BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004248
(766 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 94/163 (57%), Gaps = 6/163 (3%)
Query: 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA--YLLELD 581
F+ ++L A+ +FS+ N++ G G +++G L G V +KR+ + + + E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S H L+ L G CM E+ LVY YM NG ++S L + ++ LDW R +
Sbjct: 88 MISMAVHRNLLRLRGFCMT-PTERLLVYPYMANGSVASCLRERPESQ---PPLDWPKRQR 143
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
IA+G+A GL+YLH C +HRDV+A++ILLD++FE +G
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 186
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 95/165 (57%), Gaps = 10/165 (6%)
Query: 524 FTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA----YLLE 579
F+ ++L A+ +F + N++ G G +++G L G V +KR L+ +T+ + E
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKR--LKEERTQGGELQFQTE 77
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
++ S H L+ L G CM E+ LVY YM NG ++S L + ++ LDW R
Sbjct: 78 VEMISMAVHRNLLRLRGFCM-TPTERLLVYPYMANGSVASCLRERPESQ---PPLDWPKR 133
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+IA+G+A GL+YLH C +HRDV+A++ILLD++FE +G
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 9/177 (5%)
Query: 529 LLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVS 587
L AT +F LI +G G +++G+L G V +KR +S + E + E++ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
H LV L+G C ER NE L+YKYM NG+L LY ++ S+ W RL+I IGAA
Sbjct: 94 HPHLVSLIGFCDER-NEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAA 149
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLR 704
GL YLH T +HRDV++ +ILLD+ F ++ + +G + Q+ + +++
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFG-ISKKGTELDQTHLXXVVK 202
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 98/177 (55%), Gaps = 9/177 (5%)
Query: 529 LLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVK-TEAYLLELDFFSKVS 587
L AT +F LI +G G +++G+L G V +KR +S + E + E++ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
H LV L+G C ER NE L+YKYM NG+L LY ++ S+ W RL+I IGAA
Sbjct: 94 HPHLVSLIGFCDER-NEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAA 149
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLR 704
GL YLH T +HRDV++ +ILLD+ F ++ + +G + Q+ + +++
Sbjct: 150 RGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFG-ISKKGTELGQTHLXXVVK 202
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 9/288 (3%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IPD+L TL LDL G +P G+ + L SL LS N +G +P
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 191 XXXXXXXXXXXX-TGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGLGTLSK--LQYLNVS 246
+G +P S L +L +LD+SSN +G I P L K LQ L +
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 247 NNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL 306
NN IP G++PS L L L+ + N L G + L
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 307 FPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELN 366
V L+ ++L N TG P L + L + +S N TG +P + + L
Sbjct: 460 M-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI-LK 517
Query: 367 ISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHSNASSLDSN 411
+S N F G + LG R +DL+ N F G +P + + + +N
Sbjct: 518 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IP L L +L L +SG IP SLG+L+ L L L N L G IP
Sbjct: 405 GKIPPTL-SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 463
Query: 191 XXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
TG IP+ NL+ + +S+N LTG IP +G L L L +SNNS
Sbjct: 464 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 523
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSEL--RGLRSLQKFVIGNNFL---------- 298
+ +IPA+ G++P+ + + + F+ G ++
Sbjct: 524 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 583
Query: 299 ---SGNL---------SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNN 346
+GNL +N T + I G T P D SM LD+S N
Sbjct: 584 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM---MFLDMSYNM 640
Query: 347 FTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHS 403
+G +P ++ + LN+ N G + +G R ++DLS N +GR+P+ + +
Sbjct: 641 LSGYIPKEIGSMPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 55/304 (18%)
Query: 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG-VIPFSLGNLTN-L 168
D L+ + L + S G +P+ L +L LDL S + SG ++P N N L
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 169 TSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTG 228
LYL +NG TG IP PT L SL +S NYL+G
Sbjct: 394 QELYLQNNGFTGKIP-----------------------PT-LSNCSELVSLHLSFNYLSG 429
Query: 229 SIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSL 288
+IP LG+LSKL+ L + N L G +P EL +++L
Sbjct: 430 TIPSSLGSLSKLRDLKLWLNMLE------------------------GEIPQELMYVKTL 465
Query: 289 QKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT 348
+ ++ N L+G + L + L I L N TG P + + L +L +S N+F+
Sbjct: 466 ETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 349 GPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNASSL 408
G +P + S + L+++ N+F G + + + + ++ N+ G+ YV+ +
Sbjct: 525 GNIPAELGDCR-SLIWLDLNTNLFNGTIPAAMFK-QSGKIAANFIAGK--RYVYIKNDGM 580
Query: 409 DSNC 412
C
Sbjct: 581 KKEC 584
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 35/347 (10%)
Query: 85 NGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFL--------LPGSIPDW 136
NGSV G S + S+N + + LT L S + +FL PG +
Sbjct: 87 NGSVSGFKCSASLTSLDLSRNS--LSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG- 143
Query: 137 LGQQLPTLQALDLRSCSISG--VIPFSLGN-LTNLTSLYLSDNGLTGTIPXXXXXXXXXX 193
G +L +L+ LDL + SISG V+ + L + L L +S N ++G +
Sbjct: 144 -GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV------DVSRC 196
Query: 194 XXXXXXXXXTGNIPTSFGLLKNLSSL---DISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
+ N T L + S+L DIS N L+G + T ++L+ LN+S+N
Sbjct: 197 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 256
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRG-LRSLQKFVIGNNFLSGNLSVNLFPT 309
IP G +P L G +L + N G + F +
Sbjct: 257 VGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP-FFGS 313
Query: 310 VSQLQIIVLRQNGFTGP-PPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNIS 368
S L+ + L N F+G P D L M L++LD+S N F+G LP S +N++ S + L++S
Sbjct: 314 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 373
Query: 369 QNMFYGGLTPVLGR-----FRLVDLSGNYFEGRVPEYVHSNASSLDS 410
N F G + P L + + + L N F G++P + SN S L S
Sbjct: 374 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL-SNCSELVS 419
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 26/279 (9%)
Query: 128 LLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXX 187
+L G IP L + TL+ L L ++G IP L N TNL + LS+N LTG IP
Sbjct: 450 MLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 508
Query: 188 XXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGL---------GTLS 238
+GNIP G ++L LD+++N G+IP + ++
Sbjct: 509 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 568
Query: 239 KLQYLNVSNNSLASSIPA-------------QXXXXXXXXXXXXXXXXXXGSVPSELRGL 285
+Y+ + N+ + Q G
Sbjct: 569 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 628
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
S+ + N LSG + + ++ L I+ L N +G PD + + L +LD+S N
Sbjct: 629 GSMMFLDMSYNMLSGYIPKEI-GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 687
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR 384
G +P + S + T E+++S N G + P +G+F
Sbjct: 688 KLDGRIPQAMSAL-TMLTEIDLSNNNLSGPI-PEMGQFE 724
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 151/367 (41%), Gaps = 24/367 (6%)
Query: 67 DWPRKVDPCLVWNGVRCQN---GSVVGINISGF-------RRTRLGSQNPRFAADALVN- 115
D+P KV L N + + S+ G N+ G+ L + + D V+
Sbjct: 136 DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSR 195
Query: 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSD 175
+L + S IP +LG LQ LD+ +SG ++ T L L +S
Sbjct: 196 CVNLEFLDVSSNNFSTGIP-FLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 253
Query: 176 NGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGL 234
N G IP TG IP G L+ LD+S N+ G++PP
Sbjct: 254 NQFVGPIPPLPLKSLQYLSLAENKF--TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 311
Query: 235 GTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXXXXXXXXX-XGSVPSELRGLR-SLQKFV 292
G+ S L+ L +S+N+ + +P G +P L L SL
Sbjct: 312 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 371
Query: 293 IGNNFLSGNLSVNLFPT-VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPL 351
+ +N SG + NL + LQ + L+ NGFTG P L + +L L +S N +G +
Sbjct: 372 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 431
Query: 352 PNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVD---LSGNYFEGRVPEYVHSNASSL 408
P+S ++ + +L + NM G + L + ++ L N G +P + SN ++L
Sbjct: 432 PSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL-SNCTNL 489
Query: 409 DSNCLQN 415
+ L N
Sbjct: 490 NWISLSN 496
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 9/288 (3%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IPD+L TL LDL G +P G+ + L SL LS N +G +P
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 191 XXXXXXXXXXXX-TGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGLGTLSK--LQYLNVS 246
+G +P S L +L +LD+SSN +G I P L K LQ L +
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 247 NNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL 306
NN IP G++PS L L L+ + N L G + L
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 307 FPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELN 366
V L+ ++L N TG P L + L + +S N TG +P + + L
Sbjct: 463 M-YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI-LK 520
Query: 367 ISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHSNASSLDSN 411
+S N F G + LG R +DL+ N F G +P + + + +N
Sbjct: 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 124/300 (41%), Gaps = 32/300 (10%)
Query: 131 GSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXX 190
G IP L L +L L +SG IP SLG+L+ L L L N L G IP
Sbjct: 408 GKIPPTL-SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK 466
Query: 191 XXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
TG IP+ NL+ + +S+N LTG IP +G L L L +SNNS
Sbjct: 467 TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSEL--RGLRSLQKFVIGNNFL---------- 298
+ +IPA+ G++P+ + + + F+ G ++
Sbjct: 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKE 586
Query: 299 ---SGNL---------SVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNN 346
+GNL +N T + I G T P D SM LD+S N
Sbjct: 587 CHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM---MFLDMSYNM 643
Query: 347 FTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR---LVDLSGNYFEGRVPEYVHS 403
+G +P ++ + LN+ N G + +G R ++DLS N +GR+P+ + +
Sbjct: 644 LSGYIPKEIGSMPYLFI-LNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 130/304 (42%), Gaps = 55/304 (18%)
Query: 111 DALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISG-VIPFSLGNLTN-L 168
D L+ + L + S G +P+ L +L LDL S + SG ++P N N L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 169 TSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTG 228
LYL +NG TG IP PT L SL +S NYL+G
Sbjct: 397 QELYLQNNGFTGKIP-----------------------PT-LSNCSELVSLHLSFNYLSG 432
Query: 229 SIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSL 288
+IP LG+LSKL+ L + N L G +P EL +++L
Sbjct: 433 TIPSSLGSLSKLRDLKLWLNMLE------------------------GEIPQELMYVKTL 468
Query: 289 QKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFT 348
+ ++ N L+G + L + L I L N TG P + + L +L +S N+F+
Sbjct: 469 ETLILDFNDLTGEIPSGL-SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 349 GPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNASSL 408
G +P + S + L+++ N+F G + + + + ++ N+ G+ YV+ +
Sbjct: 528 GNIPAELGDCR-SLIWLDLNTNLFNGTIPAAMFK-QSGKIAANFIAGK--RYVYIKNDGM 583
Query: 409 DSNC 412
C
Sbjct: 584 KKEC 587
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 152/347 (43%), Gaps = 35/347 (10%)
Query: 85 NGSVVGINISGFRRTRLGSQNPRFAADALVNLTHLASFNASRFL--------LPGSIPDW 136
NGSV G S + S+N + + LT L S + +FL PG +
Sbjct: 90 NGSVSGFKCSASLTSLDLSRNS--LSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSG- 146
Query: 137 LGQQLPTLQALDLRSCSISG--VIPFSLGN-LTNLTSLYLSDNGLTGTIPXXXXXXXXXX 193
G +L +L+ LDL + SISG V+ + L + L L +S N ++G +
Sbjct: 147 -GLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV------DVSRC 199
Query: 194 XXXXXXXXXTGNIPTSFGLLKNLSSL---DISSNYLTGSIPPGLGTLSKLQYLNVSNNSL 250
+ N T L + S+L DIS N L+G + T ++L+ LN+S+N
Sbjct: 200 VNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF 259
Query: 251 ASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRG-LRSLQKFVIGNNFLSGNLSVNLFPT 309
IP G +P L G +L + N G + F +
Sbjct: 260 VGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP-FFGS 316
Query: 310 VSQLQIIVLRQNGFTGP-PPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNIS 368
S L+ + L N F+G P D L M L++LD+S N F+G LP S +N++ S + L++S
Sbjct: 317 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376
Query: 369 QNMFYGGLTPVLGR-----FRLVDLSGNYFEGRVPEYVHSNASSLDS 410
N F G + P L + + + L N F G++P + SN S L S
Sbjct: 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL-SNCSELVS 422
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 112/279 (40%), Gaps = 26/279 (9%)
Query: 128 LLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXX 187
+L G IP L + TL+ L L ++G IP L N TNL + LS+N LTG IP
Sbjct: 453 MLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG 511
Query: 188 XXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGL---------GTLS 238
+GNIP G ++L LD+++N G+IP + ++
Sbjct: 512 RLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571
Query: 239 KLQYLNVSNNSLASSIPA-------------QXXXXXXXXXXXXXXXXXXGSVPSELRGL 285
+Y+ + N+ + Q G
Sbjct: 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNN 631
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
S+ + N LSG + + ++ L I+ L N +G PD + + L +LD+S N
Sbjct: 632 GSMMFLDMSYNMLSGYIPKEI-GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFR 384
G +P + S + T E+++S N G + P +G+F
Sbjct: 691 KLDGRIPQAMSAL-TMLTEIDLSNNNLSGPI-PEMGQFE 727
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 151/367 (41%), Gaps = 24/367 (6%)
Query: 67 DWPRKVDPCLVWNGVRCQN---GSVVGINISGF-------RRTRLGSQNPRFAADALVN- 115
D+P KV L N + + S+ G N+ G+ L + + D V+
Sbjct: 139 DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSR 198
Query: 116 LTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSD 175
+L + S IP +LG LQ LD+ +SG ++ T L L +S
Sbjct: 199 CVNLEFLDVSSNNFSTGIP-FLGD-CSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256
Query: 176 NGLTGTIPXXXXXXXXXXXXXXXXXXXTGNIPTSF-GLLKNLSSLDISSNYLTGSIPPGL 234
N G IP TG IP G L+ LD+S N+ G++PP
Sbjct: 257 NQFVGPIPPLPLKSLQYLSLAENKF--TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314
Query: 235 GTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXXXXXXXXX-XGSVPSELRGLR-SLQKFV 292
G+ S L+ L +S+N+ + +P G +P L L SL
Sbjct: 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLD 374
Query: 293 IGNNFLSGNLSVNLFPT-VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPL 351
+ +N SG + NL + LQ + L+ NGFTG P L + +L L +S N +G +
Sbjct: 375 LSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTI 434
Query: 352 PNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVD---LSGNYFEGRVPEYVHSNASSL 408
P+S ++ + +L + NM G + L + ++ L N G +P + SN ++L
Sbjct: 435 PSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL-SNCTNL 492
Query: 409 DSNCLQN 415
+ L N
Sbjct: 493 NWISLSN 499
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 523 SFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA- 575
SF++ +L T +F + N + G G +++G + V K + + TE
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 576 ---YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQ 632
+ E+ +K H LV LLG + ++ LVY YMPNG SL + + D
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNG----SLLDRLSCLDGTP 128
Query: 633 SLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 174
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 18/170 (10%)
Query: 522 ESFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA 575
SF++ +L T +F + N + G G +++G + V K + + TE
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 576 ----YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
+ E+ +K H LV LLG + ++ LVY YMPNG SL + + D
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNG----SLLDRLSCLDGT 121
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 168
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 523 SFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA- 575
SF++ +L T +F + N + G G +++G + V K + + TE
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 73
Query: 576 ---YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQ 632
+ E+ +K H LV LLG + ++ LVY YMPNG SL + + D
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDD-LCLVYVYMPNG----SLLDRLSCLDGTP 128
Query: 633 SLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 174
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 523 SFTYQQLLAATGDFSD------ANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEA- 575
SF++ +L T +F + N G G +++G + V K + + TE
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL 64
Query: 576 ---YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQ 632
+ E+ +K H LV LLG + ++ LVY Y PNG SL + + D
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDD-LCLVYVYXPNG----SLLDRLSCLDGTP 119
Query: 633 SLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
L W R KIA GAA G+++LH +HRD+++++ILLD+ F ++
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKI 165
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G +G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 134 DLRAANILVSDTLSCKIADF 153
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 30 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 87
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 139
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 140 DLRAANILVSDTLSCKIADF 159
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 32 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 89
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 141
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 142 DLRAANILVSDTLSCKIADF 161
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 33 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 90
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 142
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 143 DLRAANILVSDTLSCKIADF 162
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 30 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 87
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 139
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 140 DLRAANILVSDTLSCKIADF 159
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 34 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 91
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 143
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 144 DLRAANILVSDTLSCKIADF 163
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG---GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D + I G G + R G + +++++ D + + +L E+ ++ H +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ-DFHAERVNEFLREVAIMKRLRHPNI 96
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V +G + N +V +Y+ G SLYR + + LD RL +A A+G++
Sbjct: 97 VLFMGAVTQPPNLS-IVTEYLSRG----SLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRL 681
YLH+ P VHRD+++ ++L+D K+ V++
Sbjct: 152 YLHNR-NPPIVHRDLKSPNLLVDKKYTVKV 180
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 26 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 83
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 135
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 136 DLRAANILVSDTLSCKIADF 155
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 29 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 86
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 138
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 139 DLRAANILVSDTLSCKIADF 158
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 134 DLRAANILVSDTLSCKIADF 153
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 134 DLRAANILVSDTLSCKIADF 153
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 25 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 82
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 134
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 135 DLRAANILVSDTLSCKIADF 154
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 134 DLRAANILVSDTLSCKIADF 153
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 19 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 76
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 128
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A++IL+ D ++
Sbjct: 129 DLRAANILVSDTLSCKIADF 148
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 146
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 75/150 (50%), Gaps = 10/150 (6%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG---GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D + I G G + R G + +++++ D + + +L E+ ++ H +
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ-DFHAERVNEFLREVAIMKRLRHPNI 96
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V +G + N +V +Y+ G SLYR + + LD RL +A A+G++
Sbjct: 97 VLFMGAVTQPPNLS-IVTEYLSRG----SLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRL 681
YLH+ P VHR++++ ++L+D K+ V++
Sbjct: 152 YLHNR-NPPIVHRNLKSPNLLVDKKYTVKV 180
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 139
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 169
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 165
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 195
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 166
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 196
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 147
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G G V +K + S+ +A+L E + ++ H RLV L + + +
Sbjct: 20 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEP 77
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM NG L L + + + L L +A AEG++++ ++HR
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKL-----LDMAAQIAEGMAFIEERN---YIHR 129
Query: 665 DVQASSILLDDKFEVRLGSL 684
+++A++IL+ D ++
Sbjct: 130 NLRAANILVSDTLSCKIADF 149
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 147
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 146
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 144
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 174
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 145
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 175
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 142
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YL + FVHRD+ A + +LD+KF V++
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 172
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 112 ALVNLTHLASFNASRFLLPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSL 171
A+ LT L + + G+IPD+L Q+ TL LD ++SG +P S+ +L NL +
Sbjct: 96 AIAKLTQLHYLYITHTNVSGAIPDFL-SQIKTLVTLDFSYNALSGTLPPSISSLPNLVGI 154
Query: 172 YLSDNGLTGTIPXXX-XXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSI 230
N ++G IP TG IP +F L NL+ +D+S N L G
Sbjct: 155 TFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDA 213
Query: 231 PPGLGTLSKLQYLNVSNNSLA 251
G+ Q ++++ NSLA
Sbjct: 214 SVLFGSDKNTQKIHLAKNSLA 234
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 103/265 (38%), Gaps = 15/265 (5%)
Query: 136 WLGQQLPT-LQALDLRSCSISGV-------IPFSLGNLTNLTSLYLSD-NGLTGTIPXXX 186
WLG T Q + + +SG+ IP SL NL L LY+ N L G IP
Sbjct: 38 WLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAI 97
Query: 187 XXXXXXXXXXXXXXXXTGNIPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVS 246
+G IP +K L +LD S N L+G++PP + +L L +
Sbjct: 98 AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157
Query: 247 NNSLASSIP-AQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVN 305
N ++ +IP + G +P L +L + N L G+ SV
Sbjct: 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASV- 215
Query: 306 LFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVEL 365
LF + Q I L +N V S L LD+ N G LP + + L
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLGKVGLSK-NLNGLDLRNNRIYGTLPQGLTQLKF-LHSL 273
Query: 366 NISQNMFYGGLTPVLGRFRLVDLSG 390
N+S N G + P G + D+S
Sbjct: 274 NVSFNNLCGEI-PQGGNLQRFDVSA 297
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 26/156 (16%)
Query: 535 DFSDANL---IKNGHSGDLFRGILEGG-IPVVIKRID--------LQSVKTEAYLLELDF 582
DF++ L I G G ++R G + V R D +++V+ EA L
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKL----- 59
Query: 583 FSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKI 642
F+ + H ++ L G C++ N LV ++ G L+ L K D L ++W
Sbjct: 60 FAMLKHPNIIALRGVCLKEPN-LCLVMEFARGGPLNRVLSGKRIPPDIL--VNW------ 110
Query: 643 AIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678
A+ A G++YLH E +P +HRD+++S+IL+ K E
Sbjct: 111 AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVE 146
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 206
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 152
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 182
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 92
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C E ++V +YMP G+L L R+ N E+ + + L +A + + YL
Sbjct: 93 LLGVCT-LEPPFYIVTEYMPYGNLLDYL-RECNREE----VTAVVLLYMATQISSAMEYL 146
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ F+HRD+ A + L+ + V++ GD + +
Sbjct: 147 EKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 148
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 178
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 145
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 175
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 147
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 147
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 540 NLIKNGHSGDLFRGIL---EGG-IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I GH G ++ G L +G I +K ++ + E +L E SH ++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN--TEDDLQSLDWITRLKIAIGAAEGLS 651
LLG C+ E +V YM +GDL + + +T+ T DL + + A+G+
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--------IGFGLQVAKGMK 148
Query: 652 YLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+L + FVHRD+ A + +LD+KF V++
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 178
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 521 GESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLE 579
G S Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVL 114
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQS 697
L +A + + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 169
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 10/165 (6%)
Query: 521 GESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLE 579
G S Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 1 GPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ +
Sbjct: 61 AAVMKEIKHPNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVNAVVL 114
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +A + + YL + F+HRD+ A + L+ + V++
Sbjct: 115 LYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 156
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 76
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 77 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 127
Query: 662 VHRDVQASSILLDD 675
+HRD+ A + L+ +
Sbjct: 128 IHRDLAARNCLVGE 141
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 70 EIKHPNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 123
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 70 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 123
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 73
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 124
Query: 662 VHRDVQASSILLDD 675
+HRD+ A + L+ +
Sbjct: 125 IHRDLAARNCLVGE 138
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 71
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 72 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 122
Query: 662 VHRDVQASSILLDD 675
+HRD+ A + L+ +
Sbjct: 123 IHRDLAARNCLVGE 136
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 277 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 334
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + +A A G++Y+ + +VH
Sbjct: 335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 386
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 387 RDLRAANILVGENLVCKVADF 407
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I S+ + ++ E + K+SH +LV L G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE- 93
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 94 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 144
Query: 662 VHRDVQASSILLDD 675
+HRD+ A + L+ +
Sbjct: 145 IHRDLAARNCLVGE 158
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 65 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 118
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 65 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 118
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 68
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 69 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 122
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 123 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 80/173 (46%), Gaps = 10/173 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 67 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 120
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQS 697
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 77
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 78 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 131
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 132 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 182
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 70 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 123
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAY 576
T G S Y + D + + + G G+++ G+ + + V +K + +++ E +
Sbjct: 243 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 302
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E ++ H LV LLG C RE +++ ++M G+L L E + Q ++
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-----RECNRQEVNA 356
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ L +A + + YL + F+HR++ A + L+ + V++ GD +
Sbjct: 357 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 697 SR 698
+
Sbjct: 414 AH 415
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 10/160 (6%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 70 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 123
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ + YL + F+HRD+ A + L+ + V++
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 160
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAY 576
T G S Y + D + + + G G+++ G+ + + V +K + +++ E +
Sbjct: 201 TVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 260
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E ++ H LV LLG C RE +++ ++M G+L L E + Q ++
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-----RECNRQEVNA 314
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ L +A + + YL + F+HR++ A + L+ + V++ GD +
Sbjct: 315 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
Query: 697 SR 698
+
Sbjct: 372 AH 373
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 194 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 251
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + +A A G++Y+ + +VH
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 303
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 304 RDLRAANILVGENLVCKVADF 324
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 67 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 120
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 194 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 251
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + +A A G++Y+ + +VH
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 303
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 304 RDLRAANILVGENLVCKVADF 324
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 66
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q ++ + L +A
Sbjct: 67 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVNAVVLLYMAT 120
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 121 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 21 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 78
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + +A A G++Y+ + +VH
Sbjct: 79 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 130
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 131 RDLRAANILVGENLVCKVADF 151
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q + + L +A
Sbjct: 65 EIKHPNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVSAVVLLYMAT 118
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q + + L +A
Sbjct: 65 EIKHPNLVQLLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVSAVVLLYMAT 118
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 69
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q + + L +A
Sbjct: 70 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMAT 123
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 124 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 174
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 194 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 251
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + +A A G++Y+ + +VH
Sbjct: 252 PIYIVGEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 303
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 304 RDLRAANILVGENLVCKVADF 324
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q + + L +A
Sbjct: 65 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMAT 118
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 79/174 (45%), Gaps = 10/174 (5%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFS 584
Y + D + + + G G+++ G+ + + V +K + +++ E +L E
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMK 64
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAI 644
++ H LV LLG C RE +++ ++M G+L L R+ N Q + + L +A
Sbjct: 65 EIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMAT 118
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+ + YL + F+HRD+ A + L+ + V++ GD + +
Sbjct: 119 QISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 10/182 (5%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAY 576
T G S Y + D + + + G G+++ G+ + + V +K + +++ E +
Sbjct: 204 TIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEF 263
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E ++ H LV LLG C RE +++ ++M G+L L R+ N Q +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSA 317
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQ 696
+ L +A + + YL + F+HR++ A + L+ + V++ GD +
Sbjct: 318 VVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374
Query: 697 SR 698
+
Sbjct: 375 AH 376
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 72 LLGVCT-REPPFYIIIEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 125
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ F+HRD+ A + L+ + V++
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADF 153
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 72 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 125
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ F+HRD+ A + L+ + V++
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADF 153
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 74
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV ++M +G LS L T+ L + + T L + + EG++YL C
Sbjct: 75 QAPICLVTEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEACV--- 125
Query: 662 VHRDVQASSILLDD 675
+HRD+ A + L+ +
Sbjct: 126 IHRDLAARNCLVGE 139
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 535 DFSDANLI---KNGHSGDLFRGILEGG--IPVVIKRIDLQSVKTEAYLLELDFFSKVSHA 589
DF N + HSG+L++G +G + V+K D + K+ + E SH
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 590 RLVPLLGHCMEREN-EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
++P+LG C L+ +MP G L + L+ TN +D +K A+ A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-----VVDQSQAVKFALDMAR 122
Query: 649 GLSYLHHECTLPFVHRD-VQASSILLDDKFEVRLGSLSEV 687
G+++LH P + R + + S+++D+ R+ S+++V
Sbjct: 123 GMAFLH--TLEPLIPRHALNSRSVMIDEDMTARI-SMADV 159
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 25 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 82
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + ++ A G++Y+ + +VH
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVER---MNYVH 134
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 135 RDLRAANILVGENLVCKVADF 155
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
D + + + G G+++ G+ + + V +K + +++ E +L E ++ H LV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 71
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
LLG C RE +++ ++M G+L L R+ N Q + + L +A + + YL
Sbjct: 72 LLGVCT-REPPFYIITEFMTYGNLLDYL-RECNR----QEVSAVVLLYMATQISSAMEYL 125
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ F+HRD+ A + L+ + V++
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVKVADF 153
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 18 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 75
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
+V +YM G L L +T L L + +A A G++Y+ + +VH
Sbjct: 76 PIXIVTEYMSKGSLLDFLKGETGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 127
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 128 RDLRAANILVGENLVCKVADF 148
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 25 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 82
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L +T L L + ++ A G++Y+ + +VH
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKYLRLPQL-----VDMSAQIASGMAYVER---MNYVH 134
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 135 RDLRAANILVGENLVCKVADF 155
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 17 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 74
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 75 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 126
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 127 RDLRAANILVGENLVCKVADF 147
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 19 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 76
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 77 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 128
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 129 RDLRAANILVGENLVCKVADF 149
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 195 QGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 252
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 304
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 305 RDLRAANILVGENLVCKVADF 325
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 34 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 92
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 93 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLH 143
Query: 664 RDVQASSILLDDKFEVRL 681
RD+ A + L++D+ V++
Sbjct: 144 RDLAARNCLVNDQGVVKV 161
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 34 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 92
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 93 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLH 143
Query: 664 RDVQASSILLDDKFEVRL 681
RD+ A + L++D+ V++
Sbjct: 144 RDLAARNCLVNDQGVVKV 161
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD+ A++IL+ + ++
Sbjct: 138 RDLAAANILVGENLVCKVADF 158
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 19 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 77
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 78 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLH 128
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD+ A + L++D+ V++
Sbjct: 129 RDLAARNCLVNDQGVVKVSDF 149
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 10/138 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 25 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 83
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 84 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLH 134
Query: 664 RDVQASSILLDDKFEVRL 681
RD+ A + L++D+ V++
Sbjct: 135 RDLAARNCLVNDQGVVKV 152
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 19 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 77
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 78 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLH 128
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD+ A + L++D+ V++
Sbjct: 129 RDLAARNCLVNDQGVVKVSDF 149
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 561 VVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V IK+I+ +S + +A+++EL S+V+H +V L G C+ N LV +Y G S
Sbjct: 35 VAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGG----S 86
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
LY + + L + + ++G++YLH +HRD++ ++LL V
Sbjct: 87 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL-----VA 141
Query: 681 LGSLSEVCAQG 691
G++ ++C G
Sbjct: 142 GGTVLKICDFG 152
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G+++ G G V IK + ++ EA+L E K+ H +LV L + + E
Sbjct: 28 QGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEE 85
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +YM G L L + L L + +A A G++Y+ + +VH
Sbjct: 86 PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQL-----VDMAAQIASGMAYVER---MNYVH 137
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD++A++IL+ + ++
Sbjct: 138 RDLRAANILVGENLVCKVADF 158
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 18 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 76
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 77 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLE---SKQFLH 127
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD+ A + L++D+ V++
Sbjct: 128 RDLAARNCLVNDQGVVKVSDF 148
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
G G + G G V IK I S+ + ++ E +SH +LV L G C ++
Sbjct: 14 TGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT-KQR 72
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
F++ +YM NG L + L R+ Q L L++ E + YL + F+H
Sbjct: 73 PIFIITEYMANGCLLNYL-REMRHRFQTQQL-----LEMCKDVCEAMEYLESK---QFLH 123
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD+ A + L++D+ V++
Sbjct: 124 RDLAARNCLVNDQGVVKVSDF 144
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 561 VVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSS 620
V IK+I+ +S + +A+++EL S+V+H +V L G C+ N LV +Y G S
Sbjct: 34 VAIKQIESES-ERKAFIVELRQLSRVNHPNIVKLYGACL---NPVCLVMEYAEGG----S 85
Query: 621 LYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
LY + + L + + ++G++YLH +HRD++ ++LL V
Sbjct: 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL-----VA 140
Query: 681 LGSLSEVCAQG 691
G++ ++C G
Sbjct: 141 GGTVLKICDFG 151
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I +G G + G V IK I ++ E ++ E + K+SH +LV L G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE- 73
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ LV+++M +G LS L T+ L + + T L + + EG++YL
Sbjct: 74 QAPICLVFEFMEHGCLSDYL----RTQRGLFAAE--TLLGMCLDVCEGMAYLEEASV--- 124
Query: 662 VHRDVQASSILLDD 675
+HRD+ A + L+ +
Sbjct: 125 IHRDLAARNCLVGE 138
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 130 VHRDLAARNVLVSE 143
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 139 VHRDLAARNVLVSE 152
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 124 VHRDLAARNVLVSE 137
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 15/156 (9%)
Query: 533 TGDFSDANLIKNGHSGDLFRG-ILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR- 590
G F L+ NG G +++G ++ G IK +D+ + E E++ K SH R
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN 82
Query: 591 LVPLLGHCMER-----ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIG 645
+ G +++ +++ +LV ++ G ++ + NT+ + +WI + I
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI---KNTKGNTLKEEWIAYICREI- 138
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
GLS+LH +HRD++ ++LL + EV+L
Sbjct: 139 -LRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMER 601
I G GD+ G G V +K I +A+L E +++ H+ LV LLG +E
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVKCIK-NDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 602 ENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF 661
+ ++V +YM G L L + + L LK ++ E + YL F
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRS-----VLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 662 VHRDVQASSILLDD 675
VHRD+ A ++L+ +
Sbjct: 311 VHRDLAARNVLVSE 324
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G V +K + ++ +A+L E + + H +LV L + RE
Sbjct: 24 GQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VVTREEP 82
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ +YM G L L + L L + + AEG++Y+ + ++HR
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERKN---YIHR 134
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A+++L+ + ++
Sbjct: 135 DLRAANVLVSESLMCKIADF 154
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 542 IKNGHSGDLFRGILEGGIPV-VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCME 600
I +G G +++G G + V ++K +D + +A+ E+ K H ++ +G+ M
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY-MT 102
Query: 601 RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP 660
++N +V ++ L L+ + Q +D IA A+G+ YLH +
Sbjct: 103 KDNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLID------IARQTAQGMDYLHAKN--- 152
Query: 661 FVHRDVQASSILLDDKFEVRLGSL 684
+HRD+++++I L + V++G
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDF 176
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 21/144 (14%)
Query: 540 NLIKNGHSGDLFRGILEGG-----IPVVIKRIDLQSVKTEA----YLLELDFFSKVSHAR 590
+I G G++++G+L+ +PV IK L++ TE +L E + SH
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIK--TLKAGYTEKQRVDFLGEAGIMGQFSHHN 107
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
++ L G + + ++ +YM NG L L K + + L + L+ G A G+
Sbjct: 108 IIRLEG-VISKYKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLR---GIAAGM 160
Query: 651 SYLHHECTLPFVHRDVQASSILLD 674
YL + +VHRD+ A +IL++
Sbjct: 161 KYL---ANMNYVHRDLAARNILVN 181
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 561 VVIKRIDLQSVKT--EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG--- 615
V IKRI+L+ +T + L E+ S+ H +V + + +E +LV K + G
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-DELWLVMKLLSGGSVL 96
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
D+ + K + + LD T I EGL YLH +HRDV+A +ILL +
Sbjct: 97 DIIKHIVAKGEHKSGV--LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGE 151
Query: 676 KFEVRLGS--LSEVCAQGGDAHQSRITR 701
V++ +S A GGD ++++ +
Sbjct: 152 DGSVQIADFGVSAFLATGGDITRNKVRK 179
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ V +K + S+ EA+L E + + H +LV L H + +
Sbjct: 26 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEP 83
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L ++ L L + + AEG++++ ++HR
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YIHR 135
Query: 665 DVQASSILL 673
D++A++IL+
Sbjct: 136 DLRAANILV 144
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 561 VVIKRIDLQSVKT--EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG--- 615
V IKRI+L+ +T + L E+ S+ H +V + + +E +LV K + G
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-DELWLVMKLLSGGSVL 101
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
D+ + K + + LD T I EGL YLH +HRDV+A +ILL +
Sbjct: 102 DIIKHIVAKGEHKSGV--LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGE 156
Query: 676 KFEVRLGS--LSEVCAQGGDAHQSRITR 701
V++ +S A GGD ++++ +
Sbjct: 157 DGSVQIADFGVSAFLATGGDITRNKVRK 184
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFL--VYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E+D + H ++ G C E + EK L V +Y+P G L L R S+
Sbjct: 66 EIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPR--------HSIGL 116
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR++ A ++LLD+ V++G L++ +G +
Sbjct: 117 AQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Query: 695 HQSR 698
++ R
Sbjct: 174 YRVR 177
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ V +K + S+ EA+L E + + H +LV L H + +
Sbjct: 193 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEP 250
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L ++ L L + + AEG++++ ++HR
Sbjct: 251 IYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YIHR 302
Query: 665 DVQASSILL 673
D++A++IL+
Sbjct: 303 DLRAANILV 311
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFL--VYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E+D + H ++ G C E + EK L V +Y+P G L L R S+
Sbjct: 66 EIDILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYLPR--------HSIGL 116
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR++ A ++LLD+ V++G L++ +G +
Sbjct: 117 AQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Query: 695 HQSR 698
++ R
Sbjct: 174 YRVR 177
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 14/154 (9%)
Query: 535 DFSDANLI---KNGHSGDLFRGILEGG--IPVVIKRIDLQSVKTEAYLLELDFFSKVSHA 589
DF N + HSG+L++G +G + V+K D + K+ + E SH
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHP 67
Query: 590 RLVPLLGHCMEREN-EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
++P+LG C L+ + P G L + L+ TN +D +K A+ A
Sbjct: 68 NVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNF-----VVDQSQAVKFALDXAR 122
Query: 649 GLSYLHHECTLPFVHRD-VQASSILLDDKFEVRL 681
G ++LH P + R + + S+ +D+ R+
Sbjct: 123 GXAFLH--TLEPLIPRHALNSRSVXIDEDXTARI 154
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ V +K + S+ EA+L E + + H +LV L H + +
Sbjct: 199 GQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKL--HAVVTKEP 256
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L ++ L L + + AEG++++ ++HR
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKL-----IDFSAQIAEGMAFIEQRN---YIHR 308
Query: 665 DVQASSILL 673
D++A++IL+
Sbjct: 309 DLRAANILV 317
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERE-NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E++ + H +V G C E N L+ +++P+G L L + N ++
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN------KINLK 126
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+LK A+ +G+ YL + +VHRD+ A ++L++ + +V++G
Sbjct: 127 QQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDF 170
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 544 NGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMEREN 603
+G G + G +G V +K I S+ + + E K+SH +LV G C +E
Sbjct: 18 SGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC-SKEY 76
Query: 604 EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVH 663
++V +Y+ NG L + L + Q L+ + EG+++L + F+H
Sbjct: 77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLE------MCYDVCEGMAFLE---SHQFIH 127
Query: 664 RDVQASSILLDDKFEVRLGSL 684
RD+ A + L+D V++
Sbjct: 128 RDLAARNCLVDRDLCVKVSDF 148
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERE-NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E++ + H +V G C E N L+ +++P+G L L + N ++
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN------KINLK 114
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+LK A+ +G+ YL + +VHRD+ A ++L++ + +V++G
Sbjct: 115 QQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDF 158
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 536 FSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQ----SVKTEAYLLELDFFSKVSHA 589
FSD I +G G ++ R + + V IK++ + K + + E+ F K+ H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114
Query: 590 RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
+ G C RE+ +LV +Y G S L E + L + + GA +G
Sbjct: 115 NTIQYRG-CYLREHTAWLVMEYCL-GSASDLL------EVHKKPLQEVEIAAVTHGALQG 166
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L+YLH + +HRDV+A +ILL + V+LG
Sbjct: 167 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 198
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 539 ANLIKNGHSGDLFRGIL--EGG--IPVVIKRIDLQSV---KTEAYLLELDFFSKVSHARL 591
++ G G + G L E G + V +K + L + + E +L E SH +
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 592 VPLLGHCMERENE----KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA 647
+ LLG C+E ++ ++ +M GDL + L + E + + T LK + A
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLY-SRLETGPKHIPLQTLLKFMVDIA 157
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQSRITRL 702
G+ YL + F+HRD+ A + +L D V + LS+ G Q RI ++
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 572 KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
K + + E+ S ++H +V L G N +V +++P GDL L D
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLL------DKA 116
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+ W +L++ + A G+ Y+ ++ P VHRD+++ +I L L + VCA+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS-----LDENAPVCAKV 170
Query: 692 GD 693
D
Sbjct: 171 AD 172
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 572 KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
K + + E+ S ++H +V L G N +V +++P GDL L D
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLL------DKA 116
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+ W +L++ + A G+ Y+ ++ P VHRD+++ +I L L + VCA+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS-----LDENAPVCAKV 170
Query: 692 GD 693
D
Sbjct: 171 AD 172
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/140 (20%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 545 GHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENE 604
G G+++ G V +K + ++ +A+L E + + H +LV L + +E
Sbjct: 23 GQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYA-VVTKEEP 81
Query: 605 KFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
+++ ++M G L L + L L + + AEG++Y+ + ++HR
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERKN---YIHR 133
Query: 665 DVQASSILLDDKFEVRLGSL 684
D++A+++L+ + ++
Sbjct: 134 DLRAANVLVSESLMCKIADF 153
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 572 KTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL 631
K + + E+ S ++H +V L G N +V +++P GDL L D
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLM---HNPPRMVMEFVPCGDLYHRLL------DKA 116
Query: 632 QSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+ W +L++ + A G+ Y+ ++ P VHRD+++ +I L L + VCA+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQS-----LDENAPVCAKV 170
Query: 692 GD 693
D
Sbjct: 171 AD 172
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 536 FSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQ----SVKTEAYLLELDFFSKVSHA 589
FSD I +G G ++ R + + V IK++ + K + + E+ F K+ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEV-VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75
Query: 590 RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEG 649
+ G C RE+ +LV +Y G S L E + L + + GA +G
Sbjct: 76 NTIQYRG-CYLREHTAWLVMEYCL-GSASDLL------EVHKKPLQEVEIAAVTHGALQG 127
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L+YLH + +HRDV+A +ILL + V+LG
Sbjct: 128 LAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDF 159
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 14/123 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKF-LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWI 637
E+D + H ++ G C + LV +Y+P G L L R S+
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR--------HSIGLA 134
Query: 638 TRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAH 695
L A EG++YLH + ++HRD+ A ++LLD+ V++G L++ +G + +
Sbjct: 135 QLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY 191
Query: 696 QSR 698
+ R
Sbjct: 192 RVR 194
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 35/168 (20%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRI--DLQSVKTEAYLLELDFFSKVSHARL 591
G FS +L++ H G + +KRI Q + EA E D +H +
Sbjct: 40 GGFSYVDLVEGLHDGHFY----------ALKRILCHEQQDREEAQR-EADMHRLFNHPNI 88
Query: 592 VPLLGHCM-ER--ENEKFLVYKYMPNGDLSSSLYRKTN-----TEDDLQSLDWITRLKIA 643
+ L+ +C+ ER ++E +L+ + G L + + R + TED + L +
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQI--------LWLL 140
Query: 644 IGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE---VRLGSLSEVC 688
+G GL +H + + HRD++ ++ILL D+ + + LGS+++ C
Sbjct: 141 LGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 540 NLIKNGHSGDLFRGI--------LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
+I GH G ++ G ++ I + + ++Q V EA+L E ++H +
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNHPNV 84
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLY--RKTNTEDDLQSLDWITRLKIAIGAAEG 649
+ L+G + E ++ YM +GDL + ++ T DL S + A G
Sbjct: 85 LALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF--------GLQVARG 136
Query: 650 LSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ YL + FVHRD+ A + +LD+ F V++
Sbjct: 137 MEYLAEQ---KFVHRDLAARNCMLDESFTVKVADF 168
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 73 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 124
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 68 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 13 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 73 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 124
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 125 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 167
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 10 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 70 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 121
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 122 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 164
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + + G SSLY + + + I + IA A+G+ Y
Sbjct: 96 LFMGYSTK---PQLAIVTQWCEG---SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 147
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 190
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 535 DFSDANLIKNGHSGDLFRGILE-GGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
DF + LI +G G +F+ G VI+R+ + K E E+ +K+ H +V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER---EVKALAKLDHVNIVH 69
Query: 594 LLGHCMER-------------------ENEK----------FLVYKYMPNGDLSSSLYRK 624
G C + EN K F+ ++ G L + ++
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 625 TNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ LD + L++ +G+ Y+H + +HRD++ S+I L D +V++G
Sbjct: 129 RG-----EKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 685 SEVCAQGGDAHQSRITRLLRLPQSSEQGSS 714
V + D ++R LR S EQ SS
Sbjct: 181 GLVTSLKNDGKRTRSKGTLRY-MSPEQISS 209
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 138 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 695 HQSR 698
+ +
Sbjct: 189 XKVK 192
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 79 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 137
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 138 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 188
Query: 695 HQSR 698
+ +
Sbjct: 189 XKVK 192
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 35 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + + G SSLY + + + I + IA A+G+ Y
Sbjct: 95 LFMGYSTK---PQLAIVTQWCEG---SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 146
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 147 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 189
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 540 NLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I +G SG++ G L + +PV IK + + + +L E + H ++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L G + R +V +YM NG L + L T D ++ + + +GA G+ YL
Sbjct: 115 LEG-VVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGMLRGVGA--GMRYL 167
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L +VHRD+ A ++L+D ++ LS V DA
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 150
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 151 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 201
Query: 695 HQSR 698
+ +
Sbjct: 202 XKVK 205
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 120 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 695 HQSR 698
+ +
Sbjct: 171 XKVK 174
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 120 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 170
Query: 695 HQSR 698
+ +
Sbjct: 171 XKVK 174
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 540 NLIKNGHSGDLFRGIL----EGGIPVVIKRIDLQSVKTEA--YLLELDFFSKVSHARLVP 593
+I +G SG++ G L + +PV IK + + + +L E + H ++
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L G + R +V +YM NG L + L T D ++ + + +GA G+ YL
Sbjct: 115 LEG-VVTRGRLAMIVTEYMENGSLDTFL----RTHDGQFTIMQLVGMLRGVGA--GMRYL 167
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L +VHRD+ A ++L+D ++ LS V DA
Sbjct: 168 ---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 123
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 124 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 174
Query: 695 HQSR 698
+ +
Sbjct: 175 XKVK 178
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 118
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 119 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 169
Query: 695 HQSR 698
+ +
Sbjct: 170 XKVK 173
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 119
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGD 693
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 120 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 59 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 117
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 118 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 168
Query: 695 HQSR 698
+ +
Sbjct: 169 XKVK 172
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 68 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 126
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+++ +G+ YL T ++HRD+ +IL++++ V++G
Sbjct: 127 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 165
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHA 589
D ++I G+ G + + ++ + IKR+ + K + + EL+ K+ H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 590 -RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITR 639
++ LLG C E +L +Y P+G+L L + E D +L
Sbjct: 76 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A A G+ YL + F+HRD+ A +IL+ + + ++
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 176
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 122
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 123 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 695 HQSR 698
+ +
Sbjct: 174 XKVK 177
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 124
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 125 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 175
Query: 695 HQSR 698
+ +
Sbjct: 176 XKVK 179
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L + D ++ L +
Sbjct: 67 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQY 125
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 126 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 176
Query: 695 HQSR 698
+ +
Sbjct: 177 XKVK 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHA 589
D ++I G+ G + + ++ + IKR+ + K + + EL+ K+ H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 590 -RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITR 639
++ LLG C E +L +Y P+G+L L + E D +L
Sbjct: 86 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A A G+ YL + F+HRD+ A +IL+ + + ++
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADF 186
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK++H +V +
Sbjct: 55 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCI 114
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 115 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 173
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 174 N---HFIHRDIAARNCLL 188
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 68 LFMGYSTAPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ 162
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK++H +V +
Sbjct: 41 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCI 100
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 101 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 160 N---HFIHRDIAARNCLL 174
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKF--LVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C E + EK LV +Y+P G L L R L
Sbjct: 61 EIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL----- 114
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR + A ++LLD+ V++G L++ +G +
Sbjct: 115 ---LLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
Query: 695 HQSR 698
++ R
Sbjct: 169 YRVR 172
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 55 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCI 114
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 115 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 173
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 174 N---HFIHRDIAARNCLL 188
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKF--LVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C E + EK LV +Y+P G L L R L
Sbjct: 60 EIEILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL----- 113
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
L A EG++YLH + ++HR + A ++LLD+ V++G L++ +G +
Sbjct: 114 ---LLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
Query: 695 HQSR 698
++ R
Sbjct: 168 YRVR 171
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EA L E+D KVS + L E FLV+ M G+L L K +
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-- 112
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
TR KI E + LH L VHRD++ +ILLDD ++L C
Sbjct: 113 ----TR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 159
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 40 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 99
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 100 GVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 159 N---HFIHRDIAARNCLL 173
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 530 LAATGDFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVK--TEAYLLELDFFSKV 586
++++ F + NG +++G+ + G+ V +K + L S + + E+ ++
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 587 SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKT--NTEDDLQSLDWITRLKIAI 644
H +V L + EN+ LV+++M N DL + +T NT L+ L+ + + +
Sbjct: 61 KHENIVRLYD-VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLE-LNLVKYFQWQL 117
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
+GL++ H L HRD++ ++L++ + +++LG A G
Sbjct: 118 --LQGLAFCHENKIL---HRDLKPQNLLINKRGQLKLGDFGLARAFG 159
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 55 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 114
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 115 GVSLQ-SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 173
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 174 N---HFIHRDIAARNCLL 188
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 40 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 99
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 100 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 159 N---HFIHRDIAARNCLL 173
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 32 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 91
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 92 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 150
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 151 N---HFIHRDIAARNCLL 165
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 81 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 140
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 141 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 199
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 200 N---HFIHRDIAARNCLL 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EA L E+D KVS + L E FLV+ M G+L L K +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-- 125
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
TR KI E + LH L VHRD++ +ILLDD ++L C
Sbjct: 126 ----TR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 58 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 117
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 118 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 176
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 177 N---HFIHRDIAARNCLL 191
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 57 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 116
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 117 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 175
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 176 N---HFIHRDIAARNCLL 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 574 EAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS 633
EA L E+D KVS + L E FLV+ M G+L L K +
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE-- 125
Query: 634 LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
TR KI E + LH L VHRD++ +ILLDD ++L C
Sbjct: 126 ----TR-KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 41/155 (26%)
Query: 540 NLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGH-- 597
LI G G +++G L+ PV +K + + +F ++ + R VPL+ H
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQ--------NFINEKNIYR-VPLMEHDN 68
Query: 598 -----------CMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+ E LV +Y PNG L L L + DW++ ++A
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL--------SLHTSDWVSSCRLAHSV 120
Query: 647 AEGLSYLHHECTLP--------FVHRDVQASSILL 673
GL+YLH E LP HRD+ + ++L+
Sbjct: 121 TRGLAYLHTE--LPRGDHYKPAISHRDLNSRNVLV 153
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 41 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 100
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 101 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 160 N---HFIHRDIAARNCLL 174
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 47 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 106
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 107 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 165
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 166 N---HFIHRDIAARNCLL 180
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 41 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 100
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 101 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 160 N---HFIHRDIAARNCLL 174
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 12 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ L L+ + T+ +++ L + IA A G+ Y
Sbjct: 72 LFMGYSTK--PQLAIVTQWCEGSSLYHHLH-ASETKFEMKKL-----IDIARQTARGMDY 123
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDAHQ 696
LH + +HRD+++++I L + V++G L+ V ++ +HQ
Sbjct: 124 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQ 166
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 542 IKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHC 598
I G+ G++F G L + V R L +L E + SH +V L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 599 MERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECT 658
+++ ++V + + GD + L R +++L L++ AA G+ YL +C
Sbjct: 182 TQKQ-PIYIVMELVQGGDFLTFL-RTEGARLRVKTL-----LQMVGDAAAGMEYLESKCC 234
Query: 659 LPFVHRDVQASSILLDDK 676
+HRD+ A + L+ +K
Sbjct: 235 ---IHRDLAARNCLVTEK 249
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 13/145 (8%)
Query: 535 DFSDANLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEAYLLELDFFSKVSHARL 591
D I G+ G++F G L + V R L +L E + SH +
Sbjct: 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI 174
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLS 651
V L+G C +++ ++V + + GD + L R +++L L++ AA G+
Sbjct: 175 VRLIGVCTQKQ-PIYIVMELVQGGDFLTFL-RTEGARLRVKTL-----LQMVGDAAAGME 227
Query: 652 YLHHECTLPFVHRDVQASSILLDDK 676
YL +C +HRD+ A + L+ +K
Sbjct: 228 YLESKCC---IHRDLAARNCLVTEK 249
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 310 VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369
+S L I+ L NGF P +V + +L+++D+ NN LP S N S LN+ +
Sbjct: 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQK 593
Query: 370 NMF-----------YGGLTPVLGRFRLVDLSGN---YFEGRVPEYVHSNASSLDSNCLQN 415
N+ + LT + RF D + +F + E H+N L S+ L N
Sbjct: 594 NLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN 652
Query: 416 VP 417
P
Sbjct: 653 TP 654
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 310 VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369
+S L I+ L NGF P +V + +L+++D+ NN LP S N S LN+ +
Sbjct: 540 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQK 598
Query: 370 NMF-----------YGGLTPVLGRFRLVDLSGN---YFEGRVPEYVHSNASSLDSNCLQN 415
N+ + LT + RF D + +F + E H+N L S+ L N
Sbjct: 599 NLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN 657
Query: 416 VP 417
P
Sbjct: 658 TP 659
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 16/122 (13%)
Query: 310 VSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSNVNTSTVELNISQ 369
+S L I+ L NGF P +V + +L+++D+ NN LP S N S LN+ +
Sbjct: 545 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNL-NTLPASVFNNQVSLKSLNLQK 603
Query: 370 NMF-----------YGGLTPVLGRFRLVDLSGN---YFEGRVPEYVHSNASSLDSNCLQN 415
N+ + LT + RF D + +F + E H+N L S+ L N
Sbjct: 604 NLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCN 662
Query: 416 VP 417
P
Sbjct: 663 TP 664
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 544 NGHSGDLFRGILEG----GIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPLL 595
+G G+++ G + G P+ + L V +E +L+E SK +H +V +
Sbjct: 67 HGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCI 126
Query: 596 GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
G ++ +F++ + M GDL S L SL + L +A A G YL
Sbjct: 127 GVSLQ-SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 185
Query: 656 ECTLPFVHRDVQASSILL 673
F+HRD+ A + LL
Sbjct: 186 N---HFIHRDIAARNCLL 200
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 17/158 (10%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERE 602
G G +++ I E G V IK++ ++S + + E+ + +V G +
Sbjct: 39 EGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYF-KN 96
Query: 603 NEKFLVYKYMPNGDLSS--SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLP 660
+ ++V +Y G +S L KT TED++ + I +GL YLH +
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT--------ILQSTLKGLEYLHF---MR 145
Query: 661 FVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+HRD++A +ILL+ + +L V Q D R
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFG-VAGQLTDXMAKR 182
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 137
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
A+G++YL+ + FVHRD+ A + ++ F V++G
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +Y+P G L L D ++ L +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEYLPYGSLRDYLQAHAERIDHIKLLQY 122
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 123 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 695 HQSR 698
+ +
Sbjct: 174 XKVK 177
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 579 ELDFFSKVSHARLVPLLGHCME--RENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
E++ + H +V G C R N K L+ +++P G L L + D ++ L +
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLK-LIMEFLPYGSLREYLQKHKERIDHIKLLQY 122
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGDA 694
+++ +G+ YL T ++HRD+ +IL++++ V++G L++V Q +
Sbjct: 123 TSQI------CKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEX 173
Query: 695 HQSR 698
+ +
Sbjct: 174 XKVK 177
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 31/159 (19%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 29 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYR-KTNTEDD-------LQSLDWITRLKIAIG 645
LLG + + +V + M +GDL S L + E++ LQ + +++A
Sbjct: 82 LLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMAAE 135
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
A+G++YL+ + FVHRD+ A + ++ F V++G
Sbjct: 136 IADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 171
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 137
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
A+G++YL+ + FVHRD+ A + ++ F V++G
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 137
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
A+G++YL+ + FVHRD+ A + ++ F V++G
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ SSLY + + + I + IA A+G+ Y
Sbjct: 68 LFMGYSTKPQLA--IVTQWCEG----SSLYHHLHIIET--KFEMIKLIDIARQTAQGMDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
LH + +HRD+++++I L + V++G
Sbjct: 120 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDF 148
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 535 DFSDANLIKNGHSGDLFRGILEGG---IPVVIKRIDLQSVKTEA--YLLELDFFSKVSHA 589
D ++I G+ G + + ++ + IKR+ + K + + EL+ K+ H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 590 -RLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITR 639
++ LLG C E +L +Y P+G+L L + E D +L
Sbjct: 83 PNIINLLGAC-EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A A G+ YL + F+HR++ A +IL+ + + ++
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADF 183
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 36 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + + G SSLY + + + I + IA A+G+ Y
Sbjct: 96 LFMGYSTK---PQLAIVTQWCEG---SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 147
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
LH + +HRD+++++I L + V++G
Sbjct: 148 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDF 176
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 28 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + + G SSLY + + + I + IA A+G+ Y
Sbjct: 88 LFMGYSTK---PQLAIVTQWCEG---SSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDY 139
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
LH + +HRD+++++I L + V++G
Sbjct: 140 LHAKS---IIHRDLKSNNIFLHEDLTVKIGDF 168
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 32 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 85 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 137
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
A+G++YL+ + FVHRD+ A + ++ F V++G
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 25/172 (14%)
Query: 528 QLLAATGDFSD--ANLIKNGHSGDLFRGIL------EGGIPVVIKRIDLQSVKTEAYLL- 578
QL+ + GD + AN IK G GI+ G V +K++DL+ + L
Sbjct: 35 QLVVSPGDPREYLANFIKIGEGST---GIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN 91
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E+ H +V + + +E ++V +++ G L+ + E+ + +
Sbjct: 92 EVVIMRDYHHDNVVDMYSSYLV-GDELWVVMEFLEGGALTDIVTHTRMNEEQIAT----- 145
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQ 690
+ + LSYLH++ +HRD+++ SILL ++L CAQ
Sbjct: 146 ---VCLSVLRALSYLHNQGV---IHRDIKSDSILLTSDGRIKLSDFG-FCAQ 190
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 33/160 (20%)
Query: 541 LIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE-LDFFSKVSHAR------LVP 593
++ G++ D+ +G E R+ +++V A L E ++F ++ S + +V
Sbjct: 31 MVYEGNARDIIKGEAE-------TRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDD---------LQSLDWITRLKIAI 644
LLG + + +V + M +GDL S L R E + LQ + +++A
Sbjct: 84 LLG-VVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEM-----IQMAA 136
Query: 645 GAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
A+G++YL+ + FVHRD+ A + ++ F V++G
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF 173
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDL 333
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDL 333
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDL 333
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
++E +KV H+R + L + E + + LV M GD+ +Y N ++D
Sbjct: 233 MVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY---NVDEDNPGFQE 288
Query: 637 ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ GL +LH ++RD++ ++LLDD VR+ L
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNI---IYRDLKPENVLLDDDGNVRISDL 333
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D + V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 63 VLKKATLKVRDRVRTKMERDILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 121
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L A GL +LH +L ++RD++ +ILLD++ ++
Sbjct: 122 SKEVMFTEEDVKF--YLAEL------ALGLDHLH---SLGIIYRDLKPENILLDEEGHIK 170
Query: 681 L 681
L
Sbjct: 171 L 171
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + FVHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 12/113 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C+E + +V++YM +GDL+ L R + L +
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEG-DPLIMVFEYMKHGDLNKFL-RAHGPDAVLMAEGNPP 122
Query: 634 --LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L IA A G+ YL + FVHRD+ + L+ + V++G
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDF 172
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D +V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 59 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 117
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L +A L +LH +L ++RD++ +ILLD++ ++
Sbjct: 118 SKEVMFTEEDVKF--YLAELALA------LDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 681 L 681
L
Sbjct: 167 L 167
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D +V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 60 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 118
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L +A L +LH +L ++RD++ +ILLD++ ++
Sbjct: 119 SKEVMFTEEDVKF--YLAELALA------LDHLH---SLGIIYRDLKPENILLDEEGHIK 167
Query: 681 L 681
L
Sbjct: 168 L 168
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRG-ILEGGIPVVIKRI---DLQSVKTEAYLL-ELDFFSKVSH 588
+F I G +++R L G+PV +K++ DL K A + E+D +++H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
++ +E +NE +V + GDLS + + + + + T K +
Sbjct: 92 PNVIKYYASFIE-DNELNIVLELADAGDLSRMI---KHFKKQKRLIPERTVWKYFVQLCS 147
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L ++H + HRD++ +++ + V+LG L
Sbjct: 148 ALEHMHSRRVM---HRDIKPANVFITATGVVKLGDL 180
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 16/186 (8%)
Query: 518 TNLGESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAY 576
+LG Y Q + F+ I G G++F+GI VV IK IDL+ + E
Sbjct: 11 VDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE 70
Query: 577 LL--ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSL 634
+ E+ S+ + G + ++ + +++ +Y+ G L + L
Sbjct: 71 DIQQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPL 121
Query: 635 DWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694
D I +GL YLH E +HRD++A+++LL + EV+L V Q D
Sbjct: 122 DETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDT 177
Query: 695 HQSRIT 700
R T
Sbjct: 178 QIKRNT 183
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 558 GIPVVIKRIDLQSV-KTEAYLL--ELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMP 613
G +V K +D S+ + E +L E++ ++ H +V ++R N ++V +Y
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 614 NGDLSSSLYRKTNTEDDLQS---LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670
GDL+S + + T L L +T+L +A+ S H +HRD++ ++
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGH----TVLHRDLKPAN 146
Query: 671 ILLDDKFEVRLGSL 684
+ LD K V+LG
Sbjct: 147 VFLDGKQNVKLGDF 160
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 65/121 (53%), Gaps = 13/121 (10%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
V+K+ L+ +E D +V+H +V L + + E + +L+ ++ GDL + L
Sbjct: 59 VLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL 117
Query: 622 YRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVR 680
++ TE+D++ ++ L +A L +LH +L ++RD++ +ILLD++ ++
Sbjct: 118 SKEVMFTEEDVKF--YLAELALA------LDHLH---SLGIIYRDLKPENILLDEEGHIK 166
Query: 681 L 681
L
Sbjct: 167 L 167
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 558 GIPVVIKRIDLQSV-KTEAYLL--ELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMP 613
G +V K +D S+ + E +L E++ ++ H +V ++R N ++V +Y
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 614 NGDLSSSLYRKTNTEDDLQS---LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670
GDL+S + + T L L +T+L +A+ S H +HRD++ ++
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGH----TVLHRDLKPAN 146
Query: 671 ILLDDKFEVRLGSL 684
+ LD K V+LG
Sbjct: 147 VFLDGKQNVKLGDF 160
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 85 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 142
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 143 -----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 195 TRGGKIP 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Query: 558 GIPVVIKRIDLQSV-KTEAYLL--ELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMP 613
G +V K +D S+ + E +L E++ ++ H +V ++R N ++V +Y
Sbjct: 31 GKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90
Query: 614 NGDLSSSLYRKTNTEDDLQS---LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASS 670
GDL+S + + T L L +T+L +A+ S H +HRD++ ++
Sbjct: 91 GGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGH----TVLHRDLKPAN 146
Query: 671 ILLDDKFEVRLGSL 684
+ LD K V+LG
Sbjct: 147 VFLDGKQNVKLGDF 160
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 542 IKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHC 598
+ G G+++RG+ G + V I S +++ E + ++ V H ++ +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKI----FSSRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 599 MEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
M N + +L+ Y +G L L R Q+L+ L++A+ AA GL++LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQR--------QTLEPHLALRLAVSAACGLAHLHV 123
Query: 656 EC-----TLPFVHRDVQASSILLDDKFEVRLGS--LSEVCAQGGD 693
E HRD ++ ++L+ + + L+ + +QG D
Sbjct: 124 EIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSD 168
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE-- 628
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK +
Sbjct: 84 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKAEADLD 142
Query: 629 -DDLQSLDWITRLKIAIGAAEGLSYLHHE-CTLPFVHRDVQASSILLDDKFEVRLGSL 684
+D + L+ L + A+G+++L + C +HRDV A ++LL + ++G
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDF 196
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + + +V ++ L L+ + T+ +++ L + IA A G+ Y
Sbjct: 84 LFMGYSTK--PQLAIVTQWCEGSSLYHHLH-ASETKFEMKKL-----IDIARQTARGMDY 135
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
LH + +HRD+++++I L + V++G
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDF 164
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 15/163 (9%)
Query: 527 QQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRI-----DLQSVKTEAYLLELD 581
+Q+ DF +I G G++ L+ V +I L+ +T + E D
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
++ + L + + +N +LV Y GDL + L + + + + ++ +
Sbjct: 127 VLVN-GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
IAI + L Y VHRD++ +IL+D +RL
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADF 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 125
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 126 -----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 178 TRGGKIP 184
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE-- 628
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK +
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKAEADLD 150
Query: 629 -DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+D + L+ L + A+G+++L + +HRDV A ++LL + ++G
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDF 204
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 52 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 106
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 107 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 155
Query: 687 VCAQG 691
+C +G
Sbjct: 156 MCKEG 160
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 36 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 95 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 152
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 153 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 205 TRGGKIP 211
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 95 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 149
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 150 LPEEHARF-YSAEISLA------LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYG- 198
Query: 687 VCAQG 691
+C +G
Sbjct: 199 MCKEG 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V +YM NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 48 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 102
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 103 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 151
Query: 687 VCAQG 691
+C +G
Sbjct: 152 MCKEG 156
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 11/143 (7%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNG 615
E I ++ KR ++ K E D S++ H V L C + + + + Y NG
Sbjct: 64 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNG 122
Query: 616 DLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDD 675
+L + RK + D+ TR A L YLH + +HRD++ +ILL++
Sbjct: 123 ELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLNE 172
Query: 676 KFEVRLGSLSEVCAQGGDAHQSR 698
+++ ++ Q+R
Sbjct: 173 DMHIQITDFGTAKVLSPESKQAR 195
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 70/152 (46%), Gaps = 12/152 (7%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLV 592
G + I +G G +++G G + V + + + + +A+ E+ K H ++
Sbjct: 24 GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
+G+ + +V ++ L L+ + T+ +++ L + IA A G+ Y
Sbjct: 84 LFMGYSTA--PQLAIVTQWCEGSSLYHHLH-ASETKFEMKKL-----IDIARQTARGMDY 135
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
LH + +HRD+++++I L + V++G
Sbjct: 136 LHAKS---IIHRDLKSNNIFLHEDNTVKIGDF 164
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
D+ V+TE ++ F + S+ + L C + E+ F V +Y+ GDL + R+
Sbjct: 63 DIDWVQTEKHV-----FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK 117
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++ + + +A L+YLH ++RD++ ++LLD + ++L
Sbjct: 118 LPEEHARF-YSAEISLA------LNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYG- 166
Query: 687 VCAQG 691
+C +G
Sbjct: 167 MCKEG 171
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + + ++ +++ +Y+ G L + D+ Q T LK + +GL Y
Sbjct: 85 KYYGSYL-KGSKLWIIMEYLGGGSALDLL--RAGPFDEFQI---ATMLKEIL---KGLDY 135
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRIT 700
LH E +HRD++A+++LL ++ +V+L V Q D R T
Sbjct: 136 LHSEKK---IHRDIKAANVLLSEQGDVKLADFG-VAGQLTDTQIKRNT 179
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 32/159 (20%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHAR 590
G F A L+K+ G + VIK I+ + S + E E+ + + H
Sbjct: 35 GSFGKAILVKSTEDGRQY----------VIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDL-----QSLDWITRLKIAIG 645
+V E ++V Y GDL +++ N + + Q LDW ++ +A
Sbjct: 85 IVQYR-ESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQEDQILDWFVQICLA-- 137
Query: 646 AAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L ++H L HRD+++ +I L V+LG
Sbjct: 138 ----LKHVHDRKIL---HRDIKSQNIFLTKDGTVQLGDF 169
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 83/218 (38%), Gaps = 34/218 (15%)
Query: 129 LPGSIPDWLGQQLPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXX 188
+P +IP + LDL+S +S + + LT L LYL+DN L T+P
Sbjct: 31 IPSNIP-------ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFK 82
Query: 189 XXXXXXXXXXXXXXTGNIPTS-FGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSN 247
+P F L NL+ L + N L P +L+KL YL++
Sbjct: 83 ELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142
Query: 248 NSLASSIPAQXXXXXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNLF 307
N L S+P L SL++ + NN L + F
Sbjct: 143 NEL-QSLPKGV-----------------------FDKLTSLKELRLYNNQLK-RVPEGAF 177
Query: 308 PTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
+++L+ + L N P S+ +L++L + N
Sbjct: 178 DKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Query: 606 FLVYKYMPNGDLSSSLYRKTN-TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHR 664
FLV+ M G+L L K +E + +S I E +S+LH VHR
Sbjct: 176 FLVFDLMRKGELFDYLTEKVALSEKETRS--------IMRSLLEAVSFLHANN---IVHR 224
Query: 665 DVQASSILLDDKFEVRLGSLSEVC 688
D++ +ILLDD ++RL C
Sbjct: 225 DLKPENILLDDNMQIRLSDFGFSC 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G++ L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 157
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G++ L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 24/169 (14%)
Query: 530 LAATGDFSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
L DF + ++ G G + R L+ IK+I K L E+ + ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRY-YAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 588 HARLVPLLGHCMEREN------------EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
H +V +ER N F+ +Y NG +LY ++E+ Q D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENG----TLYDLIHSENLNQQRD 116
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
RL I E LSY+H + +HRD++ +I +D+ V++G
Sbjct: 117 EYWRLFRQI--LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDF 160
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 104
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 105 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 156
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 157 SK---RFVHRDIAARNVLVSSNDCVKLGDF 183
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + ++ + +++ +Y+ G L + LD I +GL Y
Sbjct: 69 KYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRIT 700
LH E +HRD++A+++LL + EV+L V Q D R T
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQIKRNT 163
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 4/206 (1%)
Query: 145 QALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXXXXTG 204
Q + L IS V S + NLT L+L N L G
Sbjct: 34 QRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLR 93
Query: 205 NI-PTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXX 263
+ PT+F L +L +L + L P L+ LQYL + +N+L ++P
Sbjct: 94 VVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNL-QALPDNTFRDLG 152
Query: 264 XXXXXXXXXXXXGSVPSE-LRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNG 322
SVP RGL SL + ++ N ++ + + F + +L + L N
Sbjct: 153 NLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVA-RVHPHAFRDLGRLMTLYLFANN 211
Query: 323 FTGPPPDVLWSMPQLRLLDISRNNFT 348
+ P +VL + L+ L ++ N +
Sbjct: 212 LSMLPAEVLVPLRSLQYLRLNDNPWV 237
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 81
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 82 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 133
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 134 SK---RFVHRDIAARNVLVSSNDCVKLGDF 160
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + ++ + +++ +Y+ G L + LD I +GL Y
Sbjct: 84 KYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDY 134
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
LH E +HRD++A+++LL + EV+L V Q D R
Sbjct: 135 LHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQIKR 176
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 79
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 80 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 131
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 132 SK---RFVHRDIAARNVLVSSNDCVKLGDF 158
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 78
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 79 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 130
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 131 SK---RFVHRDIAARNVLVSSNDCVKLGDF 157
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
++F + ++L G F L + +GDL+ + V+ K + LQ E + E
Sbjct: 23 DNFEFIRVLG-KGSFGKVMLARVKETGDLY------AVKVLKKDVILQDDDVECTMTEKR 75
Query: 582 FFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLK 641
S + + L C + + F V +++ GDL + +K+ D+ ++ + +
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEII 134
Query: 642 IAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQG 691
A L +LH + ++RD++ ++LLD + +L +C +G
Sbjct: 135 SA------LMFLHDKGI---IYRDLKLDNVLLDHEGHCKLADFG-MCKEG 174
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 536 FSDANLIKNGHSGDLFRGILEGGIPVV-IKRIDLQSVKTEAYLL--ELDFFSKVSHARLV 592
F+ I G G++F+GI VV IK IDL+ + E + E+ S+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 593 PLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSY 652
G + ++ + +++ +Y+ G L + LD I +GL Y
Sbjct: 69 KYYGSYL-KDTKLWIIMEYLGGGSALDLL--------EPGPLDETQIATILREILKGLDY 119
Query: 653 LHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
LH E +HRD++A+++LL + EV+L V Q D R
Sbjct: 120 LHSEKK---IHRDIKAANVLLSEHGEVKLADFG-VAGQLTDTQIKR 161
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 25/136 (18%)
Query: 560 PVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
P + R D Q E + + + H +V G C + + +V++YM +GDL+
Sbjct: 56 PTLAARKDFQR--------EAELLTNLQHEHIVKFYGVCGD-GDPLIMVFEYMKHGDLNK 106
Query: 620 SLYRKTNTEDDLQSLDWITR-----------LKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
L + + D + +D R L IA A G+ YL + FVHRD+
Sbjct: 107 FL--RAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLAT 161
Query: 669 SSILLDDKFEVRLGSL 684
+ L+ V++G
Sbjct: 162 RNCLVGANLLVKIGDF 177
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ + L + + EN +LV Y GDL + L + + + + +I + +AI +
Sbjct: 133 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694
L Y VHRD++ ++LLD +RL D
Sbjct: 193 QLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 9/106 (8%)
Query: 589 ARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ + L + + EN +LV Y GDL + L + + + + +I + +AI +
Sbjct: 149 CQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDA 694
L Y VHRD++ ++LLD +RL D
Sbjct: 209 QLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG 245
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 532 ATGDFSDANLIKNGHSGDLF-RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR 590
TG F +LI++ H+G + +L+ I V +K++ + E +L S V+H
Sbjct: 15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQV--EHTNDERLML-----SIVTHPF 67
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
++ + G + + F++ Y+ G+L S L + + + A L
Sbjct: 68 IIRMWG-TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-------YAAEVCLAL 119
Query: 651 SYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
YLH + ++RD++ +ILLD +++
Sbjct: 120 EYLHSK---DIIYRDLKPENILLDKNGHIKI 147
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVC 688
L A LSY H + +HRD++ ++LL E+++ C
Sbjct: 117 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSC 157
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 73
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 74 IG--VITENPVWIIMELCTLGELRSFLQVRK------YSLDLASLILYAYQLSTALAYLE 125
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 126 SK---RFVHRDIAARNVLVSSNDCVKLGDF 152
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C E +V++YM +GDL+ L R + L +
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDV 150
Query: 634 ----LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L +A A G+ YL L FVHRD+ + L+ V++G
Sbjct: 151 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDF 202
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 29 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 85 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 176
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 20 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 75
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 76 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 134
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 135 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 167
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 548 GDLFRGILEGGIP------VVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCM 599
G +++G L G P V IK + ++ E + E +++ H +V LLG +
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG-VV 98
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKT------NTEDD------LQSLDWITRLKIAIGAA 647
++ +++ Y +GDL L ++ +T+DD L+ D++ + A
Sbjct: 99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV---HLVAQIA 155
Query: 648 EGLSYL--HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G+ YL HH VH+D+ ++L+ DK V++ L
Sbjct: 156 AGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDL 189
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 548 GDLFRGILEGGIP------VVIKRIDLQSVK--TEAYLLELDFFSKVSHARLVPLLGHCM 599
G +++G L G P V IK + ++ E + E +++ H +V LLG +
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLG-VV 81
Query: 600 ERENEKFLVYKYMPNGDLSSSLYRKT------NTEDD------LQSLDWITRLKIAIGAA 647
++ +++ Y +GDL L ++ +T+DD L+ D++ + A
Sbjct: 82 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV---HLVAQIA 138
Query: 648 EGLSYL--HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G+ YL HH VH+D+ ++L+ DK V++ L
Sbjct: 139 AGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDL 172
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 541 LIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLELDFFSKVSHARLVPL 594
+I G G++ G L+ +PV IK ++ + +L E + H ++ L
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
G + + +V +YM NG L + L +K + + + L + R G + G+ YL
Sbjct: 89 EG-VVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLR-----GISAGMKYL- 140
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLP 706
+ +VHRD+ A +IL++ ++ D + TR ++P
Sbjct: 141 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRK------ 624
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKRPPGLE 150
Query: 625 ------TNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFE 678
N E+ L S D L + A+G+++L + +HRDV A ++LL +
Sbjct: 151 YSYNPSHNPEEQLSSRD---LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHV 204
Query: 679 VRLGSL 684
++G
Sbjct: 205 AKIGDF 210
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 30/112 (26%)
Query: 287 SLQKFVIGNNFL----SGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLR---- 338
SL++ +G N L L ++F +S LQ++ L N PP V + LR
Sbjct: 452 SLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSL 511
Query: 339 ------------------LLDISRNNFTGPLPNSRSNVNTSTVELNISQNMF 372
+LDISRN P P +V S L+I+ N F
Sbjct: 512 NSNRLTVLSHNDLPANLEILDISRNQLLAPNP----DVFVSLSVLDITHNKF 559
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 28 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 84 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 175
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 160
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 161 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 209
Query: 680 RLGSLSEVCAQ 690
+L CAQ
Sbjct: 210 KLSDFG-FCAQ 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 25/162 (15%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKT-EAYLLELDFFS 584
+ +++ GDF +N E + K ID +S + E Y++E+D +
Sbjct: 13 FWEIIGELGDFGKVYKAQNK----------ETSVLAAAKVIDTKSEEELEDYMVEIDILA 62
Query: 585 KVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKI 642
H +V LL EN +++ ++ G + + + + TE +Q +
Sbjct: 63 SCDHPNIVKLLD-AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------V 113
Query: 643 AIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ L+YLH +HRD++A +IL +++L
Sbjct: 114 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADF 152
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 567 DLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTN 626
DL +KTE ++ + H + L H +E N+ F+V +Y P G+L +
Sbjct: 51 DLPRIKTE-----IEALKNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYII---- 100
Query: 627 TEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSE 686
++D L + + + A ++Y+H + + HRD++ ++L D+ +++L
Sbjct: 101 SQDRLSEEETRVVFRQIVSA---VAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG- 153
Query: 687 VCAQ 690
+CA+
Sbjct: 154 LCAK 157
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 22 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 78 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 137 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 169
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 26 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 81
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 82 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 140
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 141 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 173
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 237
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 238 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 286
Query: 680 RLGSLSEVCAQ 690
+L CAQ
Sbjct: 287 KLSDFG-FCAQ 296
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 76
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 77 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 128
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDF 155
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 29 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 84
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 85 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 143
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 144 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 176
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C E +V++YM +GDL+ L R + L +
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDV 121
Query: 634 ----LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L +A A G+ YL L FVHRD+ + L+ V++G
Sbjct: 122 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDF 173
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 23/150 (15%)
Query: 535 DFSDANLIKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARL 591
D + + G G+++RG +G + V I S +++ E + ++ V H +
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVKI----FSSRDEKSWFRETELYNTVMLRHENI 64
Query: 592 VPLLGHCMEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
+ + M + + +L+ Y G L L L +LD ++ L+I + A
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIAS 116
Query: 649 GLSYLHHEC-----TLPFVHRDVQASSILL 673
GL++LH E HRD+++ +IL+
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 57 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 112
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 113 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 171
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 172 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 204
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 14/115 (12%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQS----- 633
E + + + H +V G C E +V++YM +GDL+ L R + L +
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDV 127
Query: 634 ----LDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L L +A A G+ YL L FVHRD+ + L+ V++G
Sbjct: 128 APGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDF 179
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 28 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 83
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 84 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 142
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 143 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 175
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 35 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 91 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 149
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 150 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 182
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 16/151 (10%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G FS+ ++K +G ++ + ++ K L+ + + E D R +
Sbjct: 72 GAFSEVAVVKMKQTGQVY------AMKIMNKWDMLKRGEVSCFREERDVLVN-GDRRWIT 124
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + EN +LV +Y GDL + L + + ++ + +AI + L Y
Sbjct: 125 QLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY- 183
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
VHRD++ +ILLD +RL
Sbjct: 184 --------VHRDIKPDNILLDRCGHIRLADF 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 117
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 118 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 166
Query: 680 RLGSLSEVCAQ 690
+L CAQ
Sbjct: 167 KLSDFG-FCAQ 176
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 35 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 90
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSL--YRKTNTEDDLQSLDWITRL-KIAIGAAE 648
V LLG + + ++ + M GDL S L R + + + ++++ ++A A+
Sbjct: 91 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 150 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 182
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHC 598
+ G G+++RG +G + V I S +++ E + ++ V H ++ +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKI----FSSRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 599 MEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
M + + +L+ Y G L L L +LD ++ L+I + A GL++LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHI 152
Query: 656 EC-----TLPFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 153 EIFGTQGKPAIAHRDLKSKNILV 175
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 25 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 80
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSSSL--YRKTNTEDDLQSLDWITRL-KIAIGAAE 648
V LLG + + ++ + M GDL S L R + + + ++++ ++A A+
Sbjct: 81 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 139
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + ++ + F V++G
Sbjct: 140 GMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF 172
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 115
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 116 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 164
Query: 680 RLGSLSEVCAQ 690
+L CAQ
Sbjct: 165 KLSDFG-FCAQ 174
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 110
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 111 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 159
Query: 680 RLGSLSEVCAQ 690
+L CAQ
Sbjct: 160 KLSDFG-FCAQ 169
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 561 VVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSS 619
V +K++DL+ + L E+ H +V + + +E ++V +++ G L+
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLEGGALTD 106
Query: 620 SLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEV 679
+ E+ + + + + + LS LH + +HRD+++ SILL V
Sbjct: 107 IVTHTRMNEEQIAA--------VCLAVLQALSVLHAQGV---IHRDIKSDSILLTHDGRV 155
Query: 680 RLGSLSEVCAQ 690
+L CAQ
Sbjct: 156 KLSDFG-FCAQ 165
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V + M NG L S L RK + + + L + R
Sbjct: 68 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLR 125
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 126 -----GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 178 TRGGKIP 184
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEG-GIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHC 598
+ G G+++RG +G + V I S +++ E + ++ V H ++ +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKI----FSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 599 MEREN---EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
M + + +L+ Y G L L L +LD ++ L+I + A GL++LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAHLHI 123
Query: 656 EC-----TLPFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILV 146
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E + K ID +S + E Y++E+D + H +V LL
Sbjct: 47 DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYY 105
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
EN +++ ++ G + + + + TE +Q + + L+YLH
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------VCKQTLDALNYLHDN--- 154
Query: 660 PFVHRDVQASSILLDDKFEVRLGSL 684
+HRD++A +IL +++L
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADF 179
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E + K ID +S + E Y++E+D + H +V LL
Sbjct: 47 DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYY 105
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
EN +++ ++ G + + + + TE +Q + + L+YLH
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------VCKQTLDALNYLHDN--- 154
Query: 660 PFVHRDVQASSILLDDKFEVRLGSL 684
+HRD++A +IL +++L
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADF 179
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 17/187 (9%)
Query: 526 YQQLLAATGDFSDANLIKNGHSGDLFRGILE----GGIPVVIK--RIDLQSVKTEAYLLE 579
+ + L AT + S ++ G G++ G L+ I V IK ++ + +L E
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 580 LDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITR 639
+ H ++ L G + + +V + M NG L S L RK + + + L + R
Sbjct: 97 ASIMGQFDHPNIIRLEG-VVTKSKPVMIVTEXMENGSLDSFL-RKHDAQFTVIQLVGMLR 154
Query: 640 LKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
G A G+ YL + +VHRD+ A +IL++ ++ D +
Sbjct: 155 -----GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 700 TRLLRLP 706
TR ++P
Sbjct: 207 TRGGKIP 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-STRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADF 152
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E G K I+ +S + E Y++E++ + H +V LLG
Sbjct: 21 DGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AYYH 79
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
+ + +++ ++ P G + + + + TE +Q + E L++LH +
Sbjct: 80 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--------VCRQMLEALNFLHSK--- 128
Query: 660 PFVHRDVQASSILLDDKFEVRLGSL 684
+HRD++A ++L+ + ++RL
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADF 153
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 456
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 457 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 508
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDF 535
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E + K ID +S + E Y++E+D + H +V LL
Sbjct: 47 DGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD-AFYY 105
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
EN +++ ++ G + + + + TE +Q + + L+YLH
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQV--------VCKQTLDALNYLHDN--- 154
Query: 660 PFVHRDVQASSILLDDKFEVRLGSL 684
+HRD++A +IL +++L
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADF 179
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 155
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 141
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 142 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 178
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|1JCN|A Chain A, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
pdb|1JCN|B Chain B, Binary Complex Of Human Type-I Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp
Length = 514
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 616 DLSSSLYRKTNTEDDLQS--LDWITRLKIAIGAA--EGLSYLHHECTLPFVHRDVQ 667
DL+S+L RK + L S +D +T +AI A G+ ++HH CT F +V+
Sbjct: 50 DLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVR 105
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 170 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 119
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 120 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 156
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANF 155
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 117
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++ +
Sbjct: 118 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIANF 154
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 69/145 (47%), Gaps = 16/145 (11%)
Query: 544 NGHSGDLFRGI-LEGGIPVVIKRIDLQSVKT-EAYLLELDFFSKVSHARLVPLLGHCMER 601
+G G +++ E G K I+ +S + E Y++E++ + H +V LLG
Sbjct: 29 DGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG-AYYH 87
Query: 602 ENEKFLVYKYMPNGDLSSSLYR--KTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTL 659
+ + +++ ++ P G + + + + TE +Q + E L++LH +
Sbjct: 88 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV--------VCRQMLEALNFLHSK--- 136
Query: 660 PFVHRDVQASSILLDDKFEVRLGSL 684
+HRD++A ++L+ + ++RL
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADF 161
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E D +I
Sbjct: 91 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA--------RIIRQV 141
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 142 LSGITYMHKN---KIVHRDLKPENLLLESK 168
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 648 EGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
+GL YLH E +HRD++A+++LL ++ +V+L V Q D R
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFG-VAGQLTDTQIKR 173
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 155
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 155
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 120
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 121 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 157
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 114
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 115 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 151
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
Query: 577 LLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDW 636
L E KV+ +R V L + E ++ LV M GDL +Y
Sbjct: 232 LNEKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA--------G 282
Query: 637 ITRLKIAIGAAE---GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ AAE GL LH E V+RD++ +ILLDD +R+ L
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 146
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 117
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 118 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 154
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 141
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 142 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 178
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 117 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 153
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 116
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 117 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 153
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 19/150 (12%)
Query: 542 IKNGHSGDLFRGILEG----GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPL 594
I G GD+ +GI + V IK SV+ E +L E + H +V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR-EKFLQEALTMRQFDHPHIVKL 456
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
+G + EN +++ + G+L S L + SLD + + A + L+YL
Sbjct: 457 IG--VITENPVWIIMELCTLGELRSFLQVRKF------SLDLASLILYAYQLSTALAYLE 508
Query: 655 HECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ FVHRD+ A ++L+ V+LG
Sbjct: 509 SK---RFVHRDIAARNVLVSATDCVKLGDF 535
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 541 LIKNGHSGDLFRGILE--GGIPVVIKRIDLQSVKTEA----YLLELDFFSKVSHARLVPL 594
+I G G++ G L+ G + + L+S TE +L E + H ++ L
Sbjct: 40 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL 99
Query: 595 LGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLH 654
G + + ++ ++M NG L S L R+ + + + L + R G A G+ YL
Sbjct: 100 EG-VVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLR-----GIAAGMKYL- 151
Query: 655 HECTLPFVHRDVQASSILLD 674
+ +VHRD+ A +IL++
Sbjct: 152 --ADMNYVHRDLAARNILVN 169
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 132
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 133 EL------ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADF 169
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 530 LAATGDFSDANLIKNGHSGDLF--RGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
L DF + ++ G G + R L+ IK+I K L E+ + ++
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRY-YAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 588 HARLVPLLGHCMEREN------------EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
H +V +ER N F+ +Y N +LY ++E+ Q D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCEN----RTLYDLIHSENLNQQRD 116
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
RL I E LSY+H + +HRD++ +I +D+ V++G
Sbjct: 117 EYWRLFRQI--LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDF 160
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 112
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 113 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 149
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 135 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 173
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 115
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 116 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 152
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 127 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 165
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+S+N+ S
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 508
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 111 NLASLENFPI--GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 544 NGHSGDLFRGILEGGIPVVIK-----RIDLQSVKTEAYLLE-LDFFSKVSHAR------L 591
G G ++ G+ +G V+K R+ +++V A + E ++F ++ S + +
Sbjct: 22 QGSFGMVYEGVAKG----VVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV 77
Query: 592 VPLLGHCMERENEKFLVYKYMPNGDLSS---SLYRKTNTEDDLQSLDWITRLKIAIGAAE 648
V LLG + + ++ + M GDL S SL + L +++A A+
Sbjct: 78 VRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIAD 136
Query: 649 GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
G++YL+ FVHRD+ A + + + F V++G
Sbjct: 137 GMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDF 169
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 146
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 522 ESFTYQQLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELD 581
E F + ++L G FS L + + E I ++ KR ++ K E D
Sbjct: 10 EDFKFGKILGE-GSFSTVVLARELATSR------EYAIKILEKRHIIKENKVPYVTRERD 62
Query: 582 FFSKVSHARLVPLLGHCMERENEK-FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRL 640
S++ H V L + +++EK + Y NG+L + RK + D+ TR
Sbjct: 63 VMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDET-----CTRF 114
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSR 698
A L YLH + +HRD++ +ILL++ +++ ++ Q+R
Sbjct: 115 YTA-EIVSALEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 15/109 (13%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E KV+ +R V L + E ++ LV M GDL +Y
Sbjct: 234 EKQILEKVN-SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQA--------GFP 284
Query: 639 RLKIAIGAAE---GLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ AAE GL LH E V+RD++ +ILLDD +R+ L
Sbjct: 285 EARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 146
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 146
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 108 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 146
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 155
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+++N L S
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS 508
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 111 NLASLENFPI--GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 36 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 93
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 94 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 143
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 144 EDMHIQITDFGTAKVLSPESKQAR 167
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I +GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 111 KVSIAVIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKL 149
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+S+N+ S
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 532
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 134
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 135 NLASLENFPI--GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E+ S + H LV L E +NE ++Y++M G+L + + N + ++++++
Sbjct: 204 EIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 262
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
++ +GL ++H +VH D++ +I+ K
Sbjct: 263 QV------CKGLCHMHENN---YVHLDLKPENIMFTTK 291
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT 118
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 119 EL------ANALSYCHSKRV---IHRDIKPENLLLGSAGELKIADF 155
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 282 LRGLRSLQKFVI-GNNFLSGNLS-VNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRL 339
L GL+ L+ + GN+F G++S NL V L+I++L + +
Sbjct: 444 LAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNH 503
Query: 340 LDISRNNFTGPLPNSRSNVNTSTVELNISQN---MFYGGLTPVLGRFRLVDLSGN----- 391
LD+S N+ TG ++ S++ + LN++ N + L P L + +++LS N
Sbjct: 504 LDLSHNSLTGDSMDALSHL--KGLYLNMASNNIRIIPPHLLPALSQQSIINLSHNPLDCT 561
Query: 392 ----YFEGRVPEYVHSNASSLDSNC 412
+F E +H S ++ C
Sbjct: 562 CSNIHFITWYKENLHKLEDSEETTC 586
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 26/202 (12%)
Query: 208 TSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSL-------ASSIPAQXXX 260
++F + LD+++ +L G +P G+ ++ L+ L ++ NS A+S P+
Sbjct: 271 STFRCFTRVQELDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDL 329
Query: 261 XXXXXXXXXXXXXXXGSVPSELRGLRSLQKFVIGNNFLSGNLSVNL-FPTVSQLQIIVLR 319
L L +LQK + ++ + + NL + LQ + L
Sbjct: 330 YIKGNMRKLDLGTRC------LEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLS 383
Query: 320 QNGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNSRSN-------VNTSTVELNISQNMF 372
N G PQL LLD++ + P+S +N S L+ S
Sbjct: 384 YNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHL 443
Query: 373 YGGLTPVLGRFRLVDLSGNYFE 394
GL + R ++L GN F+
Sbjct: 444 LAGLQDL----RHLNLQGNSFQ 461
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT 119
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 120 EL------ANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADF 156
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 522 ESFTYQQLLAATGDFSDANLIK--NGH-SGDLFRGILEGGIPVVIKRIDLQSVKTEAYLL 578
E+F ++L TG + L++ +GH +G L+ + +V K + +TE +L
Sbjct: 54 ENFELLKVLG-TGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 579 ELDFFSKVSHARLVPLL---GHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
E H R P L + + E + L+ Y+ G+L + L ++
Sbjct: 113 E--------HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--------- 155
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
T ++ I E + L H L ++RD++ +ILLD
Sbjct: 156 -FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD 193
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 62 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 119
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 120 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 169
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 170 EDMHIQITDFGTAKVLSPESKQAR 193
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT--- 627
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKAEAMLG 135
Query: 628 -------------EDDLQSLDWITRLKIAIGAAEGLSYLHHE-CTLPFVHRDVQASSILL 673
++D + L+ L + A+G+++L + C +HRDV A ++LL
Sbjct: 136 PSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLL 191
Query: 674 DDKFEVRLGSL 684
+ ++G
Sbjct: 192 TNGHVAKIGDF 202
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 117
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 118 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 167
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQAR 191
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 206 IPTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLAS 252
+P F L+NL+ LD+S L P +LS LQ LN+S+N+ S
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS 213
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 60 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 117
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 118 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 167
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 168 EDMHIQITDFGTAKVLSPESKQAR 191
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 34 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 91
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 92 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 141
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 142 EDMHIQITDFGTAKVLSPESKQAR 165
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQAR 188
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ L G+ + +L+ +Y P G + L +K + D+ ++ +IT
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHD-ATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT 119
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A LSY H + +HRD++ ++LL E+++
Sbjct: 120 EL------ANALSYCHSKRV---IHRDIKPENLLLGSNGELKIADF 156
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 35 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 92
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 93 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 142
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 143 EDMHIQITDFGTAKVLSPESKQAR 166
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQAR 188
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQAR 190
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQAR 188
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 278 VPSELRGLRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQL 337
VP EL + L + NN +S LS F ++QL ++L N PP + L
Sbjct: 46 VPKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSL 104
Query: 338 RLLDISRNNFTGPLPNSRSNVNTSTVELNISQNMFY 373
RLL + N+ + +P N ++ L I N Y
Sbjct: 105 RLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPLY 139
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 57 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 114
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 115 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 164
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 165 EDMHIQITDFGTAKVLSPESKQAR 188
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQAR 190
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 37 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 92
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 144
Query: 656 ECT-----LPFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILV 167
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E + +I
Sbjct: 108 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--------VDAARIIRQV 158
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 159 LSGITYMHKN---KIVHRDLKPENLLLESK 185
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E + +I
Sbjct: 109 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--------VDAARIIRQV 159
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 160 LSGITYMHKN---KIVHRDLKPENLLLESK 186
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSL 684
+A ++LLD +++
Sbjct: 140 KAENLLLDADMNIKIADF 157
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 50 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 105
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 157
Query: 656 ECT-----LPFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILV 180
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 17 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 72
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 124
Query: 656 ECTL-----PFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILV 147
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 113
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 114 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 163
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQAR 187
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 56 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 113
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 114 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 163
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 164 EDMHIQITDFGTAKVLSPESKQAR 187
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSL 684
+A ++LLD +++
Sbjct: 140 KAENLLLDADMNIKIADF 157
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 25 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 82
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPF-VHRD 665
LV +Y G++ D L + W+ + + +S + + C F VHRD
Sbjct: 83 LVMEYASGGEVF----------DYLVAHGWMKEKEARAKFRQIVSAVQY-CHQKFIVHRD 131
Query: 666 VQASSILLDDKFEVRLGSL 684
++A ++LLD +++
Sbjct: 132 LKAENLLLDADMNIKIADF 150
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 41 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 98
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G+L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 99 GELLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKGI---IHRDLKPENILLN 148
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 149 EDMHIQITDFGTAKVLSPESKQAR 172
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 12 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 67
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 119
Query: 656 ECT-----LPFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILV 142
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K++I GL+YL + + +HRDV+ S+IL++ + E++L
Sbjct: 118 KVSIAVLRGLAYLREKHQI--MHRDVKPSNILVNSRGEIKL 156
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H ++ L E + +LV + G+L + RK +E + +I
Sbjct: 85 HPNIMKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--------VDAARIIRQV 135
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y+H VHRD++ ++LL+ K
Sbjct: 136 LSGITYMHKN---KIVHRDLKPENLLLESK 162
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E+ S + H LV L E +NE ++Y++M G+L + + N + ++++++
Sbjct: 98 EIQTMSVLRHPTLVNLHD-AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR 156
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
++ +GL ++H +VH D++ +I+ K
Sbjct: 157 QV------CKGLCHMHENN---YVHLDLKPENIMFTTK 185
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSL 684
+A ++LLD +++
Sbjct: 140 KAENLLLDADMNIKIADF 157
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 14 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 69
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 121
Query: 656 ECTL-----PFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILV 144
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 542 IKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKV--SHARLVPLLGHCM 599
I G G+++RG G V +K S + ++ E + + V H ++ +
Sbjct: 11 IGKGRFGEVWRGKWRGE-EVAVK--IFSSREERSWFREAEIYQTVMLRHENILGFIA-AD 66
Query: 600 EREN----EKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHH 655
++N + +LV Y +G L L R T T + + +K+A+ A GL++LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--------IKLALSTASGLAHLHM 118
Query: 656 ECT-----LPFVHRDVQASSILL 673
E HRD+++ +IL+
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILV 141
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 16/133 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 618 SSSLYRKTN------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQA 668
S+ L K N T +DL D++T + + A+G+ +L + +HRD+ A
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAA 176
Query: 669 SSILLDDKFEVRL 681
+ILL +K V++
Sbjct: 177 RNILLSEKNVVKI 189
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 51 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 111 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 53 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 112
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 113 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 52 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 111
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 112 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|1JR1|A Chain A, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
pdb|1JR1|B Chain B, Crystal Structure Of Inosine Monophosphate Dehydrogenase
In Complex With Mycophenolic Acid
Length = 514
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 616 DLSSSLYRKTNTEDDLQS--LDWITRLKIAIGAA--EGLSYLHHECTLPFVHRDVQASSI 671
DL+S+L +K + L S +D +T +AI A G+ ++HH CT F QA+ +
Sbjct: 50 DLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPEF-----QANEV 104
Query: 672 LLDDKFE 678
K+E
Sbjct: 105 RKVKKYE 111
>pdb|1B3O|A Chain A, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1B3O|B Chain B, Ternary Complex Of Human Type-Ii Inosine Monophosphate
Dehydrogenase With 6-Cl-Imp And Selenazole Adenine
Dinucleotide
pdb|1NF7|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NF7|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With Ribavirin Monophosphate And C2-
Mycophenolic Adenine Dinucleotide
pdb|1NFB|A Chain A, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
pdb|1NFB|B Chain B, Ternary Complex Of The Human Type Ii Inosine Monophosphate
Dedhydrogenase With 6cl-Imp And Nad
Length = 514
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 616 DLSSSLYRKTNTEDDLQS--LDWITRLKIAIGAA--EGLSYLHHECTLPFVHRDVQASSI 671
DL+S+L +K + L S +D +T +AI A G+ ++HH CT F QA+ +
Sbjct: 50 DLTSALTKKITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPEF-----QANEV 104
Query: 672 LLDDKFE 678
K+E
Sbjct: 105 RKVKKYE 111
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 53 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVALET 112
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 113 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 165
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTI--PXXXXXXXXXXXXXXX 198
P LQ LDL C I + + +L++L++L L+ N +
Sbjct: 52 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 111
Query: 199 XXXXTGNIPTSFGLLKNLSSLDISSNYLTG-SIPPGLGTLSKLQYLNVSNNSLAS 252
N P G LK L L+++ N + +P L+ L++L++S+N + S
Sbjct: 112 NLASLENFP--IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 164
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT-ED 629
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK+ E
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 630 D----LQSLDWITR--LKIAIGAAEGLSYLHHE-CTLPFVHRDVQASSILLDDKFEVRLG 682
D + + TR L + A+G+++L + C +HRDV A ++LL + ++G
Sbjct: 151 DPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 206
Query: 683 SL 684
Sbjct: 207 DF 208
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 576 YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
+L E + H ++ L G + + ++ +YM NG L + L RK + + L
Sbjct: 56 FLSEASIMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLV 113
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
+ R G G+ YL + +VHRD+ A +IL++ ++ D
Sbjct: 114 GMLR-----GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 165
Query: 696 QSRITRLLRLP 706
+ TR ++P
Sbjct: 166 AAYTTRGGKIP 176
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 10/131 (7%)
Query: 576 YLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLD 635
+L E + H ++ L G + + ++ +YM NG L + L RK + + L
Sbjct: 62 FLSEASIMGQFDHPNIIHLEG-VVTKCKPVMIITEYMENGSLDAFL-RKNDGRFTVIQLV 119
Query: 636 WITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAH 695
+ R G G+ YL + +VHRD+ A +IL++ ++ D
Sbjct: 120 GMLR-----GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 171
Query: 696 QSRITRLLRLP 706
+ TR ++P
Sbjct: 172 AAYTTRGGKIP 182
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTNTEDDLQSL--DWIT---RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSIL 672
S+ L K N + L D++T + + A+G+ +L + +HRD+ A +IL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 673 LDDKFEVRL 681
L +K V++
Sbjct: 177 LSEKNVVKI 185
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 603 NEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAA-EGLSYLHHECTLPF 661
+E +++Y+YM N + + + I +K I + SY+H+E +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI-- 173
Query: 662 VHRDVQASSILLDDKFEVRLGSLSE 686
HRDV+ S+IL+D V+L E
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGE 198
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 572 KTEAYLLELDFFSKV-SHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNT-ED 629
+ EA + EL S + H +V LLG C ++ +Y GDL + L RK+ E
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACT-HGGPVLVITEYCCYGDLLNFLRRKSRVLET 150
Query: 630 D----LQSLDWITR--LKIAIGAAEGLSYLHHE-CTLPFVHRDVQASSILLDDKFEVRLG 682
D + + TR L + A+G+++L + C +HRDV A ++LL + ++G
Sbjct: 151 DPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIG 206
Query: 683 SL 684
Sbjct: 207 DF 208
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 550 LFRGILEGGIPVV--IKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607
L R IL G V I + L S + E+ ++H +V L +E E +L
Sbjct: 32 LARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLYL 90
Query: 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQ 667
V +Y G++ L ++ + + + + A + Y H + VHRD++
Sbjct: 91 VMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLK 140
Query: 668 ASSILLDDKFEVRLGSL 684
A ++LLD +++
Sbjct: 141 AENLLLDADMNIKIADF 157
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ + + +R+ +L+ ++ P G+L L +K D+ +S ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 121
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A+ L Y H +HRD++ ++L+ K E+++
Sbjct: 122 EL------ADALHYCHERKV---IHRDIKPENLLMGYKGELKIADF 158
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ + + +R+ +L+ ++ P G+L L +K D+ +S ++
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 122
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A+ L Y H +HRD++ ++L+ K E+++
Sbjct: 123 EL------ADALHYCHERKV---IHRDIKPENLLMGYKGELKIADF 159
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 618 SSSLYRKTN-----TEDDLQSLDWIT---RLKIAIGAAEGLSYLHHECTLPFVHRDVQAS 669
S+ L K N +DL D++T + + A+G+ +L + +HRD+ A
Sbjct: 122 STYLRSKRNEFVPYKPEDLYK-DFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAAR 177
Query: 670 SILLDDKFEVRL 681
+ILL +K V++
Sbjct: 178 NILLSEKNVVKI 189
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 550 LFRGILEGGIPVV--IKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFL 607
L R IL G V I + L S + E+ ++H +V L +E E +L
Sbjct: 32 LARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF-EVIETEKTLYL 90
Query: 608 VYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQ 667
V +Y G++ L ++ + + + + A + Y H + VHRD++
Sbjct: 91 VMEYASGGEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKF---IVHRDLK 140
Query: 668 ASSILLDDKFEVRLGSL 684
A ++LLD +++
Sbjct: 141 AENLLLDADMNIKIADF 157
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTNTEDDLQSL--DWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQASSIL 672
S+ L K N + L D++T + + A+G+ +L + +HRD+ A +IL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNIL 176
Query: 673 LDDKFEVRL 681
L +K V++
Sbjct: 177 LSEKNVVKI 185
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
E++ S + H ++ + + +R+ +L+ ++ P G+L L +K D+ +S ++
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKR-IYLMLEFAPRGELYKEL-QKHGRFDEQRSATFME 121
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L A+ L Y H +HRD++ ++L+ K E+++
Sbjct: 122 EL------ADALHYCHERKV---IHRDIKPENLLMGYKGELKIADF 158
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL 681
K+ + + L YL + + +HRDV+ S+ILLD++ +++L
Sbjct: 128 KMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKL 166
>pdb|3UX3|A Chain A, Crystal Structure Of Domain-Swapped Fam96a Minor Dimer
pdb|3UX3|B Chain B, Crystal Structure Of Domain-Swapped Fam96a Minor Dimer
Length = 130
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 566 IDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKT 625
+++Q + E YL+ + F V H L L+G C+ + ++ L +K+ +S +
Sbjct: 40 VEVQEINEEEYLVIIRFTPTVPHCSLATLIGLCLRVKLQRCLPFKHKLEIYISEGTH--- 96
Query: 626 NTEDDL 631
+TE+D+
Sbjct: 97 STEEDI 102
>pdb|3UX2|A Chain A, Crystal Structure Of Domain-Swapped Fam96a Major Dimer
Length = 130
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 566 IDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKT 625
+++Q + E YL+ + F V H L L+G C+ + ++ L +K+ +S +
Sbjct: 40 VEVQEINEEEYLVIIRFTPTVPHCSLATLIGLCLRVKLQRCLPFKHKLEIYISEGTH--- 96
Query: 626 NTEDDL 631
+TE+D+
Sbjct: 97 STEEDI 102
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
VI + ++ T L E++ K+ H ++ L +E + ++V + G+L +
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKLF-EILEDSSSFYIVGELYTGGELFDEI 112
Query: 622 Y-RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
RK +E D +I G++Y+H VHRD++ +ILL+ K
Sbjct: 113 IKRKRFSEHDAA--------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 287 SLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRNN 346
++QK +G N + L ++F V L ++VL +N + P + + P+L L +S NN
Sbjct: 100 TIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158
Query: 347 FTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNAS 406
+ + TS L +S N R VDLS +P H+N S
Sbjct: 159 LER-IEDDTFQATTSLQNLQLSSN-----------RLTHVDLSL------IPSLFHANVS 200
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 24/201 (11%)
Query: 208 TSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNNSLASSIPAQXXXXXXXXXX 267
T+F L LD+++ +L G +P G+ L+ L+ L +S N Q
Sbjct: 269 TTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFD-----QLCQISAANFP 322
Query: 268 XXXXXXXXGSVPSE------LRGLRSLQKFVIGNNFLSGNLSVNL-FPTVSQLQIIVLRQ 320
G+V L L +LQ + +N + + +L +S LQ + L
Sbjct: 323 SLTHLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSH 382
Query: 321 NGFTGPPPDVLWSMPQLRLLDISRNNFTGPLPNS-------RSNVNTSTVELNISQNMFY 373
N G PQL LLD++ P S +N + L+ S
Sbjct: 383 NEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLL 442
Query: 374 GGLTPVLGRFRLVDLSGNYFE 394
GL PVL R ++L GN+F+
Sbjct: 443 AGL-PVL---RHLNLKGNHFQ 459
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 286 RSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISRN 345
++QK +G N + L ++F V L ++VL +N + P + + P+L L +S N
Sbjct: 93 HTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 151
Query: 346 NFTGPLPNSRSNVNTSTVELNISQNMFYGGLTPVLGRFRLVDLSGNYFEGRVPEYVHSNA 405
N + + TS L +S N R VDLS +P H+N
Sbjct: 152 NLER-IEDDTFQATTSLQNLQLSSN-----------RLTHVDLS------LIPSLFHANV 193
Query: 406 S 406
S
Sbjct: 194 S 194
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
VI + ++ T L E++ K+ H ++ L +E + ++V + G+L +
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKLF-EILEDSSSFYIVGELYTGGELFDEI 112
Query: 622 Y-RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
RK +E D +I G++Y+H VHRD++ +ILL+ K
Sbjct: 113 IKRKRFSEHDAA--------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 562 VIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSL 621
VI + ++ T L E++ K+ H ++ L +E + ++V + G+L +
Sbjct: 54 VINKASAKNKDTSTILREVELLKKLDHPNIMKLF-EILEDSSSFYIVGELYTGGELFDEI 112
Query: 622 Y-RKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
RK +E D +I G++Y+H VHRD++ +ILL+ K
Sbjct: 113 IKRKRFSEHDAA--------RIIKQVFSGITYMHKH---NIVHRDLKPENILLESK 157
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 556 EGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEK-FLVYKYMPN 614
E I ++ KR ++ K E D S++ H V L + +++EK + Y N
Sbjct: 59 EYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL--YFTFQDDEKLYFGLSYAKN 116
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G L + RK + D+ TR A L YLH + +HRD++ +ILL+
Sbjct: 117 GCLLKYI-RKIGSFDET-----CTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLN 166
Query: 675 DKFEVRLGSLSEVCAQGGDAHQSR 698
+ +++ ++ Q+R
Sbjct: 167 EDMHIQITDFGTAKVLSPESKQAR 190
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KIA+ + L +LH + L +HRDV+ S++L++ +V++ G L + A+ DA
Sbjct: 157 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 532 ATGDFSDANLIKNGHSGDLFR-GILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR 590
TG F L+K+ +G+ + IL+ V +K+I E L E V+
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-------EHTLNEKRILQAVNFPF 102
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
LV L + N ++V +YMP GD+ S L R+ + + + ++ +
Sbjct: 103 LVKLEFSFKDNSN-LYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLT------F 154
Query: 651 SYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YLH +L ++RD++ ++L+D + +++
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADF 185
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 579 ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWIT 638
EL + H LV L + + E + F+V + GDL L + + +++ L +I
Sbjct: 65 ELQIMQGLEHPFLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-FIC 122
Query: 639 RLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSLS 685
L +A L YL ++ +HRD++ +ILLD+ V + +
Sbjct: 123 ELVMA------LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFN 160
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 532 ATGDFSDANLIKNGHSGDLFR-GILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHAR 590
TG F L+K+ +G+ + IL+ V +K+I E L E V+
Sbjct: 50 GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-------EHTLNEKRILQAVNFPF 102
Query: 591 LVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGL 650
LV L + N ++V +YMP GD+ S L R+ + + + ++ +
Sbjct: 103 LVKLEFSFKDNSN-LYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLT------F 154
Query: 651 SYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
YLH +L ++RD++ ++L+D + +++
Sbjct: 155 EYLH---SLDLIYRDLKPENLLIDQQGYIKVADF 185
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 55 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 111
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 112 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 159
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V IK ID L + E+ ++H +V L +E E +
Sbjct: 33 LARHILTGR-EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLY 90
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
L+ +Y G++ L ++ + ++ + + A + Y H + VHRD+
Sbjct: 91 LIMEYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDL 140
Query: 667 QASSILLDDKFEVRLGSL 684
+A ++LLD +++
Sbjct: 141 KAENLLLDADMNIKIADF 158
>pdb|2BNH|A Chain A, Porcine Ribonuclease Inhibitor
pdb|1DFJ|I Chain I, Ribonuclease Inhibitor Complexed With Ribonuclease A
Length = 457
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 6/47 (12%)
Query: 138 GQQLPT--LQALDLRSCSIS----GVIPFSLGNLTNLTSLYLSDNGL 178
G Q PT +Q L L++CS++ GV+P +L +L L L+LSDN L
Sbjct: 75 GLQSPTCKIQKLSLQNCSLTEAGCGVLPSTLRSLPTLRELHLSDNPL 121
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 117
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 118 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V +K ID L S + E+ ++H +V L +E E +
Sbjct: 32 LARHILTGK-EVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF-EVIETEKTLY 89
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
LV +Y G++ L ++ + + + + A + Y H + VHRD+
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEK----EARAKFRQIVSAVQ---YCHQKF---IVHRDL 139
Query: 667 QASSILLDDKFEVRLGSL 684
+A ++LLD +++
Sbjct: 140 KAENLLLDADXNIKIADF 157
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 61 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 117
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 118 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 165
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 55 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 111
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 112 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 159
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 8/60 (13%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KIA+ + L +LH + L +HRDV+ S++L++ +V++ G L + A+ DA
Sbjct: 113 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 107
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 108 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 155
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 569 QSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTE 628
Q + ++ E++ + H L+ L G + + +V + P G L L RK
Sbjct: 51 QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLLDRL-RKHQGH 107
Query: 629 DDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
L +L + A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 108 FLLGTLS-----RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 155
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRL------GSLSEVCAQGGDA 694
KI + + L++L L +HRD++ S+ILLD ++L G L + A+ DA
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 695 HQSRITRLLRL-PQSSEQG 712
R+ P +S QG
Sbjct: 187 GCRPYMAPERIDPSASRQG 205
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 15/138 (10%)
Query: 550 LFRGILEGGIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKF 606
L R IL G V IK ID L + E+ ++H +V L +E E +
Sbjct: 30 LARHILTGR-EVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLY 87
Query: 607 LVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDV 666
L+ +Y G++ L ++ + ++ + + A + Y H + VHRD+
Sbjct: 88 LIMEYASGGEVFDYLV----AHGRMKEKEARSKFRQIVSAVQ---YCHQK---RIVHRDL 137
Query: 667 QASSILLDDKFEVRLGSL 684
+A ++LLD +++
Sbjct: 138 KAENLLLDADMNIKIADF 155
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
+ A+ AEG+ YL + F+HRD+ A ++LL + V++G
Sbjct: 115 RYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDF 155
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 212
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 213 ARNILLSEKNVVKI 226
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 558 GIPVVIKRID---LQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPN 614
G V +K ID L + E+ ++H +V L +E E +LV +Y
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF-EVIETEKTLYLVMEYASG 98
Query: 615 GDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
G++ L ++ + + + + A + Y H + VHRD++A ++LLD
Sbjct: 99 GEVFDYLV----AHGRMKEKEARAKFRQIVSAVQ---YCHQKY---IVHRDLKAENLLLD 148
Query: 675 DKFEVRLGSL 684
+++
Sbjct: 149 GDMNIKIADF 158
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 606 FLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHEC-----TLP 660
+L+ Y NG L Y K+ T LD + LK+A + GL +LH E
Sbjct: 111 YLITDYHENGSLYD--YLKSTT------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA 162
Query: 661 FVHRDVQASSILL 673
HRD+++ +IL+
Sbjct: 163 IAHRDLKSKNILV 175
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 107 HLM-GADLNNIVKXQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 153
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ 707
S++ +++ E+++ + TR R P+
Sbjct: 154 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 192
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 19/150 (12%)
Query: 528 QLLAATGDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVS 587
Q + G F + L K+ +G E + V+ KR Q E+ L E+ ++
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQ------ECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 588 HARLVPLLGHCMERENEKFLVYKYMPNGDLSSSLY-RKTNTEDDLQSLDWITRLKIAIGA 646
H + L E + +LV + G+L + RK +E + +I
Sbjct: 85 HPNIXKLY-EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE--------VDAARIIRQV 135
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDK 676
G++Y H VHRD++ ++LL+ K
Sbjct: 136 LSGITYXHKN---KIVHRDLKPENLLLESK 162
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 285 LRSLQKFVIGNNFLSGNLSVNLFPTVSQLQIIVLRQNGFTGPPPDVLWSMPQLRLLDISR 344
L L K + N L+G + N F S +Q + L +N + + QL+ L++
Sbjct: 53 LPHLVKLELKRNQLTG-IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111
Query: 345 NNFTGPLPNSRSNVNTSTVELNISQNMF 372
N + +P S ++N+ T LN++ N F
Sbjct: 112 NQISCVMPGSFEHLNSLT-SLNLASNPF 138
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 176 ARNILLSEKNVVKI 189
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 617 LSSSLYRKTNTEDDLQS--LDWITRLKIAIGAAEGLSYLHHEC------TLPFV-HRDVQ 667
L ++ + K + D L++ + W IA A GL+YLH + P + HRD++
Sbjct: 99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIK 158
Query: 668 ASSILLDDKFEVRLGSLS-----EVCAQGGDAHQSRITRLLRLPQSSE 710
+ ++LL + + E GD H TR P+ E
Sbjct: 159 SKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 542 IKNGHSGDLF--RGILEGGIPVVIKRIDLQS---------VKTEAYLLELDFFSKVSHAR 590
I G G +F R + GG V +KR+ +Q+ ++ A L L+ F H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 591 LVPLLGHCM----ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+V L C +RE + LV++++ + DL++ L + +++ +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQL 129
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
GL +LH VHRD++ +IL+ +++L
Sbjct: 130 LRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADF 164
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 18/151 (11%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F + L+++ + ++ L + IKR D A+ E +++ V
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSD------SAFFWEERDIMAFANSPWVV 137
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + + + ++V +YMP GDL + + E W + A L +
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAEVVLA--LDAI 189
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
H ++ F+HRDV+ ++LLD ++L
Sbjct: 190 H---SMGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 18/151 (11%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F + L+++ + ++ L + IKR D A+ E +++ V
Sbjct: 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSD------SAFFWEERDIMAFANSPWVV 132
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + + + ++V +YMP GDL + + E W + A L +
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAEVVLA--LDAI 184
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
H ++ F+HRDV+ ++LLD ++L
Sbjct: 185 H---SMGFIHRDVKPDNMLLDKSGHLKLADF 212
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 122 STYLRSKRNEFVPYKEAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 177
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 178 ARNILLSEKNVVKI 191
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 176 ARNILLSEKNVVKI 189
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|3LUF|A Chain A, Structure Of Probable Two-Component System Response
RegulatorGGDEF DOMAIN PROTEIN
pdb|3LUF|B Chain B, Structure Of Probable Two-Component System Response
RegulatorGGDEF DOMAIN PROTEIN
pdb|3MF4|A Chain A, Crystal Structure Of Putative Two-Component System
Response RegulatorGGDEF DOMAIN PROTEIN
pdb|3MF4|B Chain B, Crystal Structure Of Putative Two-Component System
Response RegulatorGGDEF DOMAIN PROTEIN
Length = 259
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 547 SGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLE--LDFFSKVSHARLVPLLG 596
SG+ + +LE G+PVVI D+ K EA+L LD+ K S L +G
Sbjct: 63 SGEAVKVLLERGLPVVILTADISEDKREAWLEAGVLDYVXKDSRHSLQYAVG 114
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 175
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 176 ARNILLSEKNVVKI 189
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/133 (17%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 558 GIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGDL 617
I ++ K + +Q E ++E + + + L C + + + V +Y+ GDL
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL 107
Query: 618 SSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDKF 677
+ ++ + Q++ + + I GL +LH ++RD++ +++LD +
Sbjct: 108 MYHI-QQVGKFKEPQAVFYAAEISI------GLFFLHKRGI---IYRDLKLDNVMLDSEG 157
Query: 678 EVRLGSLSEVCAQ 690
+++ +C +
Sbjct: 158 HIKIADFG-MCKE 169
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 18/151 (11%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F + L+++ + ++ L + IKR D A+ E +++ V
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSD------SAFFWEERDIMAFANSPWVV 137
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
L + + + ++V +YMP GDL + + E W + A L +
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK------WARFYTAEVVLA--LDAI 189
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
H ++ F+HRDV+ ++LLD ++L
Sbjct: 190 H---SMGFIHRDVKPDNMLLDKSGHLKLADF 217
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 561 VVIKRIDLQSVKTE--AYLLELDFFSKVSHA-RLVPLLGHCMERENEKFLVYKYMPNGDL 617
V +K + + +E A + EL + H +V LLG C + ++ ++ G+L
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 618 SSSLYRKTN-------TEDDLQSLDWITRLKI---AIGAAEGLSYLHHECTLPFVHRDVQ 667
S+ L K N +DL D++T + + A+G+ +L + +HRD+
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYK-DFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLA 166
Query: 668 ASSILLDDKFEVRL 681
A +ILL +K V++
Sbjct: 167 ARNILLSEKNVVKI 180
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 14/134 (10%)
Query: 558 GIPVVIKRIDLQSVKTEAYLL-ELDFFSKVSHARLVPLLGHCMERENEKFLVYKYMPNGD 616
G V +K +DL+ + L E+ H +V + + E E +++ +++ G
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE-ELWVLMEFLQGGA 128
Query: 617 LSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYLHHECTLPFVHRDVQASSILLDDK 676
L+ + + E+ + + + + L+YLH + +HRD+++ SILL
Sbjct: 129 LTDIVSQVRLNEEQIAT--------VCEAVLQALAYLHAQGV---IHRDIKSDSILLTLD 177
Query: 677 FEVRLGSLSEVCAQ 690
V+L CAQ
Sbjct: 178 GRVKLSDFG-FCAQ 190
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 542 IKNGHSGDLF--RGILEGGIPVVIKRIDLQS---------VKTEAYLLELDFFSKVSHAR 590
I G G +F R + GG V +KR+ +Q+ ++ A L L+ F H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 591 LVPLLGHCM----ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+V L C +RE + LV++++ + DL++ L + +++ +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQL 129
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
GL +LH VHRD++ +IL+ +++L
Sbjct: 130 LRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADF 164
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 27/158 (17%)
Query: 542 IKNGHSGDLF--RGILEGGIPVVIKRIDLQS---------VKTEAYLLELDFFSKVSHAR 590
I G G +F R + GG V +KR+ +Q+ ++ A L L+ F H
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE---HPN 75
Query: 591 LVPLLGHCM----ERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGA 646
+V L C +RE + LV++++ + DL++ L + +++ +
Sbjct: 76 VVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIK-----DMMFQL 129
Query: 647 AEGLSYLHHECTLPFVHRDVQASSILLDDKFEVRLGSL 684
GL +LH VHRD++ +IL+ +++L
Sbjct: 130 LRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADF 164
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 118 HLM-GADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 164
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ 707
S++ +++ E+++ + TR R P+
Sbjct: 165 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 203
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 641 KIAIGAAEGLSYLHHECTLPFVHRDVQASSILLD 674
KIA+ + L +LH + L +HRDV+ S++L++
Sbjct: 140 KIAVSIVKALEHLHSK--LSVIHRDVKPSNVLIN 171
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 112 HLM-GADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 158
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ 707
S++ +++ E+++ + TR R P+
Sbjct: 159 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 558 GIPVVIKRID--LQSV-KTEAYLLELDFFSKVSHARLVPLL-----GHCMERENEKFLVY 609
G+ V +K++ QS+ + EL + H ++ LL +E N+ +LV
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 610 KYMPNGDLSSSLYRKTNTEDDLQSLDW-ITRLKIAIGAAEGLSYLHHECTLPFVHRDVQA 668
M DL++ + + T+D +Q L + I R GL Y+H + +HRD++
Sbjct: 112 HLM-GADLNNIVKCQKLTDDHVQFLIYQILR---------GLKYIH---SADIIHRDLKP 158
Query: 669 SSILLDDKFEVRLGSLSEVCAQGGDAHQSRITRLLRLPQ 707
S++ +++ E+++ + TR R P+
Sbjct: 159 SNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPE 197
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 210 FGLLKNLSSLDISSNYLTGSIPPGL-GTLSKLQYLNVSNNSLAS 252
F L+NL S++ SN L +P G+ G + KL+ LN+++N L S
Sbjct: 166 FDDLENLESIEFGSNKLR-QMPRGIFGKMPKLKQLNLASNQLKS 208
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 29.3 bits (64), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 141 LPTLQALDLRSCSISGVIPFSLGNLTNLTSLYLSDNGLTGTIPXXXXXXXXXXXXXXXXX 200
L LQ L L+ ++ + + +L NLT L+L N ++ ++P
Sbjct: 127 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQ 185
Query: 201 XXTGNI-PTSFGLLKNLSSLDISSNYLTGSIPPGLGTLSKLQYLNVSNN 248
++ P +F L L +L + +N L+ L L LQYL +++N
Sbjct: 186 NRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/166 (18%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 534 GDFSDANLIKNGHSGDLFRGILEGGIPVVIKRIDLQSVKTEAYLLELDFFSKVSHARLVP 593
G F+ I + + ++F G +V K + L+ + E +E+ ++H +V
Sbjct: 52 GGFAKCFEISDADTKEVFAG------KIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 594 LLGHCMERENEKFLVYKYMPNGDLSSSLYRKTNTEDDLQSLDWITRLKIAIGAAEGLSYL 653
G E + F+V + L L+++ + ++ ++ ++ + G YL
Sbjct: 106 FHGF-FEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL------GCQYL 157
Query: 654 HHECTLPFVHRDVQASSILLDDKFEVRLGSLSEVCAQGGDAHQSRI 699
H +HRD++ ++ L++ EV++G D + ++
Sbjct: 158 HRNRV---IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,264,530
Number of Sequences: 62578
Number of extensions: 706350
Number of successful extensions: 2323
Number of sequences better than 100.0: 534
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 460
Number of HSP's that attempted gapping in prelim test: 1801
Number of HSP's gapped (non-prelim): 723
length of query: 766
length of database: 14,973,337
effective HSP length: 106
effective length of query: 660
effective length of database: 8,340,069
effective search space: 5504445540
effective search space used: 5504445540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)