query: 222 YNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYC--KLGRIDDAFKLLRD 279
Y V+++G+ G L+ L M + N Y++L+ G+ + G + + D
Sbjct: 654 YTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSD 713
Query: 280 MGLKGIEPNLISYNV----------------IINGLCKEGRLKET---------KGILNE 314
+ L+ +P I+ + ++ LCKEGR E+ +G+ E
Sbjct: 714 IALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLE 773
Query: 315 -------------------------ISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAE 349
+ + G VP ++ ++ G KEG+ +A L E
Sbjct: 774 KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVME 833
Query: 350 MV-RNGL--SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPN 393
++ NG+ V+TY + ++G+ + ++ DQ+H RE RP
Sbjct: 834 LLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRE-RPT 879
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 557 HDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTN 616
+ M GF+ ++ Y ++N L K T A+ +F + + + ++ I
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAE-----MFMSKILKIGFVLDSHIGT--- 234
Query: 617 IEFQNVAALLKGFCMKGLMNEADRVFELMLQR-NHMPNEAVYDIIIHGHSKVGNVQKAYD 675
+LL GFC + +A +VF++M + PN Y I+IHG +VG +++A+
Sbjct: 235 -------SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFG 287
Query: 676 LYKKMVRSGFVPHTVTIIVLVKALHTAGM-NEELSQVIENILRSCRLSDAELAKVLVEIN 734
L +M G P T T VL+KAL G+ ++ + E I R C+ + VL++
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK-PNVHTYTVLIDGL 346
Query: 735 HKEGNMDAVLNVLTEMAKDGLLPN 758
++G ++ V +M KD + P+
Sbjct: 347 CRDGKIEEANGVCRKMVKDRIFPS 370
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 18/277 (6%)
Query: 483 AFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLIN 542
FD RE+ G + YSSL+ L + A ++ M + G Y T++N
Sbjct: 146 CFDELREVF--GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVN 203
Query: 543 AYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESV- 601
A C G A ++++ GF+ D + L+ G + +A K+ + + +
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCA 263
Query: 602 PSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIII 661
P+ V Y+ LI G C G + EA + + M ++ P+ Y ++I
Sbjct: 264 PNSVSYSILIH---------------GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 662 HGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRL 721
G + KA++L+ +M+ G P+ T VL+ L G EE + V +++
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 722 SDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
L+ K+G + +LT M K PN
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPN 405
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/549 (28%), Positives = 287/549 (52%), Gaps = 18/549 (3%)
Query: 143 TSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKF 202
+S S ++++ H +D A+ + +P + +N +L ++ + + + V
Sbjct: 47 SSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 106
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
E +G +S N+YTYN+LI FC + + L +M K ++VT ++L++
Sbjct: 107 LGEKMQRLG---ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
GYC RI DA L+ M G P+ I++ +I+GL + E +++ + ++G P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+ VTY ++NG CK G++ A L +M + NVV Y+++I+S+CK + + A+ F
Sbjct: 224 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 283
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+M + +RPN TY++LI+ + +A RLL++M + P++VT+NALI
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKE 343
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
G++ +A + M ++ + PD+ +YS++I+GF LD+A M+ K P+ +TY
Sbjct: 344 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
++LI+G C+ +RI E ELF+EM RG+ + TYTTLI+ + D A + +M+
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
G P+++TY+ L++GL K + +A + L + P+ YN +IE
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE---------- 513
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
G C G + + +F + + P+ +Y+ +I G + G ++A L++KM
Sbjct: 514 -----GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRE 568
Query: 683 SGFVPHTVT 691
G +P + T
Sbjct: 569 DGPLPDSGT 577
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/511 (29%), Positives = 256/511 (50%), Gaps = 22/511 (4%)
Query: 235 LEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNV 294
L+ + F M K+ L ++ +N L+ K+ + D L M GI NL +YN+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 295 IINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
+IN C+ ++ +L ++ + G P VT ++LLNGYC + A+ L +MV G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 355 LSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAY 414
P+ +T+T+LI+ + + A+ D+M R +PN TY ++NG + G +D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 415 RLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGF 474
LLN+M ++V Y+ +I C +DA+ + M KG+ P+V++YS++IS
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 475 SRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDE 534
+ A +M+E+ + P+ +T+++LI ++ ++ EA +L+ EM+ R + PD
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 365
Query: 535 FTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLK 594
FTY++LIN +C + +A + + MI K P+VVTY+ LING K R E +L +
Sbjct: 366 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE 425
Query: 595 LFYDESVPSDVIYNTLI------ENCTNIE--FQNVAA------------LLKGFCMKGL 634
+ V + V Y TLI +C N + F+ + + LL G C G
Sbjct: 426 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Query: 635 MNEADRVFELMLQRNHM-PNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTII 693
+ +A VFE LQR+ M P Y+I+I G K G V+ +DL+ + G P +
Sbjct: 486 LEKAMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYN 544
Query: 694 VLVKALHTAGMNEELSQVIENILRSCRLSDA 724
++ G+ EE + + L D+
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 247/490 (50%), Gaps = 15/490 (3%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L M P++ +N +++ + K + + ++ R G+ + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
L+N +C+ + AL L +M++ G P++VT +SL+N C ++ A+ DQM
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
RP+ T+TTLI+G H EA L++ M + G P++VTY ++ G C G ++ A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+L+ M + +VV YST+I + + D A + EM KGV P+ ITYSSLI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC R ++A L +M+ R ++P+ T+ LI+A+ EG + +A +L+DEMI++ PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
+ TYS LING R EAK + + + P+ V YNTLI G
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIN---------------G 409
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
FC ++E +F M QR + N Y +IHG + + A ++K+MV G P+
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 689 TVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLT 748
+T L+ L G E+ V E + RS +++E K G ++ ++
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 749 EMAKDGLLPN 758
++ G+ P+
Sbjct: 530 SLSLKGVKPD 539
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 177/398 (44%), Gaps = 15/398 (3%)
Query: 362 YTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMT 421
Y ++ + S L+ A+ F M P+ + L++ ++ D L +M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 422 KNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELD 481
+ G ++ TYN LI C ++ A+ +L M + G P +V+ S++++G+ + +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 482 KAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLI 541
A +MVE G PDTIT+++LIHGL + +EA L M+ RG P+ TY ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 542 NAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESV 601
N C GDI A L ++M +VV YS +I+ L K +A L ++
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 602 PSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIII 661
P+ + Y++LI N E ++A R+ M++R PN ++ +I
Sbjct: 293 PNVITYSSLISCLCNYE---------------RWSDASRLLSDMIERKINPNVVTFNALI 337
Query: 662 HGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRL 721
K G + +A LY +M++ P T L+ +E + E ++
Sbjct: 338 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 397
Query: 722 SDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
+ L+ K +D + + EM++ GL+ N+
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 238/417 (57%), Gaps = 3/417 (0%)
Query: 179 PGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMG 238
P ++ +N +L ++++ + + V + +G + ++YT+N++I FC + +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG---IRNDLYTFNIVINCFCCCFQVSLA 139
Query: 239 LRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIING 298
L +M K + VT +L++G+C+ R+ DA L+ M G +P++++YN II+
Sbjct: 140 LSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 299 LCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPN 358
LCK R+ + EI RKG+ P+ VTY L+NG C A L ++M++ ++PN
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 359 VVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLN 418
V+TY++L+++ K+G + A E F++M + P+ TY++LING H +DEA ++ +
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 419 EMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQ 478
M G + +V+YN LI G C RVED + + M+++GL + V+Y+T+I GF ++
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 479 ELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYT 538
++DKA + +M G+ PD TY+ L+ GLC+ + +A +F++M R M D TYT
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 539 TLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKL 595
T+I C G + +A L + KG PD+VTY+ +++GL + E + L K+
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 255/485 (52%), Gaps = 23/485 (4%)
Query: 203 AEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLID 262
A +++++M KSR P++ +N L+ + ++ + +ME ++ T+N +I+
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
+C ++ A +L M G EP+ ++ ++NG C+ R+ + +++++ G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
D V YN +++ CK ++ A E+ R G+ PNVVTYT+L+N +C S + A
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
M +++ PN TY+ L++ F ++G + EA L EM + P IVTY++LI G C
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
R+++A + M KG DVVSY+T+I+GF +++ ++ REM ++G++ +T+TY
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
++LI G + + +A E F +M G+SPD +TY L+ C G++ +AL + ++M +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQK 428
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNV 622
+ D+VTY+ +I G+ K + EA L L P V Y T
Sbjct: 429 REMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT------------- 475
Query: 623 AALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
++ G C KGL++E + ++ M Q M N+ G++ + +L KKM+
Sbjct: 476 --MMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL--------SDGDITLSAELIKKMLS 525
Query: 683 SGFVP 687
G+ P
Sbjct: 526 CGYAP 530
Score = 239 bits (609), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 211/374 (56%)
Query: 200 VKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNT 259
V A + +M K P+ T L+ GFC + + +M + ++V YN
Sbjct: 136 VSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNA 195
Query: 260 LIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKG 319
+ID CK R++DAF +++ KGI PN+++Y ++NGLC R + +L+++ +K
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 320 LVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAM 379
+ P+ +TY+ LL+ + K G + +A L EMVR + P++VTY+SLIN +C ++ A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 380 EFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGH 439
+ FD M + + +Y TLINGF + +++ +L EM++ G + + VTYN LI+G
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 440 CTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDT 499
G V+ A M G++PD+ +Y+ ++ G + EL+KA +M ++ + D
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 500 ITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDE 559
+TY+++I G+C+ ++ EA LF + +G+ PD TYTT+++ CT+G + + L+ +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 560 MIQKGFLPDVVTYS 573
M Q+G + + T S
Sbjct: 496 MKQEGLMKNDCTLS 509
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 234/464 (50%), Gaps = 21/464 (4%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
+++DA L DM P+++ +N +++ + K + + ++ G+ D T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
++N +C + AL + +M++ G P+ VT SL+N C+ ++ A+ D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+P+ Y +I+ + +++A+ E+ + G P++VTY AL+ G C R DA
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+L M +K + P+V++YS ++ F ++ ++ +A + EMV + PD +TYSSLI+G
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
LC RI EA ++F M+S+G D +Y TLIN +C + ++L EM Q+G + +
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKG 628
VTY+ LI G + +A++ ++ + P YN LL G
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI---------------LLGG 409
Query: 629 FCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPH 688
C G + +A +FE M +R + Y +I G K G V++A+ L+ + G P
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 689 TVTIIVLVKALHTAGMNEELSQVI-----ENILRS-CRLSDAEL 726
VT ++ L T G+ E+ + E ++++ C LSD ++
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDI 513
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 166/352 (47%), Gaps = 21/352 (5%)
Query: 410 LDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
L++A L ++M K+ PSIV +N L+ + + + + M G+ D+ +++
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
+I+ F ++ A +M++ G PD +T SL++G C + R+++A L +M+ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
PD Y +I++ C + A E+ +KG P+VVTY+ L+NGL +R +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRN 649
+LL + + P+ + Y +ALL F G + EA +FE M++ +
Sbjct: 246 RLLSDMIKKKITPNVITY---------------SALLDAFVKNGKVLEAKELFEEMVRMS 290
Query: 650 HMPNEAVYDIIIHG---HSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNE 706
P+ Y +I+G H ++ + +DL MV G + V+ L+ A E
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDL---MVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 707 ELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ ++ + + +S+ L++ + G++D ++M G+ P+
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 138/304 (45%), Gaps = 20/304 (6%)
Query: 476 RSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEF 535
R +L+ A D +MV+ P + ++ L+ + + ++ L ++M G+ D +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 536 TYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKL 595
T+ +IN +C + AL + +M++ G+ PD VT L+NG ++ R +A L+ K+
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 596 FYDESVPSDVIYNTLIENCTNIEFQNVA--------------------ALLKGFCMKGLM 635
P V YN +I++ + N A AL+ G C
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 636 NEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVL 695
++A R+ M+++ PN Y ++ K G V +A +L+++MVR P VT L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 696 VKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGL 755
+ L +E +Q+ + ++ L+D L+ K ++ + + EM++ GL
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 756 LPNS 759
+ N+
Sbjct: 362 VSNT 365
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 269 bits (687), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 201/779 (25%), Positives = 341/779 (43%), Gaps = 117/779 (15%)
Query: 5 PLSFWIPKMPIINLQIHRSLSTLSATADAVIADKALTLLKRHPYQLNSLSSEFTPEAAFN 64
P++ I K+ + I ++ S D AD+ + + P+ + +
Sbjct: 26 PITPRIKKLVSDTVSILKTQQNWSQILDDCFADEEVRFVDISPFVFDRIQ---------- 75
Query: 65 LLLKTQSDQTLTLKFLKWAQPQP---FFTPKLKCLT-LHILTKFKLYKSAQTLAQNLAVD 120
D + +K W + FF+ C + L +L +++++ + + NL
Sbjct: 76 -------DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNL--- 125
Query: 121 LPRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVN-LAKVHGFMP 179
R++ +K T+ + V+ +Y+ + KAV I + + +++ +P
Sbjct: 126 --RNEN------VKLTHE---------ALSHVLHAYAESGSLSKAVEIYDYVVELYDSVP 168
Query: 180 GVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGL 239
V++ N++L +++S R + A +VY+EM S + Y+ +L++G C G +E+G
Sbjct: 169 DVIACNSLLSLLVKSRR---LGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGR 225
Query: 240 RFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGL 299
+ C+ N+V YNT+I GYCKLG I++A+ + +++ LKG P L ++ +ING
Sbjct: 226 KLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF 285
Query: 300 CKEGRLKETKGILNEISRKGL-----------------------------------VPDE 324
CKEG + +L+E+ +GL PD
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345
Query: 325 VTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQ 384
TYN L+N CKEG A+ E + GL PN ++Y LI + CKS + A + Q
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 385 MHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGR 444
M R +P+ TY LI+G G +D+A + ++ G P YN L+ G C GR
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 445 VEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGV--------- 495
A + M + + PD Y+T+I GF RS + D+A VEKGV
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 496 --------------------------LPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
+PD TYS++I G +Q+ + A ++F+ M
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
P+ TYT+LIN +C +GD A EM + +P+VVTY+ LI L K++ T+E
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 590 KLLLKLFY-DESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQR 648
+L ++ VP++V +N L++ V A G G + F M
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG-SNHGQSSLFSEFFHRMKSD 704
Query: 649 NHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEE 707
+ A Y+ + G V+ A KMV+ GF P V+ ++ G +++
Sbjct: 705 GWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 233/458 (50%), Gaps = 24/458 (5%)
Query: 150 DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
+++ Y H +D A +I + P V +YN +++ + + G+ + A +E
Sbjct: 315 NIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEGKK---EVAVGFLDE 370
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
K + PN +Y LI+ +C + ++ + +M + C ++VTY LI G G
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGH 430
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
+DDA + + +G+ P+ YN++++GLCK GR K + +E+ + ++PD Y T
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++G+ + G+ +A + + V G+ +VV + ++I C+SG L+ A+ ++M+
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
L P++ TY+T+I+G+ + + A ++ M KN P++VTY +LI G C G + A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSR-SQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
M + L P+VV+Y+T+I ++ S L+KA M+ +P+ +T++ L+ G
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Query: 509 LCEQ---RRITEA-----------CELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQAL 554
++ + + E E F M S G S Y + + C G + A
Sbjct: 671 FVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC 730
Query: 555 RLHDEMIQKGFLPDVVTYSVLINGL-----NKQARTME 587
D+M++KGF PD V+++ +++G +KQ R M+
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMD 768
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 137/573 (23%), Positives = 247/573 (43%), Gaps = 38/573 (6%)
Query: 196 RNNWVKFAEEVY--NEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFF---SEMEKNNC 250
+ NW + ++ + E+ +SP V+ + D+E+G++ F S +K+
Sbjct: 45 QQNWSQILDDCFADEEVRFVDISPFVFDR---------IQDVEIGVKLFDWLSSEKKDEF 95
Query: 251 LAN---VVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKE 307
+N ++ L+ Y I+D LR+ +K L + +++ + G L +
Sbjct: 96 FSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEAL---SHVLHAYAESGSLSK 152
Query: 308 TKGILNEISR-KGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLI 366
I + + VPD + N+LL+ K L A ++ EM G S + + L+
Sbjct: 153 AVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILV 212
Query: 367 NSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFM 426
MC G + + + + PN Y T+I G+ + G ++ AY + E+ GFM
Sbjct: 213 KGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFM 272
Query: 427 PSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISG-FSRSQELDKAFD 485
P++ T+ +I G C G + +L + +GL V + II + ++D A +
Sbjct: 273 PTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA-E 331
Query: 486 TKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYC 545
+ ++ PD TY+ LI+ LC++ + A E +G+ P+ +Y LI AYC
Sbjct: 332 SIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYC 391
Query: 546 TEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDV 605
+ A +L +M ++G PD+VTY +LI+GL +A + +KL P
Sbjct: 392 KSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAA 451
Query: 606 IYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHS 665
IYN L + G C G A +F ML RN +P+ VY +I G
Sbjct: 452 IYNML---------------MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 666 KVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAE 725
+ G+ +A ++ V G V ++K +GM +E + + + D
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 726 LAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+++ K+ +M + + M K+ PN
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPN 589
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 179/402 (44%), Gaps = 59/402 (14%)
Query: 363 TSLINSMCKSGNLNRAMEFFDQMHVRELR---PNEKTYTTLINGFSQHGFLDEAYRLLNE 419
+ ++++ +SG+L++A+E +D +V EL P+ +L++ + L +A ++ +E
Sbjct: 138 SHVLHAYAESGSLSKAVEIYD--YVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDE 195
Query: 420 MTKNGFMPSIVTYNA--LIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRS 477
M G S+ Y+ L+KG C G+VE ++ G KG P++V Y+TII G+ +
Sbjct: 196 MCDRG--DSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKL 253
Query: 478 QELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTY 537
+++ A+ +E+ KG +P T+ ++I+G C++ + L E+ RG+ +
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 538 TTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFY 597
+I+A G +I PDV TY++LIN L K E KK + F
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK-----EGKKEVAVGFL 368
Query: 598 DESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVY 657
DE+ +I N L + A L++ +C + A ++ M +R P+ Y
Sbjct: 369 DEASKKGLIPNNL----------SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 658 DIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILR 717
I+IHG G++ A ++ K++ G P +L+ L G
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG-------------- 464
Query: 718 SCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
R A+L + +EM +LP++
Sbjct: 465 --RFLPAKL-------------------LFSEMLDRNILPDA 485
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/473 (31%), Positives = 245/473 (51%), Gaps = 16/473 (3%)
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M + +P+V LI+GF + ++ +R +EK +V YN LI+G+CK+ R
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR 173
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
IDDA ++L M K P+ ++YN++I LC G+L +LN++ P +TY
Sbjct: 174 IDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L+ EG + +AL L EM+ GL P++ TY ++I MCK G ++RA E + ++
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
P+ +Y L+ G +E +L+ +M P++VTY+ LI C G++E+A+
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 450 GVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGL 509
+L M KGL PD SY +I+ F R LD A + M+ G LPD + Y++++ L
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 510 CEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDV 569
C+ + +A E+F ++ G SP+ +Y T+ +A + GD +AL + EM+ G PD
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Query: 570 VTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGF 629
+TY+ +I+ L ++ EA +LL+ + E PS V YN +L GF
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI---------------VLLGF 518
Query: 630 CMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVR 682
C + +A V E M+ PNE Y ++I G G +A +L +VR
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/440 (31%), Positives = 227/440 (51%), Gaps = 4/440 (0%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++K + L I KAV ++ + + G P V +YNA+++ + R + A V + M
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNR---IDDATRVLDRMR 185
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
SP+ TYN++I C G L++ L+ +++ +NC V+TY LI+ G +D
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A KL+ +M +G++P++ +YN II G+CKEG + ++ + KG PD ++YN LL
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL 305
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+G + L +M PNVVTY+ LI ++C+ G + AM M + L
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P+ +Y LI F + G LD A L M +G +P IV YN ++ C G+ + A+ +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
+ G +P+ SY+T+ S S + +A EM+ G+ PD ITY+S+I LC
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
+ + EA EL +M S P TY ++ +C I A+ + + M+ G P+ T
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545
Query: 572 YSVLINGLNKQARTMEAKKL 591
Y+VLI G+ EA +L
Sbjct: 546 YTVLIEGIGFAGYRAEAMEL 565
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 244/488 (50%), Gaps = 16/488 (3%)
Query: 230 CGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNL 289
C G+ L M + +V+ LI G+ L I A +++ + G +P++
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 290 ISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAE 349
+YN +ING CK R+ + +L+ + K PD VTYN ++ C G L AL + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 350 MVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGF 409
++ + P V+TYT LI + G ++ A++ D+M R L+P+ TY T+I G + G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 410 LDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYST 469
+D A+ ++ + G P +++YN L++ G+ E+ ++ M + P+VV+YS
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 470 IISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRG 529
+I+ R ++++A + + M EKG+ PD +Y LI C + R+ A E + M+S G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 530 MSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAK 589
PD Y T++ C G QAL + ++ + G P+ +Y+ + + L + A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 590 KLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRN 649
++L++ + P ++ YN++I +C C +G+++EA + M
Sbjct: 459 HMILEMMSNGIDPDEITYNSMI-SC--------------LCREGMVDEAFELLVDMRSCE 503
Query: 650 HMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELS 709
P+ Y+I++ G K ++ A ++ + MV +G P+ T VL++ + AG E
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 710 QVIENILR 717
++ +++R
Sbjct: 564 ELANDLVR 571
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 204/410 (49%), Gaps = 38/410 (9%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++ + +N ID A +++ + F P ++YN ++ S+ G+ + A +V N++
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK---LDLALKVLNQLL 220
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
P V TY +LI G ++ L+ EM ++ TYNT+I G CK G +D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 272 DAFKLLRDMGLKGIEPNLISYN-----------------------------------VII 296
AF+++R++ LKG EP++ISYN ++I
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 297 NGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLS 356
LC++G+++E +L + KGL PD +Y+ L+ +C+EG L A+ M+ +G
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 357 PNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRL 416
P++V Y +++ ++CK+G ++A+E F ++ PN +Y T+ + G A +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 417 LNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSR 476
+ EM NG P +TYN++I C G V++A +L M P VV+Y+ ++ GF +
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCK 520
Query: 477 SQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEML 526
+ ++ A + MV G P+ TY+ LI G+ EA EL +++
Sbjct: 521 AHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 170/376 (45%), Gaps = 16/376 (4%)
Query: 384 QMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGG 443
Q H + L + + + + G E+ LL M + G+ P ++ LIKG T
Sbjct: 79 QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138
Query: 444 RVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYS 503
+ AV V+ + + G PDV +Y+ +I+GF + +D A M K PDT+TY+
Sbjct: 139 NIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 197
Query: 504 SLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQK 563
+I LC + ++ A ++ ++LS P TYT LI A EG + +AL+L DEM+ +
Sbjct: 198 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 257
Query: 564 GFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA 623
G PD+ TY+ +I G+ K+ A +++ L P + YN L+
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLR----------- 306
Query: 624 ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRS 683
ALL +G E +++ M PN Y I+I + G +++A +L K M
Sbjct: 307 ALLN----QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Query: 684 GFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAV 743
G P + L+ A G + + +E ++ L D ++ K G D
Sbjct: 363 GLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQA 422
Query: 744 LNVLTEMAKDGLLPNS 759
L + ++ + G PNS
Sbjct: 423 LEIFGKLGEVGCSPNS 438
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/625 (28%), Positives = 305/625 (48%), Gaps = 26/625 (4%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ ++ +D A+++++ K ++ YN +DS + G+ V A + ++E+
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK---VDMAWKFFHEIE 265
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ + P+ TY +I C L+ + F +EKN + YNT+I GY G+ D
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
+A+ LL KG P++I+YN I+ L K G++ E + E+ +K P+ TYN L+
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILI 384
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+ C+ G L A L M + GL PNV T +++ +CKS L+ A F++M +
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
P+E T+ +LI+G + G +D+AY++ +M + + + Y +LIK GR ED +
Sbjct: 445 PDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
M + +PD+ +T + ++ E +K E+ + +PD +YS LIHGL +
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
E ELF M +G D Y +I+ +C G + +A +L +EM KGF P VVT
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 572 YSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAAL-LKGFC 630
Y +I+GL K R EA L + + VIY++LI+ + + A L L+
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 631 MKGL-------------------MNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQ 671
KGL +NEA F+ M + PN+ Y I+I+G KV
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 672 KAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLV 731
KA+ +++M + G P T++ ++ L AG E + + + + D+ ++
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMI 804
Query: 732 E-INHKEGNMDAVLNVLTEMAKDGL 755
E +++ MDA ++ E + GL
Sbjct: 805 EGLSNGNRAMDA-FSLFEETRRRGL 828
Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/615 (27%), Positives = 295/615 (47%), Gaps = 65/615 (10%)
Query: 141 DSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWV 200
D + +++I ++ K+ N +D+AV + + + +P +YN ++ +G
Sbjct: 272 DEVTYTSMIGVLCKA----NRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAG----- 322
Query: 201 KFAEEVYNEMGKSRVS---PNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTY 257
KF +E Y+ + + R P+V YN ++ +G ++ L+ F EM+K+ N+ TY
Sbjct: 323 KF-DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTY 380
Query: 258 NTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISR 317
N LID C+ G++D AF+L M G+ PN+ + N++++ LCK +L E + E+
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 318 KGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLI----------- 366
K PDE+T+ +L++G K G + A ++ +M+ + N + YTSLI
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 367 ------------------------NSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLIN 402
+ M K+G + F+++ R P+ ++Y+ LI+
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 403 GFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAP 462
G + GF +E Y L M + G + YN +I G C G+V A +L M KG P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 463 DVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELF 522
VV+Y ++I G ++ LD+A+ E K + + + YSSLI G + RI EA +
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 523 QEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQ 582
+E++ +G++P+ +T+ +L++A +I +AL M + P+ VTY +LINGL K
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 583 ARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVF 642
+ +A ++ PS + Y T+I G G + EA +F
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMI---------------SGLAKAGNIAEAGALF 785
Query: 643 ELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTA 702
+ +P+ A Y+ +I G S A+ L+++ R G H T +VL+ LH
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKN 845
Query: 703 GMNEELSQVIENILR 717
E+ + ++ +LR
Sbjct: 846 DCLEQ-AAIVGAVLR 859
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 163/598 (27%), Positives = 276/598 (46%), Gaps = 28/598 (4%)
Query: 183 SYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFF 242
SYN++L + R RN +++ EM + P+V T ++ G L G
Sbjct: 100 SYNSLLLVMARC-RN--FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVV 156
Query: 243 SEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKE 302
M K Y TLI + + D L + M G EP + + +I G KE
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 303 GRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTY 362
GR+ +L+E+ L D V YN ++ + K G + A E+ NGL P+ VTY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 363 TSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTK 422
TS+I +CK+ L+ A+E F+ + P Y T+I G+ G DEAY LL
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 423 NGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDK 482
G +PS++ YN ++ G+V++A+ V M +K AP++ +Y+ +I R+ +LD
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 483 AFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLIN 542
AF+ + M + G+ P+ T + ++ LC+ +++ EAC +F+EM + +PDE T+ +LI+
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 543 AYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVP 602
G + A +++++M+ + + Y+ LI R + K+ + P
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 603 SDVIYNTLIENCT---------NIEFQNVAA------------LLKGFCMKGLMNEADRV 641
+ NT ++ C F+ + A L+ G G NE +
Sbjct: 516 DLQLLNTYMD-CMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL 574
Query: 642 FELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHT 701
F M ++ + + Y+I+I G K G V KAY L ++M GF P VT ++ L
Sbjct: 575 FYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Query: 702 AGMNEELSQVIENILRSCRLS-DAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+E + E +S R+ + + L++ K G +D +L E+ + GL PN
Sbjct: 635 IDRLDEAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPN 691
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 205/454 (45%), Gaps = 21/454 (4%)
Query: 326 TYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQM 385
+YN+LL + N + EM G P+V T ++ K+ L + M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 386 HVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRV 445
+ RP YTTLI FS D L +M + G+ P++ + LI+G GRV
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 446 EDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSL 505
+ A+ +L M L D+V Y+ I F + ++D A+ E+ G+ PD +TY+S+
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 506 IHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGF 565
I LC+ R+ EA E+F+ + P + Y T+I Y + G +A L + KG
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 566 LPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIEN-C------TNIE 618
+P V+ Y+ ++ L K + EA K+ ++ D + P+ YN LI+ C T E
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 619 FQN-------------VAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHS 665
++ V ++ C ++EA +FE M + P+E + +I G
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 666 KVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAE 725
KVG V AY +Y+KM+ S +++ L+K G E+ ++ ++++ D +
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 726 LAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
L ++ K G + + E+ +P++
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 182/407 (44%), Gaps = 22/407 (5%)
Query: 374 NLNRAMEFFDQMHVR-ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTY 432
++NRA+E+F R EL ++Y +L+ ++ D ++L EM+ GF PS+ T
Sbjct: 77 DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTC 136
Query: 433 NALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE 492
++ G ++ + V+ M + P +Y+T+I FS D ++M E
Sbjct: 137 IEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE 196
Query: 493 KGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQ 552
G P +++LI G ++ R+ A L EM S + D Y I+++ G +
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 553 ALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
A + E+ G PD VTY+ +I L K R EA ++ L + VP YNT+I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 613 NCTNI-EFQNVAALL-----KG------------FCMK--GLMNEADRVFELMLQRNHMP 652
+ +F +LL KG C++ G ++EA +VFE M +++ P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAP 375
Query: 653 NEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVI 712
N + Y+I+I + G + A++L M ++G P+ T+ ++V L + +E +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 713 ENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPNS 759
E + D L++ K G +D V +M NS
Sbjct: 436 EEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 103/228 (45%), Gaps = 9/228 (3%)
Query: 133 LKETYHLCDSTSSSAV-IDLVVKS-----YSHLNMIDKAVNIVNLAKVHGFMPGVLSYNA 186
L E Y L + S + +++V+ S + + ID+A I+ G P + ++N+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 187 ILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEME 246
+LD+++++ N A + M + + +PN TY +LI G C V F+ EM+
Sbjct: 698 LLDALVKAEEINE---ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 247 KNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLK 306
K + ++Y T+I G K G I +A L G P+ YN +I GL R
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 307 ETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
+ + E R+GL T LL+ K L QA ++ A + G
Sbjct: 815 DAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETG 862
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 262 bits (669), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 238/427 (55%), Gaps = 3/427 (0%)
Query: 178 MPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEM 237
+P + ++ +L ++ + + + V + E +G + N+ T N+L+ FC L +
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG---IPHNLCTCNILLNCFCRCSQLSL 134
Query: 238 GLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIIN 297
L F +M K ++VT+ +L++G+C+ R+ DA + M G +PN++ YN II+
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 298 GLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSP 357
GLCK ++ +LN + + G+ PD VTYN+L++G C G A + + M + + P
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYP 254
Query: 358 NVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLL 417
+V T+ +LI++ K G ++ A EF+++M R L P+ TY+ LI G + LDEA +
Sbjct: 255 DVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 418 NEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRS 477
M G P +VTY+ LI G+C +VE + + M+++G+ + V+Y+ +I G+ R+
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 478 QELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTY 537
+L+ A + R MV GV P+ ITY+ L+HGLC+ +I +A + +M GM D TY
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 538 TTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFY 597
+I C G++ A ++ + +G +PD+ TY+ ++ GL K+ EA L K+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 598 DESVPSD 604
D +P++
Sbjct: 495 DGILPNE 501
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 239/479 (49%), Gaps = 15/479 (3%)
Query: 214 RVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDA 273
R N Y ++R L+ L F M + L ++ ++ L+ K+ + D
Sbjct: 41 RAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVV 100
Query: 274 FKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNG 333
L M + GI NL + N+++N C+ +L L ++ + G P VT+ +LLNG
Sbjct: 101 IYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG 160
Query: 334 YCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPN 393
+C+ ++ AL + +MV G PNVV Y ++I+ +CKS ++ A++ ++M + P+
Sbjct: 161 FCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 394 EKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLH 453
TY +LI+G G +A R+++ MTK P + T+NALI GRV +A
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYE 280
Query: 454 GMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQR 513
M R+ L PD+V+YS +I G LD+A + MV KG PD +TYS LI+G C+ +
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 514 RITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYS 573
++ +LF EM RG+ + TYT LI YC G + A + M+ G P+++TY+
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 574 VLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKG 633
VL++GL + +A +L + + V YN +I +G C G
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII---------------RGMCKAG 445
Query: 634 LMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTI 692
+ +A ++ + + MP+ Y ++ G K G ++A L++KM G +P+ +
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 190/348 (54%), Gaps = 16/348 (4%)
Query: 154 KSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKS 213
+ Y L M D+ V + G+ P V+ YN I+D + +S + V A ++ N M K
Sbjct: 166 RVYDALYMFDQMVGM-------GYKPNVVIYNTIIDGLCKSKQ---VDNALDLLNRMEKD 215
Query: 214 RVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDA 273
+ P+V TYN LI G C G R S M K +V T+N LID K GR+ +A
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 274 FKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNG 333
+ +M + ++P++++Y+++I GLC RL E + + + KG PD VTY+ L+NG
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 334 YCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPN 393
YCK + + L EM + G+ N VTYT LI C++G LN A E F +M + PN
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPN 395
Query: 394 EKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLH 453
TY L++G +G +++A +L +M KNG IVTYN +I+G C G V DA +
Sbjct: 396 IITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYC 455
Query: 454 GMARKGLAPDVVSYSTIISGFSRS---QELDKAFDTKREMVEKGVLPD 498
+ +GL PD+ +Y+T++ G + +E D F R+M E G+LP+
Sbjct: 456 SLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF---RKMKEDGILPN 500
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 216/438 (49%), Gaps = 15/438 (3%)
Query: 321 VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAME 380
+P ++ LL+ K + L +M G+ N+ T L+N C+ L+ A+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
F +M P+ T+ +L+NGF + + +A + ++M G+ P++V YN +I G C
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
+V++A+ +L+ M + G+ PDVV+Y+++ISG S A M ++ + PD
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 501 TYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEM 560
T+++LI ++ R++EA E ++EM+ R + PD TY+ LI C + +A + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 561 IQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQ 620
+ KG PDVVTYS+LING K + KL ++ V + V Y LI+
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ-------- 369
Query: 621 NVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKM 680
G+C G +N A+ +F M+ PN Y++++HG G ++KA + M
Sbjct: 370 -------GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 681 VRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNM 740
++G VT ++++ + AG + + ++ + D ++ +K+G
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 741 DAVLNVLTEMAKDGLLPN 758
+ +M +DG+LPN
Sbjct: 483 READALFRKMKEDGILPN 500
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 40/317 (12%)
Query: 146 SAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNW------ 199
+ +ID + KS +D A++++N + G P V++YN+++ + SGR W
Sbjct: 190 NTIIDGLCKS----KQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR--WSDATRM 243
Query: 200 ----------------------------VKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCG 231
V AEE Y EM + + P++ TY++LI G C
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 232 VGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLIS 291
L+ F M C +VVTY+ LI+GYCK +++ KL +M +G+ N ++
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 292 YNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMV 351
Y ++I G C+ G+L + I + G+ P+ +TYN LL+G C G + +ALV+ A+M
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 352 RNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLD 411
+NG+ ++VTY +I MCK+G + A + + ++ + L P+ TYTT++ G + G
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 412 EAYRLLNEMTKNGFMPS 428
EA L +M ++G +P+
Sbjct: 484 EADALFRKMKEDGILPN 500
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 175/388 (45%), Gaps = 20/388 (5%)
Query: 388 RELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVED 447
R N Y ++ + LD++ L M + +PSI ++ L+ + +
Sbjct: 40 RRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDV 99
Query: 448 AVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIH 507
+ + M G+ ++ + + +++ F R +L A +M++ G P +T+ SL++
Sbjct: 100 VIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLN 159
Query: 508 GLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLP 567
G C R+ +A +F +M+ G P+ Y T+I+ C + AL L + M + G P
Sbjct: 160 GFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGP 219
Query: 568 DVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCT------------ 615
DVVTY+ LI+GL R +A +++ + E P +N LI+ C
Sbjct: 220 DVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 616 --------NIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKV 667
+ + + L+ G CM ++EA+ +F M+ + P+ Y I+I+G+ K
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKS 339
Query: 668 GNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELA 727
V+ L+ +M + G V +TVT +L++ AG ++ ++ +
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Query: 728 KVLVEINHKEGNMDAVLNVLTEMAKDGL 755
VL+ G ++ L +L +M K+G+
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKNGM 427
Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 111/292 (38%), Gaps = 50/292 (17%)
Query: 467 YSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEML 526
Y ++ R +LD + D MV+ LP +S L+ + + ++ L+++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 527 SRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTM 586
G+ + T L+N +C + AL +MI+ G P +VT+
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTF-------------- 154
Query: 587 EAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELML 646
+LL GFC + +A +F+ M+
Sbjct: 155 ------------------------------------GSLLNGFCRGDRVYDALYMFDQMV 178
Query: 647 QRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNE 706
+ PN +Y+ II G K V A DL +M + G P VT L+ L ++G
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 707 ELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ ++++ + + D L++ KEG + EM + L P+
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 256/480 (53%), Gaps = 9/480 (1%)
Query: 150 DLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNE 209
++V+K M++KA + HG MP V+++N +LDS ++G ++ ++++ E
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGD---LERVDKIWLE 263
Query: 210 MGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGR 269
M + + + TYN+LI GF G +E RF +M ++ ++N LI+GYCK G
Sbjct: 264 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL 323
Query: 270 IDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNT 329
DDA+ + +M GI P +YN+ I LC GR+ + + +L+ ++ PD V+YNT
Sbjct: 324 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNT 379
Query: 330 LLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRE 389
L++GY K G +A +L ++ + P++VTY +LI+ +C+SGNL A ++M +
Sbjct: 380 LMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL 439
Query: 390 LRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAV 449
+ P+ TYTTL+ GF ++G L A + +EM + G P Y G G + A
Sbjct: 440 IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAF 499
Query: 450 GVLHGM-ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ M A APD+ Y+ I G + L KA + +R++ G++PD +TY+++I G
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
E + A L+ EML + + P TY LI + G + QA + EM ++G P+
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 569 VVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI-ENCTNIEFQNVAALLK 627
V+T++ L+ G+ K EA + L K+ + P+ Y LI +NC +++ V L K
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Score = 253 bits (646), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 261/544 (47%), Gaps = 24/544 (4%)
Query: 176 GFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
GF+P V + N +L V+R R + A VY M + + P V T+N ++ GDL
Sbjct: 198 GFLPSVRNCNIVL-KVLRDSR--MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDL 254
Query: 236 EMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVI 295
E + + EM++ N + VTYN LI+G+ K G++++A + DM G S+N +
Sbjct: 255 ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPL 314
Query: 296 INGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGL 355
I G CK+G + G+ +E+ G+ P TYN + C G + A L + M
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA---- 370
Query: 356 SPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYR 415
+P+VV+Y +L++ K G A FD + ++ P+ TY TLI+G + G L+ A R
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 416 LLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFS 475
L EMT P ++TY L+KG G + A V M RKG+ PD +Y+T G
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 476 RSQELDKAFDTKREMVEKGV-LPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDE 534
R + DKAF EMV PD Y+ I GLC+ + +A E +++ G+ PD
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 535 FTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLK 594
TYTT+I Y G A L+DEM++K P V+TY VLI G K R +A +
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ---- 606
Query: 595 LFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNE 654
+ E V N + N ALL G C G ++EA R M + PN+
Sbjct: 607 -YSTEMKKRGVRPNVMTHN----------ALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655
Query: 655 AVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIEN 714
Y ++I + ++ LYK+M+ P T L K L + E+ + +E
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREV-EFLER 714
Query: 715 ILRS 718
+L S
Sbjct: 715 LLLS 718
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 225/476 (47%), Gaps = 55/476 (11%)
Query: 284 GIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQA 343
GI P +I++N +++ K G L+ I E+ R+ + EVTYN L+NG+ K G + +A
Sbjct: 233 GIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 344 LVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLING 403
H +M R+G + ++ LI CK G + A D+M + P TY I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 404 FSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPD 463
G +D+A LL+ M P +V+YN L+ G+ G+ +A + + + P
Sbjct: 353 LCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 464 VVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQ 523
+V+Y+T+I G S L+ A K EM + + PD ITY++L+ G + ++ A E++
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 524 EMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGF-LPDVVTYSVLINGLNKQ 582
EML +G+ PD + YTT GD +A RLH+EM+ PD+ Y+V I+GL K
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 583 ARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVF 642
++A + K+F VP V Y T+I +G+ G A ++
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVI---------------RGYLENGQFKMARNLY 573
Query: 643 ELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTA 702
+ ML++ P+ Y ++I+GH+K G +++A+ +M + G P+ +T L+ +
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM--- 630
Query: 703 GMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
C K GN+D L +M ++G+ PN
Sbjct: 631 ----------------C----------------KAGNIDEAYRYLCKMEEEGIPPN 654
Score = 213 bits (542), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/391 (30%), Positives = 210/391 (53%), Gaps = 8/391 (2%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
+++ Y + D A + + G P +YN + ++ GR + A E+ + M
Sbjct: 314 LIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGR---IDDARELLSSMA 370
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+P+V +YN L+ G+ +G F ++ + ++VTYNTLIDG C+ G ++
Sbjct: 371 ----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
A +L +M + I P++I+Y ++ G K G L + +E+ RKG+ PD Y T
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 332 NGYCKEGNLHQALVLHAEMV-RNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVREL 390
G + G+ +A LH EMV + +P++ Y I+ +CK GNL +A+EF ++ L
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 391 RPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVG 450
P+ TYTT+I G+ ++G A L +EM + PS++TY LI GH GR+E A
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 451 VLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLC 510
M ++G+ P+V++++ ++ G ++ +D+A+ +M E+G+ P+ +Y+ LI C
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNC 666
Query: 511 EQRRITEACELFQEMLSRGMSPDEFTYTTLI 541
+ + E +L++EML + + PD +T+ L
Sbjct: 667 DFEKWEEVVKLYKEMLDKEIEPDGYTHRALF 697
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/446 (28%), Positives = 219/446 (49%), Gaps = 26/446 (5%)
Query: 317 RKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLN 376
RKG +P N +L +++A ++ M+ +G+ P V+T+ ++++S K+G+L
Sbjct: 196 RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 377 RAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALI 436
R + + +M R + +E TY LINGFS++G ++EA R +M ++GF + ++N LI
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 437 KGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVL 496
+G+C G +DA GV M G+ P +Y+ I +D A RE++
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDA----RELLSSMAA 371
Query: 497 PDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRL 556
PD ++Y++L+HG + + EA LF ++ + + P TY TLI+ C G++ A RL
Sbjct: 372 PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Query: 557 HDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTN 616
+EM + PDV+TY+ L+ G K A ++ ++ P Y T
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT------- 484
Query: 617 IEFQNVAALLKGFCMKGLMNEADRVF----ELMLQRNHMPNEAVYDIIIHGHSKVGNVQK 672
+ V L G ++D+ F E++ +H P+ +Y++ I G KVGN+ K
Sbjct: 485 ---RAVGELRLG--------DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 673 AYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVE 732
A + +K+ R G VP VT +++ G + + + +LR VL+
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIY 593
Query: 733 INHKEGNMDAVLNVLTEMAKDGLLPN 758
+ K G ++ TEM K G+ PN
Sbjct: 594 GHAKAGRLEQAFQYSTEMKKRGVRPN 619
Score = 33.1 bits (74), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 20/150 (13%)
Query: 620 QNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHG---------------- 663
Q AA+L+ LM+EA V E + + + D++I G
Sbjct: 120 QAFAAMLEILAENDLMSEAYLVAERSID---LGMHEIDDLLIDGSFDKLIALKLLDLLLW 176
Query: 664 -HSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLS 722
++K +K ++KM+R GF+P +++K L + M + S V E ++ +
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 723 DAELAKVLVEINHKEGNMDAVLNVLTEMAK 752
+++ K G+++ V + EM +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 280/520 (53%), Gaps = 19/520 (3%)
Query: 182 LSYNAILDSVIRSG--RNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGL 239
+S N + + + +G +NN + A ++++M K SPN T++VLI F G++E L
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL 394
Query: 240 RFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGL 299
F+ +ME +V +T+I G+ K + ++A KL + G+ N+ N I++ L
Sbjct: 395 EFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWL 453
Query: 300 CKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNV 359
CK+G+ E +L+++ +G+ P+ V+YN ++ G+C++ N+ A ++ + ++ GL PN
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 360 VTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLL-N 418
TY+ LI+ ++ + A+E + M + N Y T+ING + G +A LL N
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 419 EMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQ 478
+ + S ++YN++I G G ++ AV M G++P+V++Y+++++G ++
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNN 633
Query: 479 ELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYT 538
+D+A + + EM KGV D Y +LI G C++ + A LF E+L G++P + Y
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 539 TLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYD 598
+LI+ + G++ AL L+ +M++ G D+ TY+ LI+GL K + A +L ++
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 599 ESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYD 658
VP ++IY ++ G KG + ++FE M + N PN +Y+
Sbjct: 754 GLVPDEIIYTVIV---------------NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYN 798
Query: 659 IIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKA 698
+I GH + GN+ +A+ L+ +M+ G +P T +LV
Sbjct: 799 AVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 246 bits (629), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 270/498 (54%), Gaps = 22/498 (4%)
Query: 175 HGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGD 234
G P ++++ +++ ++G ++ A E Y +M ++P+V+ + +I+G+
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGE---MEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 235 LEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNV 294
E L+ F E + LANV NT++ CK G+ D+A +LL M +GI PN++SYN
Sbjct: 425 HEEALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNN 483
Query: 295 IINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
++ G C++ + + + + I KGL P+ TY+ L++G + + AL + M +
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 355 LSPNVVTYTSLINSMCKSGNLNRAMEFFDQM-HVRELRPNEKTYTTLINGFSQHGFLDEA 413
+ N V Y ++IN +CK G ++A E M + L + +Y ++I+GF + G +D A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 414 YRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISG 473
EM NG P+++TY +L+ G C R++ A+ + M KG+ D+ +Y +I G
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDG 663
Query: 474 FSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPD 533
F + ++ A E++E+G+ P Y+SLI G + A +L+++ML G+ D
Sbjct: 664 FCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD 723
Query: 534 EFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLL 593
TYTTLI+ +G++ A L+ EM G +PD + Y+V++NGL+K+ + ++ K+
Sbjct: 724 LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFE 783
Query: 594 KLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFELMLQRNHMPN 653
++ + P+ +IYN A++ G +G ++EA R+ + ML + +P+
Sbjct: 784 EMKKNNVTPNVLIYN---------------AVIAGHYREGNLDEAFRLHDEMLDKGILPD 828
Query: 654 EAVYDIIIHGHSKVGNVQ 671
A +DI++ G +VGN+Q
Sbjct: 829 GATFDILVSG--QVGNLQ 844
Score = 232 bits (592), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 197/797 (24%), Positives = 350/797 (43%), Gaps = 102/797 (12%)
Query: 40 LTLLKRHPYQLNSLSSEFTPEAAFNLLLKTQSDQTLTLKFLKWAQPQ--PFFTPKLKCLT 97
++LL P Q + S ++LL +++ L+F WA+P F + +
Sbjct: 60 VSLLSAKPEQKDDAS-------VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVL 112
Query: 98 LHIL-TKFKLY-KSAQTLAQNLAVDLPRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKS 155
+HIL + + Y +++ L + ++ P + + S L ++ +S + ++ +
Sbjct: 113 IHILVSSPETYGRASDLLIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNA 172
Query: 156 YSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGK--- 212
YS D AV+IVN +P N L ++++ RN+ + A+E+Y+ M
Sbjct: 173 YSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQ--RNSLTE-AKELYSRMVAIGV 229
Query: 213 ---------------------------SR-----VSPNVYTYNVLIRGFCGVGDLEMGLR 240
SR P+ Y++ ++ C DL M
Sbjct: 230 DGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANS 289
Query: 241 FFSEM-EKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGL 299
EM EK C+ + TY ++I K G +DDA +L +M GI N+++ +I G
Sbjct: 290 LLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGH 349
Query: 300 CKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNV 359
CK L + +++ ++G P+ VT++ L+ + K G + +AL + +M GL+P+V
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSV 409
Query: 360 VTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNE 419
++I K A++ FD+ L N T+++ + G DEA LL++
Sbjct: 410 FHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 420 MTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQE 479
M G P++V+YN ++ GHC ++ A V + KGL P+ +YS +I G R+ +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 480 LDKAFDTKREMVEKGVLPDTITYSSLIHGLC----------------EQRRITEAC---- 519
A + M + + + Y ++I+GLC E++R+ +C
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 520 ----------------ELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQK 563
++EM G+SP+ TYT+L+N C + QAL + DEM K
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 564 GFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVA 623
G D+ Y LI+G K++ A L +L + PS IYN+LI
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI------------ 696
Query: 624 ALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRS 683
GF G M A +++ ML+ + Y +I G K GN+ A +LY +M
Sbjct: 697 ---SGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAV 753
Query: 684 GFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAV 743
G VP + V+V L G ++ ++ E + ++ + + ++ +++EGN+D
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 744 LNVLTEMAKDGLLPNSG 760
+ EM G+LP+
Sbjct: 814 FRLHDEMLDKGILPDGA 830
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 210/804 (26%), Positives = 360/804 (44%), Gaps = 80/804 (9%)
Query: 16 INLQIHRSLSTLSATADAVIADKAL-----TLLKRHPYQLNSLSSEFTPEAAFNLLLKTQ 70
+N R S+ SA A A KA+ LL Y N +E +LL +
Sbjct: 26 LNFLNSRGFSSDSAKALAAGISKAIKEGNFNLLDSSVYGSNLQRNETNL-----VLLSLE 80
Query: 71 SDQTLTLKFLKWAQ----PQPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDDG 126
S+ LK+ +WA+ F+T H+L + ++ A + + + +D
Sbjct: 81 SEPNSALKYFRWAEISGKDPSFYT------IAHVLIRNGMFDVADKVFDEMITNRGKD-- 132
Query: 127 NFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNA 186
F+ L D + + V +++ M+DKA+ I + G + S
Sbjct: 133 ---FNVLGSIR---DRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR 186
Query: 187 ILDSVIRSGRNNWVK--FAEEVYNEMGKSRVSPNVYTYNVLI-----------------R 227
+L+S+I S R + + F + + S VS + + + L R
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 228 GF------C-------GVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAF 274
GF C V +E+ R S + NVVT+ TLI+G+CK G +D AF
Sbjct: 247 GFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAF 306
Query: 275 KLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGY 334
L + M +GIEP+LI+Y+ +I+G K G L + ++ KG+ D V +++ ++ Y
Sbjct: 307 DLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVY 366
Query: 335 CKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNE 394
K G+L A V++ M+ G+SPNVVTYT LI +C+ G + A + Q+ R + P+
Sbjct: 367 VKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSI 426
Query: 395 KTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHG 454
TY++LI+GF + G L + L +M K G+ P +V Y L+ G G + A+
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 455 MARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRR 514
M + + +VV ++++I G+ R D+A R M G+ PD T+++++ + R
Sbjct: 487 MLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGR 546
Query: 515 ITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSV 574
+ EA LF M G+ PD Y TLI+A+C L+L D M + D+ +V
Sbjct: 547 LEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 606
Query: 575 LINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNI----EFQNVAALLK--- 627
+I+ L K R +A K L + P V YNT+I ++ E + + LLK
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 628 -------------GFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAY 674
C M+ A R+F +M ++ PN Y ++ SK +++ ++
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 675 DLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEIN 734
L+++M G P V+ +++ L G +E + + + + L D +L+
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 735 HKEGNMDAVLNVLTEMAKDGLLPN 758
K G + + M ++G+ P+
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPD 810
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 159/583 (27%), Positives = 293/583 (50%), Gaps = 19/583 (3%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
V+K S ++ I+ A +++L G P V+++ +++ + G + A +++ M
Sbjct: 258 VLKGLS-VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR---AFDLFKVME 313
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
+ + P++ Y+ LI G+ G L MG + FS+ +VV +++ ID Y K G +
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
A + + M +GI PN+++Y ++I GLC++GR+ E G+ +I ++G+ P VTY++L+
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELR 391
+G+CK GNL L+ +M++ G P+VV Y L++ + K G + AM F +M + +R
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493
Query: 392 PNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGV 451
N + +LI+G+ + DEA ++ M G P + T+ +++ GR+E+A+ +
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFL 553
Query: 452 LHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCE 511
M + GL PD ++Y T+I F + + M + D + +IH L +
Sbjct: 554 FFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
RI +A + F ++ M PD TY T+I YC+ + +A R+ + + F P+ VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 572 YSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCM 631
++LI+ L K A ++ + S P+ V Y L++ F + F
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD-----WFSKSVDIEGSF-- 726
Query: 632 KGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVT 691
++FE M ++ P+ Y III G K G V +A +++ + + + +P V
Sbjct: 727 --------KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA 778
Query: 692 IIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEIN 734
+L++ G E + + E++LR+ D L + L E N
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 821
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 229/472 (48%), Gaps = 7/472 (1%)
Query: 141 DSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWV 200
D S+ ID+ VKS + A + G P V++Y ++ + + GR +
Sbjct: 355 DVVVFSSTIDVYVKSGD----LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGR---I 407
Query: 201 KFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTL 260
A +Y ++ K + P++ TY+ LI GFC G+L G + +M K +VV Y L
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 261 IDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGL 320
+DG K G + A + M + I N++ +N +I+G C+ R E + + G+
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 321 VPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAME 380
PD T+ T++ EG L +AL L M + GL P+ + Y +LI++ CK ++
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ 587
Query: 381 FFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHC 440
FD M ++ + +I+ + +++A + N + + P IVTYN +I G+C
Sbjct: 588 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 647
Query: 441 TGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTI 500
+ R+++A + + P+ V+ + +I ++ ++D A M EKG P+ +
Sbjct: 648 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 501 TYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEM 560
TY L+ + I + +LF+EM +G+SP +Y+ +I+ C G + +A + +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 561 IQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIE 612
I LPDVV Y++LI G K R +EA L + + P D++ L E
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 145/618 (23%), Positives = 275/618 (44%), Gaps = 76/618 (12%)
Query: 217 PNVYTY-NVLIRGFCGVGDLEMGLRFFSEMEKN-----NCLANVVTYNT-------LIDG 263
P+ YT +VLIR G ++ + F EM N N L ++ + L++
Sbjct: 100 PSFYTIAHVLIRN----GMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMEC 155
Query: 264 YCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPD 323
C+ G +D A ++ G+ S ++N L R+ +++ R G+ P
Sbjct: 156 CCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPS 215
Query: 324 EVT-YNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
V+ + +L+ +G + +AL H ++ G +V+ ++ + + A
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLL 274
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTG 442
+ PN T+ TLINGF + G +D A+ L M + G P ++ Y+ LI G+
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 443 GRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITY 502
G + + KG+ DVV +S+ I + +S +L A + M+ +G+ P+ +TY
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTY 394
Query: 503 SSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ 562
+ LI GLC+ RI EA ++ ++L RGM P TY++LI+ +C G++ L+++MI+
Sbjct: 395 TILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 563 KGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNI----- 617
G+ PDVV Y VL++GL+KQ + A + +K+ + V++N+LI+ +
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 618 ---------------EFQNVAALLKGFCMKGLMNEA----DRVFEL-------------- 644
+ +++ M+G + EA R+F++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 645 ----------------MLQRNHMPNE-AVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVP 687
++QRN + + AV +++IH K ++ A + ++ P
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEP 634
Query: 688 HTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVL 747
VT ++ + +E ++ E + + + +L+ + K +MD + +
Sbjct: 635 DIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 694
Query: 748 TEMAKDGLLPNSGRSTYG 765
+ MA+ G PN+ TYG
Sbjct: 695 SIMAEKGSKPNA--VTYG 710
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 265/525 (50%), Gaps = 23/525 (4%)
Query: 206 VYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYC 265
++ +M KSR P++ ++ L+ + ++ + +M+ N+ TY+ I+ +C
Sbjct: 62 LFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFC 121
Query: 266 KLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEV 325
+ ++ A +L M G P++++ N ++NG C R+ E +++++ G PD V
Sbjct: 122 RRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 181
Query: 326 TYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQM 385
T+ TL++G + +A+ L MV G P++VTY ++IN +CK G + A+ ++M
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 386 HVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRV 445
++ + Y T+I+G ++ +D+A+ L N+M G P + TYN LI C GR
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 446 EDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE-KGVLPDTITYSS 504
DA +L M K + PD+V ++ +I F + +L +A EMV+ K PD + Y++
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNT 361
Query: 505 LIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKG 564
LI G C+ +R+ E E+F+EM RG+ + TYTTLI+ + D A + +M+ G
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 421
Query: 565 FLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVI-YNTLIEN-CTNIEFQN- 621
PD++TY++L++GL +E ++ + + D++ Y T+IE C + ++
Sbjct: 422 VHPDIMTYNILLDGLCNNG-NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 622 ------------------VAALLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHG 663
++ GFC KGL EAD +F M + +PN Y+ +I
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 664 HSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEEL 708
+ G+ + +L K+M GF T ++ LH +++
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSF 585
Score = 250 bits (639), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/487 (31%), Positives = 248/487 (50%), Gaps = 41/487 (8%)
Query: 162 IDKAVNIV-NLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVY 220
+D A+ + ++ K F P ++ ++ +L ++ + + + V E +G +S N+Y
Sbjct: 56 LDDAIGLFGDMVKSRPF-PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG---ISHNLY 111
Query: 221 TYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDM 280
TY++ I FC L + L +M K ++VT N+L++G+C RI +A L+ M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 281 -----------------GL------------------KGIEPNLISYNVIINGLCKEGRL 305
GL KG +P+L++Y +INGLCK G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 306 KETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSL 365
+LN++ + + D V YNT+++G CK ++ A L +M G+ P+V TY L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 366 INSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGF 425
I+ +C G + A M + + P+ + LI+ F + G L EA +L +EM K+
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 426 -MPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAF 484
P +V YN LIKG C RVE+ + V M+++GL + V+Y+T+I GF ++++ D A
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 485 DTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAY 544
++MV GV PD +TY+ L+ GLC + A +F+ M R M D TYTT+I A
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 545 CTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSD 604
C G + L + KG P+VVTY+ +++G ++ EA L +++ D +P+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 605 VIYNTLI 611
YNTLI
Sbjct: 532 GTYNTLI 538
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/518 (28%), Positives = 254/518 (49%), Gaps = 23/518 (4%)
Query: 269 RIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYN 328
++DDA L DM P+++ ++ +++ + K + + ++ G+ + TY+
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 329 TLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVR 388
+N +C+ L AL + +M++ G P++VT SL+N C ++ A+ DQM
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 389 ELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDA 448
+P+ T+TTL++G QH EA L+ M G P +VTY A+I G C G + A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 449 VGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHG 508
+ +L+ M + + DVV Y+TII G + + +D AFD +M KG+ PD TY+ LI
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 509 LCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQ-KGFLP 567
LC R ++A L +ML + ++PD + LI+A+ EG + +A +L+DEM++ K P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 568 DVVTYSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLI------ENCTNIE--F 619
DVV Y+ LI G K R E ++ ++ V + V Y TLI +C N + F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 620 QNVAA------------LLKGFCMKGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKV 667
+ + + LL G C G + A VFE M +R+ + Y +I K
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 668 GNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALHTAGMNEELSQVIENILRSCRLSDAELA 727
G V+ +DL+ + G P+ VT ++ G+ EE + + L ++
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 728 KVLVEINHKEGNMDAVLNVLTEMAKDGLLPNSGRSTYG 765
L+ ++G+ A ++ EM G ++ ST+G
Sbjct: 535 NTLIRARLRDGDEAASAELIKEMRSCGFAGDA--STFG 570
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 134/272 (49%), Gaps = 40/272 (14%)
Query: 179 PGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSR-VSPNVYTYNVLIRGFCGVGDLEM 237
P ++ +NA++D+ ++ G+ + AE++Y+EM KS+ P+V YN LI+GFC +E
Sbjct: 318 PDLVFFNALIDAFVKEGK---LVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 238 GLRFFSEMEKNNCLANVVTY-----------------------------------NTLID 262
G+ F EM + + N VTY N L+D
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLD 434
Query: 263 GYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVP 322
G C G ++ A + M + ++ ++++Y +I LCK G++++ + +S KG+ P
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKP 494
Query: 323 DEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFF 382
+ VTY T+++G+C++G +A L EM +G PN TY +LI + + G+ + E
Sbjct: 495 NVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELI 554
Query: 383 DQMHVRELRPNEKTYTTLINGFSQHGFLDEAY 414
+M + T+ L+ G LD+++
Sbjct: 555 KEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 126/234 (53%), Gaps = 6/234 (2%)
Query: 152 VVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMG 211
++K + +++ + + G + ++Y ++ ++ R+ A+ V+ +M
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA-RD--CDNAQMVFKQMV 418
Query: 212 KSRVSPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRID 271
V P++ TYN+L+ G C G++E L F M+K + ++VTY T+I+ CK G+++
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 272 DAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLL 331
D + L + LKG++PN+++Y +++G C++G +E + E+ G +P+ TYNTL+
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Query: 332 NGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQM 385
++G+ + L EM G + + T+ L+ +M G L+++ F D +
Sbjct: 539 RARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKS--FLDML 589
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 256 bits (654), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 188/646 (29%), Positives = 304/646 (47%), Gaps = 66/646 (10%)
Query: 79 FLKWAQ---PQPFFTPKLKCLTLHILTKFKLYKSAQTLAQNLAVDLPRDDGNFVFSC--- 132
F +WAQ P+ F P L L + + L A++L V R + C
Sbjct: 61 FFQWAQTSIPEAF--PSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLSLCNSL 118
Query: 133 LKETYHLCDSTSSSAVIDLVVKSYSHLNMIDKAVNIVNLAKVHGFMPGVLSYNAILDSVI 192
L HL S A+ D+ + +Y H A+ I P +L+ N +L ++
Sbjct: 119 LHPNLHL-SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177
Query: 193 RSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDLEMGL----RFFSE---- 244
R + + A EV+++M K VS NV T+NVL+ G+C G LE L R SE
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237
Query: 245 ----------------------------MEKNNCLANVVTYNTLIDGYCKLGRIDDAFKL 276
M+KN + N VTYN L+ GYCKLG + +AF++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 277 LRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCK 336
+ M + P+L +YN++INGLC G ++E +++ + L PD VTYNTL++G +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 337 EGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGN---LNRAMEFFDQMHVRELRPN 393
G +A L +M +G+ N VT+ + +CK + R ++ MH P+
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMH--GFSPD 415
Query: 394 EKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLH 453
TY TLI + + G L A ++ EM + G + +T N ++ C ++++A +L+
Sbjct: 416 IVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLN 475
Query: 454 GMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQR 513
++G D V+Y T+I GF R ++++KA + EM + + P T++SLI GLC
Sbjct: 476 SAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHG 535
Query: 514 RITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYS 573
+ A E F E+ G+ PD+ T+ ++I YC EG + +A ++E I+ F PD T +
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCN 595
Query: 574 VLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKG 633
+L+NGL K+ T +A L + V + V YNT+I FC
Sbjct: 596 ILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMI---------------SAFCKDK 639
Query: 634 LMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKK 679
+ EA + M ++ P+ Y+ I + G + + +L KK
Sbjct: 640 KLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 225 bits (574), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/553 (27%), Positives = 270/553 (48%), Gaps = 23/553 (4%)
Query: 217 PNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDG---YCKLGRIDDA 273
P+ +++ + + G + L+ F +M + N++T NTL+ G Y I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 274 FKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNE-ISRKGLVPDEVTYNTLLN 332
++ DM G+ N+ ++NV++NG C EG+L++ G+L +S + PD VTYNT+L
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 333 GYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRP 392
K+G L L +M +NGL PN VTY +L+ CK G+L A + + M + P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 393 NEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVL 452
+ TY LING G + E L++ M P +VTYN LI G G +A ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 453 HGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVE-KGVLPDTITYSSLIHGLCE 511
M G+ + V+++ + + ++ + +E+V+ G PD +TY +LI +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428
Query: 512 QRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVT 571
++ A E+ +EM +G+ + T T+++A C E + +A L + ++GF+ D VT
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488
Query: 572 YSVLINGLNKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCM 631
Y LI G ++ + +A ++ ++ + P+ +N+LI G C
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLI---------------GGLCH 533
Query: 632 KGLMNEADRVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVT 691
G A F+ + + +P+++ ++ II G+ K G V+KA++ Y + ++ F P T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 692 IIVLVKALHTAGMNEELSQVIENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMA 751
+L+ L GM E+ N L R D ++ K+ + ++L+EM
Sbjct: 594 CNILLNGLCKEGMTEKALNFF-NTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 752 KDGLLPNSGRSTY 764
+ GL P+ R TY
Sbjct: 653 EKGLEPD--RFTY 663
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 18/201 (8%)
Query: 176 GFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTYNVLIRGFCGVGDL 235
G +P ++N+I+ + GR V+ A E YNE K P+ YT N+L+ G C G
Sbjct: 551 GLLPDDSTFNSIILGYCKEGR---VEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 236 EMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVI 295
E L FF+ + + + + VTYNT+I +CK ++ +A+ LL +M KG+EP+ +YN
Sbjct: 608 EKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 296 INGLCKEGRLKETKGILNEISRK-GLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNG 354
I+ L ++G+L ET +L + S K G + ++ T N E +
Sbjct: 667 ISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSES-------------KEE 713
Query: 355 LSPNVVTYTSLINSMCKSGNL 375
L+ + Y+ +I+ +C G L
Sbjct: 714 LNTEAIAYSDVIDELCSRGRL 734
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 254 bits (650), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 231/431 (53%), Gaps = 15/431 (3%)
Query: 49 QLNSLSSEFTPEAAFNLLLKTQSDQTLTLKFLKWAQPQPFFTPKLK--CLTLHILTKFKL 106
+LN LS N+LLK Q D L+L+F WA+ + + L+ + LH LTK +
Sbjct: 71 KLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRK 130
Query: 107 YKSAQTLAQNL----AVDLPRDDGNFVFSCLKETYHLCDSTSSSAVIDLVVKSYSHLNMI 162
+KSA+++ +++ VDLP VF L +Y CDST V D + K+++HL
Sbjct: 131 FKSAESILRDVLVNGGVDLPAK----VFDALLYSYRECDSTPR--VFDSLFKTFAHLKKF 184
Query: 163 DKAVNIVNLAKVHGFMPGVLSYNAILDSVIRSGRNNWVKFAEEVYNEMGKSRVSPNVYTY 222
A + K +GF+P V S NA + S++ GR V A Y EM + ++SPN YT
Sbjct: 185 RNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGR---VDIALRFYREMRRCKISPNPYTL 241
Query: 223 NVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGL 282
N+++ G+C G L+ G+ +ME+ A V+YNTLI G+C+ G + A KL MG
Sbjct: 242 NMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGK 301
Query: 283 KGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQ 342
G++PN++++N +I+G C+ +L+E + E+ + P+ VTYNTL+NGY ++G+
Sbjct: 302 SGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Query: 343 ALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLIN 402
A + +MV NG+ +++TY +LI +CK +A +F ++ L PN T++ LI
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 403 GFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAP 462
G D + L M ++G P+ T+N L+ C + A VL M R+ +
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 463 DVVSYSTIISG 473
D + + +G
Sbjct: 482 DSRTVHQVCNG 492
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 178/353 (50%), Gaps = 2/353 (0%)
Query: 216 SPNVYTYNVLIRGFCGVGDLEMGLRFFSEMEKNNCLANVVTYNTLIDGYCKLGRIDDAFK 275
+P V+ + L + F + F +M+ L V + N + GR+D A +
Sbjct: 167 TPRVF--DSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALR 224
Query: 276 LLRDMGLKGIEPNLISYNVIINGLCKEGRLKETKGILNEISRKGLVPDEVTYNTLLNGYC 335
R+M I PN + N++++G C+ G+L + +L ++ R G +V+YNTL+ G+C
Sbjct: 225 FYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC 284
Query: 336 KEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEK 395
++G L AL L M ++GL PNVVT+ +LI+ C++ L A + F +M + PN
Sbjct: 285 EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTV 344
Query: 396 TYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGM 455
TY TLING+SQ G + A+R +M NG I+TYNALI G C + A + +
Sbjct: 345 TYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKEL 404
Query: 456 ARKGLAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRI 515
++ L P+ ++S +I G + D+ F+ + M+ G P+ T++ L+ C
Sbjct: 405 DKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDF 464
Query: 516 TEACELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPD 568
A ++ +EM+ R + D T + N +G +L EM K FL +
Sbjct: 465 DGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 174/346 (50%)
Query: 250 CLANVVTYNTLIDGYCKLGRIDDAFKLLRDMGLKGIEPNLISYNVIINGLCKEGRLKETK 309
C + +++L + L + +A M G P + S N ++ L +GR+
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIAL 223
Query: 310 GILNEISRKGLVPDEVTYNTLLNGYCKEGNLHQALVLHAEMVRNGLSPNVVTYTSLINSM 369
E+ R + P+ T N +++GYC+ G L + + L +M R G V+Y +LI
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 370 CKSGNLNRAMEFFDQMHVRELRPNEKTYTTLINGFSQHGFLDEAYRLLNEMTKNGFMPSI 429
C+ G L+ A++ + M L+PN T+ TLI+GF + L EA ++ EM P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 430 VTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPDVVSYSTIISGFSRSQELDKAFDTKRE 489
VTYN LI G+ G E A M G+ D+++Y+ +I G + + KA +E
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 490 MVEKGVLPDTITYSSLIHGLCEQRRITEACELFQEMLSRGMSPDEFTYTTLINAYCTEGD 549
+ ++ ++P++ T+S+LI G C ++ EL++ M+ G P+E T+ L++A+C D
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
Query: 550 IPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQARTMEAKKLLLKL 595
A ++ EM+++ D T + NGL Q + KKLL ++
Sbjct: 464 FDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 206/435 (47%), Gaps = 46/435 (10%)
Query: 288 NLISYNVIINGLCKEGRLKETKGILNEISRKGLV--PDEVTYNTLLNGY--CKEGNLHQA 343
+L ++ ++++ L K + K + IL ++ G V P +V ++ LL Y C
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKV-FDALLYSYRECDS------ 166
Query: 344 LVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQMHVRELRPNEKTYTTLING 403
+P V + SL + A + F QM P ++ ++
Sbjct: 167 ------------TPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSS 212
Query: 404 FSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKGLAPD 463
G +D A R EM + P+ T N ++ G+C G+++ + +L M R G
Sbjct: 213 LLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRAT 272
Query: 464 VVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEACELFQ 523
VSY+T+I+G L A K M + G+ P+ +T+++LIHG C ++ EA ++F
Sbjct: 273 DVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFG 332
Query: 524 EMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGLNKQA 583
EM + ++P+ TY TLIN Y +GD A R +++M+ G D++TY+ LI GL KQA
Sbjct: 333 EMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQA 392
Query: 584 RTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEADRVFE 643
+T +A + + +L + VP+ + +AL+ G C++ ADR FE
Sbjct: 393 KTRKAAQFVKELDKENLVPNSSTF---------------SALIMGQCVR---KNADRGFE 434
Query: 644 L---MLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKALH 700
L M++ PNE +++++ + + A + ++MVR + T+ + L
Sbjct: 435 LYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Query: 701 TAGMNEELSQVIENI 715
G ++ + ++++ +
Sbjct: 495 HQGKDQLVKKLLQEM 509
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 197/421 (46%), Gaps = 23/421 (5%)
Query: 342 QALVLHAEMVRNGLSPNVVTYTSLINSMCKSGNLNRAMEFFDQM--HVRELRPNEKTYTT 399
A+VLH + +N + S++ + +G ++ + FD + RE + + +
Sbjct: 118 HAIVLHT-LTKN---RKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDS 173
Query: 400 LINGFSQHGFLDEAYRLLNEMTKNGFMPSIVTYNALIKGHCTGGRVEDAVGVLHGMARKG 459
L F+ A +M GF+P++ + NA + GRV+ A+ M R
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 460 LAPDVVSYSTIISGFSRSQELDKAFDTKREMVEKGVLPDTITYSSLIHGLCEQRRITEAC 519
++P+ + + ++SG+ RS +LDK + ++M G ++Y++LI G CE+ ++ A
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 520 ELFQEMLSRGMSPDEFTYTTLINAYCTEGDIPQALRLHDEMIQKGFLPDVVTYSVLINGL 579
+L M G+ P+ T+ TLI+ +C + +A ++ EM P+ VTY+ LING
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 580 NKQARTMEAKKLLLKLFYDESVPSDVIYNTLIENCTNIEFQNVAALLKGFCMKGLMNEAD 639
++Q A + FY++ V + + + L N AL+ G C + +A
Sbjct: 354 SQQGDHEMAFR-----FYEDMVCNGIQRDILTYN----------ALIFGLCKQAKTRKAA 398
Query: 640 RVFELMLQRNHMPNEAVYDIIIHGHSKVGNVQKAYDLYKKMVRSGFVPHTVTIIVLVKAL 699
+ + + + N +PN + + +I G N + ++LYK M+RSG P+ T +LV A
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 700 HTAGMNEELSQVI-ENILRSCRLSDAELAKVLVEINHKEGNMDAVLNVLTEMAKDGLLPN 758
+ SQV+ E + RS L + +V + H +G V +L EM L
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKH-QGKDQLVKKLLQEMEGKKFLQE 517
Query: 759 S 759
S
Sbjct: 518 S 518
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,280,451
Number of Sequences: 539616
Number of extensions: 11621710
Number of successful extensions: 47143
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 30282
Number of HSP's gapped (non-prelim): 3330
length of query: 766
length of database: 191,569,459
effective HSP length: 125
effective length of query: 641
effective length of database: 124,117,459
effective search space: 79559291219
effective search space used: 79559291219
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)